Cucsa.362080 (gene) Cucumber (Gy14) v1

NameCucsa.362080
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold03611 : 83782 .. 84857 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGCACCAAATCTAAATCTAAACTGGCTTGACAATCTCTATACCATCCTTCATCCCATCATACGATCAAAAGCAATGTCGTTAATAAATGAAAAAGTACAAAGAAAGCTAGAAAGAAACTCGAAAAGTTATGCATAGATTACAAAGACGCATGCCAGTTAAGTGATATAGAAGAAATTCTACCATTCAAACAAAATGAAAAGAAGGAAAAAAAaGTTCCCACCAAAAAGCTAGTAAATTTATTTTTTtGAACTTTTTAAAGTACTTTAGAAATACTTTTGATTTAAAGTATTTAGACAACAAACAAAAAAGTGAAGTAAGTATAGATTCCCATTTATCCATATAGGTGATGTATTGTCCCATTCATGCATAGTATAATAATTAATATTAGTTATCCATATGTGTATATATAGAGAAGAGATTTGGGTATTGGGCATCAGAAGTGTGTAATTAAGAAGACGAAAACCCATATTTACCATCTCTCTCGGTTAATAATGTCGTTTCTTCCTAAGTTTGCAGGATTCCAGAACCACACAGAAGGAAAGTACCTTCAATACCTTTCTGATGGTTTTCTTTTCGGTAACCTACAATACTCTTCTGATCAAGCTTTGACTCCATTTACAAAGTTCGAGATTGTGCCCGACAAGGATGGTAAATATTGGCACATAAAATGTTGCTACAACGACAAGTACTTGGCCTCTTCCAACGACCACAATCGCTTCGTTACTCCCTTCGTTAGCAAGCCGAGTGAAAACGAATCCTCATCGCCATGCACATTGTTTAATTTCATCCCTGGTCCTACTACAGGGACTTACTATTTATTTGATGTCTTGCTTCAAACCTATGCACGTCGATGTACCAGTAGCAGAATTCATCCCGATGTTCTCACAACTAGATATAGACGAGATGAAAAACGACACGACGACAAATTAGTTGTGCTAGTCGACTTTGAAAACATCATTCGACTCCCCAAATACCTCTCCTTTAAGAACAATGACAAGTTTCTCGCTGCCTATACGTATCGTAATTCCCCATATCTGCAGTTCAATGCCAACGACATTGGAAACCCTCAG

mRNA sequence

ATGGGTGCACCAAATCTAAATCTAAACTGGCTTGACAATCTCTATACCATCCTTCATCCCATCATACGATCAAAAGCAATGTCGTTAATAAATGAAAAATTCGAGATTGTGCCCGACAAGGATGGTAAATATTGGCACATAAAATGTTGCTACAACGACAAGTACTTGGCCTCTTCCAACGACCACAATCGCTTCGTTACTCCCTTCGTTAGCAAGCCGAGTGAAAACGAATCCTCATCGCCATGCACATTGTTTAATTTCATCCCTGGTCCTACTACAGGGACTTACTATTTATTTGATGTCTTGCTTCAAACCTATGCACGTCGATGTACCAGTAGCAGAATTCATCCCGATGTTCTCACAACTAGATATAGACGAGATGAAAAACGACACGACGACAAATTAGTTGTGCTAGTCGACTTTGAAAACATCATTCGACTCCCCAAATACCTCTCCTTTAAGAACAATGACAAGTTTCTCGCTGCCTATACGTATCGTAATTCCCCATATCTGCAGTTCAATGCCAACGACATTGGAAACCCTCAG

Coding sequence (CDS)

ATGGGTGCACCAAATCTAAATCTAAACTGGCTTGACAATCTCTATACCATCCTTCATCCCATCATACGATCAAAAGCAATGTCGTTAATAAATGAAAAATTCGAGATTGTGCCCGACAAGGATGGTAAATATTGGCACATAAAATGTTGCTACAACGACAAGTACTTGGCCTCTTCCAACGACCACAATCGCTTCGTTACTCCCTTCGTTAGCAAGCCGAGTGAAAACGAATCCTCATCGCCATGCACATTGTTTAATTTCATCCCTGGTCCTACTACAGGGACTTACTATTTATTTGATGTCTTGCTTCAAACCTATGCACGTCGATGTACCAGTAGCAGAATTCATCCCGATGTTCTCACAACTAGATATAGACGAGATGAAAAACGACACGACGACAAATTAGTTGTGCTAGTCGACTTTGAAAACATCATTCGACTCCCCAAATACCTCTCCTTTAAGAACAATGACAAGTTTCTCGCTGCCTATACGTATCGTAATTCCCCATATCTGCAGTTCAATGCCAACGACATTGGAAACCCTCAG

