Cucsa.348620 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.348620
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionTrafficking protein particle complex subunit 5
Locationscaffold03487 : 69651 .. 75435 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAAATAAGGTTTGGGTCCAAAATCAATTAAGGGAAAGAAAAGAGAAGAAAAGGAAAGGAAAGGAAAAGGAAGACGAGGCCTTCTTCACGTTCACCTGACCCCTACGGTTTCAACTGCCATCTTATCCGGCGACGGCGACCGTCTACGTGCAGCGGCCTGACACCAGATCTGTGGGTGGAATACACCTGCTGTAATCGACGAACGAAGAACAGTACGCCGGCAACGCCGCTCCTCAGTCGGCCATTTTTCTGTTTCGAGCTACACTAGTGAACTCTGGCGGACGTTTCGATTGGAGCGATTCATAGTTTAGAGATATTCATATATCGTAAGCTTCAGCAACGTCCTTTCAACTGATCGGTGGCCTTCAAACGACACTCCAGCACCCTGCCGCTCGCGCTCGACCTCTCCAAGAGAACCCGCGGCTTCCATTGGCGGAGACGCCTTCCGGTAGTGGTAATTCTCAACGCCAACGGCTCGATCGGCTCTGGATCTGATTACCCACTTCATTTTAGCGGCAAATCTGTGAGTTGGAAGGATTTTGGACACTGTTCAGCAAGATTAAAGGCTTTTGAACGAGTTTCGTAGGTATTGTTGATCTAAATAGCTTTTCAAACTCGATTTAAATTTTGATTGATTGGGGTGTAGATGCAGTTTTGGAGGAATGGATTGTTGGTTAACATTTCTGAGCGCTTTTTGGGTAATCTTACCCCGTTGATTGGACATCTTATGTATTGTTTTTAATTTTAGAATACGTTATTTAGGTTTTGGGTCAAGATTTTCTGTAAGGAAAAGGAAGATTAAGTTGTTTGGAGTTGCTTTGAGGTATCTGATTCTTCTATCAGATTGCCACACTGATAGGTTGGATAAAATGTATGATTTTTGAAGTTTCTGAATGTCGAAAACCGGATGATGCATGATGAATAATAAACGTAGAAAGTTCATGTTAATAGTTGAACGACGATATGACAATTGTGAAAGTTGTATGACAATTGTGAAAGTTGTTTCGTGTTGCATCCTACATGGTTTGTTGGCTCAGCCGTGCCATCGGGTTGGTTCAGTGTAAGCATATTTTTCGACTCCACATTATTACACACACGAGTTATTGAGTCTTATTTGTAAAAGTTGAGTTATGAGATCATTTAAACTGTTCTTATTTTAGTCTATGTTTAAACTGTTTTCAAGGAATTCTGATTCAAGTTTTTGATTATTTTACAGAAAATAGAAAATTATCCTCTCAAAGATTTTAAAATGACTTTAACATGCATGTAGTGATGTCCCTCGTTAGTTTTAGTTCAAAAAGTTAGTTGTTACAATTCAAATCCCATGTCTTTGGTTCTTACCAAACATTGAAAATGATTTCAAATTTGAGGCTTCTAAAGATTGCTAATTTTATGTTGACGATTTTCCTCCAGGGACTTCCAAGGGCCCTGCTCTTAGGAATTAGGGAATCATGATTGGAGTTGGGAAGATCAAGCAATATTCTAATGTCCTCGAAAAACCTCTCAGCAAGGGAAAACAGGAGGTTGTACTCTATCTATATATACTTATTCTTTTTCTTGTTAAAGAAAAATCAACTTCATACCTCACCTCGTTAGATCATTTTGTTTAAAGTAGAGCTTGTCAGCCCTCCTGGATTTTGTCGTTATGACTTATGATCCCTCAAATGATGTCACTATAATCCCTCAAATGATATAGTTTAACAAAGTTAAAACTTAAGATCTCACCATTTTTAGGCTTTTGACGATTTCAACTTGAGTATTATTTATTTATCTTTTAATAAAAGAAATTTTATATTAATGTCATAATCTGAAGTTGAATCCTTTGAGCTTGTCATATTATTTCTTTATTCCCTTTGTCAACAATATTTTAATTAGTTAAGTGAATTTTAGCTACAAATCTACAATATGTTTGTGATTAGGTTTAATTTGTTTATTTATAGGTGAGTTTGAGTGCATTTGCATTCTTGTTCTCCGAACTTGTGCAATACAATCAGACTCAAGTTGACAATATTGCTGAGTTAGAACGAAGGTAATCTTTTATCTGAAGCTATTATATTCTAATCGACAACCATTCATCGTTGTGGTTTTTGTTTTTGTTGGAGGGGGTCAAAAATTAACAGGAGACGTGATTAATATTTCATACATACATGAAGGCTAATGATCTAGATTTGAACTTTCTAATGTTCTTTGCATGTCATTTTTTTTATCCTTTTCCTTTTGATATATTTCTATTTTTATCAATAAATAGAGTTTGTATAAACAACTAAACAAAAAACAAACTCAAATTTTGTGGGGACAAGATTACCCTACACCTAAAGTTATAATCAACTAAAAGAACTCTAGTTCAAGCTTATGACAATGATAGGAACATTGCAAAATGATTTTGGAGCACTCTAACTTGAAGGTTTCCATTGTTTTTCGTTACGCTAATGAAAAGGATGGTTTTAAAGCTTTTTTCCCAGAATGGTCTAAAGACTGCATTTGAGCTAAATCCTAGCTTTGTCCTCATCAAATAGAGAATTTAATGAAGACATCTTCCATCTTCTTTGAAGAATACCAAGCTAACTGAAAAGGTTTTCTAGTAAAATTTCAACTATAAGGAACAAATGAAGAGGTGATTGGAGGATTCCTCTCACTAAAACACATAGGCTCGATTTAAGGAGGAAGATGAAAAGTTTCAGTGATGTTGTATACGCATGGTGCTTGGGAGGAGATTTCAATATTATGAGATGGGCTCATAAACTTCTCCCAAACTTAGGACTTACGGATGTTCCTCACTAGAATGCTTGTTTCACGTGGTCTTGAGGGGGGTGGGGGCATAGTAGAGGCTGACATTATTCATTGGGGTCCTTTTGTGTTTCAATTTGTAATAGTTGGTTTTGGCACAAGAATTGTAAAAACTGGCTTGAAGCTTCGATTTTTGGGTCTCAATTCCAAGCTTTGATATTCCACCAGTCAAGATTGGAAAACTTTTGTTGATGCCATTGCAAGGGGGGGTTTGTGAGTTGTGCTTATTGATTCTTTTTAGTGTTTTACCAAACAGTTCTGTAGCTTGATGGCTTAGAGAGGGTGGACTATAATTCAGTTTATTCCTCGGTCATAGGTTCAAAGCCTACTAGGTACAAAAGAAAGCAAATATATATATATATATCTTTTTAGTTTTCTGTTTGGATTTTAGTTCTCCTTTCAAGTTTCTTTTTCCAATTTTAATTTTTAGTTTGCTTATAATTCTCCCCAGATAGAGAATTCCCCTCACGTATCCCAACTTTTCATCCAATTCTCTCCTTTAGTCTATTGGACTACACTATTTAGGTTTGTTCTTGACTTCATTCGAAGTATTTAGGCAGTTAATGCTGCTGTTAAGAGAAAGAACTTTAGTCTTCTTTATAAGGATTAAGCTATATTTGCGTCCAGGAAGATATTCCAATGAGGATGAAGTTGAATTTCAAAACTTTTTAGTTATTTGACAAAATATTTTTTTCATACTCTCTCTTATACATTCACAAATTTATGTGTACAACTTATAATAAGAATGACAAAGATACAGTTTAGGGATAATAACATGAATTTTGTCCTTTCTTGTTAAGTTTTTTAAATGCACATTAGAACTGTTATCTCGAAGTTTGATGGCTTTGAGGTAAACTGAATCAGGTTGGAGGATGCGGGCTATGCAGTTGGTGCTCGAGTATTGGAACTTTTTTGTCACCGAGAGAAGGTATTGAATCTTATGTTAAAAGCTAATTGAGCCTTTCACTTTTTAAATTTGAACCACCACATTTTGGTTTTCCTGCTTATGTTTGTTTTATGTTCTCAGGATTTTATTTTTGGTTTAAAACACATTGATAGATACTCTAATCCTTGATTTTAGGATGGTAGATTTTCATTTGGATCCGTATTCGTTCTTTTGAATTTACTTTATCATTTAAGTTAATGTTCAGATCTGCTTTATGCTTCTTTGTTCTCACAGGGAAATAGACGGGAGACGCGATTATTAGGCATTCTCTCATTTGTACACAGCACAATTTGGAAGGTTTTGTTTGGAAAGGTGAATACTTGCATTTGATTGCACAATTCGCTTTTAAAGTGGTAGTTGTTATACTTGCATCGCCAAACTTTCCATAGTAAAAAATAAACCTTTAGGGCTGGGTAGCCTAGAGATTTTGATAACATTAATTGTATTCGGAGTCTTATTCTTCAAGGCTTTGAAATTGCTGACTTCCCCCTTGTTTAAATTGTAATTGATGTACTTAAAAACCTATTGGAAAACCATTTTAATATCCAACTCCTAAACCAATGCTAGTTTTTGTTTCTAAAACTTGGTCACGTTTTTTAAAATTGTTTTCCAAAGTAGACTAGAAAGTAAATGAAAATGCTCGTAAATACGCATAAAACCAGCAGAAAAAACGTAATCATACAAGCTTCCACTTTTTCAAAATAATTCCCTTAAATTGCATGGCAGAATGAGTACAAAACATCCACTAAGTTCTGCCTTCATGTTGTCAGGTTGCTGACTCACTTGAGAAAGGCACTGAACATGAAGATGAGTACATGATCAGTGAAAAGGAGCTGCTTGTGAATAGGTAGCTATTGTCTCGGTCGTCATGCTTTCAGTTTTATTTACTTATTTTTTTAATTATATTATTGTTATTGTTATTGTTTTTGCTTCACTCAATAACCTTATCATCTACCTTAGATTTATTTCAATTCCAAAAGACATGGGTGCGTTTAACTGCGGGGCTTTTGTTGCTGGCATTGTCAGAGTAAGTGCTGCAAGGCCTCTTTGAAATGGATGGTATTCTAGTTTATGTAAGTTCTGATGTGTTCCGTCTTGCTTAAAGGGTGTGCTGGACAATGCTGGGTTTCCCGCTGTTGTAACGGCACATTTTGTTCCGGTGGAGGGCCAACAGCGACCACGGACGACTATTTTGATTAAATTTGCAGAAGAGGTAAGTGTTACCCTCGTTGACCTTTCAACTCTACTCTCCTTTCCTGATTAATGCTTATTGAAGTTCTTTCTTAAGCACTTATTTGTGCCTAGTGGGTGGATATAAGGACGAACACTTGTCCGTATTGACATGTGTTTCTTTTATGATTAATACTTATTAGAGTTCTTTTTAAGTACTTATTTGGGCTGAGTGGGTGGATATAAGGATGAACACTTTTAGTTTACGGGTGTTGGACACTTGTTAGTACAATATGTATATGTTAAATATTTTTTATACAAAACGAATATGGTGACACTTTTTAGACACGTATTAACATAGCAAATAGATGTATAATCGTTTTCTGATGTCTCATTTTTAGGATTTCCTCTCAAATGATTCCATGCTCTCTTTTTTCTCTTGATCCCATTTCAGGTATTAGCAAGAGAAGCAAGATTAGGTTGATATATGGTTTGAAGTAAGGTTGGGTATTGTTCTTATGCTTTTAGCATTTTGATATTGGAGAACGGTGAATTTCTTTCTGGCCATTGAACACAGAATTTCACCTGATATCTCTCTGTTGTGAAGCTGTAAGGAAATTTGTGCTCTTCAATTAATCTGTATAATTGATGGCATCGATTACTTTGTTGCGAGCAAAATGAGCTGTGAAACTATAAATGGTTTATTCAGCATAAATGTAAACCGAAGCAAATTCAAAACCTCCCTCCCAATTGCTTTTTTCGTTTAATCTATCAGTACTTGGACTTATATTAACTTGTTGTGTCTAAGCTATAAGATTTAGATACAAATTAATTGTTTGAATTGTTTTTCCATTAAGAATCATTGGTACAAAGCCATTTTCT

