Cucsa.349890 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.349890
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionDof zinc finger protein
Locationscaffold03487 : 1095469 .. 1096992 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAAACCCTAATTATCCATGCAAATTGGAGATGAAGGTGGCCAAAGCAACAACAACAAAGGCTCCAAAAGAGCAATTGGATTGCCCAAGATGCAAGTCTAACAACACCAAATTTTGTTATTACAACAATTACAGCCTCAATCAACCAAGATACTTTTGCAAATCTTGTAGAAGGTATTGGACTGAAGGAGGGTCCCTCAGAAATGTCCCCATTGGAGGAGCTTCAAGAAAGAACAGATCAAAGTCATCATCAACAACAACAATTACAACAACAAGTACTTCTTCTTCATCTGATTATTTCTGCAGTAACAATAACAAGAACCAAAAATTACCAAATTACCCTTCTTCATCTCAAATTTCTACTCAAATCCCAGTTGGATTAAGAGATCTTAATCTTGCTGATCATGATCACCTCCCTAAGGTTGAAAATGTCAATTATAATAATTTTGCATTTGGTTTTAGGGGTTTGAGTTCTTTTATCCCTAATCTAATGCCAAATTCCAATCATATTAATAATAATGGTAATTTGGGGATTAATAGTAATAGCCAATATCCATCAAGTGGGTTTTCTTTGGGTGATCACGTTGATGAGTTTAAGCCAAGTTTTGGAATCAATTCTGTTGATGGAAGAAACTTATTGCAGCTTCCTTTTCAAGAATTGAACCAACAATCTGCTGCCCCAAATGAAGGTGATCATCAAAATTGGAGTGAGATGCTTGGGGGTGGATCATTGTAAGAATGTCCTTTTTCTAAAAAAATTTAATTTCAAACCCTAGATATCCTTTTCCTATGATAATTATGAAGTTTCATGGAATGAACTAGTAAACAATGTTTCGTACATGGTGGATCTCTTTTCATTACTAGAGATCTAAGAATTTACTTGAGCCTTTTGGTTTGTAAATTTTTGTGATGAAAATTAGATATACATATATGTGCTTATTTAATTTGCTGATTTTTTTCTTTGTTTTATATACTAATAAAAATACCATTTTGAATCATATTCAATAAGATTTGGGCAATTGCTCAAATGTACATTTGCAAGAAGTTAGAAACTAAAACAAAGAAAAGAAAAACAAGTGGTATATGCATGCAAACACATTCAAATTTGATAAGATACCAAAGTTCCTATTTGAGAGTGGTTTTGAAATTGTTAATCCATTTTTATCGTATTTTAATGTTTAATTTTACACACTATTGAATGTAATTTCCATATCACTAAGTTAAAACATGTTTAAGAGTCAATAATTAAAGTGATATTAACAAGGGTAGAAATCACTCCCAAACATATTGTTCATAATAATTCATTACATTTACATTGTTTAAACTTTACCTTGTTTAAACGATTTACAAAAATGTTACTTTTTATTTTTAATAAAGCTTAATTAATCTATATTTTCATATCCGGATAAAATATAAAATTTTGTTTTATATTTTATAAATATTTTTAGAAGTTCTTCTATTTACAATAATTTTCACACATATATGAAAGGGTGTTTGATGGAGGTCAAAAGGAGCCAAATTAG

mRNA sequence

AGAAAAACCCTAATTATCCATGCAAATTGGAGATGAAGGTGGCCAAAGCAACAACAACAAAGGCTCCAAAAGAGCAATTGGATTGCCCAAGATGCAAGTCTAACAACACCAAATTTTGTTATTACAACAATTACAGCCTCAATCAACCAAGATACTTTTGCAAATCTTGTAGAAGGTATTGGACTGAAGGAGGGTCCCTCAGAAATGTCCCCATTGGAGGAGCTTCAAGAAAGAACAGATCAAAGTCATCATCAACAACAACAATTACAACAACAAGTACTTCTTCTTCATCTGATTATTTCTGCAGTAACAATAACAAGAACCAAAAATTACCAAATTACCCTTCTTCATCTCAAATTTCTACTCAAATCCCAGTTGGATTAAGAGATCTTAATCTTGCTGATCATGATCACCTCCCTAAGGTTGAAAATGTCAATTATAATAATTTTGCATTTGGTTTTAGGGGTTTGAGTTCTTTTATCCCTAATCTAATGCCAAATTCCAATCATATTAATAATAATGGTAATTTGGGGATTAATAGTAATAGCCAATATCCATCAAGTGGGTTTTCTTTGGGTGATCACGTTGATGAGTTTAAGCCAAGTTTTGGAATCAATTCTGTTGATGGAAGAAACTTATTGCAGCTTCCTTTTCAAGAATTGAACCAACAATCTGCTGCCCCAAATGAAGGTGATCATCAAAATTGGAGTGAGATGCTTGGGGGTGGATCATTGGTGTTTGATGGAGGTCAAAAGGAGCCAAATTAG

Coding sequence (CDS)