Protein sequence

MGAPNLNLNWLDNLYTILHPIIRSKAMSLINEKFEIVPDKDGKYWHIKCCYNDKYLASSNDHNRFVTPFVSKPSENESSSPCTLFNFIPGPTTGTYYLFDVLLQTYARRCTSSRIHPDVLTTRYRRDEKRHDDKLVVLVDFENIIRLPKYLSFKNNDKFLAAYTYRNSPYLQFNANDIGNPQ
BLAST of Cucsa.362080 vs. TrEMBL
Match: A0A0A0KEW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G082530 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 1.9e-83
Identity = 148/150 (98.67%), Postives = 148/150 (98.67%), Query Frame = 1

Query: 33  KFEIVPDKDGKYWHIKCCYNDKYLASSNDHNRFVTPFVSKPSENESSSPCTLFNFIPGPT 92
           KFEIVPDKDGKYWHIKCCYNDKYLASSNDHNRFVTPFVSKPSENESS PCTLFNFIPGPT
Sbjct: 44  KFEIVPDKDGKYWHIKCCYNDKYLASSNDHNRFVTPFVSKPSENESSWPCTLFNFIPGPT 103

Query: 93  TGTYYLFDVLLQTYARRCTSSRIHPDVLTTRYRRDEKRHDDKLVVLVDFENIIRLPKYLS 152
           TGTYYLFDVLLQTYARRCTSSRIHPDVLTTRYRRDEKRHDDKLVVLVDFENIIRLPKYLS
Sbjct: 104 TGTYYLFDVLLQTYARRCTSSRIHPDVLTTRYRRDEKRHDDKLVVLVDFENIIRLPKYLS 163

Query: 153 FKNNDKFLAAYTYRNSPYLQFNANDIGNPQ 183
           FKNNDKFLA YTYRNSPYLQFNANDIGNPQ
Sbjct: 164 FKNNDKFLATYTYRNSPYLQFNANDIGNPQ 193

BLAST of Cucsa.362080 vs. TrEMBL
Match: A0A0A0K970_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G082030 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 5.3e-65
Identity = 116/150 (77.33%), Postives = 134/150 (89.33%), Query Frame = 1

Query: 33  KFEIVPDKDGKYWHIKCCYNDKYLASSNDHNRFVTPFVSKPSENESSSPCTLFNFIPGPT 92
           KFEI PDK+GKYWHIKCCYN+KYLASSND+NRFV PFVSKPSEN++S PCTLFN I GPT
Sbjct: 44  KFEIEPDKNGKYWHIKCCYNNKYLASSNDYNRFVRPFVSKPSENDTSWPCTLFNIIQGPT 103

Query: 93  TGTYYLFDVLLQTYARRCTSSRIHPDVLTTRYRRDEKRHDDKLVVLVDFENIIRLPKYLS 152
            GTYYLFDVLLQTYA RCTS + HP+VLTTRY++DEK H DKL++LVDFENIIRLPKY++
Sbjct: 104 VGTYYLFDVLLQTYACRCTSCKNHPNVLTTRYKQDEKHHGDKLLLLVDFENIIRLPKYVT 163

Query: 153 FKNNDKFLAAYTYRNSPYLQFNANDIGNPQ 183
           FKN DKFLAAY Y  + YLQFNA+D+G+P+
Sbjct: 164 FKNGDKFLAAYPYNYTTYLQFNAHDVGDPR 193

BLAST of Cucsa.362080 vs. TrEMBL
Match: A0A0A0KA07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G083530 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.3e-63
Identity = 114/149 (76.51%), Postives = 128/149 (85.91%), Query Frame = 1

Query: 33  KFEIVPDKDGKYWHIKCCYNDKYLASSNDHNRFVTPFVSKPSENESSSPCTLFNFIPGPT 92
           KFEIVPDKDGKYWHIKCCYN KYLAS+ND NRFV PFVSKPSENESS PCTLFN IPGPT
Sbjct: 44  KFEIVPDKDGKYWHIKCCYNGKYLASTNDGNRFVAPFVSKPSENESSWPCTLFNIIPGPT 103