mRNA sequence

TCAAATAAGGTTTGGGTCCAAAATCAATTaagggaaagaaaagagaagaaaaggaaaggaaaggaaaaggaagACGAGGCCTTCTTCACGTTCACCTGACCCCTACGGTTTCAACTGCCATCTTATCCGGCGACGGCGACCGTCTACGTGCAGCGGCCTGACACCAGATCTGTGGGTGGAATACACCTGCTGTAATCGACGAACGAAGAACAGTACGCCGGCAACGCCGCTCCTCAGTCGGCCATTTTTCTGTTTCGAGCTACACTAGTGAACTCTGGCGGACGTTTCGATTGGAGCGATTCATAGTTTAGAGATATTCATATATCGTAAGCTTCAGCAACGTCCTTTCAACTGATCGGTGGCCTTCAAACGACACTCCAGCACCCTGCCGCTCGCGCTCGACCTCTCCAAGAGAACCCGCGGCTTCCATTGGCGGAGACGCCTTCCGGTAGTGGTAATTCTCAACGCCAACGGCTCGATCGGCTCTGGATCTGATTACCCACTTCATTTTAGCGGCAAATCTGTGAGTTGGAAGGATTTTGGACACTGTTCAGCAAGATTAAAGGCTTTTGAACGAGTTTCGTAGGGACTTCCAAGGGCCCTGCTCTTAGGAATTAGGGAATCATGATTGGAGTTGGGAAGATCAAGCAATATTCTAATGTCCTCGAAAAACCTCTCAGCAAGGGAAAACAGGAGGTGAGTTTGAGTGCATTTGCATTCTTGTTCTCCGAACTTGTGCAATACAATCAGACTCAAGTTGACAATATTGCTGAGTTAGAACGAAGGTTGGAGGATGCGGGCTATGCAGTTGGTGCTCGAGTATTGGAACTTTTTTGTCACCGAGAGAAGGGAAATAGACGGGAGACGCGATTATTAGGCATTCTCTCATTTGTACACAGCACAATTTGGAAGGTTTTGTTTGGAAAGGTTGCTGACTCACTTGAGAAAGGCACTGAACATGAAGATGAGTACATGATCAGTGAAAAGGAGCTGCTTGTGAATAGATTTATTTCAATTCCAAAAGACATGGGTGCGTTTAACTGCGGGGCTTTTGTTGCTGGCATTGTCAGAGTAAGTGCTGCAAGGCCTCTTTGAAATGGATGGTATTCTAGTTTATGTAAGTTCTGATGTGTTCCGTCTTGCTTAAAGGGTGTGCTGGACAATGCTGGGTTTCCCGCTGTTGTAACGGCACATTTTGTTCCGGTGGAGGGCCAACAGCGACCACGGACGACTATTTTGATTAAATTTGCAGAAGAGGTATTAGCAAGAGAAGCAAGATTAGGTTGATATATGGTTTGAAGTAAGGTTGGGTATTGTTCTTATGCTTTTAGCATTTTGATATTGGAGAACGGTGAATTTCTTTCTGGCCATTGAACACAGAATTTCACCTGATATCTCTCTGTTGTGAAGCTGTAAGGAAATTTGTGCTCTTCAATTAATCTGTATAATTGATGGCATCGATTACTTTGTTGCGAGCAAAATGAGCTGTGAAACTATAAATGGTTTATTCAGCATAAATGTAAACCGAAGCAAATTCAAAACCTCCCTCCCAATTGCTTTTTTCGTTTAATCTATCAGTACTTGGACTTATATTAACTTGTTGTGTCTAAGCTATAAGATTTAGATACAAATTAATTGTTTGAATTGTTTTTCCATTAAGAATCATTGGTACAAAGCCATTTTCT

