Cucsa.356180 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.356180
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionTubulin-specific chaperone E, putative
Locationscaffold03577 : 920782 .. 922468 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTTCAAGTAATACTTGTGAGTTGCAAGTCTTACTTGGTCATGTTAACACCGTTGATAGGCTTGTTAAGAGGACTCTGCTTGTTGGGCCGTTTGGTTGCTTGCTTTGTCAGGAGGCGGAGGGACACCTTGATCATCTCTTTTGGGATTGCTAGTACATGTGTGCTGTGCGAAGCTCTTTTCTGTAGGAGTTTGGCCTTAACTTTGTTGGTCGAAGGAGTGCCCGTGCTACGTCAAGGAGCTCCTCCTCCATCCGCCCTTCAGAGAGAAAGGGTGCTTTTTGTGGCTCGTAGAGGTGTGTGTCGTGATTGGGAGGAGAGGAATGATTGGGTTTTTCGTGGTAAGGAAAGGGACCAAAGGGAGGTTTGGGATTTGATTAGATTTCATTTGTTCCTTCGGGCCTCAATTTTGAGGACCTTTTGTAATTATTCCGTAGGTTACATTTTGATTAGTTGGACCTCCTTTCTTTAGGCGAGCTGTTTTGGTGGGCTGGTTTTTTTTATTCCTTTGTATTCTTTCATTCTTTCTCAATTAAATAAGTTGTTTCTATAAAAAAAACGCTCGTGAGTTGTAGAAATGAATTAAACAATGGAAGGATTTATAAAGTCAATTAGTCCAATTAATTTGTTCATTATTGTTTGTCACTTTCTTGTGCGCATCTATGCTACTCCTTGTAAACTTTTGTTTCTGTTGTGATCTCATTTTCAGCCTGAATCGTCTTCTATGGTTGAAGGATTTAATCTTCTGCGGCTTTTAAATCTGGAAAATAACTGTATAGCTGAGTGGAACGAAATATTGAAACTTGGTCAATTAAAAAGGTATTGTTTTTATTATTTTGGTCTTTTATTGATTCAACTTGGAGGTTGATGAACACTGGTTTGTTGCATATTTCTTTGGATCGTTTGACTATGCTATCAGCTTGGAGCAGATTCAGTTAAATAACAACAAATTGAGCCATATATTTTATCCCAACTTGAATGAATTGCACGAGTTATTTGGAGATGTTGAATCACAAGGAGATTGTTTTCCATTTCAAAATTTGCGATGCCTCTTTCTCGGTTGAGTATCAAGGTTCTTTAACAATTGATGTCCCTGTGGAGATTGTTTTAATTAGCTCTCTAACTTGTGTTTCTTTATGTACTTCAGGAGGCAACAACATTGATCATTTGGCTTCTATTGATGTCTTAAACTCATTCCCTAATTTGATTGTAAGATTTTATTGAAGATGGTTTTGACTTGTGAATACTTCATATGTTATAACAAACAATACAAGAGATAGTTGTTATAGTTGAGTTAAAAAAAACAATAACATTGGAAGACACATTATAGATTCTACATTGCAGCATCGTGCTCTTTTTCACTCACTTCTATCAATTCTTATATTTTATTTATTTCTTTTTCCTTCAAGGACATCAGGCTTTCAGAGAATCCGATAGCTGATCCCATGAGGGGTGGGATTCCCAGATATGTTTTAGTTGCACGATTGTCCAAAATTCAAGTTATAAATGGGAGTGAGGTTGTTTGGAAGCATTTGAAGCCCTTTTCTTTTTGCATCATTACATTATCGTTAACCGAAAAACTTTTATCTCATATATTAGGTAACTCCTCGTGAAAGAAGGGACTCTGAAATACGGTATGGAAAACAATATTTTGAGTTCTTGTCTATTTCTTTATTTTGTTTGCATTAG