AGAAAAACCCTAATTATCCATGCAAATTGGAGATGAAGGTGGCCAAAGCAACAACAACAAAGGCTCCAAAAGAGCAATTGGATTGCCCAAGATGCAAGTCTAACAACACCAAATTTTGTTATTACAACAATTACAGCCTCAATCAACCAAGATACTTTTGCAAATCTTGTAGAAGGTATTGGACTGAAGGAGGGTCCCTCAGAAATGTCCCCATTGGAGGAGCTTCAAGAAAGAACAGATCAAAGTCATCATCAACAACAACAATTACAACAACAAGTACTTCTTCTTCATCTGATTATTTCTGCAGTAACAATAACAAGAACCAAAAATTACCAAATTACCCTTCTTCATCTCAAATTTCTACTCAAATCCCAGTTGGATTAAGAGATCTTAATCTTGCTGATCATGATCACCTCCCTAAGGTTGAAAATGTCAATTATAATAATTTTGCATTTGGTTTTAGGGGTTTGAGTTCTTTTATCCCTAATCTAATGCCAAATTCCAATCATATTAATAATAATGGTAATTTGGGGATTAATAGTAATAGCCAATATCCATCAAGTGGGTTTTCTTTGGGTGATCACGTTGATGAGTTTAAGCCAAGTTTTGGAATCAATTCTGTTGATGGAAGAAACTTATTGCAGCTTCCTTTTCAAGAATTGAACCAACAATCTGCTGCCCCAAATGAAGGTGATCATCAAAATTGGAGTGAGATGCTTGGGGGTGGATCATTGGTGTTTGATGGAGGTCAAAAGGAGCCAAATTAG

Protein sequence

KNPNYPCKLEMKVAKATTTKAPKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSLRNVPIGGASRKNRSKSSSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQISTQIPVGLRDLNLADHDHLPKVENVNYNNFAFGFRGLSSFIPNLMPNSNHINNNGNLGINSNSQYPSSGFSLGDHVDEFKPSFGINSVDGRNLLQLPFQELNQQSAAPNEGDHQNWSEMLGGGSLVFDGGQKEPN*
Homology
[Close]
BLAST of Cucsa.349890 vs. Swiss-Prot
Match: DOF37_ARATH (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7 PE=1 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 1.7e-33
Identity = 99/256 (38.67%), Postives = 135/256 (52.73%), Query Frame = 1 

Query: 14  AKATTTKA-PKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSLRNVPIG 73
           A   T KA P+E+++CPRC S NTKFCYYNNYSL QPRYFCK CRRYWTEGGSLRNVP+G
Sbjct: 61  ATMETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVG 120

Query: 74  GASRKNRSKSSSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQISTQIP-VGLRDLN 133
           G+SRKN+  S        T  +S S         N KLP+       S+QIP    +DLN
Sbjct: 121 GSSRKNKRSS--------TPLASPS---------NPKLPDLNPPILFSSQIPNKSNKDLN 180

Query: 134 L------ADHDHLPKVENVNYNNFAFGFRGLSSFIPNLMPNSNHINNNGNLGINSNSQYP 193
           L       DH H   +E +  N  +   RG+++F+P  M +SN +  + +LG  +   Y 
Sbjct: 181 LLSFPVMQDHHH-HALELLRSNGVS--SRGMNTFLPGQMMDSNSVLYS-SLGFPTMPDYK 240

Query: 194 SSGFSLGDHVDEFKPSFGINSV-------------DGRNLLQLPFQELNQQSAAPNEGDH 244
            S  +L   +D  +   G N++             +G + +  PF ++ + S+   E  H
Sbjct: 241 QSNNNLSFSIDHHQ-GIGHNTINSNQRAQDNNDDMNGASRVLFPFSDMKELSSTTQEKSH 294

[Close]
BLAST of Cucsa.349890 vs. Swiss-Prot
Match: DOF25_ARATH (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5 PE=2 SV=3)

HSP 1 Score: 131.0 bits (328), Expect = 1.9e-29
Identity = 79/171 (46.20%), Postives = 103/171 (60.23%), Query Frame = 1 

Query: 22  PKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSLRNVPIGGASRKN-RS 81
           P+E+L+CPRC S NTKFCYYNNYSL QPRYFCK CRRYWTEGGSLRNVP+GG+SRKN RS
Sbjct: 76  PQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRS 135

Query: 82  KSSSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQISTQIPVGLRDLNLADHDHLPK 141
            SSS++ I  T  SS  D            P    S+QI  +     +DLNL      P 
Sbjct: 136 SSSSSSNILQTIPSSLPDL----------NPPILFSNQIHNKSKGSSQDLNLLS---FPV 195

Query: 142 VENVNYNNFAFGFRGLSSFIPNLMPNSNHINNNGNLGINSNSQYPSSGFSL 192
           +++ ++++       +S F+   MP    +  NGN+   ++ Q PSS  S+
Sbjct: 196 MQDQHHHHV-----HMSQFLQ--MPK---MEGNGNI---THQQQPSSSSSV 220

[Close]
BLAST of Cucsa.349890 vs. Swiss-Prot
Match: DOF18_ARATH (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-28
Identity = 98/268 (36.57%), Postives = 137/268 (51.12%), Query Frame = 1 

Query: 24  EQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSLRNVPIGGASRKN-RSKS 83
           + L+CPRC S NTKFCYYNNYSL QPRYFCK CRRYWT GGSLRN+P+GG  RKN RS S
Sbjct: 47  QALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSS 106

