Cucsa.356870 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.356870
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Tryptophan synthase, beta chain
Location	scaffold03577 : 1786802 .. 1790638 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAACACACACACACACACACACAAAAAaGAAGAGAGAAGAGGAGAAAGTAGAAATTCAATAACAAAAATAAGAACAAAATTCTCTCACTCTCTCTTATAATCTCTTTTTCTCTCTAAAAATGGTTGCCTCTACGGCGCTCAACTGCAAAATCCCCACCTTTTCTCCCTCCTCTTCCCATTCAAATAACAAGATTTCTTCTTCTACCTCTCACTTTCCTGTCCGTTTCCGCCGAGTTTCCTCCAACCCATCGCCGGTTTTTCGGTCAAACGCCGTCTCCTGCACTTTGACTCGGGAGCCGTCGCTGGCAATGGAGGACAAAGTTCATGATTCGAGTCTGCAACAGAGGCCGGATTCATTTGGCCGTTTTGGCCGTTTTGGGGGAAAGTACGTCCCCGAGACCCTAATGCACGCCCTTACCGAGCTCGAAACTGCTTTCTATTCCCTTGCTGGGGACCAAGACTTTCAGGTTTGTGGGAATTTTGTTTTCCTTTGAGGTTTTTTCTTCTTTATTTTTTTTAAAAAAAAAaTTaGATGGAGGAAGTTTAATTTCCTGAGTTTTGGGTCTTTGTTTTAATCGCCTAATTAGGTGCTGTTTGCGGATTTTGAATCTCTTGAATGCTTATTGGATTTTATGTGGACTTAAGTTGAATCTCTTGAATGCTTATTGGATTTTATGTGCATTTAAGTTGAAATGTTTTCTTTTTCTTTCTTGAAATTGGAAGTAGAAAAGTGGGAGTTTGACATTTATTAGCCACAGTTACATAATAAAACCATTAAGTATGTAGATGTTATTTTCAAAGAGAAGAAGGCTTTGAGACATTTTTTTAATTTTATTGCAAAGTTCATGATTTTGAAATTCAGTAGTTTCTCAATTGGACATACCAAGCAGTACTTATTATCTTTTTTTACCCACTCTTTATAATAATTGACTCTAATCATCAGAAAGAGCTGGATGGAATTTTGAGAGACTACGTGGGGAGAGAGAGCCCTTTGTACTTCGCAGAGAGGCTGACTGAGCACTATAGACGTTCCAATGGTGAGGGGCCTCATATTTTCCTGAAGAGAGAAGACCTTAACCACACAGGGGCTCACAAAATTAACAATGCTGTTGCCCAAGCTTTGCTTGCTAAGCGTTTGGGAAAGAAACGGATTATAGCTGAAACAGGCGCAGGTCAGCATGGAGTTGCAACTGCAACTGTTTGTGCTAGATTTGGACTAGAATGTATCATCTACATGGGTGCCCAAGATATGGAAAGGCAAGCTCTCAATGTGTTCAGAATGCAGCTTCTTGGGGCTGAGGTTTGTCCATTATAATTTTGGTTGTTTTCTTCCATTATTAATCTGCAGCCATTTATTTGTAGGACTCTAATTTCATCGTCCAATCTGTTATGATCAACTTGGACCTTCAAAACTGTGAATATTGTATTTCTGTTGGAGAATTTGGGTGCTCAACACACCAGGAGAATTTATCTTATTTGTTCTCCTGGCTGAATGTTCACTTTTTTGCATATTTCAAATCCCTCTGATAACGTTTGTATTTATTACCATTCTACTGCATAGTCAGACATTCTCTTTAGTTATTCTCCTTTTTCATTGCTAGTTAGCATTCCCTAAAGTTATGGATTGAGCTTTCTCTGACTTGCATCCTTGCTATGAATATGATTTAAAGTGCAGCTTATTCAGTCAACAAATATTTATTGCATGTAATATAATTTGTTTCCTATTCTTTCCATTATTGTTTGTAGAGATAGTTTTGAACCTGGTCACAGCGTTTATATTTCTTCCAAGTCTTTTCATGAACCAGCATTTGAAAATAAAAGATTTATCCTAATAGGTGTGATTCGCAGTTGCTACCTCATCCTAGGTGTTCAAAATGAATTTCAAAGTATAAATTACACTTGCTTTGCAGGTTAGGCCAGTTCATTCTGGTACTGCCACGCTAAAGGATGCTACTTCAGAAGCTATAAGGGACTGGGTGACTAATGTGGAGACTACCCATTATATCTTAGGATCTGTTGCTGGGCCCCACCCATATCCCATGATGGTGAGAGATTTTCATGCTGTGATTGGTAAAGAAACTAGAAAACAGGCCTTGGAGAAGTGGGGAGGGAAGCCAGATGTCCTAGTAGCATGTGTTGGAGGCGGTTCAAATGCTATGGGACTATTTCATGAGTTTGTCAATGACAAAGATGTTAGGTTGGTTGGTGTGGAGGCTGCAGGTTTTGGCTTGGATAGTGGTAAGCATGCAGCCACTCTAACCAAAGGGGAAGTTGGGGTTCTACACGGAGCGATGAGTTATTTACTACAGGATGATGATGGACAAATAATTGAACCTCACTCGATCAGTGCAGGGTATGGGATATATACAAAGTTTTTCTTTGTCATGATGTTTGCCTGCTGTTCCAATCTTGCACCTTTCAAATTTAATCCATGTTTTTTTTtCATGGTCTGCAGTTTGGATTACCCTGGGGTTGGACCAGAGCATAGTTATTTGAAAGATCTAGGCCGTGCTGAGTATCACAGTGTAACTGATGATGAAGCACTGGAAGGTACTGGATTGTAATACATTAATTTGTTGGCATTTTATTtGTTAGATATACCATCTATCTTTTGtAAAaGTTATCTTTTTAGtATATTTATTATATATATATATATATAACTTATATATATATCCTTCTTTTTCAGAGCCAAAGTTCTCTTTTtATTCTGAAAATTACAATCTGTTTTtACTATTTAGGTAGTGTTTTATACTTATTACTTCAGTCCATTTTTtCTGCTCTGTTCAATGTTTATCTTTCTTTCCTATCTTGATTCTCACCTTCCTTTTAGGTGGAAACTGCTATGCATTCTTTTCAGCTATTAGTAATTTTGTAAACTGTGCACTGGCACATGCTAAATCATGACCAATTATCGTGGTTCTTCTTTAGGTTCCTGATGAGAAATTATCTGTTCTCATTAAGTTTTAAATAAATTTGTACTAAATTAGTTTTACATAAAGTCCTATCTGTTACTACAATCTGAGCTCTGTTTCACCCACTGATTCCATGATCAATAATCTACTGCAGAATCTATCTTGATAGTGGAGTTGTTGGTCCCTGAGGGAGGTTTCTCTTCCATGTATCTGTCTTTTGATTGATTTTGATTGTTATCTTGAATCACTATGGACTGTTTTGGAAACTTGTACATCCAATTAGAACTTGATTTCTGTCCAAGATGATGGTTGTGAAAGCTAGCTTTCACCATTTCTTGTTCTTGTTGTTCTTCTGATCCTTAGAGGCTAAATTCATAATCTGGTTTGTGACTGCAGCCTTCAAGAGATTGTCACGACTGGAGGGCATAATCCCAGCTCTGGAGACATCTCATGCTCTGGCTTATCTTGAGAAGTTGTGTCCGACCCTCCCAGACGGAACAAAGGTCGTGCTTAACTGCAGCGGCAGAGGAGATAAGGATGTTCAGACAGCGATCAAGTATTTGCAAGTTTGATACATCACCATGGCTACCAGTACTAGTAAAACTAGAGGTCATTTTCTCTTGGTGAAAGCTTCGTCTAAATTGAATTGTTTTCCAATATGATGAGATCCGAGCTTGAAGACAATAAAGCATACATTACAAAGCAAAGTTTCCTTTCCTTGCCTTTCCTTTCTTTTAGAAACTATATGTTGTATTTATACAAGTAAAGTTTGCATTTTGATACAGATTCTGGCGAAATGAATAGTCTGAAGAGGCCTTGTGGGGATAGATTTTACTGTTTATGCATCTTTTTGAGGTTTTAATGAATGAGTCTGTATCAAGTGTTTGGACTTATTACATAAGAAGAAGTTAGACAAACAGTGT