Query: 93  TGTYYLFDVLLQTYARRCTSSRIHPDVLTTRYRRDEKRHDDKLVVLVDFENIIRLPKYLS 152
            GTYYLFDV++ TYA RCT  R+H DVLTT Y  +E R  DKL++LVDFEN+IRLPKY++
Sbjct: 104 IGTYYLFDVMIYTYACRCTDRRVHHDVLTTIYNLEEARDSDKLILLVDFENVIRLPKYVA 163

Query: 153 FKNNDKFLAAYTYRNSPYLQFNANDIGNP 182
           FKNNDK LA+++Y NS YLQFN +DIGNP
Sbjct: 164 FKNNDKLLASFSYNNSMYLQFNTDDIGNP 192

BLAST of Cucsa.362080 vs. TrEMBL
Match: A0A0A0KEW7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G083560 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.3e-36
Identity = 79/156 (50.64%), Postives = 109/156 (69.87%), Query Frame = 1

Query: 26  AMSLINEKFEIVPDKDGKYWHIKCCYNDKYLASSNDHNRFVTPFVSKPSENESSSPCTLF 85
           AMS+ + KF +   K   Y+HI+CCYN+KY AS+ D +  V+PFVSKPSENE S PCTLF
Sbjct: 37  AMSMFS-KFTLEQSKTTNYFHIRCCYNNKYWASAKDGDHMVSPFVSKPSENEFSWPCTLF 96

Query: 86  NFIPGPTTGTYYLFDVLLQTYARRCTSSRIHPDVLTTRYRRDEKRHDDKLVVLVDFENII 145
            F+  PT GTYYLFDV  Q+Y  RCT+S+ H D LTTRY  ++  + D+  +L+DFE +I
Sbjct: 97  RFVQAPTEGTYYLFDVWRQSYVCRCTTSKSHEDCLTTRY-GNQDHYYDRTHILIDFETLI 156

Query: 146 RLPKYLSFKNNDK-FLAAYTYRNSPYLQFNANDIGN 181
            LPK++  K + K +L  Y Y  + +L+FN++DIG+
Sbjct: 157 VLPKHIVIKGDLKQYLCTYWYEENEHLKFNSDDIGS 190

BLAST of Cucsa.362080 vs. TrEMBL
Match: A0A067KSH6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10544 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.6e-11
Identity = 49/151 (32.45%), Postives = 75/151 (49.67%), Query Frame = 1

Query: 33  KFEIVPDKDGK---YWHIKCCYNDKYLASSNDHNRFVTPFVSKPSENESSSPCTLFNFIP 92
           KFE+   K G      HI+CCYN+KYL  S+  + ++     +P E++S   CTLF  + 
Sbjct: 51  KFELQYPKTGDADDLVHIRCCYNNKYLVRSSAEDDWIVGAADEPEEDKSKWSCTLFQLLS 110

Query: 93  GPTTGTYYLFDVLLQTYARRCTSSRIHPDVLTTRYRRDEKRHDDKLVVLVDFENIIRLPK 152
              T   Y    +   +  +  S + HP  L+     D        + LVD + ++ LP 
Sbjct: 111 SHHTTNGYTLRHVQTGFFVQTESFQSHPHCLSILPVGDID------IQLVDMDTLVTLPM 170

Query: 153 YLSFK-NNDKFLAAYTYRNSPYLQFNANDIG 180
           Y++FK +N K+L A+   N  Y QF A+DIG
Sbjct: 171 YIAFKGDNGKYLRAHMVNNHEYNQFAADDIG 195

BLAST of Cucsa.362080 vs. NCBI nr
Match: gi|778711447|ref|XP_011656733.1| (PREDICTED: uncharacterized protein LOC101208849 [Cucumis sativus])

HSP 1 Score: 320.9 bits (821), Expect = 1.5e-84
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1

Query: 33  KFEIVPDKDGKYWHIKCCYNDKYLASSNDHNRFVTPFVSKPSENESSSPCTLFNFIPGPT 92
           KFEIVPDKDGKYWHIKCCYNDKYLASSNDHNRFVTPFVSKPSENESSSPCTLFNFIPGPT
Sbjct: 44  KFEIVPDKDGKYWHIKCCYNDKYLASSNDHNRFVTPFVSKPSENESSSPCTLFNFIPGPT 103

Query: 93  TGTYYLFDVLLQTYARRCTSSRIHPDVLTTRYRRDEKRHDDKLVVLVDFENIIRLPKYLS 152
           TGTYYLFDVLLQTYARRCTSSRIHPDVLTTRYRRDEKRHDDKLVVLVDFENIIRLPKYLS
Sbjct: 104 TGTYYLFDVLLQTYARRCTSSRIHPDVLTTRYRRDEKRHDDKLVVLVDFENIIRLPKYLS 163