Query: 84  SSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQISTQIPVGLRDLNLAD---HDHLP 143
           +S+++  ++S+SS    F +NN     LP+   + +I       ++DL  +    + H  
Sbjct: 107 NSSSSSPSSSSSSKKPLFANNNTPTPPLPHL--NPKIGEAAATKVQDLTFSQGFGNAHEV 166

Query: 144 KVENVNYN-NFAFGFRGLSSFIP---NLMPNSNHINNN--------GNLGINSNSQ---- 203
           K  N+ ++  F  G    SS IP    ++P+S+  NN           LGI+S+S     
Sbjct: 167 KDLNLAFSQGFGIGHNHHSS-IPEFLQVVPSSSMKNNPLVSTSSSLELLGISSSSASSNS 226

Query: 204 ---------------YPSSGFSLG-DHVDEF-KPSFGINSVDGRNLLQ------------ 238
                          Y +SGF L      EF +P+ G  S+DG + L+            
Sbjct: 227 RPAFMSYPNVHDSSVYTASGFGLSYPQFQEFMRPALGF-SLDGGDPLRQEEGSSGTNNGR 286

[Close]
BLAST of Cucsa.349890 vs. Swiss-Prot
Match: DOF31_ARATH (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.8e-27
Identity = 61/104 (58.65%), Postives = 76/104 (73.08%), Query Frame = 1 

Query: 21  APKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSLRNVPIGGASRKNRS 80
           A +EQL CPRC S NTKFCYYNNY+L+QPR+FCKSCRRYWT+GG+LRNVP+GG SRKN +
Sbjct: 24  AEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNAT 83

Query: 81  KSSSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQISTQIP 125
           K S      T+S+SS+S    S+ NK  K P+ P     ++Q P
Sbjct: 84  KRS------TSSSSSASSPSNSSQNKKTKNPD-PDPDPRNSQKP 120

[Close]
BLAST of Cucsa.349890 vs. Swiss-Prot
Match: DOF46_ARATH (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.8e-27
Identity = 69/173 (39.88%), Postives = 95/173 (54.91%), Query Frame = 1 

Query: 24  EQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSLRNVPIGGASRKNRSKSS 83
           + ++CPRC S NTKFCYYNNYSL QPRYFCK CRRYWTEGGSLRN+P+GG SRKN+   S
Sbjct: 51  QAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKRSHS 110

Query: 84  STTTITTTSTSS----SSDYFCSNNNKNQKLPNYPSSSQISTQIPVGLRDLNLADHDHLP 143
           S++ I+   + S    +  +   +++    +     + Q    +    +DLNL    H  
Sbjct: 111 SSSDISNNHSDSTQPATKKHLSDHHHHLMSMSQQGLTGQNPKFLETTQQDLNLGFSPH-- 170

Query: 144 KVENVNYNNFAFGFRGLSSFIPNLMPNSNHINNNGN-LGINSNSQYPSSGFSL 192
               +   NF       +  I N+  N+N  NNN N L ++S S   +S   L
Sbjct: 171 ---GMIRTNF-------TDLIHNIGNNTNKSNNNNNPLIVSSCSAMATSSLDL 211

[Close]
BLAST of Cucsa.349890 vs. TrEMBL
Match: A0A0A0KAL6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G103520 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 8.9e-143
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1 

Query: 1   KNPNYPCKLEMKVAKATTTKAPKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYW 60
           KNPNYPCKLEMKVAKATTTKAPKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYW
Sbjct: 4   KNPNYPCKLEMKVAKATTTKAPKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYW 63

Query: 61  TEGGSLRNVPIGGASRKNRSKSSSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQIS 120
           TEGGSLRNVPIGGASRKNRSKSSSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQIS
Sbjct: 64  TEGGSLRNVPIGGASRKNRSKSSSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQIS 123

Query: 121 TQIPVGLRDLNLADHDHLPKVENVNYNNFAFGFRGLSSFIPNLMPNSNHINNNGNLGINS 180
           TQIPVGLRDLNLADHDHLPKVENVNYNNFAFGFRGLSSFIPNLMPNSNHINNNGNLGINS
Sbjct: 124 TQIPVGLRDLNLADHDHLPKVENVNYNNFAFGFRGLSSFIPNLMPNSNHINNNGNLGINS 183

Query: 181 NSQYPSSGFSLGDHVDEFKPSFGINSVDGRNLLQLPFQELNQQSAAPNEGDHQNWSEMLG 240
           NSQYPSSGFSLGDHVDEFKPSFGINSVDGRNLLQLPFQELNQQSAAPNEGDHQNWSEMLG
Sbjct: 184 NSQYPSSGFSLGDHVDEFKPSFGINSVDGRNLLQLPFQELNQQSAAPNEGDHQNWSEMLG 243

Query: 241 GGSL 245
           GGSL
Sbjct: 244 GGSL 247

[Close]
BLAST of Cucsa.349890 vs. TrEMBL
Match: E5GCN0_CUCME (F-box family protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 5.8e-126
Identity = 228/248 (91.94%), Postives = 236/248 (95.16%), Query Frame = 1 

Query: 1   KNPNYPCKLEMKVAKATTTKAPKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYW 60
           KNPNYPCKLEMK+ KATTTKAPKEQL+CPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYW
Sbjct: 4   KNPNYPCKLEMKMTKATTTKAPKEQLNCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYW 63