mRNA sequence

cTAAacacacacacacacacacacaAAAAAGAAGAGAGAAGAGGAGAAAGTAGAAATTCAATAACAAAAATAAGAACAAAATTCTCTCACTCTCTCTTATAATCTCTTTTTCTCTCTAAAAATGGTTGCCTCTACGGCGCTCAACTGCAAAATCCCCACCTTTTCTCCCTCCTCTTCCCATTCAAATAACAAGATTTCTTCTTCTACCTCTCACTTTCCTGTCCGTTTCCGCCGAGTTTCCTCCAACCCATCGCCGGTTTTTCGGTCAAACGCCGTCTCCTGCACTTTGACTCGGGAGCCGTCGCTGGCAATGGAGGACAAAGTTCATGATTCGAGTCTGCAACAGAGGCCGGATTCATTTGGCCGTTTTGGCCGTTTTGGGGGAAAGTACGTCCCCGAGACCCTAATGCACGCCCTTACCGAGCTCGAAACTGCTTTCTATTCCCTTGCTGGGGACCAAGACTTTCAGAAAGAGCTGGATGGAATTTTGAGAGACTACGTGGGGAGAGAGAGCCCTTTGTACTTCGCAGAGAGGCTGACTGAGCACTATAGACGTTCCAATGGTGAGGGGCCTCATATTTTCCTGAAGAGAGAAGACCTTAACCACACAGGGGCTCACAAAATTAACAATGCTGTTGCCCAAGCTTTGCTTGCTAAGCGTTTGGGAAAGAAACGGATTATAGCTGAAACAGGCGCAGGTCAGCATGGAGTTGCAACTGCAACTGTTTGTGCTAGATTTGGACTAGAATGTATCATCTACATGGGTGCCCAAGATATGGAAAGGCAAGCTCTCAATGTGTTCAGAATGCAGCTTCTTGGGGCTGAGGTTAGGCCAGTTCATTCTGGTACTGCCACGCTAAAGGATGCTACTTCAGAAGCTATAAGGGACTGGGTGACTAATGTGGAGACTACCCATTATATCTTAGGATCTGTTGCTGGGCCCCACCCATATCCCATGATGGTGAGAGATTTTCATGCTGTGATTGGTAAAGAAACTAGAAAACAGGCCTTGGAGAAGTGGGGAGGGAAGCCAGATGTCCTAGTAGCATGTGTTGGAGGCGGTTCAAATGCTATGGGACTATTTCATGAGTTTGTCAATGACAAAGATGTTAGGTTGGTTGGTGTGGAGGCTGCAGGTTTTGGCTTGGATAGTGGTAAGCATGCAGCCACTCTAACCAAAGGGGAAGTTGGGGTTCTACACGGAGCGATGAGTTATTTACTACAGGATGATGATGGACAAATAATTGAACCTCACTCGATCAGTGCAGGTTTGGATTACCCTGGGGTTGGACCAGAGCATAGTTATTTGAAAGATCTAGGCCGTGCTGAGTATCACAGTGTAACTGATGATGAAGCACTGGAAGCCTTCAAGAGATTGTCACGACTGGAGGGCATAATCCCAGCTCTGGAGACATCTCATGCTCTGGCTTATCTTGAGAAGTTGTGTCCGACCCTCCCAGACGGAACAAAGGTCGTGCTTAACTGCAGCGGCAGAGGAGATAAGGATGTTCAGACAGCGATCAAGTATTTGCAAGTTTGATACATCACCATGGCTACCAGTACTAGTAAAACTAGAGGTCATTTTCTCTTGGTGAAAGCTTCGTCTAAATTGAATTGTTTTCCAATATGATGAGATCCGAGCTTGAAGACAATAAAGCATACATTACAAAGCAAAGtttcctttccttgcctttcctttcttttAGAAACTATATGTTGTATTTATACAAGTAAAGTTTGCATTTTGATACAGATTCTGGCGAAATGAATAGTCTGAAGAGGCCTTGTGGGGATAGATTTTACTGTTTATGCATCTTTTTGAGGTTTTAATGAATGAGTCTGTATCAAGTGTTTGGACTTATTACATAAGAAGAAGTTAGACAAACAGTGT

Coding sequence (CDS)

ATGGTTGCCTCTACGGCGCTCAACTGCAAAATCCCCACCTTTTCTCCCTCCTCTTCCCATTCAAATAACAAGATTTCTTCTTCTACCTCTCACTTTCCTGTCCGTTTCCGCCGAGTTTCCTCCAACCCATCGCCGGTTTTTCGGTCAAACGCCGTCTCCTGCACTTTGACTCGGGAGCCGTCGCTGGCAATGGAGGACAAAGTTCATGATTCGAGTCTGCAACAGAGGCCGGATTCATTTGGCCGTTTTGGCCGTTTTGGGGGAAAGTACGTCCCCGAGACCCTAATGCACGCCCTTACCGAGCTCGAAACTGCTTTCTATTCCCTTGCTGGGGACCAAGACTTTCAGAAAGAGCTGGATGGAATTTTGAGAGACTACGTGGGGAGAGAGAGCCCTTTGTACTTCGCAGAGAGGCTGACTGAGCACTATAGACGTTCCAATGGTGAGGGGCCTCATATTTTCCTGAAGAGAGAAGACCTTAACCACACAGGGGCTCACAAAATTAACAATGCTGTTGCCCAAGCTTTGCTTGCTAAGCGTTTGGGAAAGAAACGGATTATAGCTGAAACAGGCGCAGGTCAGCATGGAGTTGCAACTGCAACTGTTTGTGCTAGATTTGGACTAGAATGTATCATCTACATGGGTGCCCAAGATATGGAAAGGCAAGCTCTCAATGTGTTCAGAATGCAGCTTCTTGGGGCTGAGGTTAGGCCAGTTCATTCTGGTACTGCCACGCTAAAGGATGCTACTTCAGAAGCTATAAGGGACTGGGTGACTAATGTGGAGACTACCCATTATATCTTAGGATCTGTTGCTGGGCCCCACCCATATCCCATGATGGTGAGAGATTTTCATGCTGTGATTGGTAAAGAAACTAGAAAACAGGCCTTGGAGAAGTGGGGAGGGAAGCCAGATGTCCTAGTAGCATGTGTTGGAGGCGGTTCAAATGCTATGGGACTATTTCATGAGTTTGTCAATGACAAAGATGTTAGGTTGGTTGGTGTGGAGGCTGCAGGTTTTGGCTTGGATAGTGGTAAGCATGCAGCCACTCTAACCAAAGGGGAAGTTGGGGTTCTACACGGAGCGATGAGTTATTTACTACAGGATGATGATGGACAAATAATTGAACCTCACTCGATCAGTGCAGGTTTGGATTACCCTGGGGTTGGACCAGAGCATAGTTATTTGAAAGATCTAGGCCGTGCTGAGTATCACAGTGTAACTGATGATGAAGCACTGGAAGCCTTCAAGAGATTGTCACGACTGGAGGGCATAATCCCAGCTCTGGAGACATCTCATGCTCTGGCTTATCTTGAGAAGTTGTGTCCGACCCTCCCAGACGGAACAAAGGTCGTGCTTAACTGCAGCGGCAGAGGAGATAAGGATGTTCAGACAGCGATCAAGTATTTGCAAGTTTGA

Protein sequence

MVASTALNCKIPTFSPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNAVSCTLTREPSLAMEDKVHDSSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELDGILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLSRLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV*

Homology

[Close]

BLAST of Cucsa.356870 vs. Swiss-Prot
Match: TRBP2_ARATH (Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana GN=TSB2 PE=1 SV=2)

HSP 1 Score: 770.4 bits (1988), Expect = 1.1e-221
Identity = 386/469 (82.30%), Postives = 425/469 (90.62%), Query Frame = 1


Query: 13  TFSPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNA---VSCTLTREPSLAMEDKVH 72
           TF PSS  ++++++   S  P +  + +  PS   RS++   VSCT+ ++P++ M D   
Sbjct: 9   TFRPSSVSASSELTHLRS--PSKLPKFTPLPSARSRSSSSFSVSCTIAKDPAVVMADSEK 68

Query: 73  ------DSSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELDGIL 132
                 D ++ QRPDSFGRFG+FGGKYVPETLMHAL+ELETAFYSLA D+DFQ+EL  IL
Sbjct: 69  IKAAGSDPTMWQRPDSFGRFGKFGGKYVPETLMHALSELETAFYSLATDEDFQRELAEIL 128