mRNA sequence

TCTTTCAAGTAATACTTGTGAGTTgcaagtcttacttggtcatgttaacaccgttgataggcttgttaagaggactctgcttgttgggccgtttgCCTGAATCGTCTTCTATGGTTGAAGGATTTAATCTTCTGCGGCTTTTAAATCTGGAAAATAACTGTATAGCTGAGTGGAACGAAATATTGAAACTTGGTCAATTAAAAAGCTTGGAGCAGATTCAGTTAAATAACAACAAATTGAGCCATATATTTTATCCCAACTTGAATGAATTGCACGACTCTCTAACTTGTGTTTCTTTATGTACTTCAGGAGGCAACAACATTGATCATTTGGCTTCTATTGATGTCTTAAACTCATTCCCTAATTTGATTGACATCAGGCTTTCAGAGAATCCGATAGCTGATCCCATGAGGGGTGGGATTCCCAGATATGTTTTAGTTGCACGATTGTCCAAAATTCAAGTTATAAATGGGAGTGAGGTAACTCCTCGTGAAAGAAGGGACTCTGAAATACGGTATGGAAAACAATATTTTGAGTTCTTGTCTATTTCTTTATTTTGTTTGCATTAG

Coding sequence (CDS)

TCTTTCAAGTAATACTTGTGAGTTGCAAGTCTTACTTGGTCATGTTAACACCGTTGATAGGCTTGTTAAGAGGACTCTGCTTGTTGGGCCGTTTGCCTGAATCGTCTTCTATGGTTGAAGGATTTAATCTTCTGCGGCTTTTAAATCTGGAAAATAACTGTATAGCTGAGTGGAACGAAATATTGAAACTTGGTCAATTAAAAAGCTTGGAGCAGATTCAGTTAAATAACAACAAATTGAGCCATATATTTTATCCCAACTTGAATGAATTGCACGACTCTCTAACTTGTGTTTCTTTATGTACTTCAGGAGGCAACAACATTGATCATTTGGCTTCTATTGATGTCTTAAACTCATTCCCTAATTTGATTGACATCAGGCTTTCAGAGAATCCGATAGCTGATCCCATGAGGGGTGGGATTCCCAGATATGTTTTAGTTGCACGATTGTCCAAAATTCAAGTTATAAATGGGAGTGAGGTAACTCCTCGTGAAAGAAGGGACTCTGAAATACGGTATGGAAAACAATATTTTGAGTTCTTGTCTATTTCTTTATTTTGTTTGCATTAG

Protein sequence

FQVILVSCKSYLVMLTPLIGLLRGLCLLGRLPESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNELHDSLTCVSLCTSGGNNIDHLASIDVLNSFPNLIDIRLSENPIADPMRGGIPRYVLVARLSKIQVINGSEVTPRERRDSEIRYGKQYFEFLSISLFCLH*
Homology
[Close]
BLAST of Cucsa.356180 vs. Swiss-Prot
Match: TBCE_ARATH (Tubulin-folding cofactor E OS=Arabidopsis thaliana GN=TFCE PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.0e-40
Identity = 89/147 (60.54%), Postives = 111/147 (75.51%), Query Frame = 1 

Query: 34  SSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYP-NLNELHD 93
           SSS  + FN LRLLNL++NCI++W+E+LKL QL  LEQ+ LN NKLS IF   N  E  +
Sbjct: 253 SSSDDQAFNSLRLLNLDDNCISDWSEVLKLSQLPCLEQLYLNKNKLSRIFQSVNGTESSE 312

Query: 94  -------SLTCVSLCTSGGNNIDHLASIDVLNSFPNLIDIRLSENPIADPMRGGIPRYVL 153
                  SL+C+ L   G NNI  LAS+D LN FP L+DIRLSENPI+DP+RGG+PR+VL
Sbjct: 313 KGSDPFPSLSCLLL---GANNIGDLASVDALNGFPQLVDIRLSENPISDPVRGGVPRFVL 372

Query: 154 VARLSKIQVINGSEVTPRERRDSEIRY 173
           VARL+K+QV+NGSEV  RE++DSEIRY
Sbjct: 373 VARLTKVQVLNGSEVRAREKKDSEIRY 396


HSP 2 Score: 29.3 bits (64), Expect = 5.8e+01
Identity = 17/38 (44.74%), Postives = 24/38 (63.16%), Query Frame = 1 