Query: 61  TEGGSLRNVPIGGASRKNRSKSSSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQIS 120
           TEGGSLRNVPIGGASRKNRSK+SS+   TTTSTSSSSDYFCSNNNKN+KLPNYPSSSQIS
Sbjct: 64  TEGGSLRNVPIGGASRKNRSKASSS---TTTSTSSSSDYFCSNNNKNKKLPNYPSSSQIS 123

Query: 121 TQIPVGLRDLNLADHDHLPKVENV-NYNNFAFGFRGLSSFIPNLMPNSNHINNNGNLGIN 180
           TQIPVGLRDLNLADHDHLPKVENV NYNNFAFGFRGLSSFIPNLMP+SN+INNNGNLGIN
Sbjct: 124 TQIPVGLRDLNLADHDHLPKVENVNNYNNFAFGFRGLSSFIPNLMPDSNNINNNGNLGIN 183

Query: 181 SN--SQYPSSGFSLGDHVDEFKPSFGINSVDGRNLLQLPFQELNQQSAAPNEG-DHQNWS 240
           S+  SQY SSGFSLGDHVDEFKPSFGINSVD RNLL LPFQELNQQSAAPNEG DHQNWS
Sbjct: 184 SSHYSQYSSSGFSLGDHVDEFKPSFGINSVDRRNLL-LPFQELNQQSAAPNEGDDHQNWS 243

Query: 241 EMLGGGSL 245
            MLGGGSL
Sbjct: 244 GMLGGGSL 247

[Close]
BLAST of Cucsa.349890 vs. TrEMBL
Match: U5FT89_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s09640g PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.7e-37
Identity = 105/235 (44.68%), Postives = 129/235 (54.89%), Query Frame = 1 

Query: 22  PKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSLRNVPIGGASRKNRSK 81
           P+EQL+CPRC S NTKFCYYNNYSL QPRYFCK+CRRYWTEGGSLRNVP+GG SRKN+  
Sbjct: 20  PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRS 79

Query: 82  SSSTTTITTTSTSSSSDYFCSNNNKNQKLP--NYPSSSQISTQIPVGL---RDLNLADHD 141
           +SS     + +TSSS            KLP  N PS S  S+Q P      +DLNLA   
Sbjct: 80  TSS-----SVATSSS------------KLPDLNPPSLSHFSSQNPKSTHEGQDLNLA-FP 139

Query: 142 HLPKVENVNYNNFAFGFRGLSSFIPNLMPNSNHINNNGNLGINSNSQYPSSGFSLGDHVD 201
            +   + +      F  RGL++FIP  MP+SN + ++G  G       P+  F      D
Sbjct: 140 AMQDSQAMELLRSGFASRGLNTFIPTPMPDSNTLYSSG--GFPLQELRPTLSFP----AD 199

Query: 202 EFKPSFGINSVDGRNLLQLPFQELNQQSAAPNEGDHQN--------WSEMLGGGS 244
                +GI    GR  L  PF EL Q S+  +E D           W+ M GGGS
Sbjct: 200 GLGSRYGIQENSGR--LLFPFGELKQLSSTTSEVDQNKGQGGSSGYWNGMFGGGS 228

[Close]
BLAST of Cucsa.349890 vs. TrEMBL
Match: B9GR41_POPTR (DOF AFFECTING GERMINATION 2 family protein OS=Populus trichocarpa GN=POPTR_0002s17490g PE=4 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 1.9e-36
Identity = 102/236 (43.22%), Postives = 128/236 (54.24%), Query Frame = 1 

Query: 22  PKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSLRNVPIGGASRKNRSK 81
           P+EQL+CPRC S NTKFCYYNNYSL QPRYFCK+CRRYWTEGGSLRNVP+GG SRKN+  
Sbjct: 20  PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRS 79

Query: 82  SSSTTTITTTSTSSSSDYFCSNNNKNQKLP--NYPSSSQISTQIPVGL---RDLNLADHD 141
           +SS+   +   +               KLP  N P+ S  S+Q P      +DLNLA   
Sbjct: 80  TSSSVAASAAPS---------------KLPDLNPPNLSHFSSQNPKSAHEGQDLNLA-FP 139

Query: 142 HLPKVENVNYNNFAFGFRGLSSFIPNLMPNSNHINNNGNLGINSNSQYPSSGFSLGDHVD 201
            +   + +         RGL+SFIP  MP+SN + ++G  G       P+  FSL    D
Sbjct: 140 AMQDSQALELLRSGIASRGLNSFIPTPMPDSNTLYSSG--GFPLQELKPTLSFSL----D 199

Query: 202 EFKPSFGINSVDGRNLLQLPFQELNQQSAAPNEGDHQN---------WSEMLGGGS 244
                +G+   +GR  L  PF EL Q S+  NE D            W+ M GGGS
Sbjct: 200 GLGSRYGVQEHNGR--LLFPFGELKQLSST-NEVDQNKGQGTSSTGYWNGMFGGGS 230

[Close]
BLAST of Cucsa.349890 vs. TrEMBL
Match: B9I901_POPTR (DOF AFFECTING GERMINATION 2 family protein OS=Populus trichocarpa GN=POPTR_0014s09640g PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.6e-35
Identity = 101/249 (40.56%), Postives = 129/249 (51.81%), Query Frame = 1 