Query: 133 RDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGK 192
           +DYVGRESPLYFAERLTEHYRR NGEGP I+LKREDLNHTGAHKINNAVAQALLAKRLGK
Sbjct: 129 KDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGK 188

Query: 193 KRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVHSGT 252
           KRIIAETGAGQHGVATATVCARFGL+CIIYMGAQDMERQALNVFRM+LLGAEVR VHSGT
Sbjct: 189 KRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGT 248

Query: 253 ATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGK 312
           ATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQA+EKWGGK
Sbjct: 249 ATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQAMEKWGGK 308

Query: 313 PDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHGAM 372
           PDVLVACVGGGSNAMGLFHEFV+D +VR++GVEAAGFGLDSGKHAATLTKG+VGVLHGAM
Sbjct: 309 PDVLVACVGGGSNAMGLFHEFVDDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAM 368

Query: 373 SYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLSRLE 432
           SYLLQDDDGQIIEPHSISAGLDYPGVGPEHS+LKD+GRAEY SVTD+EALEAFKR+SRLE
Sbjct: 369 SYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDVGRAEYFSVTDEEALEAFKRVSRLE 428

Query: 433 GIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV 473
           GIIPALETSHALA+LEKLCPTLPDG +VVLN SGRGDKDVQTAIKYL+V
Sbjct: 429 GIIPALETSHALAHLEKLCPTLPDGARVVLNFSGRGDKDVQTAIKYLEV 475

[Close]

BLAST of Cucsa.356870 vs. Swiss-Prot
Match: TRPB1_ARATH (Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana GN=TSB1 PE=2 SV=1)

HSP 1 Score: 770.0 bits (1987), Expect = 1.5e-221
Identity = 387/464 (83.41%), Postives = 416/464 (89.66%), Query Frame = 1


Query: 13  TFSPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNA----VSCTLTREPSLAMEDKV 72
           TF  S S + +  SS  +H    F+ V   P P  RS +    VSCT+ ++P + M    
Sbjct: 9   TFRASVSSAPSS-SSQLTHLKSPFKAVKYTPLPSSRSKSSSFSVSCTIAKDPPVLMAAG- 68

Query: 73  HDSSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELDGILRDYVG 132
            D +L QRPDSFGRFG+FGGKYVPETLMHAL+ELE+AFY+LA D DFQ+EL GIL+DYVG
Sbjct: 69  SDPALWQRPDSFGRFGKFGGKYVPETLMHALSELESAFYALATDDDFQRELAGILKDYVG 128

Query: 133 RESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIA 192
           RESPLYFAERLTEHYRR NGEGP I+LKREDLNHTGAHKINNAVAQALLAKRLGKKRIIA
Sbjct: 129 RESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIA 188

Query: 193 ETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVHSGTATLKD 252
           ETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRM+LLGAEVR VHSGTATLKD
Sbjct: 189 ETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKD 248

Query: 253 ATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLV 312
           ATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLV
Sbjct: 249 ATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLV 308

Query: 313 ACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQ 372
           ACVGGGSNAMGLFHEFVND +VR++GVEAAGFGLDSGKHAATLTKG+VGVLHGAMSYLLQ
Sbjct: 309 ACVGGGSNAMGLFHEFVNDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQ 368

Query: 373 DDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLSRLEGIIPA 432
           DDDGQIIEPHSISAGLDYPGVGPEHS+ KD+GRAEY+S+TD+EALEAFKR+SRLEGIIPA
Sbjct: 369 DDDGQIIEPHSISAGLDYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPA 428

Query: 433 LETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV 473
           LETSHALAYLEKLCPTL DGT+VVLN SGRGDKDVQT  KYL V
Sbjct: 429 LETSHALAYLEKLCPTLSDGTRVVLNFSGRGDKDVQTVAKYLDV 470

[Close]

BLAST of Cucsa.356870 vs. Swiss-Prot
Match: TRPB_CAMAC (Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata GN=TSB PE=2 SV=1)

HSP 1 Score: 761.5 bits (1965), Expect = 5.3e-219
Identity = 382/466 (81.97%), Postives = 416/466 (89.27%), Query Frame = 1


Query: 20  HSNNKISSSTSHFPVRFRRVSSNPS-------------PVFRSNAVSCTLTREPSLAMED 79
           ++N    ++TS FP  +R  S NPS                +  ++ CT+ RE  +  E 
Sbjct: 4   YTNPACRTNTSAFPGPYRPYS-NPSRFSFNLDKFRPRTSAIKVPSICCTIARE--MEKER 63

Query: 80  KVHDSSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELDGILRDY 139
              +  + QRPDSFGRFG+FGGKYVPETLM+ALTELE+AF SL+GDQ FQKELDGIL+DY
Sbjct: 64  SEREPDVLQRPDSFGRFGKFGGKYVPETLMYALTELESAFRSLSGDQVFQKELDGILKDY 123

Query: 140 VGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKKRI 199
           VGRESPLYFAERLT HY+R NGEGP I+LKREDLNHTGAHKINNAVAQALLAKRLGKKRI
Sbjct: 124 VGRESPLYFAERLTLHYKRPNGEGPEIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRI 183

Query: 200 IAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVHSGTATL 259
           IAETGAGQHGVATATVCARFGL+C+IYMGAQDMERQALNVFRM+LLGAEVR VHSGTATL
Sbjct: 184 IAETGAGQHGVATATVCARFGLQCVIYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATL 243

Query: 260 KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDV 319
           KDATSEAIRDWVTNVE+THYILGSVAGPHPYPMMVR+FHAVIGKETRKQALEKWGGKPDV
Sbjct: 244 KDATSEAIRDWVTNVESTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWGGKPDV 303

Query: 320 LVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYL 379
           LVACVGGGSNAMGLFHEFV+DKDVR++GVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYL
Sbjct: 304 LVACVGGGSNAMGLFHEFVDDKDVRMIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYL 363

Query: 380 LQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLSRLEGII 439
           LQDDDGQIIEPHSISAGLDYPGVGPEHS+LKD+GRAEY+  TD+EALEAFKRLSRLEGII
Sbjct: 364 LQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDIGRAEYYCCTDEEALEAFKRLSRLEGII 423

Query: 440 PALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV 473
           PALETSHALA+LEKLCPTLP+GTKVVLNCSGRGDKDV TAIK+LQV
Sbjct: 424 PALETSHALAFLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKHLQV 466

[Close]

BLAST of Cucsa.356870 vs. Swiss-Prot
Match: TRPB2_MAIZE (Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays GN=TSB2 PE=2 SV=1)

HSP 1 Score: 723.4 bits (1866), Expect = 1.6e-207
Identity = 350/398 (87.94%), Postives = 380/398 (95.48%), Query Frame = 1


Query: 75  QRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELDGILRDYVGRESPLY 134
           QRPD+ GRFGRFGGKYVPETLMHALTELE+AF++LA D +FQKELDGIL+DYVGRESPLY
Sbjct: 46  QRPDAMGRFGRFGGKYVPETLMHALTELESAFHALATDDEFQKELDGILKDYVGRESPLY 105

Query: 135 FAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQ 194
           FAERLTEHY+R++G GP I+LKREDLNHTGAHKINNAVAQALLAKRLGK+RIIAETGAGQ
Sbjct: 106 FAERLTEHYKRADGTGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKQRIIAETGAGQ 165

Query: 195 HGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVHSGTATLKDATSEAI 254
           HGVATATVC RFGL+CIIYMGAQDMERQALNVFRM+LLGAEVR VHSGTATLKDATSEAI
Sbjct: 166 HGVATATVCRRFGLQCIIYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAI 225

Query: 255 RDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGG 314
           RDWVTNVETTHYILGSVAGPHPYPMMVR+FH VIGKETR+QA++KWGGKPDVLVACVGGG
Sbjct: 226 RDWVTNVETTHYILGSVAGPHPYPMMVREFHKVIGKETRRQAMDKWGGKPDVLVACVGGG 285

Query: 315 SNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDDDGQI 374
           SNAMGLFHEFV D+DVRLVG+EAAG G+D+ KHAATLTKG+VGVLHG+MSYLLQDDDGQ+
Sbjct: 286 SNAMGLFHEFVEDQDVRLVGLEAAGHGVDTDKHAATLTKGQVGVLHGSMSYLLQDDDGQV 345

Query: 375 IEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLSRLEGIIPALETSHA 434
           IEPHSISAGLDYPGVGPEHS+LKD+GRAEY SVTD EAL+AFKR+SRLEGIIPALETSHA
Sbjct: 346 IEPHSISAGLDYPGVGPEHSFLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSHA 405