Query: 153 FKNNDKFLAAYTYRNSPYLQFNANDIGNPQ 183
           FKNNDKFLAAYTYRNSPYLQFNANDIGNPQ
Sbjct: 164 FKNNDKFLAAYTYRNSPYLQFNANDIGNPQ 193

BLAST of Cucsa.362080 vs. NCBI nr
Match: gi|778722035|ref|XP_004145086.2| (PREDICTED: uncharacterized protein LOC105434387 [Cucumis sativus])

HSP 1 Score: 316.6 bits (810), Expect = 2.8e-83
Identity = 148/150 (98.67%), Postives = 148/150 (98.67%), Query Frame = 1

Query: 33  KFEIVPDKDGKYWHIKCCYNDKYLASSNDHNRFVTPFVSKPSENESSSPCTLFNFIPGPT 92
           KFEIVPDKDGKYWHIKCCYNDKYLASSNDHNRFVTPFVSKPSENESS PCTLFNFIPGPT
Sbjct: 44  KFEIVPDKDGKYWHIKCCYNDKYLASSNDHNRFVTPFVSKPSENESSWPCTLFNFIPGPT 103

Query: 93  TGTYYLFDVLLQTYARRCTSSRIHPDVLTTRYRRDEKRHDDKLVVLVDFENIIRLPKYLS 152
           TGTYYLFDVLLQTYARRCTSSRIHPDVLTTRYRRDEKRHDDKLVVLVDFENIIRLPKYLS
Sbjct: 104 TGTYYLFDVLLQTYARRCTSSRIHPDVLTTRYRRDEKRHDDKLVVLVDFENIIRLPKYLS 163

Query: 153 FKNNDKFLAAYTYRNSPYLQFNANDIGNPQ 183
           FKNNDKFLA YTYRNSPYLQFNANDIGNPQ
Sbjct: 164 FKNNDKFLATYTYRNSPYLQFNANDIGNPQ 193

BLAST of Cucsa.362080 vs. NCBI nr
Match: gi|659120442|ref|XP_008460196.1| (PREDICTED: uncharacterized protein LOC103499081 [Cucumis melo])

HSP 1 Score: 293.5 bits (750), Expect = 2.5e-76
Identity = 136/149 (91.28%), Postives = 142/149 (95.30%), Query Frame = 1

Query: 33  KFEIVPDKDGKYWHIKCCYNDKYLASSNDHNRFVTPFVSKPSENESSSPCTLFNFIPGPT 92
           KFEIVPDKDGKYWHIKCCYNDKYLASS+DHNRFVTPFVSKPSENESS PCT+FN + GPT
Sbjct: 44  KFEIVPDKDGKYWHIKCCYNDKYLASSDDHNRFVTPFVSKPSENESSRPCTMFNIMSGPT 103

Query: 93  TGTYYLFDVLLQTYARRCTSSRIHPDVLTTRYRRDEKRHDDKLVVLVDFENIIRLPKYLS 152
           TGTYYLFDV LQTYARRCTSSRIHP+VLTTRYRRDE RHDDKLV+LVDFENIIRLPKYLS
Sbjct: 104 TGTYYLFDVSLQTYARRCTSSRIHPNVLTTRYRRDENRHDDKLVLLVDFENIIRLPKYLS 163

Query: 153 FKNNDKFLAAYTYRNSPYLQFNANDIGNP 182
           FKNNDKFLAA+TY NSPYLQFNA DIGNP
Sbjct: 164 FKNNDKFLAAHTYYNSPYLQFNATDIGNP 192

BLAST of Cucsa.362080 vs. NCBI nr
Match: gi|659120128|ref|XP_008460028.1| (PREDICTED: uncharacterized protein LOC103498965 [Cucumis melo])

HSP 1 Score: 289.3 bits (739), Expect = 4.8e-75
Identity = 134/149 (89.93%), Postives = 142/149 (95.30%), Query Frame = 1

Query: 33  KFEIVPDKDGKYWHIKCCYNDKYLASSNDHNRFVTPFVSKPSENESSSPCTLFNFIPGPT 92
           KFEIVPDKDGKYWHIKCCYNDKYLASS+DHNRFVTPFVSKPSENESS PCT+FN I GPT
Sbjct: 44  KFEIVPDKDGKYWHIKCCYNDKYLASSDDHNRFVTPFVSKPSENESSRPCTMFNIISGPT 103