Query: 44  LRLLNLENNCIAEWNEILKL-GQLKSLEQIQLNNNKLS 81
           L+LL+L  N I++W EI  L  QL +L  + L+ N LS
Sbjct: 162 LKLLDLTGNLISDWEEIGALCEQLPALTTLNLSCNSLS 199

[Close]
BLAST of Cucsa.356180 vs. Swiss-Prot
Match: TBCEL_RAT (Tubulin-specific chaperone cofactor E-like protein OS=Rattus norvegicus GN=Tbcel PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.4e-13
Identity = 55/135 (40.74%), Postives = 76/135 (56.30%), Query Frame = 1 

Query: 44  LRLLNLENNCIAEWNEILKLGQL-KSLEQIQLNNNKLSHIFYP--NLNELHDSLTCVSLC 103
           L+LL++ +N + EW EI KLG +  SL+ + L NN ++ I  P  +L  L  +L  +SL 
Sbjct: 176 LKLLHITDNNLQEWTEIRKLGVMFPSLDTLVLANNHVNAIEEPADSLARLFPNLRSISLH 235

Query: 104 TSGGNNIDHLASIDVLNSFPNLIDIRLSENPIADPMRGGIPRYVLVARLSKIQVINGSEV 163
            SG   +     ID LNSFP L ++RL   P+  P      R ++VARL  +  +NGS V
Sbjct: 236 KSG---LQSWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEERRKLVVARLPSVSKLNGSVV 295

Query: 164 TPRERRDSE---IRY 173
           T  ER DSE   IRY
Sbjct: 296 TDGEREDSERFFIRY 307

[Close]
BLAST of Cucsa.356180 vs. Swiss-Prot
Match: TBCEL_MOUSE (Tubulin-specific chaperone cofactor E-like protein OS=Mus musculus GN=Tbcel PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.4e-13
Identity = 55/135 (40.74%), Postives = 76/135 (56.30%), Query Frame = 1 

Query: 44  LRLLNLENNCIAEWNEILKLGQL-KSLEQIQLNNNKLSHIFYP--NLNELHDSLTCVSLC 103
           L+LL++ +N + +W EI KLG +  SL+ + L NN L+ I  P  +L  L  +L  +SL 
Sbjct: 176 LKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPADSLARLFPNLRSISLH 235

Query: 104 TSGGNNIDHLASIDVLNSFPNLIDIRLSENPIADPMRGGIPRYVLVARLSKIQVINGSEV 163
            SG   +     ID LNSFP L ++RL   P+  P      R ++VARL  +  +NGS V
Sbjct: 236 KSG---LQSWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEERRKLVVARLPSVSKLNGSVV 295

Query: 164 TPRERRDSE---IRY 173
           T  ER DSE   IRY
Sbjct: 296 TDGEREDSERFFIRY 307

[Close]
BLAST of Cucsa.356180 vs. Swiss-Prot
Match: TBCEL_HUMAN (Tubulin-specific chaperone cofactor E-like protein OS=Homo sapiens GN=TBCEL PE=1 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 3.2e-13
Identity = 54/135 (40.00%), Postives = 76/135 (56.30%), Query Frame = 1 

Query: 44  LRLLNLENNCIAEWNEILKLGQL-KSLEQIQLNNNKLSHIFYPN--LNELHDSLTCVSLC 103
           L+LL++ +N + +W EI KLG +  SL+ + L NN L+ I  P+  L  L  +L  +SL 
Sbjct: 176 LKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPDDSLARLFPNLRSISLH 235

Query: 104 TSGGNNIDHLASIDVLNSFPNLIDIRLSENPIADPMRGGIPRYVLVARLSKIQVINGSEV 163
            SG   +     ID LNSFP L ++RL   P+  P      R +++ARL  +  +NGS V
Sbjct: 236 KSG---LQSWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEERRKLVIARLPSVSKLNGSVV 295