Query: 435 LAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV 473
           LAYLEKLCPTL DG +VV+NCSGRGDKDV TA KYL V
Sbjct: 406 LAYLEKLCPTLADGVRVVVNCSGRGDKDVHTASKYLDV 443

[Close]

BLAST of Cucsa.356870 vs. Swiss-Prot
Match: TRPB1_MAIZE (Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays GN=TSB1 PE=2 SV=1)

HSP 1 Score: 711.1 bits (1834), Expect = 8.3e-204
Identity = 345/389 (88.69%), Postives = 371/389 (95.37%), Query Frame = 1


Query: 84  GRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELDGILRDYVGRESPLYFAERLTEHY 143
           GRFGGKYVPETLMHALTELE AF++LA D +FQKELDGIL+DYVGRESPLYFAERLTEHY
Sbjct: 1   GRFGGKYVPETLMHALTELENAFHALATDDEFQKELDGILKDYVGRESPLYFAERLTEHY 60

Query: 144 RRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVC 203
           +R++G GP I+LKREDLNH GAHKINNAVAQALLAKRLGK+RIIAETGAGQHGVATATVC
Sbjct: 61  KRADGTGPLIYLKREDLNHRGAHKINNAVAQALLAKRLGKQRIIAETGAGQHGVATATVC 120

Query: 204 ARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVHSGTATLKDATSEAIRDWVTNVET 263
           ARFGL+CIIYMGAQDMERQALNVFRM+LLGAEVR VHSGTATLKDATSEAIRDWVTNVET
Sbjct: 121 ARFGLQCIIYMGAQDMERQALNVFRMKLLGAEVRAVHSGTATLKDATSEAIRDWVTNVET 180

Query: 264 THYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHE 323
           THYILGSVAGPHPYPMMVR+FH VIGKETR+QA+ KWGGKPDVLVACVGGGSNAMGLFHE
Sbjct: 181 THYILGSVAGPHPYPMMVREFHKVIGKETRRQAMHKWGGKPDVLVACVGGGSNAMGLFHE 240

Query: 324 FVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAG 383
           FV D+DVRL+GVEAAG G+D+ KHAATLTKG+VGVLHG+MSYLLQDDDGQ+IEPHSISAG
Sbjct: 241 FVEDQDVRLIGVEAAGHGVDTDKHAATLTKGQVGVLHGSMSYLLQDDDGQVIEPHSISAG 300

Query: 384 LDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLSRLEGIIPALETSHALAYLEKLCP 443
           LDYPGVGPEHS+LKD+GRAEY SVTD EAL+AFKR+SRLEGIIPALETSHALAYLEKLCP
Sbjct: 301 LDYPGVGPEHSFLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSHALAYLEKLCP 360

Query: 444 TLPDGTKVVLNCSGRGDKDVQTAIKYLQV 473
           TLPDG +VVLNCSGRGDKDV TA KYL V
Sbjct: 361 TLPDGVRVVLNCSGRGDKDVHTASKYLDV 389

[Close]

BLAST of Cucsa.356870 vs. TrEMBL
Match: A0A0A0M065_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G660140 PE=3 SV=1)

HSP 1 Score: 949.9 bits (2454), Expect = 1.2e-273
Identity = 471/472 (99.79%), Postives = 472/472 (100.00%), Query Frame = 1


Query: 1   MVASTALNCKIPTFSPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNAVSCTLTREP 60
           MVASTALNCKIPTFSPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNAVSCTLTREP
Sbjct: 1   MVASTALNCKIPTFSPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNAVSCTLTREP 60

Query: 61  SLAMEDKVHDSSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELD 120
           SLAMEDKVHDSSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELD
Sbjct: 61  SLAMEDKVHDSSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELD 120

Query: 121 GILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR 180
           GILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR
Sbjct: 121 GILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR 180

Query: 181 LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVH 240
           LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVH
Sbjct: 181 LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVH 240

Query: 241 SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKW 300
           SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKW
Sbjct: 241 SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKW 300

Query: 301 GGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLH 360
           GGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLH
Sbjct: 301 GGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLH 360

Query: 361 GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLS 420
           GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRL+
Sbjct: 361 GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLA 420

Query: 421 RLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV 473
           RLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV
Sbjct: 421 RLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV 472

[Close]

BLAST of Cucsa.356870 vs. TrEMBL
Match: W9RBZ6_9ROSA (Tryptophan synthase beta chain 2 OS=Morus notabilis GN=L484_017799 PE=3 SV=1)

HSP 1 Score: 780.4 bits (2014), Expect = 1.2e-222
Identity = 397/475 (83.58%), Postives = 427/475 (89.89%), Query Frame = 1


Query: 1   MVASTALN---CKIPTFSPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNAVSCTLT 60
           M AST  +   CK    SPS     N  SS  SH P++FR+ +S  +    +  V CTL 
Sbjct: 1   MAASTCCSSTPCK--HHSPSLPKPYNS-SSFPSHLPLKFRKFTSRATA---AATVFCTLA 60

Query: 61  REPSLAMEDKVHDSSLQ-QRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQ 120
            + + A+  +    SL   RPDSFGRFG++GGKYVPETLM+AL+ELETAF SLAGD DF+
Sbjct: 61  HDAAAAVVMQEAPPSLDLPRPDSFGRFGKYGGKYVPETLMYALSELETAFRSLAGDPDFE 120

Query: 121 KELDGILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQAL 180
           +ELDGIL+DYVGRESPLYFAERLTEHY+R +GEGPHI+LKREDLNHTGAHKINNAVAQAL
Sbjct: 121 RELDGILKDYVGRESPLYFAERLTEHYKRPDGEGPHIYLKREDLNHTGAHKINNAVAQAL 180

Query: 181 LAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEV 240
           LAKRLGK+RIIAETGAGQHGVATATVCARFGL+CIIYMGAQDMERQALNVFRMQLLGAEV
Sbjct: 181 LAKRLGKQRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMQLLGAEV 240

Query: 241 RPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQA 300
           RPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVR+FH VIGKETRKQA
Sbjct: 241 RPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHKVIGKETRKQA 300

Query: 301 LEKWGGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEV 360
           LEKWGGKPDVLVACVGGGSNAMGLFHEFV+DKDVRL+GVEAAG+GLDSGKHAATLTKGEV
Sbjct: 301 LEKWGGKPDVLVACVGGGSNAMGLFHEFVDDKDVRLIGVEAAGYGLDSGKHAATLTKGEV 360

Query: 361 GVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAF 420
           GVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHS+LKD GRAEY+SVTDDEALEAF
Sbjct: 361 GVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDTGRAEYYSVTDDEALEAF 420

Query: 421 KRLSRLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQ 472
           KRLSRLEGIIPALETSHALAYLEKLCPTLP+GTKVVLNCSGRGDKDVQTAIKYLQ
Sbjct: 421 KRLSRLEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVQTAIKYLQ 469

[Close]

BLAST of Cucsa.356870 vs. TrEMBL
Match: M0ZKI7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001048 PE=3 SV=1)

HSP 1 Score: 777.3 bits (2006), Expect = 1.0e-221
Identity = 387/447 (86.58%), Postives = 415/447 (92.84%), Query Frame = 1


Query: 26  SSSTSHFPVRFRRVSSNPSPVFRSNAVSCTLTREPSLAMEDKVHDSSLQQRPDSFGRFGR 85
           SSS S  P +F +++S+P+      A++C LT         K  D++  QRPDSFGRFG+
Sbjct: 21  SSSQSQIPFKFIKITSSPT---NPPAIACVLT--------GKSMDAAAIQRPDSFGRFGK 80

Query: 86  FGGKYVPETLMHALTELETAFYSLAGDQDFQKELDGILRDYVGRESPLYFAERLTEHYRR 145
           FGGKYVPETLMHAL ELETAF SLA DQDFQKELDGILRDYVGRESPLYFAERLTEHY+R
Sbjct: 81  FGGKYVPETLMHALDELETAFNSLATDQDFQKELDGILRDYVGRESPLYFAERLTEHYKR 140

Query: 146 SNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCAR 205
            +GEG  I+LKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCAR
Sbjct: 141 PDGEGSMIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCAR 200

Query: 206 FGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETTH 265
           FGL+C+IYMGAQDMERQALNVFRM+LLGAEVR VHSGTATLKDATSEAIRDWVTNVETTH
Sbjct: 201 FGLDCVIYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVETTH 260