Query: 93  TGTYYLFDVLLQTYARRCTSSRIHPDVLTTRYRRDEKRHDDKLVVLVDFENIIRLPKYLS 152
           TGTYYLFDV LQTYARRCTSSRIHP+VLTTRYRRDE RHDDKLV+LVDFENIIRLPKYLS
Sbjct: 104 TGTYYLFDVSLQTYARRCTSSRIHPNVLTTRYRRDENRHDDKLVLLVDFENIIRLPKYLS 163

Query: 153 FKNNDKFLAAYTYRNSPYLQFNANDIGNP 182
           FKNNDKFLAA+TY +SPYL+F A+DIGNP
Sbjct: 164 FKNNDKFLAAHTYYDSPYLKFKADDIGNP 192

BLAST of Cucsa.362080 vs. NCBI nr
Match: gi|778722033|ref|XP_004153114.2| (PREDICTED: uncharacterized protein LOC101207511 [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 7.6e-65
Identity = 116/150 (77.33%), Postives = 134/150 (89.33%), Query Frame = 1

Query: 33  KFEIVPDKDGKYWHIKCCYNDKYLASSNDHNRFVTPFVSKPSENESSSPCTLFNFIPGPT 92
           KFEI PDK+GKYWHIKCCYN+KYLASSND+NRFV PFVSKPSEN++S PCTLFN I GPT
Sbjct: 44  KFEIEPDKNGKYWHIKCCYNNKYLASSNDYNRFVRPFVSKPSENDTSWPCTLFNIIQGPT 103

Query: 93  TGTYYLFDVLLQTYARRCTSSRIHPDVLTTRYRRDEKRHDDKLVVLVDFENIIRLPKYLS 152
            GTYYLFDVLLQTYA RCTS + HP+VLTTRY++DEK H DKL++LVDFENIIRLPKY++
Sbjct: 104 VGTYYLFDVLLQTYACRCTSCKNHPNVLTTRYKQDEKHHGDKLLLLVDFENIIRLPKYVT 163

Query: 153 FKNNDKFLAAYTYRNSPYLQFNANDIGNPQ 183
           FKN DKFLAAY Y  + YLQFNA+D+G+P+
Sbjct: 164 FKNGDKFLAAYPYNYTTYLQFNAHDVGDPR 193

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KEW1_CUCSA1.9e-8398.67Uncharacterized protein OS=Cucumis sativus GN=Csa_6G082530 PE=4 SV=1[more]
A0A0A0K970_CUCSA5.3e-6577.33Uncharacterized protein OS=Cucumis sativus GN=Csa_6G082030 PE=4 SV=1[more]
A0A0A0KA07_CUCSA1.3e-6376.51Uncharacterized protein OS=Cucumis sativus GN=Csa_6G083530 PE=4 SV=1[more]
A0A0A0KEW7_CUCSA2.3e-3650.64Uncharacterized protein OS=Cucumis sativus GN=Csa_6G083560 PE=4 SV=1[more]
A0A067KSH6_JATCU2.6e-1132.45Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10544 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778711447|ref|XP_011656733.1|1.5e-84100.00PREDICTED: uncharacterized protein LOC101208849 [Cucumis sativus][more]
gi|778722035|ref|XP_004145086.2|2.8e-8398.67PREDICTED: uncharacterized protein LOC105434387 [Cucumis sativus][more]
gi|659120442|ref|XP_008460196.1|2.5e-7691.28PREDICTED: uncharacterized protein LOC103499081 [Cucumis melo][more]
gi|659120128|ref|XP_008460028.1|4.8e-7589.93PREDICTED: uncharacterized protein LOC103498965 [Cucumis melo][more]
gi|778722033|ref|XP_004153114.2|7.6e-6577.33PREDICTED: uncharacterized protein LOC101207511 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008998Agglutinin
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009405 pathogenesis
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.362080.1Cucsa.362080.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008998Agglutinin domainunknownSSF50382Agglutinincoord: 33..128
score: 1.7E-10coord: 142..181
score: 1.3
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 33..133
score: 1.7E-11coord: 147..181
score: 4.
NoneNo IPR availablePANTHERPTHR39244FAMILY NOT NAMEDcoord: 33..181
score: 4.3

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.362080MELO3C022436Melon (DHL92) v3.5.1cgymeB586
Cucsa.362080Bhi12G002203Wax gourdcgywgoB724
The following gene(s) are paralogous to this gene:

None