Query: 164 TPRERRDSE---IRY 173
           T  ER DSE   IRY
Sbjct: 296 TDGEREDSERFFIRY 307

[Close]
BLAST of Cucsa.356180 vs. Swiss-Prot
Match: TBCE_XENLA (Tubulin-specific chaperone E OS=Xenopus laevis GN=tbce PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-09
Identity = 39/142 (27.46%), Postives = 78/142 (54.93%), Query Frame = 1 

Query: 38  VEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNELHDSL--T 97
           V     L +L++ NN I + N++  +  L  L+Q+ ++NN +S I +P+++  H ++  +
Sbjct: 244 VNNLQNLTILDISNNKIVDGNQLHTIAFLPRLKQVIVSNNIISSISFPDVDFGHTAMFIS 303

Query: 98  CVSLCTSGGNNIDHLASIDVLNSFPNLIDIRLSENPIADPMRGG-IPRYVLVARLSKIQV 157
             SL  +G NNI     I+ L+   +L  +    NP+ D  +     R +++A++  ++ 
Sbjct: 304 LTSLAVNG-NNISEWCVINELHKLLHLESLNCHGNPLMDLDKNPETVRQLIIAKIENLKF 363

Query: 158 INGSEVTPRERRDSEIRYGKQY 177
           +N +E+ P ERR +E+ Y K +
Sbjct: 364 LNKTEIFPTERRGAELDYRKMF 384

[Close]
BLAST of Cucsa.356180 vs. TrEMBL
Match: A0A0A0LXN7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G650070 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.2e-74
Identity = 149/172 (86.63%), Postives = 152/172 (88.37%), Query Frame = 1 

Query: 32  PESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNELH 91
           PESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNELH
Sbjct: 7   PESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNELH 66

Query: 92  D---------------SLTCVSLCTSGGNNIDHLASIDVLNSFPNLIDIRLSENPIADPM 151
           +               +L C+ L   GGNNIDHLASIDVLNSFPNLIDIRLSENPIADPM
Sbjct: 67  ELFGDVESQGDCFPFQNLRCLFL---GGNNIDHLASIDVLNSFPNLIDIRLSENPIADPM 126

Query: 152 RGGIPRYVLVARLSKIQVINGSEVTPRERRDSEIRYGKQYFEFLSISLFCLH 189
           RGGIPRYVLVARLSKIQVINGSEVTPRERRDSEIRYGKQYFEFLSISLFCLH
Sbjct: 127 RGGIPRYVLVARLSKIQVINGSEVTPRERRDSEIRYGKQYFEFLSISLFCLH 175

[Close]
BLAST of Cucsa.356180 vs. TrEMBL
Match: A0A0S3S4A9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G104700 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.0e-46
Identity = 98/149 (65.77%), Postives = 121/149 (81.21%), Query Frame = 1 

Query: 31  LPESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNEL 90
           LP SSS V+GF+ LRLLNLENNCI EWNEI+KL QL+ LE++ LN N L+ +FYP+ NE 
Sbjct: 250 LPGSSSTVQGFDCLRLLNLENNCIDEWNEIMKLSQLRCLEKLYLNKNCLNSLFYPDNNER 309

Query: 91  HDS-LTCV----SLCTS--GGNNIDHLASIDVLNSFPNLIDIRLSENPIADPMRGGIPRY 150
           ++S +TC     +LC    G NNID LASID LN FP+L+DIRLSENPI DP RGG+PR+
Sbjct: 310 YESEVTCYKPFQNLCRLLLGNNNIDDLASIDSLNLFPSLVDIRLSENPITDPRRGGVPRF 369

Query: 151 VLVARLSKIQVINGSEVTPRERRDSEIRY 173
           VL+ARL+K+Q++NGSEVTPRER+DSEIRY
Sbjct: 370 VLIARLAKVQILNGSEVTPRERKDSEIRY 398

[Close]
BLAST of Cucsa.356180 vs. TrEMBL
Match: A0A0L9VDW1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g185200 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.0e-46
Identity = 98/149 (65.77%), Postives = 121/149 (81.21%), Query Frame = 1 

Query: 31  LPESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNEL 90
           LP SSS V+GF+ LRLLNLENNCI EWNEI+KL QL+ LE++ LN N L+ +FYP+ NE 
Sbjct: 250 LPGSSSTVQGFDCLRLLNLENNCIDEWNEIMKLSQLRCLEKLYLNKNCLNSLFYPDNNER 309