Query: 266 YILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFV 325
           YILGSVAGPHPYPMMVRDFHAVIGKETRKQ+LEKWGGKPDVLVACVGGGSNAMGLFHEFV
Sbjct: 261 YILGSVAGPHPYPMMVRDFHAVIGKETRKQSLEKWGGKPDVLVACVGGGSNAMGLFHEFV 320

Query: 326 NDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAGLD 385
           +DKDVRL+GVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQD+DGQI+EPHSISAGLD
Sbjct: 321 DDKDVRLIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDEDGQIVEPHSISAGLD 380

Query: 386 YPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLSRLEGIIPALETSHALAYLEKLCPTL 445
           YPGVGPEHS+LKDLGRAEY+S+TD+EALEAFKRLSRLEGIIPALETSHALAYLEKLCPTL
Sbjct: 381 YPGVGPEHSFLKDLGRAEYYSITDEEALEAFKRLSRLEGIIPALETSHALAYLEKLCPTL 440

Query: 446 PDGTKVVLNCSGRGDKDVQTAIKYLQV 473
           P+GTKVVLNCSGRGDKDVQTAIKYL+V
Sbjct: 441 PNGTKVVLNCSGRGDKDVQTAIKYLKV 456

[Close]

BLAST of Cucsa.356870 vs. TrEMBL
Match: R0EWR9_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10026347mg PE=3 SV=1)

HSP 1 Score: 776.2 bits (2003), Expect = 2.3e-221
Identity = 388/461 (84.16%), Postives = 419/461 (90.89%), Query Frame = 1


Query: 15  SPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNA---VSCTLTREPSLAMEDKVHDS 74
           S SSS S++  SS  +H    F+ V   P P  RS +   VSCT+ ++P++ M     D 
Sbjct: 10  SVSSSPSSSSSSSQLTHLRSPFKAVKFTPLPSPRSKSSFSVSCTIAKDPAVLMAAG-SDP 69

Query: 75  SLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELDGILRDYVGRES 134
           +L QRPDSFGRFG+FGGKYVPETLMHAL+ELE+AFY+LA D DFQ+EL GIL+DYVGRES
Sbjct: 70  ALWQRPDSFGRFGKFGGKYVPETLMHALSELESAFYALATDDDFQRELAGILKDYVGRES 129

Query: 135 PLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETG 194
           PLYFAERLTEHYRR NGEGP I+LKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETG
Sbjct: 130 PLYFAERLTEHYRRGNGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETG 189

Query: 195 AGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVHSGTATLKDATS 254
           AGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRM+LLGAEVR VHSGTATLKDATS
Sbjct: 190 AGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATS 249

Query: 255 EAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACV 314
           EAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACV
Sbjct: 250 EAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACV 309

Query: 315 GGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDDD 374
           GGGSNAMGLFHEFVND +VR++GVEAAGFGLDSGKHAATLTKG+VGVLHGAMSYLLQDDD
Sbjct: 310 GGGSNAMGLFHEFVNDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDD 369

Query: 375 GQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLSRLEGIIPALET 434
           GQIIEPHSISAGLDYPGVGPEHS+ KD+GRAEY+S+TD+EALEAFKR+SRLEGIIPALET
Sbjct: 370 GQIIEPHSISAGLDYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPALET 429

Query: 435 SHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV 473
           SHALAYLEKLCPTL DGT+VVLN SGRGDKDVQT  KYL+V
Sbjct: 430 SHALAYLEKLCPTLADGTRVVLNFSGRGDKDVQTVAKYLEV 469

[Close]

BLAST of Cucsa.356870 vs. TrEMBL
Match: V4MNP2_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10025097mg PE=3 SV=1)

HSP 1 Score: 774.2 bits (1998), Expect = 8.9e-221
Identity = 392/471 (83.23%), Postives = 424/471 (90.02%), Query Frame = 1


Query: 13  TFSPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNA-----VSCTLTREPSLAMED- 72
           TF PS S      SS ++H    F+     P P  RS +     VSCT+ ++P++ M + 
Sbjct: 9   TFRPSIS-----ASSESTHLRSPFKLPQFTPLPSSRSRSSSSFSVSCTIAKDPAVRMAEA 68

Query: 73  ---KV--HDSSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELDG 132
              KV   DS+L QRPDSFGRFG+FGGKYVPETLMHAL+ELETAFYSLA D DFQKEL  
Sbjct: 69  EKTKVAGSDSTLWQRPDSFGRFGKFGGKYVPETLMHALSELETAFYSLATDDDFQKELAE 128

Query: 133 ILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRL 192
           IL+DYVGRESPLYFAERLTEHYRR NGEGP I+LKREDLNHTGAHKINNAVAQALLAKRL
Sbjct: 129 ILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRL 188

Query: 193 GKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVHS 252
           GKKRIIAETGAGQHGVATATVCARFGL+CIIYMGAQDMERQALNVFRM+LLGAEVR VHS
Sbjct: 189 GKKRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMRLLGAEVRGVHS 248

Query: 253 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWG 312
           GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETR+QA+EKWG
Sbjct: 249 GTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRRQAMEKWG 308

Query: 313 GKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHG 372
           GKPDVLVACVGGGSNAMGLFHEFV+D +VR++GVEAAGFGLDSGKHAATLTKG+VGVLHG
Sbjct: 309 GKPDVLVACVGGGSNAMGLFHEFVDDSEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHG 368

Query: 373 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLSR 432
           AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHS+LKD+GRAEY+SVTD+EALEAFKR+SR
Sbjct: 369 AMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDVGRAEYYSVTDEEALEAFKRVSR 428

Query: 433 LEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV 473
           LEGIIPALETSHALA+LEKLCPTLPDGT+VVLN SGRGDKDVQTAIKYL+V
Sbjct: 429 LEGIIPALETSHALAHLEKLCPTLPDGTRVVLNFSGRGDKDVQTAIKYLEV 474

[Close]

BLAST of Cucsa.356870 vs. TAIR10
Match: AT4G27070.1 (AT4G27070.1 tryptophan synthase beta-subunit 2)

HSP 1 Score: 770.4 bits (1988), Expect = 6.5e-223
Identity = 386/469 (82.30%), Postives = 425/469 (90.62%), Query Frame = 1


Query: 13  TFSPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNA---VSCTLTREPSLAMEDKVH 72
           TF PSS  ++++++   S  P +  + +  PS   RS++   VSCT+ ++P++ M D   
Sbjct: 9   TFRPSSVSASSELTHLRS--PSKLPKFTPLPSARSRSSSSFSVSCTIAKDPAVVMADSEK 68

Query: 73  ------DSSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELDGIL 132
                 D ++ QRPDSFGRFG+FGGKYVPETLMHAL+ELETAFYSLA D+DFQ+EL  IL
Sbjct: 69  IKAAGSDPTMWQRPDSFGRFGKFGGKYVPETLMHALSELETAFYSLATDEDFQRELAEIL 128

Query: 133 RDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGK 192
           +DYVGRESPLYFAERLTEHYRR NGEGP I+LKREDLNHTGAHKINNAVAQALLAKRLGK
Sbjct: 129 KDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGK 188

Query: 193 KRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVHSGT 252
           KRIIAETGAGQHGVATATVCARFGL+CIIYMGAQDMERQALNVFRM+LLGAEVR VHSGT
Sbjct: 189 KRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGT 248

Query: 253 ATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGK 312
           ATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQA+EKWGGK
Sbjct: 249 ATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQAMEKWGGK 308

Query: 313 PDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHGAM 372
           PDVLVACVGGGSNAMGLFHEFV+D +VR++GVEAAGFGLDSGKHAATLTKG+VGVLHGAM
Sbjct: 309 PDVLVACVGGGSNAMGLFHEFVDDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAM 368

Query: 373 SYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLSRLE 432
           SYLLQDDDGQIIEPHSISAGLDYPGVGPEHS+LKD+GRAEY SVTD+EALEAFKR+SRLE
Sbjct: 369 SYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDVGRAEYFSVTDEEALEAFKRVSRLE 428

Query: 433 GIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV 473
           GIIPALETSHALA+LEKLCPTLPDG +VVLN SGRGDKDVQTAIKYL+V
Sbjct: 429 GIIPALETSHALAHLEKLCPTLPDGARVVLNFSGRGDKDVQTAIKYLEV 475

[Close]

BLAST of Cucsa.356870 vs. TAIR10
Match: AT5G54810.1 (AT5G54810.1 tryptophan synthase beta-subunit 1)