Query: 22  PKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSLRNVPIGGASRKNRSK 81
           P+EQL+CPRC S NTKFCYYNNYSL QPRYFCK+CRRYWTEGGSLRNVP+GG SRKN+  
Sbjct: 20  PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRS 79

Query: 82  SSSTTTITTTSTSS----SSDYFCSNNNK--------NQKLPNYPSSSQIS--TQIP-VG 141
           +SS+   +++        S  +F S N K        N   P    S  IS  T++P   
Sbjct: 80  TSSSVATSSSKLPDLNPPSLSHFSSQNPKSTHEGQDLNLAFPAMQDSQGISHYTEVPKTE 139

Query: 142 LRDLNLADHDHLP----KVENVNYNNFAFGFRGLSSFIPNLMPNSNHINNNGNLGINSNS 201
            R+ N  +    P     +  +      F  RGL++FIP  MP+SN + ++G  G     
Sbjct: 140 NRNNNQHNSSSSPYTSSPISAMELLRSGFASRGLNTFIPTPMPDSNTLYSSG--GFPLQE 199

Query: 202 QYPSSGFSLGDHVDEFKPSFGINSVDGRNLLQLPFQELNQQSAAPNEGDHQN-------- 244
             P+  F      D     +GI    GR  L  PF EL Q S+  +E D           
Sbjct: 200 LRPTLSFP----ADGLGSRYGIQENSGR--LLFPFGELKQLSSTTSEVDQNKGQGGSSGY 259

[Close]
BLAST of Cucsa.349890 vs. TAIR10
Match: AT3G61850.4 (AT3G61850.4 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 146.0 bits (367), Expect = 3.2e-35
Identity = 102/281 (36.30%), Postives = 140/281 (49.82%), Query Frame = 1 

Query: 14  AKATTTKA-PKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSLRNVPIG 73
           A   T KA P+E+++CPRC S NTKFCYYNNYSL QPRYFCK CRRYWTEGGSLRNVP+G
Sbjct: 61  ATMETRKARPQEKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVG 120

Query: 74  GASRKNRSKSSSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQISTQIP-VGLRDLN 133
           G+SRKN+  S        T  +S S         N KLP+       S+QIP    +DLN
Sbjct: 121 GSSRKNKRSS--------TPLASPS---------NPKLPDLNPPILFSSQIPNKSNKDLN 180

Query: 134 L------ADHD--------HLPKVENVNYNNFAF-----------------GFRGLSSFI 193
           L       DH         H+PK+EN N ++  +                   RG+++F+
Sbjct: 181 LLSFPVMQDHHHHGMSHFFHMPKIENNNTSSSIYASSSPVSALELLRSNGVSSRGMNTFL 240

Query: 194 PNLMPNSNHINNNGNLGINSNSQYPSSGFSLGDHVDEFKPSFGINSV------------- 244
           P  M +SN +  + +LG  +   Y  S  +L   +D  +   G N++             
Sbjct: 241 PGQMMDSNSVLYS-SLGFPTMPDYKQSNNNLSFSIDHHQ-GIGHNTINSNQRAQDNNDDM 300

[Close]
BLAST of Cucsa.349890 vs. TAIR10
Match: AT2G46590.2 (AT2G46590.2 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30
Identity = 79/171 (46.20%), Postives = 103/171 (60.23%), Query Frame = 1 

Query: 22  PKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSLRNVPIGGASRKN-RS 81
           P+E+L+CPRC S NTKFCYYNNYSL QPRYFCK CRRYWTEGGSLRNVP+GG+SRKN RS
Sbjct: 76  PQEKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRS 135

Query: 82  KSSSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQISTQIPVGLRDLNLADHDHLPK 141
            SSS++ I  T  SS  D            P    S+QI  +     +DLNL      P 
Sbjct: 136 SSSSSSNILQTIPSSLPDL----------NPPILFSNQIHNKSKGSSQDLNLLS---FPV 195

Query: 142 VENVNYNNFAFGFRGLSSFIPNLMPNSNHINNNGNLGINSNSQYPSSGFSL 192
           +++ ++++       +S F+   MP    +  NGN+   ++ Q PSS  S+
Sbjct: 196 MQDQHHHHV-----HMSQFLQ--MPK---MEGNGNI---THQQQPSSSSSV 220

[Close]
BLAST of Cucsa.349890 vs. TAIR10
Match: AT1G64620.1 (AT1G64620.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 128.3 bits (321), Expect = 7.0e-30
Identity = 98/268 (36.57%), Postives = 137/268 (51.12%), Query Frame = 1 

Query: 24  EQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSLRNVPIGGASRKN-RSKS 83
           + L+CPRC S NTKFCYYNNYSL QPRYFCK CRRYWT GGSLRN+P+GG  RKN RS S
Sbjct: 47  QALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSS 106

Query: 84  SSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQISTQIPVGLRDLNLAD---HDHLP 143
           +S+++  ++S+SS    F +NN     LP+   + +I       ++DL  +    + H  
Sbjct: 107 NSSSSSPSSSSSSKKPLFANNNTPTPPLPHL--NPKIGEAAATKVQDLTFSQGFGNAHEV 166

Query: 144 KVENVNYN-NFAFGFRGLSSFIP---NLMPNSNHINNN--------GNLGINSNSQ---- 203
           K  N+ ++  F  G    SS IP    ++P+S+  NN           LGI+S+S     
Sbjct: 167 KDLNLAFSQGFGIGHNHHSS-IPEFLQVVPSSSMKNNPLVSTSSSLELLGISSSSASSNS 226