Query: 91  HDS-LTCV----SLCTS--GGNNIDHLASIDVLNSFPNLIDIRLSENPIADPMRGGIPRY 150
           ++S +TC     +LC    G NNID LASID LN FP+L+DIRLSENPI DP RGG+PR+
Sbjct: 310 YESEVTCYKPFQNLCRLLLGNNNIDDLASIDSLNLFPSLVDIRLSENPITDPRRGGVPRF 369

Query: 151 VLVARLSKIQVINGSEVTPRERRDSEIRY 173
           VL+ARL+K+Q++NGSEVTPRER+DSEIRY
Sbjct: 370 VLIARLAKVQILNGSEVTPRERKDSEIRY 398

[Close]
BLAST of Cucsa.356180 vs. TrEMBL
Match: V7BSG0_PHAVU (Uncharacterized protein (Fragment) OS=Phaseolus vulgaris GN=PHAVU_006G130900g PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.7e-45
Identity = 99/171 (57.89%), Postives = 128/171 (74.85%), Query Frame = 1 

Query: 14  MLTPLIGLLRGLCLLGR-----LPESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKS 73
           +L P +  +  L ++G      LP SSSMV+GF+ LRLLNLE+NCI EWNEI+KL QL+ 
Sbjct: 228 LLRPSLTTIEELHIMGNNISRILPTSSSMVQGFDYLRLLNLEDNCIDEWNEIMKLSQLRC 287

Query: 74  LEQIQLNNNKLSHIFYPNLNELHDS-LTCV----SLCTS--GGNNIDHLASIDVLNSFPN 133
           LE++ LN N L+ +FYP+  E H+S +TC     +LC    G NNI  LAS+D LN FPN
Sbjct: 288 LEKLYLNKNCLNSLFYPDNKEQHESEVTCYKPFQNLCRLLLGNNNIGDLASVDSLNLFPN 347

Query: 134 LIDIRLSENPIADPMRGGIPRYVLVARLSKIQVINGSEVTPRERRDSEIRY 173
           L+DIRLSENPI D  +GG+PR+VL+ARL+K+Q++NGSEVTPRER+DSEIRY
Sbjct: 348 LVDIRLSENPITDSRKGGVPRFVLIARLAKVQILNGSEVTPRERKDSEIRY 398

[Close]
BLAST of Cucsa.356180 vs. TrEMBL
Match: V7BNH3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G130900g PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 4.9e-45
Identity = 99/173 (57.23%), Postives = 128/173 (73.99%), Query Frame = 1 

Query: 14  MLTPLIGLLRGLCLLGR-----LPESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKS 73
           +L P +  +  L ++G      LP SSSMV+GF+ LRLLNLE+NCI EWNEI+KL QL+ 
Sbjct: 228 LLRPSLTTIEELHIMGNNISRILPTSSSMVQGFDYLRLLNLEDNCIDEWNEIMKLSQLRC 287

Query: 74  LEQIQLNNNKLSHIFYPNLNELHDS-LTCV----SLCTS--GGNNIDHLASIDVLNSFPN 133
           LE++ LN N L+ +FYP+  E H+S +TC     +LC    G NNI  LAS+D LN FPN
Sbjct: 288 LEKLYLNKNCLNSLFYPDNKEQHESEVTCYKPFQNLCRLLLGNNNIGDLASVDSLNLFPN 347

Query: 134 LIDIRLSENPIADPMRGGIPRYVLVARLSKIQVINGSEVTPRERRDSEIRYGK 175
           L+DIRLSENPI D  +GG+PR+VL+ARL+K+Q++NGSEVTPRER+DSEIR  K
Sbjct: 348 LVDIRLSENPITDSRKGGVPRFVLIARLAKVQILNGSEVTPRERKDSEIRTAK 400

[Close]
BLAST of Cucsa.356180 vs. TAIR10
Match: AT1G71440.1 (AT1G71440.1 tubulin folding cofactor E / Pfifferling (PFI))