HSP 1 Score: 770.0 bits (1987), Expect = 8.5e-223
Identity = 387/464 (83.41%), Postives = 416/464 (89.66%), Query Frame = 1


Query: 13  TFSPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNA----VSCTLTREPSLAMEDKV 72
           TF  S S + +  SS  +H    F+ V   P P  RS +    VSCT+ ++P + M    
Sbjct: 9   TFRASVSSAPSS-SSQLTHLKSPFKAVKYTPLPSSRSKSSSFSVSCTIAKDPPVLMAAG- 68

Query: 73  HDSSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELDGILRDYVG 132
            D +L QRPDSFGRFG+FGGKYVPETLMHAL+ELE+AFY+LA D DFQ+EL GIL+DYVG
Sbjct: 69  SDPALWQRPDSFGRFGKFGGKYVPETLMHALSELESAFYALATDDDFQRELAGILKDYVG 128

Query: 133 RESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIA 192
           RESPLYFAERLTEHYRR NGEGP I+LKREDLNHTGAHKINNAVAQALLAKRLGKKRIIA
Sbjct: 129 RESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIA 188

Query: 193 ETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVHSGTATLKD 252
           ETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRM+LLGAEVR VHSGTATLKD
Sbjct: 189 ETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKD 248

Query: 253 ATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLV 312
           ATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLV
Sbjct: 249 ATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLV 308

Query: 313 ACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQ 372
           ACVGGGSNAMGLFHEFVND +VR++GVEAAGFGLDSGKHAATLTKG+VGVLHGAMSYLLQ
Sbjct: 309 ACVGGGSNAMGLFHEFVNDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQ 368

Query: 373 DDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLSRLEGIIPA 432
           DDDGQIIEPHSISAGLDYPGVGPEHS+ KD+GRAEY+S+TD+EALEAFKR+SRLEGIIPA
Sbjct: 369 DDDGQIIEPHSISAGLDYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPA 428

Query: 433 LETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV 473
           LETSHALAYLEKLCPTL DGT+VVLN SGRGDKDVQT  KYL V
Sbjct: 429 LETSHALAYLEKLCPTLSDGTRVVLNFSGRGDKDVQTVAKYLDV 470

[Close]

BLAST of Cucsa.356870 vs. TAIR10
Match: AT5G28237.1 (AT5G28237.1 Pyridoxal-5'-phosphate-dependent enzyme family protein)

HSP 1 Score: 540.4 bits (1391), Expect = 1.1e-153
Identity = 266/412 (64.56%), Postives = 327/412 (79.37%), Query Frame = 1


Query: 60  PSLAMEDKVHDSSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKEL 119
           PSL       D     R D  G+FGRFGGK+VPETLM  L ELE  F  +  D +FQ+EL
Sbjct: 49  PSLDSVPTRTDKRQFLRGDGNGKFGRFGGKFVPETLMSRLIELEDEFNFVRCDHEFQEEL 108

Query: 120 DGILRDYVGRESPLYFAERLTEHYRR---SNGEGPHIFLKREDLNHTGAHKINNAVAQAL 179
              LRDYVGRE+PLYFAERLTEHY+    +   GP I+LKREDL+H G+HKINNA+AQA+
Sbjct: 109 TTALRDYVGRETPLYFAERLTEHYKNIVPTIEGGPEIYLKREDLSHCGSHKINNALAQAM 168

Query: 180 LAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEV 239
           +++RLG  R++A TGAGQHGVATA  CA+  LEC ++MGA D+E+Q+ NV  M+LLGA+V
Sbjct: 169 ISRRLGCSRVVAATGAGQHGVATAAACAKLSLECTVFMGAADIEKQSFNVLSMKLLGAQV 228

Query: 240 RPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQA 299
             V     T KDA+SEAIR+WV N+ TT+Y+ G+V GPHP P++VR+F +VIGKETR+QA
Sbjct: 229 ISVEG---TFKDASSEAIRNWVENLYTTYYLSGTVVGPHPCPIIVREFQSVIGKETRRQA 288

Query: 300 LEKWGGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEV 359
            + WGGKPDVLVACVG GSNA+GLFHEFV D+DVRLVGVEAAG GLDSGKH+ATL  G+V
Sbjct: 289 KQLWGGKPDVLVACVGSGSNALGLFHEFVGDEDVRLVGVEAAGLGLDSGKHSATLAFGDV 348

Query: 360 GVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAF 419
           GV HG+MSYLLQDD GQI++PHS+  GL+YPGVGPE S++K+ GRAE+++ TD+EA++A 
Sbjct: 349 GVYHGSMSYLLQDDQGQILKPHSVGVGLEYPGVGPEISFMKETGRAEFYTATDEEAIQAC 408

Query: 420 KRLSRLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIK 469
            RLSRLEGIIPALE SHALA+L+KL PTL DG KVV+NCSGRGDKD+ T I+
Sbjct: 409 MRLSRLEGIIPALEASHALAFLDKLVPTLRDGAKVVVNCSGRGDKDLDTLIQ 457

[Close]

BLAST of Cucsa.356870 vs. TAIR10
Match: AT5G38530.1 (AT5G38530.1 tryptophan synthase beta type 2)

HSP 1 Score: 122.5 bits (306), Expect = 7.1e-28
Identity = 111/366 (30.33%), Postives = 161/366 (43.99%), Query Frame = 1


Query: 129 RESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIA 188
           R +PL  A+RL +  +        I+ K E  +  G+HK N AV QA    + G K ++ 
Sbjct: 132 RPTPLIRAKRLEKLLQTP----ARIYFKYEGGSPAGSHKPNTAVPQAYYNAKEGVKNVVT 191

Query: 189 ETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPV--------- 248
           ETGAGQ G + A   + FGL+C ++  A     +      MQ  GA+V P          
Sbjct: 192 ETGAGQWGSSLAFASSLFGLDCEVWQVANSYHTKPYRRLMMQTWGAKVHPSPSDLTEAGR 251

Query: 249 ------HSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETR 308
                  S   +L  A SEA+     N E T Y LGSV         V     +IG+E  
Sbjct: 252 RILESDPSSPGSLGIAISEAVEVAARN-EDTKYCLGSVLN------HVLLHQTIIGEECI 311

Query: 309 KQALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTK 368
           +Q +E +G  PD+++ C GGGSN  GL   F+ +K   L G               +LTK
Sbjct: 312 QQ-MENFGETPDLIIGCTGGGSNFAGLSFPFIREK---LKGKINPVIRAVEPSACPSLTK 371

Query: 369 G----EVGVLHGAMSYLLQDDDGQIIEPHSISA-GLDYPGVGPEHSYLKDLGRAEYHSVT 428
           G    + G   G    +     G    P  I A GL Y G+ P  S++ + G  E  S+ 
Sbjct: 372 GVYAYDFGDTAGLTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLISHVYEQGFMEAISIP 431

Query: 429 DDEALEAFKRLSRLEGIIPALETSHALAYLEK---LCPTLPDGTKVVLNCSGRGDKDVQT 472
             E  +   + +R EGIIPA E +HA+A   +    C    +   +++   G G  D+ +
Sbjct: 432 QIECFQGAIQFARTEGIIPAPEPTHAIAATIREALRCKETGEAKVILMAMCGHGHFDLTS 482

[Close]

BLAST of Cucsa.356870 vs. NCBI nr
Match: gi|449449611|ref|XP_004142558.1| (PREDICTED: tryptophan synthase beta chain 1 [Cucumis sativus])

HSP 1 Score: 949.9 bits (2454), Expect = 1.7e-273
Identity = 471/472 (99.79%), Postives = 472/472 (100.00%), Query Frame = 1


Query: 1   MVASTALNCKIPTFSPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNAVSCTLTREP 60
           MVASTALNCKIPTFSPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNAVSCTLTREP
Sbjct: 1   MVASTALNCKIPTFSPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNAVSCTLTREP 60

Query: 61  SLAMEDKVHDSSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELD 120
           SLAMEDKVHDSSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELD
Sbjct: 61  SLAMEDKVHDSSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELD 120

Query: 121 GILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR 180
           GILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR
Sbjct: 121 GILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR 180

Query: 181 LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVH 240
           LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVH
Sbjct: 181 LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVH 240

Query: 241 SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKW 300
           SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKW
Sbjct: 241 SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKW 300

Query: 301 GGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLH 360
           GGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLH
Sbjct: 301 GGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLH 360

Query: 361 GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLS 420
           GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRL+
Sbjct: 361 GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLA 420

