Cucsa.356900 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.356900
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Transposon Ty3-I Gag-Pol polyprotein
Location	scaffold03577 : 1814211 .. 1815476 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTACAAATGTTTGAAGGGTGAATTATATTGGGATGGTATCAAAAGGGATGTTAAAGAATATTGTGATGAGCGTTTGATTTGTCAACGGAACAAAACCTTGGCTTTGTCTCCAACCGGGTTATTAATGCCACTGGAAATTCCAGAGGTTGTGTGGAGTGATATATCTATGGATTTTATTGAAGGATTATCCAAAACGGCAGGATTCGAGGTAATTTTCGTCGCGGTGGATCAATTGAGTAAATATGCACATTTTATAGCATTAAATCACCCATACACTGCTAAATTGTGTTGTGGTTAGATTACATGGATATCCTAAGTACATTGTGTTAGATAGGTACAAGGTTTTCCTTATTAATTTTTGGAGATAGATGTTCAGATTATCTGGTACCAAACTCAATAGAAGCTCGGCATACCATCCTCAATCTGATTGACAAACAAAAGCTGTTAATCGGAGTGTAGAGGTTTATCTAGTTGTTTATGTGGTGAGAAGCCTAAGGAGTGGATTAATTGGCTATACTGGACTGAGTATTGGTATAATACCACGTATCAGAGGGCGATCGGAATTACACCATTTCAGGCTGTTTATGGCCGTGCACCACCGCCTTTGATCTCTTATGGGGAGGCTGAAACATCTAATTCCACCCTTGACCAGCATCTTAGGGAAAGAGGTGTAGCATTAGCAGCATTGAAGGAACATCTCAAATTGGCCTAGGAGAAAATGAAGAAGGCTGCTGATTCAAAACGAGGAGATGTAGAGTTCCAAGTTGGTGATTTAGTACTTTTGAAGCTTCGTCCATATTGAGAAGTGTCTTTGAGAAAGAAGAGAAATGAGAAGTTGTCTCCGTAGTAGTTTGGGCCATATATGTTGATTGCACAGATTGGGCAAATAGCTTATAAGCTGGAACTTCCACCAGCAGCTGCCATACACCCTGTATTTCATGTCTCTCAATTAAAGAAGGTGGTTGGAGAACATAAGGAAGTGCACCAGTTGATTCCTTATATTTTGGAAGGCCATGAATGGGTTACTACACCAGAAGAAGTGCTGGATTATCAAAAAAATCCTACAACAGGTGTGTGGGAAGTCCTGATCAGTTGGAAGGGTCTGTTGCCTCACAAAGCAATGTGGGAGAACTGTGATGATTTTCAGAAGCAATTTCCGACGGACAAGGTGGTTTTGGAGGGGGGAAGTAATGTTAGACCTCCGATATTATTTACTTATAGTAGGAGAAAGAAGAAGGAGAaGTCAACAGTGTATCTTTGA

mRNA sequence

atgacttacaaatgtttgaagggtgaattatattgggatggtatcaaaagggatgttaaagaatattgtgatgagcgtttgatttgtcaacggaacaaaaccttggctttgtctccaaccgggttattaatgccactggaaattccagaggttgtgtggagtgatatatctatggattttattgaaggattatccaaaacggcaggattcgaggtaattttcgtcgcggtggatcaattgagtaaatatgcacattttatagcattaaatcacccatacactgctaaATTGTGTTgtgcttataagctggaacttccaccagcagctgccatacaccctgtatttcatgtctctcaattaaagaaggtggttggagaacataaggaagtgcaccagttgattccttatattttggaaggccatgaatgggttactacaccagaagaagtgctggattatcaaaaaaaTCCTACAACAggtgtgtgggaagtcctgatcagttggaagggtctgttgcctcacaaagcaatgtgggagaactgtgatgattttcagaagcaatttccgacggacaaggtggttttggaggggggaagtaatgttagacctccgatattatttacttatagtaggagaaagaagaaGGAGAAGTCAACAGTGTATCTTTGA

Coding sequence (CDS)