HSP 1 Score: 167.9 bits (424), Expect = 5.9e-42
Identity = 89/147 (60.54%), Postives = 111/147 (75.51%), Query Frame = 1 

Query: 34  SSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYP-NLNELHD 93
           SSS  + FN LRLLNL++NCI++W+E+LKL QL  LEQ+ LN NKLS IF   N  E  +
Sbjct: 253 SSSDDQAFNSLRLLNLDDNCISDWSEVLKLSQLPCLEQLYLNKNKLSRIFQSVNGTESSE 312

Query: 94  -------SLTCVSLCTSGGNNIDHLASIDVLNSFPNLIDIRLSENPIADPMRGGIPRYVL 153
                  SL+C+ L   G NNI  LAS+D LN FP L+DIRLSENPI+DP+RGG+PR+VL
Sbjct: 313 KGSDPFPSLSCLLL---GANNIGDLASVDALNGFPQLVDIRLSENPISDPVRGGVPRFVL 372

Query: 154 VARLSKIQVINGSEVTPRERRDSEIRY 173
           VARL+K+QV+NGSEV  RE++DSEIRY
Sbjct: 373 VARLTKVQVLNGSEVRAREKKDSEIRY 396


HSP 2 Score: 29.3 bits (64), Expect = 3.3e+00
Identity = 17/38 (44.74%), Postives = 24/38 (63.16%), Query Frame = 1 

Query: 44  LRLLNLENNCIAEWNEILKL-GQLKSLEQIQLNNNKLS 81
           L+LL+L  N I++W EI  L  QL +L  + L+ N LS
Sbjct: 162 LKLLDLTGNLISDWEEIGALCEQLPALTTLNLSCNSLS 199

[Close]
BLAST of Cucsa.356180 vs. NCBI nr
Match: gi|700211524|gb|KGN66620.1| (hypothetical protein Csa_1G650070 [Cucumis sativus])

HSP 1 Score: 286.6 bits (732), Expect = 3.2e-74
Identity = 149/172 (86.63%), Postives = 152/172 (88.37%), Query Frame = 1 

Query: 32  PESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNELH 91
           PESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNELH
Sbjct: 7   PESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNELH 66

Query: 92  D---------------SLTCVSLCTSGGNNIDHLASIDVLNSFPNLIDIRLSENPIADPM 151
           +               +L C+ L   GGNNIDHLASIDVLNSFPNLIDIRLSENPIADPM
Sbjct: 67  ELFGDVESQGDCFPFQNLRCLFL---GGNNIDHLASIDVLNSFPNLIDIRLSENPIADPM 126

Query: 152 RGGIPRYVLVARLSKIQVINGSEVTPRERRDSEIRYGKQYFEFLSISLFCLH 189
           RGGIPRYVLVARLSKIQVINGSEVTPRERRDSEIRYGKQYFEFLSISLFCLH
Sbjct: 127 RGGIPRYVLVARLSKIQVINGSEVTPRERRDSEIRYGKQYFEFLSISLFCLH 175

[Close]
BLAST of Cucsa.356180 vs. NCBI nr
Match: gi|778663990|ref|XP_011660191.1| (PREDICTED: tubulin-folding cofactor E isoform X2 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 3.9e-64
Identity = 133/156 (85.26%), Postives = 136/156 (87.18%), Query Frame = 1 

Query: 32  PESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNELH 91
           PESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNELH
Sbjct: 251 PESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNELH 310

Query: 92  D---------------SLTCVSLCTSGGNNIDHLASIDVLNSFPNLIDIRLSENPIADPM 151
           +               +L C+ L   GGNNIDHLASIDVLNSFPNLIDIRLSENPIADPM
Sbjct: 311 ELFGDVESQGDCFPFQNLRCLFL---GGNNIDHLASIDVLNSFPNLIDIRLSENPIADPM 370

Query: 152 RGGIPRYVLVARLSKIQVINGSEVTPRERRDSEIRY 173
           RGGIPRYVLVARLSKIQVINGSEVTPRERRDSEIRY
Sbjct: 371 RGGIPRYVLVARLSKIQVINGSEVTPRERRDSEIRY 403