Query: 204 ---------------YPSSGFSLG-DHVDEF-KPSFGINSVDGRNLLQ------------ 238
                          Y +SGF L      EF +P+ G  S+DG + L+            
Sbjct: 227 RPAFMSYPNVHDSSVYTASGFGLSYPQFQEFMRPALGF-SLDGGDPLRQEEGSSGTNNGR 286

[Close]
BLAST of Cucsa.349890 vs. TAIR10
Match: AT3G21270.1 (AT3G21270.1 DOF zinc finger protein 2)

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-28
Identity = 61/104 (58.65%), Postives = 76/104 (73.08%), Query Frame = 1 

Query: 21  APKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSLRNVPIGGASRKNRS 80
           A +EQL CPRC S NTKFCYYNNY+L+QPR+FCKSCRRYWT+GG+LRNVP+GG SRKN +
Sbjct: 24  AEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNAT 83

Query: 81  KSSSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQISTQIP 125
           K S      T+S+SS+S    S+ NK  K P+ P     ++Q P
Sbjct: 84  KRS------TSSSSSASSPSNSSQNKKTKNPD-PDPDPRNSQKP 120

[Close]
BLAST of Cucsa.349890 vs. TAIR10
Match: AT4G24060.1 (AT4G24060.1 Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-28
Identity = 69/173 (39.88%), Postives = 95/173 (54.91%), Query Frame = 1 

Query: 24  EQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSLRNVPIGGASRKNRSKSS 83
           + ++CPRC S NTKFCYYNNYSL QPRYFCK CRRYWTEGGSLRN+P+GG SRKN+   S
Sbjct: 51  QAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKRSHS 110

Query: 84  STTTITTTSTSS----SSDYFCSNNNKNQKLPNYPSSSQISTQIPVGLRDLNLADHDHLP 143
           S++ I+   + S    +  +   +++    +     + Q    +    +DLNL    H  
Sbjct: 111 SSSDISNNHSDSTQPATKKHLSDHHHHLMSMSQQGLTGQNPKFLETTQQDLNLGFSPH-- 170

Query: 144 KVENVNYNNFAFGFRGLSSFIPNLMPNSNHINNNGN-LGINSNSQYPSSGFSL 192
               +   NF       +  I N+  N+N  NNN N L ++S S   +S   L
Sbjct: 171 ---GMIRTNF-------TDLIHNIGNNTNKSNNNNNPLIVSSCSAMATSSLDL 211

[Close]
BLAST of Cucsa.349890 vs. NCBI nr
Match: gi|449445517|ref|XP_004140519.1| (PREDICTED: dof zinc finger protein DOF3.7-like [Cucumis sativus])

HSP 1 Score: 514.2 bits (1323), Expect = 1.3e-142
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 1 

Query: 1   KNPNYPCKLEMKVAKATTTKAPKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYW 60
           KNPNYPCKLEMKVAKATTTKAPKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYW
Sbjct: 4   KNPNYPCKLEMKVAKATTTKAPKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYW 63

Query: 61  TEGGSLRNVPIGGASRKNRSKSSSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQIS 120
           TEGGSLRNVPIGGASRKNRSKSSSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQIS
Sbjct: 64  TEGGSLRNVPIGGASRKNRSKSSSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQIS 123

Query: 121 TQIPVGLRDLNLADHDHLPKVENVNYNNFAFGFRGLSSFIPNLMPNSNHINNNGNLGINS 180
           TQIPVGLRDLNLADHDHLPKVENVNYNNFAFGFRGLSSFIPNLMPNSNHINNNGNLGINS
Sbjct: 124 TQIPVGLRDLNLADHDHLPKVENVNYNNFAFGFRGLSSFIPNLMPNSNHINNNGNLGINS 183

Query: 181 NSQYPSSGFSLGDHVDEFKPSFGINSVDGRNLLQLPFQELNQQSAAPNEGDHQNWSEMLG 240
           NSQYPSSGFSLGDHVDEFKPSFGINSVDGRNLLQLPFQELNQQSAAPNEGDHQNWSEMLG
Sbjct: 184 NSQYPSSGFSLGDHVDEFKPSFGINSVDGRNLLQLPFQELNQQSAAPNEGDHQNWSEMLG 243

Query: 241 GGSL 245
           GGSL
Sbjct: 244 GGSL 247

[Close]
BLAST of Cucsa.349890 vs. NCBI nr
Match: gi|659119642|ref|XP_008459765.1| (PREDICTED: dof zinc finger protein DOF3.7 [Cucumis melo])

HSP 1 Score: 458.4 bits (1178), Expect = 8.3e-126
Identity = 228/248 (91.94%), Postives = 236/248 (95.16%), Query Frame = 1 

Query: 1   KNPNYPCKLEMKVAKATTTKAPKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYW 60
           KNPNYPCKLEMK+ KATTTKAPKEQL+CPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYW
Sbjct: 4   KNPNYPCKLEMKMTKATTTKAPKEQLNCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYW 63