ATGACTTACAAATGTTTGAAGGGTGAATTATATTGGGATGGTATCAAAAGGGATGTTAAAGAATATTGTGATGAGCGTTTGATTTGTCAACGGAACAAAACCTTGGCTTTGTCTCCAACCGGGTTATTAATGCCACTGGAAATTCCAGAGGTTGTGTGGAGTGATATATCTATGGATTTTATTGAAGGATTATCCAAAACGGCAGGATTCGAGGTAATTTTCGTCGCGGTGGATCAATTGAGTAAATATGCACATTTTATAGCATTAAATCACCCATACACTGCTAAATTGTGTTGTGCTTATAAGCTGGAACTTCCACCAGCAGCTGCCATACACCCTGTATTTCATGTCTCTCAATTAAAGAAGGTGGTTGGAGAACATAAGGAAGTGCACCAGTTGATTCCTTATATTTTGGAAGGCCATGAATGGGTTACTACACCAGAAGAAGTGCTGGATTATCAAAAAAATCCTACAACAGGTGTGTGGGAAGTCCTGATCAGTTGGAAGGGTCTGTTGCCTCACAAAGCAATGTGGGAGAACTGTGATGATTTTCAGAAGCAATTTCCGACGGACAAGGTGGTTTTGGAGGGGGGAAGTAATGTTAGACCTCCGATATTATTTACTTATAGTAGGAGAAAGAAGAAGGAGAaGTCAACAGTGTATCTTTGA

Protein sequence

MTYKCLKGELYWDGIKRDVKEYCDERLICQRNKTLALSPTGLLMPLEIPEVVWSDISMDFIEGLSKTAGFEVIFVAVDQLSKYAHFIALNHPYTAKLCCAYKLELPPAAAIHPVFHVSQLKKVVGEHKEVHQLIPYILEGHEWVTTPEEVLDYQKNPTTGVWEVLISWKGLLPHKAMWENCDDFQKQFPTDKVVLEGGSNVRPPILFTYSRRKKKEKSTVYL*

Homology

[Close]

BLAST of Cucsa.356900 vs. Swiss-Prot
Match: TF211_SCHPO (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 31/85 (36.47%), Postives = 46/85 (54.12%), Query Frame = 1


Query: 12   WDGIKRDVKEYCDERLICQRNKTLALSPTGLLMPLEIPEVVWSDISMDFIEGLSKTAGFE 71
            W GI++ ++EY      CQ NK+    P G L P+   E  W  +SMDFI  L +++G+ 
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 72   VIFVAVDQLSKYAHFIALNHPYTAK 97
             +FV VD+ SK A  +      TA+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAE 1027

[Close]

BLAST of Cucsa.356900 vs. Swiss-Prot
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 31/85 (36.47%), Postives = 46/85 (54.12%), Query Frame = 1


Query: 12   WDGIKRDVKEYCDERLICQRNKTLALSPTGLLMPLEIPEVVWSDISMDFIEGLSKTAGFE 71
            W GI++ ++EY      CQ NK+    P G L P+   E  W  +SMDFI  L +++G+ 
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 72   VIFVAVDQLSKYAHFIALNHPYTAK 97
             +FV VD+ SK A  +      TA+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAE 1027

[Close]

BLAST of Cucsa.356900 vs. Swiss-Prot
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 31/85 (36.47%), Postives = 46/85 (54.12%), Query Frame = 1


Query: 12   WDGIKRDVKEYCDERLICQRNKTLALSPTGLLMPLEIPEVVWSDISMDFIEGLSKTAGFE 71
            W GI++ ++EY      CQ NK+    P G L P+   E  W  +SMDFI  L +++G+ 
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 72   VIFVAVDQLSKYAHFIALNHPYTAK 97
             +FV VD+ SK A  +      TA+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAE 1027

[Close]

BLAST of Cucsa.356900 vs. Swiss-Prot
Match: TF22_SCHPO (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 31/85 (36.47%), Postives = 46/85 (54.12%), Query Frame = 1


Query: 12   WDGIKRDVKEYCDERLICQRNKTLALSPTGLLMPLEIPEVVWSDISMDFIEGLSKTAGFE 71
            W GI++ ++EY      CQ NK+    P G L P+   E  W  +SMDFI  L +++G+ 
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 72   VIFVAVDQLSKYAHFIALNHPYTAK 97
             +FV VD+ SK A  +      TA+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAE 1027

[Close]

BLAST of Cucsa.356900 vs. Swiss-Prot
Match: TF23_SCHPO (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 31/85 (36.47%), Postives = 46/85 (54.12%), Query Frame = 1


Query: 12   WDGIKRDVKEYCDERLICQRNKTLALSPTGLLMPLEIPEVVWSDISMDFIEGLSKTAGFE 71
            W GI++ ++EY      CQ NK+    P G L P+   E  W  +SMDFI  L +++G+ 
Sbjct: 943  WKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYN 1002