[Close]
BLAST of Cucsa.356180 vs. NCBI nr
Match: gi|778663987|ref|XP_011660189.1| (PREDICTED: tubulin-folding cofactor E isoform X1 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 3.9e-64
Identity = 133/156 (85.26%), Postives = 136/156 (87.18%), Query Frame = 1 

Query: 32  PESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNELH 91
           PESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNELH
Sbjct: 277 PESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNELH 336

Query: 92  D---------------SLTCVSLCTSGGNNIDHLASIDVLNSFPNLIDIRLSENPIADPM 151
           +               +L C+ L   GGNNIDHLASIDVLNSFPNLIDIRLSENPIADPM
Sbjct: 337 ELFGDVESQGDCFPFQNLRCLFL---GGNNIDHLASIDVLNSFPNLIDIRLSENPIADPM 396

Query: 152 RGGIPRYVLVARLSKIQVINGSEVTPRERRDSEIRY 173
           RGGIPRYVLVARLSKIQVINGSEVTPRERRDSEIRY
Sbjct: 397 RGGIPRYVLVARLSKIQVINGSEVTPRERRDSEIRY 429

[Close]
BLAST of Cucsa.356180 vs. NCBI nr
Match: gi|659090381|ref|XP_008445986.1| (PREDICTED: tubulin-folding cofactor E isoform X1 [Cucumis melo])

HSP 1 Score: 245.7 bits (626), Expect = 6.3e-62
Identity = 128/156 (82.05%), Postives = 135/156 (86.54%), Query Frame = 1 

Query: 32  PESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNELH 91
           PESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQL+SLEQIQLNNNKLSHIFYPNL+ELH
Sbjct: 292 PESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLRSLEQIQLNNNKLSHIFYPNLDELH 351

Query: 92  D---------------SLTCVSLCTSGGNNIDHLASIDVLNSFPNLIDIRLSENPIADPM 151
           +               +L C+ L   GGNNID LASIDVLNSFPNLIDIRLSENPIADPM
Sbjct: 352 ELFGDVELQGDCFPFQNLRCLFL---GGNNIDDLASIDVLNSFPNLIDIRLSENPIADPM 411

Query: 152 RGGIPRYVLVARLSKIQVINGSEVTPRERRDSEIRY 173
           RGGIPRYVL+ARLSKIQ+INGSEVTPRERRDSEIRY
Sbjct: 412 RGGIPRYVLIARLSKIQIINGSEVTPRERRDSEIRY 444

[Close]
BLAST of Cucsa.356180 vs. NCBI nr
Match: gi|659090385|ref|XP_008445988.1| (PREDICTED: tubulin-folding cofactor E isoform X3 [Cucumis melo])

HSP 1 Score: 245.7 bits (626), Expect = 6.3e-62
Identity = 128/156 (82.05%), Postives = 135/156 (86.54%), Query Frame = 1 

Query: 32  PESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLKSLEQIQLNNNKLSHIFYPNLNELH 91
           PESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQL+SLEQIQLNNNKLSHIFYPNL+ELH
Sbjct: 251 PESSSMVEGFNLLRLLNLENNCIAEWNEILKLGQLRSLEQIQLNNNKLSHIFYPNLDELH 310

Query: 92  D---------------SLTCVSLCTSGGNNIDHLASIDVLNSFPNLIDIRLSENPIADPM 151
           +               +L C+ L   GGNNID LASIDVLNSFPNLIDIRLSENPIADPM
Sbjct: 311 ELFGDVELQGDCFPFQNLRCLFL---GGNNIDDLASIDVLNSFPNLIDIRLSENPIADPM 370

Query: 152 RGGIPRYVLVARLSKIQVINGSEVTPRERRDSEIRY 173
           RGGIPRYVL+ARLSKIQ+INGSEVTPRERRDSEIRY
Sbjct: 371 RGGIPRYVLIARLSKIQIINGSEVTPRERRDSEIRY 403