Query: 421 RLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV 473
           RLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV
Sbjct: 421 RLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV 472

[Close]

BLAST of Cucsa.356870 vs. NCBI nr
Match: gi|659109059|ref|XP_008454527.1| (PREDICTED: tryptophan synthase beta chain 1 [Cucumis melo])

HSP 1 Score: 927.9 bits (2397), Expect = 6.9e-267
Identity = 460/472 (97.46%), Postives = 464/472 (98.31%), Query Frame = 1


Query: 1   MVASTALNCKIPTFSPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNAVSCTLTREP 60
           MVASTALNCKIPT SPS SHSNNKISSS  HFPVRFRRVSSNPSP+ RSNAVSCTLTREP
Sbjct: 1   MVASTALNCKIPTISPSPSHSNNKISSSIPHFPVRFRRVSSNPSPLLRSNAVSCTLTREP 60

Query: 61  SLAMEDKVHDSSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELD 120
           SLAMEDK+H  SLQQRPDSFGRFGRFGGKYVPETLMHALTELE AFYSLAGDQDFQKELD
Sbjct: 61  SLAMEDKLHTLSLQQRPDSFGRFGRFGGKYVPETLMHALTELEAAFYSLAGDQDFQKELD 120

Query: 121 GILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR 180
           GILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR
Sbjct: 121 GILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR 180

Query: 181 LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVH 240
           LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRM+LLGAEVRPVH
Sbjct: 181 LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVH 240

Query: 241 SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKW 300
           SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKW
Sbjct: 241 SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKW 300

Query: 301 GGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLH 360
           GGKPDVLVACVGGGSNAMGLFHEFVND+DVRLVGVEAAGFGLDSGKHAATLTKGEVGVLH
Sbjct: 301 GGKPDVLVACVGGGSNAMGLFHEFVNDEDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLH 360

Query: 361 GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLS 420
           GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLS
Sbjct: 361 GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLS 420

Query: 421 RLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV 473
           RLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV
Sbjct: 421 RLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV 472

[Close]

BLAST of Cucsa.356870 vs. NCBI nr
Match: gi|727551230|ref|XP_010448179.1| (PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like [Camelina sativa])

HSP 1 Score: 781.6 bits (2017), Expect = 8.0e-223
Identity = 394/472 (83.47%), Postives = 425/472 (90.04%), Query Frame = 1


Query: 4   STALNCKIPTFSPSSSHSNNKISSSTSHFPVR-FRRVSSNPSPVFRSNAVSCTLTREPSL 63
           +TA      TF PS S S+       S F +  F  + S+PS    S +VSCT+ ++PS+
Sbjct: 2   ATATGTATATFRPSVSASSESTHHLRSPFKLPLFTPLPSSPSRFSSSFSVSCTIAKDPSI 61

Query: 64  AM--EDKVHDSSLQQRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQKELD 123
            M  E    DS L QRPDSFGRFG+FGGKYVPETLMHAL+ELETAFYSLA DQDFQKEL 
Sbjct: 62  LMTTESAGSDSRLWQRPDSFGRFGKFGGKYVPETLMHALSELETAFYSLATDQDFQKELA 121

Query: 124 GILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKR 183
            IL+DYVGRESPLYFAERLTEHYRR NGEGP I+LKREDLNHTGAHKINNAVAQALLAKR
Sbjct: 122 EILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKR 181

Query: 184 LGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVH 243
           LGKKRIIAETGAGQHGVATATVCARFGL+CIIYMGAQDMERQALNVFRM+LLGAEVR VH
Sbjct: 182 LGKKRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMRLLGAEVRGVH 241

Query: 244 SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKW 303
           SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQA+EKW
Sbjct: 242 SGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQAMEKW 301

Query: 304 GGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLH 363
           GGKPDVLVACVGGGSNAMGLFHEFV+D ++R++GVEAAGFGLDSGKHAATLTKG+VGVLH
Sbjct: 302 GGKPDVLVACVGGGSNAMGLFHEFVDDTEIRMIGVEAAGFGLDSGKHAATLTKGDVGVLH 361

Query: 364 GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLS 423
           GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHS+LKD+GRAEY+SVTD+EALEAFKR+S
Sbjct: 362 GAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDMGRAEYYSVTDEEALEAFKRVS 421

Query: 424 RLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQV 473
           RLEGIIPALETSHALA+LEKLC TLPDGT+VVLN SGRGDKDVQTAIKYL+V
Sbjct: 422 RLEGIIPALETSHALAHLEKLCSTLPDGTRVVLNFSGRGDKDVQTAIKYLEV 473

[Close]

BLAST of Cucsa.356870 vs. NCBI nr
Match: gi|720020565|ref|XP_010262442.1| (PREDICTED: tryptophan synthase beta chain 1 [Nelumbo nucifera])

HSP 1 Score: 781.2 bits (2016), Expect = 1.0e-222
Identity = 383/447 (85.68%), Postives = 418/447 (93.51%), Query Frame = 1


Query: 26  SSSTSHFPVRFRRVSSNPSPVFRSNAVSCTLTREPSLAMEDKVHDSSLQQRPDSFGRFGR 85
           S ++   P +      +PS  F+ +++SCTLTR+ ++ M +K   S++ QRPDSFGRFG+
Sbjct: 18  SFNSIRVPRKLEESHLSPS-TFKRSSISCTLTRDSAVTMVEKDSKSTVLQRPDSFGRFGK 77

Query: 86  FGGKYVPETLMHALTELETAFYSLAGDQDFQKELDGILRDYVGRESPLYFAERLTEHYRR 145
           +GGKYVPETLMHALTELE AF+SLA D+ FQKELDGILRDYVGRESPLYFAERLTEHY+ 
Sbjct: 78  YGGKYVPETLMHALTELELAFHSLASDEQFQKELDGILRDYVGRESPLYFAERLTEHYKL 137

Query: 146 SNGEGPHIFLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCAR 205
            NGEGP I+LKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCAR
Sbjct: 138 PNGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCAR 197

Query: 206 FGLECIIYMGAQDMERQALNVFRMQLLGAEVRPVHSGTATLKDATSEAIRDWVTNVETTH 265
           FGL+CIIYMGAQDMERQALNVFRM+LLGAEVR VHSGTATLKDATSEAIRDWVTNVE+TH
Sbjct: 198 FGLQCIIYMGAQDMERQALNVFRMRLLGAEVRAVHSGTATLKDATSEAIRDWVTNVESTH 257

Query: 266 YILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFV 325
           YILGSVAGPHPYPMMVR+FHAVIGKETRKQA+EKWGGKPDVLVACVGGGSNAMGLFHEFV
Sbjct: 258 YILGSVAGPHPYPMMVREFHAVIGKETRKQAMEKWGGKPDVLVACVGGGSNAMGLFHEFV 317

Query: 326 NDKDVRLVGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYLLQDDDGQIIEPHSISAGLD 385
           +D DVRL+GVEAAGFGLD+GKHAATLTKGEVGVLHGAMSYLLQDDDGQI+EPHSISAGLD
Sbjct: 318 DDADVRLIGVEAAGFGLDTGKHAATLTKGEVGVLHGAMSYLLQDDDGQIVEPHSISAGLD 377

Query: 386 YPGVGPEHSYLKDLGRAEYHSVTDDEALEAFKRLSRLEGIIPALETSHALAYLEKLCPTL 445
           YPGVGPEHS+LKDLGRAEY+S+TD+EAL+AFKRLSRLEGIIPALETSHALAYLEKLCPTL
Sbjct: 378 YPGVGPEHSFLKDLGRAEYYSITDEEALDAFKRLSRLEGIIPALETSHALAYLEKLCPTL 437

Query: 446 PDGTKVVLNCSGRGDKDVQTAIKYLQV 473
           PDGTKVVLNCSGRGDKDVQTAIKYL+V
Sbjct: 438 PDGTKVVLNCSGRGDKDVQTAIKYLEV 463

[Close]

BLAST of Cucsa.356870 vs. NCBI nr
Match: gi|703083038|ref|XP_010092111.1| (Tryptophan synthase beta chain 2 [Morus notabilis])

HSP 1 Score: 780.4 bits (2014), Expect = 1.8e-222
Identity = 397/475 (83.58%), Postives = 427/475 (89.89%), Query Frame = 1


Query: 1   MVASTALN---CKIPTFSPSSSHSNNKISSSTSHFPVRFRRVSSNPSPVFRSNAVSCTLT 60
           M AST  +   CK    SPS     N  SS  SH P++FR+ +S  +    +  V CTL 
Sbjct: 1   MAASTCCSSTPCK--HHSPSLPKPYNS-SSFPSHLPLKFRKFTSRATA---AATVFCTLA 60