Query: 72   VIFVAVDQLSKYAHFIALNHPYTAK 97
             +FV VD+ SK A  +      TA+
Sbjct: 1003 ALFVVVDRFSKMAILVPCTKSITAE 1027

[Close]

BLAST of Cucsa.356900 vs. TrEMBL
Match: E5GC18_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.2e-27
Identity = 58/95 (61.05%), Postives = 73/95 (76.84%), Query Frame = 1


Query: 2   TYKCLKGELYWDGIKRDVKEYCDERLICQRNKTLALSPTGLLMPLEIPEVVWSDISMDFI 61
           TYK +  ELYW+G+K D+K Y D+  +CQ+NKT ALSP GLL PL IP  +W DISMDFI
Sbjct: 884 TYKRIAAELYWEGMKNDIKIYVDQCPVCQQNKTQALSPAGLLQPLPIPSRIWEDISMDFI 943

Query: 62  EGLSKTAGFEVIFVAVDQLSKYAHFIALNHPYTAK 97
           EGL ++  F+ + V VDQLSKYAHF+AL HP++AK
Sbjct: 944 EGLPRSRTFDSVLVVVDQLSKYAHFVALRHPFSAK 978

[Close]

BLAST of Cucsa.356900 vs. TrEMBL
Match: B4YF15_ANACO (Polyprotein (Fragment) OS=Ananas comosus PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 8.6e-25
Identity = 56/94 (59.57%), Postives = 72/94 (76.60%), Query Frame = 1


Query: 2   TYKCLKGELYWDGIKRDVKEYCDERLICQRNKTLALSPTGLLMPLEIPEVVWSDISMDFI 61
           T + LKG+ YW G++RDV+++  E  +CQ+NK    +P GLL PL IPE +W++ISMDFI
Sbjct: 726 TTRKLKGQFYWKGLRRDVEQFVRECSVCQQNKYETTAPAGLLQPLPIPEGIWTEISMDFI 785

Query: 62  EGLSKTAGFEVIFVAVDQLSKYAHFIALNHPYTA 96
           EGL  + G EVI V VD+LSKYAHFIAL+HPYTA
Sbjct: 786 EGLPNSQGKEVIMVVVDRLSKYAHFIALSHPYTA 819

[Close]

BLAST of Cucsa.356900 vs. TrEMBL
Match: A0A151QWC6_CAJCA (Retrovirus-related Pol polyprotein from transposon 297 family OS=Cajanus cajan GN=KK1_044479 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-24
Identity = 56/95 (58.95%), Postives = 68/95 (71.58%), Query Frame = 1


Query: 2   TYKCLKGELYWDGIKRDVKEYCDERLICQRNKTLALSPTGLLMPLEIPEVVWSDISMDFI 61
           TY+ L   LYW G+K+ V++Y     +CQR K  ALSP GLL PL+IP  +W D+SMDFI
Sbjct: 317 TYRRLAANLYWVGMKKHVQDYVQSCDVCQRQKYAALSPGGLLQPLDIPNQIWEDLSMDFI 376

Query: 62  EGLSKTAGFEVIFVAVDQLSKYAHFIALNHPYTAK 97
            GL K+ GFE I V VD+LSKYAHF+ L HPYTAK
Sbjct: 377 TGLPKSRGFEAILVVVDRLSKYAHFLPLKHPYTAK 411

[Close]

BLAST of Cucsa.356900 vs. TrEMBL
Match: A0A151QR50_CAJCA (Retrotransposable element Tf2 (Fragment) OS=Cajanus cajan GN=KK1_046431 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-24
Identity = 56/95 (58.95%), Postives = 68/95 (71.58%), Query Frame = 1


Query: 2   TYKCLKGELYWDGIKRDVKEYCDERLICQRNKTLALSPTGLLMPLEIPEVVWSDISMDFI 61
           TY+ L   LYW G+K+ V++Y     +CQR K  ALSP GLL PL+IP  +W D+SMDFI
Sbjct: 184 TYRRLAANLYWVGMKKHVQDYVQSCDVCQRQKYAALSPGGLLQPLDIPNQIWEDLSMDFI 243

Query: 62  EGLSKTAGFEVIFVAVDQLSKYAHFIALNHPYTAK 97
            GL K+ GFE I V VD+LSKYAHF+ L HPYTAK
Sbjct: 244 TGLPKSRGFEAILVVVDRLSKYAHFLPLKHPYTAK 278