The following BLAST results are available for this feature:
BLAST of Cucsa.356180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TBCE_ARATH1.0e-4060.54Tubulin-folding cofactor E OS=Arabidopsis thaliana GN=TFCE PE=2 SV=1[more]
TBCEL_RAT2.4e-1340.74Tubulin-specific chaperone cofactor E-like protein OS=Rattus norvegicus GN=Tbcel... [more]
TBCEL_MOUSE2.4e-1340.74Tubulin-specific chaperone cofactor E-like protein OS=Mus musculus GN=Tbcel PE=1... [more]
TBCEL_HUMAN3.2e-1340.00Tubulin-specific chaperone cofactor E-like protein OS=Homo sapiens GN=TBCEL PE=1... [more]
TBCE_XENLA1.6e-0927.46Tubulin-specific chaperone E OS=Xenopus laevis GN=tbce PE=2 SV=1[more]
BLAST of Cucsa.356180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXN7_CUCSA2.2e-7486.63Uncharacterized protein OS=Cucumis sativus GN=Csa_1G650070 PE=4 SV=1[more]
A0A0S3S4A9_PHAAN2.0e-4665.77Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G104700 PE=... [more]
A0A0L9VDW1_PHAAN2.0e-4665.77Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g185200 PE=4 SV=1[more]
V7BSG0_PHAVU1.7e-4557.89Uncharacterized protein (Fragment) OS=Phaseolus vulgaris GN=PHAVU_006G130900g PE... [more]
V7BNH3_PHAVU4.9e-4557.23Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G130900g PE=4 SV=1[more]
BLAST of Cucsa.356180 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G71440.15.9e-4260.54 tubulin folding cofactor E / Pfifferling (PFI)[more]
BLAST of Cucsa.356180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211524|gb|KGN66620.1|3.2e-7486.63hypothetical protein Csa_1G650070 [Cucumis sativus][more]
gi|778663990|ref|XP_011660191.1|3.9e-6485.26PREDICTED: tubulin-folding cofactor E isoform X2 [Cucumis sativus][more]
gi|778663987|ref|XP_011660189.1|3.9e-6485.26PREDICTED: tubulin-folding cofactor E isoform X1 [Cucumis sativus][more]
gi|659090381|ref|XP_008445986.1|6.3e-6282.05PREDICTED: tubulin-folding cofactor E isoform X1 [Cucumis melo][more]
gi|659090385|ref|XP_008445988.1|6.3e-6282.05PREDICTED: tubulin-folding cofactor E isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.356180.1Cucsa.356180.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15140TUBULIN-SPECIFIC CHAPERONE Ecoord: 34..172
score: 5.8
NoneNo IPR availablePANTHERPTHR15140:SF6PROTEIN COEL-1, ISOFORM Acoord: 34..172
score: 5.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.356180Csa1G650070Cucumber (Chinese Long) v2cgycuB500
Cucsa.356180CSPI01G31770Wild cucumber (PI 183967)cgycpiB528
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.356180Cucumber (Chinese Long) v3cgycucB542
Cucsa.356180Watermelon (97103) v2cgywmbB611
Cucsa.356180Wax gourdcgywgoB710
Cucsa.356180Wax gourdcgywgoB711
Cucsa.356180Cucurbita maxima (Rimu)cgycmaB0969
Cucsa.356180Cucurbita maxima (Rimu)cgycmaB0970
Cucsa.356180Cucurbita moschata (Rifu)cgycmoB0972
Cucsa.356180Cucurbita moschata (Rifu)cgycmoB0973
Cucsa.356180Melon (DHL92) v3.5.1cgymeB574
Cucsa.356180Watermelon (Charleston Gray)cgywcgB605
Cucsa.356180Watermelon (Charleston Gray)cgywcgB607
Cucsa.356180Watermelon (97103) v1cgywmB639
Cucsa.356180Watermelon (97103) v1cgywmB641
Cucsa.356180Cucurbita pepo (Zucchini)cgycpeB0927
Cucsa.356180Cucurbita pepo (Zucchini)cgycpeB0928
Cucsa.356180Bottle gourd (USVL1VR-Ls)cgylsiB573
Cucsa.356180Melon (DHL92) v3.6.1cgymedB575
Cucsa.356180Silver-seed gourdcarcgyB0613
Cucsa.356180Silver-seed gourdcarcgyB1085