Query: 61  TEGGSLRNVPIGGASRKNRSKSSSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQIS 120
           TEGGSLRNVPIGGASRKNRSK+SS+   TTTSTSSSSDYFCSNNNKN+KLPNYPSSSQIS
Sbjct: 64  TEGGSLRNVPIGGASRKNRSKASSS---TTTSTSSSSDYFCSNNNKNKKLPNYPSSSQIS 123

Query: 121 TQIPVGLRDLNLADHDHLPKVENV-NYNNFAFGFRGLSSFIPNLMPNSNHINNNGNLGIN 180
           TQIPVGLRDLNLADHDHLPKVENV NYNNFAFGFRGLSSFIPNLMP+SN+INNNGNLGIN
Sbjct: 124 TQIPVGLRDLNLADHDHLPKVENVNNYNNFAFGFRGLSSFIPNLMPDSNNINNNGNLGIN 183

Query: 181 SN--SQYPSSGFSLGDHVDEFKPSFGINSVDGRNLLQLPFQELNQQSAAPNEG-DHQNWS 240
           S+  SQY SSGFSLGDHVDEFKPSFGINSVD RNLL LPFQELNQQSAAPNEG DHQNWS
Sbjct: 184 SSHYSQYSSSGFSLGDHVDEFKPSFGINSVDRRNLL-LPFQELNQQSAAPNEGDDHQNWS 243

Query: 241 EMLGGGSL 245
            MLGGGSL
Sbjct: 244 GMLGGGSL 247

[Close]
BLAST of Cucsa.349890 vs. NCBI nr
Match: gi|566203431|ref|XP_006375374.1| (hypothetical protein POPTR_0014s09640g [Populus trichocarpa])

HSP 1 Score: 164.5 bits (415), Expect = 2.5e-37
Identity = 105/235 (44.68%), Postives = 129/235 (54.89%), Query Frame = 1 

Query: 22  PKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSLRNVPIGGASRKNRSK 81
           P+EQL+CPRC S NTKFCYYNNYSL QPRYFCK+CRRYWTEGGSLRNVP+GG SRKN+  
Sbjct: 20  PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRS 79

Query: 82  SSSTTTITTTSTSSSSDYFCSNNNKNQKLP--NYPSSSQISTQIPVGL---RDLNLADHD 141
           +SS     + +TSSS            KLP  N PS S  S+Q P      +DLNLA   
Sbjct: 80  TSS-----SVATSSS------------KLPDLNPPSLSHFSSQNPKSTHEGQDLNLA-FP 139

Query: 142 HLPKVENVNYNNFAFGFRGLSSFIPNLMPNSNHINNNGNLGINSNSQYPSSGFSLGDHVD 201
            +   + +      F  RGL++FIP  MP+SN + ++G  G       P+  F      D
Sbjct: 140 AMQDSQAMELLRSGFASRGLNTFIPTPMPDSNTLYSSG--GFPLQELRPTLSFP----AD 199

Query: 202 EFKPSFGINSVDGRNLLQLPFQELNQQSAAPNEGDHQN--------WSEMLGGGS 244
                +GI    GR  L  PF EL Q S+  +E D           W+ M GGGS
Sbjct: 200 GLGSRYGIQENSGR--LLFPFGELKQLSSTTSEVDQNKGQGGSSGYWNGMFGGGS 228

[Close]
BLAST of Cucsa.349890 vs. NCBI nr
Match: gi|802694403|ref|XP_012083165.1| (PREDICTED: dof zinc finger protein DOF3.7 isoform X4 [Jatropha curcas])

HSP 1 Score: 164.1 bits (414), Expect = 3.2e-37
Identity = 104/251 (41.43%), Postives = 130/251 (51.79%), Query Frame = 1 

Query: 22  PKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSLRNVPIGGASRKNRSK 81
           P+EQL+CPRC S NTKFCYYNNYSL QPRYFCK+CRRYWTEGGSLRNVP+GG SRKN+  
Sbjct: 40  PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRS 99

Query: 82  SSSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQISTQIPVGLRDLNLADHDHLPKV 141
           +SS    ++ S+S   D             N PS SQ + +   G +DLNLA     P +
Sbjct: 100 TSSAAASSSASSSKLPDL------------NPPSMSQFANKNNEG-QDLNLA----FPAI 159

Query: 142 ENVNYN-----NFAFGFRGLSSFIPNLMPNSNHINNNGNLGINSNSQYPSSGFSLGDHVD 201
           +  ++            RGL+SF+P  M +SN +             Y SSGF     V 
Sbjct: 160 QESHHQALELLRTGIASRGLNSFLPTPMADSNAL-------------YSSSGFP----VQ 219

Query: 202 EFKPS------------FGINSVDGRNLLQLPFQELNQQSAAPNEGDHQN---------- 243
           EFKP+            FG+N  +    +  PF EL Q S+   E DHQN          
Sbjct: 220 EFKPTLSFSVEGLGSSRFGVNQENAGGRILFPFGELKQISST-TEVDHQNKGQENSSSSN 255

[Close]
BLAST of Cucsa.349890 vs. NCBI nr
Match: gi|802694407|ref|XP_012083166.1| (PREDICTED: dof zinc finger protein DOF3.7 isoform X5 [Jatropha curcas])

HSP 1 Score: 164.1 bits (414), Expect = 3.2e-37
Identity = 104/251 (41.43%), Postives = 130/251 (51.79%), Query Frame = 1 