[Close]

BLAST of Cucsa.356900 vs. TrEMBL
Match: E2DMZ5_BETVU (Putative uncharacterized protein OS=Beta vulgaris PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-24
Identity = 57/99 (57.58%), Postives = 68/99 (68.69%), Query Frame = 1


Query: 2    TYKCLKGELYWDGIKRDVKEYCDERLICQRNKTLALSPTGLLMPLEIPEVVWSDISMDFI 61
            TYK L GE YW G+K+DV  +     ICQ+ KT  LSP GLL PL IP  +W DISMDF+
Sbjct: 1124 TYKRLAGEWYWKGMKKDVTTFVQNCQICQQFKTSTLSPAGLLQPLPIPLAIWEDISMDFV 1183

Query: 62   EGLSKTAGFEVIFVAVDQLSKYAHFIALNHPYTAKLCCA 101
            EGL K+ G++ I V VD+LSKYAHFI L HP+TA    A
Sbjct: 1184 EGLPKSQGWDTILVVVDRLSKYAHFITLKHPFTAPTVAA 1222

[Close]

BLAST of Cucsa.356900 vs. NCBI nr
Match: gi|731390478|ref|XP_010650386.1| (PREDICTED: uncharacterized protein LOC100264062 [Vitis vinifera])

HSP 1 Score: 141.7 bits (356), Expect = 1.5e-30
Identity = 89/234 (38.03%), Postives = 116/234 (49.57%), Query Frame = 1


Query: 2    TYKCLKGELYWDGIKRDVKEYCDERLICQRNKTLALSPTGLLMPLEIPEVVWSDISMDFI 61
            T+K L  + YW  + + V+EY  +   CQ+ K+  + P GLL PL IP  VW DI++DFI
Sbjct: 1031 TFKKLAQQFYWPKMYQAVQEYIKKCETCQKVKSETMPPAGLLQPLPIPCQVWDDITLDFI 1090

Query: 62   EGLSKTAGFEVIFVAVDQLSKYAHFIALNHPYTAKLCC---------------------- 121
            EGL  + G + I V VD+LSK AHF+AL HP+TAK+                        
Sbjct: 1091 EGLPTSHGKDTILVVVDRLSKSAHFLALTHPFTAKIVAERQQTAFKRAHQKLASRFYGPY 1150

Query: 122  ---------AYKLELPPAAAIHPVFHVSQLKKVVGEHKEVHQLIPYILEGHEWVTTPEEV 181
                     AYKL+LP  A IHPVFHVS LK  VGE  E  Q +P + E    +  P+ +
Sbjct: 1151 PVIQKIGAVAYKLQLPEGARIHPVFHVSLLKNFVGELAEPSQELPPVNEEGAVILEPQHI 1210

Query: 182  LD--YQKNPTTGVWEVLISWKGLLPHKAMWENCDDFQKQFPT----DKVVLEGG 199
            L+  + K       E LI WK L      WE      ++FP     DK  L GG
Sbjct: 1211 LNTRWVKRGNKFEEENLIQWKHLPVEDTTWETTQSLLERFPPMDLGDKRPLHGG 1264

[Close]

BLAST of Cucsa.356900 vs. NCBI nr
Match: gi|307136175|gb|ADN34016.1| (ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 130.2 bits (326), Expect = 4.5e-27
Identity = 58/95 (61.05%), Postives = 73/95 (76.84%), Query Frame = 1


Query: 2   TYKCLKGELYWDGIKRDVKEYCDERLICQRNKTLALSPTGLLMPLEIPEVVWSDISMDFI 61
           TYK +  ELYW+G+K D+K Y D+  +CQ+NKT ALSP GLL PL IP  +W DISMDFI
Sbjct: 884 TYKRIAAELYWEGMKNDIKIYVDQCPVCQQNKTQALSPAGLLQPLPIPSRIWEDISMDFI 943

Query: 62  EGLSKTAGFEVIFVAVDQLSKYAHFIALNHPYTAK 97
           EGL ++  F+ + V VDQLSKYAHF+AL HP++AK
Sbjct: 944 EGLPRSRTFDSVLVVVDQLSKYAHFVALRHPFSAK 978

[Close]

BLAST of Cucsa.356900 vs. NCBI nr
Match: gi|659105263|ref|XP_008453052.1| (PREDICTED: uncharacterized protein LOC103493874 [Cucumis melo])