Query: 61  REPSLAMEDKVHDSSLQ-QRPDSFGRFGRFGGKYVPETLMHALTELETAFYSLAGDQDFQ 120
            + + A+  +    SL   RPDSFGRFG++GGKYVPETLM+AL+ELETAF SLAGD DF+
Sbjct: 61  HDAAAAVVMQEAPPSLDLPRPDSFGRFGKYGGKYVPETLMYALSELETAFRSLAGDPDFE 120

Query: 121 KELDGILRDYVGRESPLYFAERLTEHYRRSNGEGPHIFLKREDLNHTGAHKINNAVAQAL 180
           +ELDGIL+DYVGRESPLYFAERLTEHY+R +GEGPHI+LKREDLNHTGAHKINNAVAQAL
Sbjct: 121 RELDGILKDYVGRESPLYFAERLTEHYKRPDGEGPHIYLKREDLNHTGAHKINNAVAQAL 180

Query: 181 LAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMQLLGAEV 240
           LAKRLGK+RIIAETGAGQHGVATATVCARFGL+CIIYMGAQDMERQALNVFRMQLLGAEV
Sbjct: 181 LAKRLGKQRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMQLLGAEV 240

Query: 241 RPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQA 300
           RPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVR+FH VIGKETRKQA
Sbjct: 241 RPVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHKVIGKETRKQA 300

Query: 301 LEKWGGKPDVLVACVGGGSNAMGLFHEFVNDKDVRLVGVEAAGFGLDSGKHAATLTKGEV 360
           LEKWGGKPDVLVACVGGGSNAMGLFHEFV+DKDVRL+GVEAAG+GLDSGKHAATLTKGEV
Sbjct: 301 LEKWGGKPDVLVACVGGGSNAMGLFHEFVDDKDVRLIGVEAAGYGLDSGKHAATLTKGEV 360

Query: 361 GVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSYLKDLGRAEYHSVTDDEALEAF 420
           GVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHS+LKD GRAEY+SVTDDEALEAF
Sbjct: 361 GVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDTGRAEYYSVTDDEALEAF 420

Query: 421 KRLSRLEGIIPALETSHALAYLEKLCPTLPDGTKVVLNCSGRGDKDVQTAIKYLQ 472
           KRLSRLEGIIPALETSHALAYLEKLCPTLP+GTKVVLNCSGRGDKDVQTAIKYLQ
Sbjct: 421 KRLSRLEGIIPALETSHALAYLEKLCPTLPNGTKVVLNCSGRGDKDVQTAIKYLQ 469

The following BLAST results are available for this feature:

BLAST of Cucsa.356870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TRBP2_ARATH	1.1e-221	82.30	Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana GN=TSB2 ...	[more]
TRPB1_ARATH	1.5e-221	83.41	Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana GN=TSB1 ...	[more]
TRPB_CAMAC	5.3e-219	81.97	Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata GN=TSB ...	[more]
TRPB2_MAIZE	1.6e-207	87.94	Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays GN=TSB2 P...	[more]
TRPB1_MAIZE	8.3e-204	88.69	Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays GN=TSB1 PE=2 SV=1	[more]

BLAST of Cucsa.356870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M065_CUCSA	1.2e-273	99.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G660140 PE=3 SV=1	[more]
W9RBZ6_9ROSA	1.2e-222	83.58	Tryptophan synthase beta chain 2 OS=Morus notabilis GN=L484_017799 PE=3 SV=1	[more]
M0ZKI7_SOLTU	1.0e-221	86.58	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400001048 PE=3 SV=1	[more]
R0EWR9_9BRAS	2.3e-221	84.16	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10026347mg PE=3 SV=1	[more]
V4MNP2_EUTSA	8.9e-221	83.23	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10025097mg PE=3 SV=1	[more]

BLAST of Cucsa.356870 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G27070.1	6.5e-223	82.30	tryptophan synthase beta-subunit 2	[more]
AT5G54810.1	8.5e-223	83.41	tryptophan synthase beta-subunit 1	[more]
AT5G28237.1	1.1e-153	64.56	Pyridoxal-5'-phosphate-dependent enzyme family protein	[more]
AT5G38530.1	7.1e-28	30.33	tryptophan synthase beta type 2	[more]

BLAST of Cucsa.356870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449611\|ref\|XP_004142558.1\|	1.7e-273	99.79	PREDICTED: tryptophan synthase beta chain 1 [Cucumis sativus]	[more]
gi\|659109059\|ref\|XP_008454527.1\|	6.9e-267	97.46	PREDICTED: tryptophan synthase beta chain 1 [Cucumis melo]	[more]
gi\|727551230\|ref\|XP_010448179.1\|	8.0e-223	83.47	PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like [Camelina sativa...	[more]
gi\|720020565\|ref\|XP_010262442.1\|	1.0e-222	85.68	PREDICTED: tryptophan synthase beta chain 1 [Nelumbo nucifera]	[more]
gi\|703083038\|ref\|XP_010092111.1\|	1.8e-222	83.58	Tryptophan synthase beta chain 2 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001926	PLP-dep
IPR006653	Trp_synth_b_CS
IPR006654	Trp_synth_beta
IPR023026	Trp_synth_beta/beta-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0004834	tryptophan synthase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006568	tryptophan metabolic process
GO:0000162	tryptophan biosynthetic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009094	L-phenylalanine biosynthetic process
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0006571	tyrosine biosynthetic process
biological_process	GO:0006568	tryptophan metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004834	tryptophan synthase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.356870.1	Cucsa.356870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001926	Tryptophan synthase beta subunit-like PLP-dependent enzyme	PFAM	PF00291	PALP	coord: 128..457 score: 8.9
IPR001926	Tryptophan synthase beta subunit-like PLP-dependent enzyme	unknown	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes	coord: 77..470 score: 1.31E
IPR006653	Tryptophan synthase, beta chain, conserved site	PROSITE	PS00168	TRP_SYNTHASE_BETA	coord: 160..174 scor
IPR006654	Tryptophan synthase, beta chain	TIGRFAMs	TIGR00263	TIGR00263	coord: 81..469 score: 5.6E
IPR023026	Tryptophan synthase beta chain/beta chain-like	HAMAP	MF_00133	Trp_synth_beta	coord: 76..470 score: 53
IPR023026	Tryptophan synthase beta chain/beta chain-like	PIR	PIRSF001413	Trp_syn_beta	coord: 64..472 score: 1.5E
None	No IPR available	GENE3D	G3DSA:3.40.50.1100		coord: 257..471 score: 5.6E-97coord: 178..256 score: 4.5
None	No IPR available	PANTHER	PTHR10314	SER/THR DEHYDRATASE, TRP SYNTHASE	coord: 81..471 score: 3.2E
None	No IPR available	PANTHER	PTHR10314:SF98	TRYPTOPHAN SYNTHASE BETA CHAIN 1, CHLOROPLASTIC-RELATED	coord: 81..471 score: 3.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.356870	Csa1G660140	Cucumber (Chinese Long) v2	cgycuB500
Cucsa.356870	CSPI01G32520	Wild cucumber (PI 183967)	cgycpiB528
Cucsa.356870	Cp4.1LG02g01040	Cucurbita pepo (Zucchini)	cgycpeB0929
Cucsa.356870	CsaV3_1G044710	Cucumber (Chinese Long) v3	cgycucB542

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.356870	Cucurbita maxima (Rimu)	cgycmaB0969
Cucsa.356870	Cucurbita maxima (Rimu)	cgycmaB0970
Cucsa.356870	Cucurbita moschata (Rifu)	cgycmoB0972
Cucsa.356870	Cucurbita moschata (Rifu)	cgycmoB0973
Cucsa.356870	Melon (DHL92) v3.5.1	cgymeB574
Cucsa.356870	Watermelon (Charleston Gray)	cgywcgB605
Cucsa.356870	Watermelon (97103) v1	cgywmB638
Cucsa.356870	Cucurbita pepo (Zucchini)	cgycpeB0928
Cucsa.356870	Bottle gourd (USVL1VR-Ls)	cgylsiB573
Cucsa.356870	Melon (DHL92) v3.6.1	cgymedB575
Cucsa.356870	Silver-seed gourd	carcgyB1085
Cucsa.356870	Watermelon (97103) v2	cgywmbB608
Cucsa.356870	Wax gourd	cgywgoB709