Query: 22  PKEQLDCPRCKSNNTKFCYYNNYSLNQPRYFCKSCRRYWTEGGSLRNVPIGGASRKNRSK 81
           P+EQL+CPRC S NTKFCYYNNYSL QPRYFCK+CRRYWTEGGSLRNVP+GG SRKN+  
Sbjct: 37  PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRS 96

Query: 82  SSSTTTITTTSTSSSSDYFCSNNNKNQKLPNYPSSSQISTQIPVGLRDLNLADHDHLPKV 141
           +SS    ++ S+S   D             N PS SQ + +   G +DLNLA     P +
Sbjct: 97  TSSAAASSSASSSKLPDL------------NPPSMSQFANKNNEG-QDLNLA----FPAI 156

Query: 142 ENVNYN-----NFAFGFRGLSSFIPNLMPNSNHINNNGNLGINSNSQYPSSGFSLGDHVD 201
           +  ++            RGL+SF+P  M +SN +             Y SSGF     V 
Sbjct: 157 QESHHQALELLRTGIASRGLNSFLPTPMADSNAL-------------YSSSGFP----VQ 216

Query: 202 EFKPS------------FGINSVDGRNLLQLPFQELNQQSAAPNEGDHQN---------- 243
           EFKP+            FG+N  +    +  PF EL Q S+   E DHQN          
Sbjct: 217 EFKPTLSFSVEGLGSSRFGVNQENAGGRILFPFGELKQISST-TEVDHQNKGQENSSSSN 252

The following BLAST results are available for this feature:
BLAST of Cucsa.349890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DOF37_ARATH1.7e-3338.67Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7 PE=1 SV=2[more]
DOF25_ARATH1.9e-2946.20Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5 PE=2 SV=3[more]
DOF18_ARATH1.2e-2836.57Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8 PE=2 SV=1[more]
DOF31_ARATH1.8e-2758.65Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1 PE=2 SV=2[more]
DOF46_ARATH1.8e-2739.88Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6 PE=2 SV=2[more]
BLAST of Cucsa.349890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAL6_CUCSA8.9e-143100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G103520 PE=4 SV=1[more]
E5GCN0_CUCME5.8e-12691.94F-box family protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
U5FT89_POPTR1.7e-3744.68Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s09640g PE=4 SV=1[more]
B9GR41_POPTR1.9e-3643.22DOF AFFECTING GERMINATION 2 family protein OS=Populus trichocarpa GN=POPTR_0002s... [more]
B9I901_POPTR1.6e-3540.56DOF AFFECTING GERMINATION 2 family protein OS=Populus trichocarpa GN=POPTR_0014s... [more]
BLAST of Cucsa.349890 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G61850.43.2e-3536.30 Dof-type zinc finger DNA-binding family protein[more]
AT2G46590.21.1e-3046.20 Dof-type zinc finger DNA-binding family protein[more]
AT1G64620.17.0e-3036.57 Dof-type zinc finger DNA-binding family protein[more]
AT3G21270.11.0e-2858.65 DOF zinc finger protein 2[more]
AT4G24060.11.0e-2839.88 Dof-type zinc finger DNA-binding family protein[more]
BLAST of Cucsa.349890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445517|ref|XP_004140519.1|1.3e-142100.00PREDICTED: dof zinc finger protein DOF3.7-like [Cucumis sativus][more]
gi|659119642|ref|XP_008459765.1|8.3e-12691.94PREDICTED: dof zinc finger protein DOF3.7 [Cucumis melo][more]
gi|566203431|ref|XP_006375374.1|2.5e-3744.68hypothetical protein POPTR_0014s09640g [Populus trichocarpa][more]
gi|802694403|ref|XP_012083165.1|3.2e-3741.43PREDICTED: dof zinc finger protein DOF3.7 isoform X4 [Jatropha curcas][more]
gi|802694407|ref|XP_012083166.1|3.2e-3741.43PREDICTED: dof zinc finger protein DOF3.7 isoform X5 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.349890.1Cucsa.349890.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePRODOMPD007478coord: 22..79
score: 3.0
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 24..80
score: 2.1
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 28..64
scor
IPR003851Zinc finger, Dof-typePROFILEPS50884ZF_DOF_2coord: 26..80
score:
NoneNo IPR availablePANTHERPTHR31992FAMILY NOT NAMEDcoord: 21..246
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.349890Csa6G103520Cucumber (Chinese Long) v2cgycuB490
Cucsa.349890CSPI06G08140Wild cucumber (PI 183967)cgycpiB517
Cucsa.349890CmaCh08G001380Cucurbita maxima (Rimu)cgycmaB0954
Cucsa.349890CmoCh08G001390Cucurbita moschata (Rifu)cgycmoB0954
Cucsa.349890Cp4.1LG17g10460Cucurbita pepo (Zucchini)cgycpeB0910
Cucsa.349890CsaV3_6G008520Cucumber (Chinese Long) v3cgycucB532
Cucsa.349890Carg04965Silver-seed gourdcarcgyB0097
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.349890Watermelon (97103) v2cgywmbB596
Cucsa.349890Watermelon (Charleston Gray)cgywcgB595
Cucsa.349890Watermelon (97103) v1cgywmB627
Cucsa.349890Bottle gourd (USVL1VR-Ls)cgylsiB562
Cucsa.349890Melon (DHL92) v3.6.1cgymedB565