HSP 1 Score: 129.8 bits (325), Expect = 5.9e-27
Identity = 58/82 (70.73%), Postives = 70/82 (85.37%), Query Frame = 1


Query: 15 IKRDVKEYCDERLICQRNKTLALSPTGLLMPLEIPEVVWSDISMDFIEGLSKTAGFEVIF 74
          +K DVK++C+E L+CQRNKTLAL P GLL PLEIP+ VWSDISMDFI+GL K  GFEV+F
Sbjct: 1  MKADVKKHCEECLVCQRNKTLALPPAGLLTPLEIPQQVWSDISMDFIDGLPKAKGFEVVF 60

Query: 75 VAVDQLSKYAHFIALNHPYTAK 97
          V +D+LSKY+HF+AL HPYT K
Sbjct: 61 VVIDRLSKYSHFMALKHPYTTK 82

[Close]

BLAST of Cucsa.356900 vs. NCBI nr
Match: gi|659105263|ref|XP_008453052.1| (PREDICTED: uncharacterized protein LOC103493874 [Cucumis melo])

HSP 1 Score: 83.2 bits (204), Expect = 6.4e-13
Identity = 43/88 (48.86%), Postives = 54/88 (61.36%), Query Frame = 1


Query: 121 KKVVGEHKEVHQLIPYILEGHEWVTTPEEVLDYQKNPTTGVWEVLISWKGLLPHKAMWEN 180
           KK VG+   V   + +I E  EW   P+E L YQKN  TG WEVLI WK L  H+A+WE 
Sbjct: 215 KKFVGDRTGVQPTLQFINENLEWQAYPDEALKYQKN-NTGGWEVLIGWKDLPEHEALWEC 274

Query: 181 CDDFQKQFPT----DKVVLEGGSNVRPP 205
            ++ Q+ +PT    DK+ LEG  NVRPP
Sbjct: 275 YNEIQRLYPTFHLEDKMKLEGEGNVRPP 301

HSP 2 Score: 123.2 bits (308), Expect = 5.6e-25
Identity = 58/95 (61.05%), Postives = 71/95 (74.74%), Query Frame = 1


Query: 2   TYKCLKGELYWDGIKRDVKEYCDERLICQRNKTLALSPTGLLMPLEIPEVVWSDISMDFI 61
           TYK +  ELYW+G+K D+K+ C+  LICQ NK+LALSP GLL+P EI   VWSDISMDFI
Sbjct: 610 TYKRVASELYWEGMKFDMKKRCEACLICQHNKSLALSPAGLLVPQEILHQVWSDISMDFI 669

Query: 62  EGLSKTAGFEVIFVAVDQLSKYAHFIALNHPYTAK 97
            GL K  G +VI V VD+ S+Y+H +AL HPYT K
Sbjct: 670 NGLPKAKGCDVILVVVDRFSEYSHSLALKHPYTTK 704

[Close]

BLAST of Cucsa.356900 vs. NCBI nr
Match: gi|659113889|ref|XP_008456800.1| (PREDICTED: uncharacterized protein LOC103496640 [Cucumis melo])

HSP 1 Score: 52.8 bits (125), Expect = 9.2e-04
Identity = 24/43 (55.81%), Postives = 29/43 (67.44%), Query Frame = 1


Query: 100 AYKLELPPAAAIHPVFHVSQLKKVVGEHKEVHQLIPYILEGHE 143
           AYKLELP    IHPVFHVSQLKK VG+   V   + Y+ E ++
Sbjct: 820 AYKLELPAGVVIHPVFHVSQLKKFVGDQMGVLPTLQYVTENYD 862

HSP 2 Score: 32.7 bits (73), Expect = 9.9e+02
Identity = 19/39 (48.72%), Postives = 26/39 (66.67%), Query Frame = 1


Query: 170 GLLPH-KAMWENCDDFQKQFPT----DKVVLEGGSNVRP 204
           G+LP  + + EN D+ +K +P     DKV L+GGSNVRP
Sbjct: 849 GVLPTLQYVTENYDEMKKLYPNLHLEDKVNLKGGSNVRP 887

HSP 3 Score: 122.1 bits (305), Expect = 1.2e-24
Identity = 56/94 (59.57%), Postives = 72/94 (76.60%), Query Frame = 1


Query: 2   TYKCLKGELYWDGIKRDVKEYCDERLICQRNKTLALSPTGLLMPLEIPEVVWSDISMDFI 61
           T + LKG+ YW G++RDV+++  E  +CQ+NK    +P GLL PL IPE +W++ISMDFI
Sbjct: 726 TTRKLKGQFYWKGLRRDVEQFVRECSVCQQNKYETTAPAGLLQPLPIPEGIWTEISMDFI 785

Query: 62  EGLSKTAGFEVIFVAVDQLSKYAHFIALNHPYTA 96
           EGL  + G EVI V VD+LSKYAHFIAL+HPYTA
Sbjct: 786 EGLPNSQGKEVIMVVVDRLSKYAHFIALSHPYTA 819

The following BLAST results are available for this feature:

BLAST of Cucsa.356900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TF211_SCHPO	1.5e-09	36.47	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
TF212_SCHPO	1.5e-09	36.47	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
TF21_SCHPO	1.5e-09	36.47	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF22_SCHPO	1.5e-09	36.47	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF23_SCHPO	1.5e-09	36.47	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cucsa.356900 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GC18_CUCME	3.2e-27	61.05	Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
B4YF15_ANACO	8.6e-25	59.57	Polyprotein (Fragment) OS=Ananas comosus PE=4 SV=1	[more]
A0A151QWC6_CAJCA	1.1e-24	58.95	Retrovirus-related Pol polyprotein from transposon 297 family OS=Cajanus cajan G...	[more]
A0A151QR50_CAJCA	1.1e-24	58.95	Retrotransposable element Tf2 (Fragment) OS=Cajanus cajan GN=KK1_046431 PE=4 SV=...	[more]
E2DMZ5_BETVU	1.9e-24	57.58	Putative uncharacterized protein OS=Beta vulgaris PE=4 SV=1	[more]

BLAST of Cucsa.356900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|731390478\|ref\|XP_010650386.1\|	1.5e-30	38.03	PREDICTED: uncharacterized protein LOC100264062 [Vitis vinifera]	[more]
gi\|307136175\|gb\|ADN34016.1\|	4.5e-27	61.05	ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]	[more]
gi\|659105263\|ref\|XP_008453052.1\|	5.9e-27	70.73	PREDICTED: uncharacterized protein LOC103493874 [Cucumis melo]	[more]
gi\|659105263\|ref\|XP_008453052.1\|	6.4e-13	48.86	PREDICTED: uncharacterized protein LOC103493874 [Cucumis melo]	[more]
gi\|659113889\|ref\|XP_008456800.1\|	9.2e-04	55.81	PREDICTED: uncharacterized protein LOC103496640 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016197	Chromo-like_dom_sf
IPR023780	Chromo_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0090304	nucleic acid metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.356900.1	Cucsa.356900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016197	Chromo domain-like	unknown	SSF54160	Chromo domain-like	coord: 110..187 score: 5.7
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 146..189 score: 2.
None	No IPR available	PANTHER	PTHR24559	FAMILY NOT NAMED	coord: 1..190 score: 8.4
None	No IPR available	PANTHER	PTHR24559:SF186	SUBFAMILY NOT NAMED	coord: 1..190 score: 8.4

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.356900	Cucurbita pepo (Zucchini)	cgycpeB0928
Cucsa.356900	Cucurbita pepo (Zucchini)	cgycpeB0929
Cucsa.356900	Bottle gourd (USVL1VR-Ls)	cgylsiB573
Cucsa.356900	Melon (DHL92) v3.6.1	cgymedB575
Cucsa.356900	Silver-seed gourd	carcgyB1085
Cucsa.356900	Cucumber (Chinese Long) v3	cgycucB542
Cucsa.356900	Watermelon (97103) v2	cgywmbB608
Cucsa.356900	Wax gourd	cgywgoB709
Cucsa.356900	Cucurbita maxima (Rimu)	cgycmaB0969
Cucsa.356900	Cucurbita maxima (Rimu)	cgycmaB0970
Cucsa.356900	Cucurbita moschata (Rifu)	cgycmoB0972
Cucsa.356900	Cucurbita moschata (Rifu)	cgycmoB0973
Cucsa.356900	Wild cucumber (PI 183967)	cgycpiB528
Cucsa.356900	Cucumber (Chinese Long) v2	cgycuB500
Cucsa.356900	Melon (DHL92) v3.5.1	cgymeB574
Cucsa.356900	Watermelon (Charleston Gray)	cgywcgB605
Cucsa.356900	Watermelon (97103) v1	cgywmB638