Coding sequence (CDS)

ATGATTGGAGTTGGGAAGATCAAGCAATATTCTAATGTCCTCGAAAAACCTCTCAGCAAGGGAAAACAGGAGGTGAGTTTGAGTGCATTTGCATTCTTGTTCTCCGAACTTGTGCAATACAATCAGACTCAAGTTGACAATATTGCTGAGTTAGAACGAAGGTTGGAGGATGCGGGCTATGCAGTTGGTGCTCGAGTATTGGAACTTTTTTGTCACCGAGAGAAGGGAAATAGACGGGAGACGCGATTATTAGGCATTCTCTCATTTGTACACAGCACAATTTGGAAGGTTTTGTTTGGAAAGGTTGCTGACTCACTTGAGAAAGGCACTGAACATGAAGATGAGTACATGATCAGTGAAAAGGAGCTGCTTGTGAATAGATTTATTTCAATTCCAAAAGACATGGGTGCGTTTAACTGCGGGGCTTTTGTTGCTGGCATTGTCAGAGTAAGTGCTGCAAGGCCTCTTTGA

Protein sequence

MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGAFNCGAFVAGIVRVSAARPL*
Homology
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BLAST of Cucsa.348620 vs. Swiss-Prot
Match: TPPC5_DICDI (Trafficking protein particle complex subunit 5 OS=Dictyostelium discoideum GN=trappc5 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.5e-58
Identity = 107/180 (59.44%), Postives = 145/180 (80.56%), Query Frame = 1 

Query: 12  NVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELFC 71
           N++++PLSKGK E+++S+FAFLFSE++QY Q ++    ELE++L D GY++G R+LEL C
Sbjct: 7   NIVDRPLSKGKGEINISSFAFLFSEMIQYCQDRIKAGHELEKKLSDMGYSIGPRLLELLC 66

Query: 72  HREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISI 131
            REK ++RET+LLGILSF+H+T+WK LFGK ADSLEK TE +DEYMIS+  ++VN+FIS+
Sbjct: 67  VREKNSKRETKLLGILSFIHTTVWKSLFGKPADSLEKSTEADDEYMISDNNMVVNKFISL 126

Query: 132 PKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLAREA 191
           PK + + NC AFVAGI+ G+L +A FPA VTAH V VEG++ P+T ILIKF  EV+ R A
Sbjct: 127 PKHLSSLNCAAFVAGIIEGILCSAEFPARVTAHNVAVEGKRFPKTVILIKFNPEVIERNA 186

[Close]
BLAST of Cucsa.348620 vs. Swiss-Prot
Match: TRS31_SCHPO (Transport protein particle subunit trs31 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=trs31 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 9.4e-45
Identity = 95/184 (51.63%), Postives = 129/184 (70.11%), Query Frame = 1 

Query: 12  NVLEKPLSKGKQ-EVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELF 71
           +V E+ L+K +  +V+LS+FAF+FSEL+Q  Q+QV  I E E +L + GY VG +++EL 
Sbjct: 27  SVYEQNLNKIRNSDVNLSSFAFIFSELIQRIQSQVSGIQEFEEKLNEHGYRVGQKLVELV 86

Query: 72  CHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 131
             RE+  +RETR+LGIL ++HS++WK LFGK ADSLEK  E  DEYMI +   L+N+FIS
Sbjct: 87  VWRERNPKRETRILGILQYIHSSVWKYLFGKHADSLEKSKEASDEYMIVDNNPLLNKFIS 146

Query: 132 IPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLARE 191
           +PK+M   NC A++AGI+ G LD+A FP   +AH VP+  Q   RT ILIK    V+ARE
Sbjct: 147 VPKEMNQLNCCAYLAGIIEGFLDSAQFPCKASAHSVPL-SQYPYRTVILIKLDPSVIARE 206

Query: 192 ARLG 195
             LG
Sbjct: 207 EVLG 209

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BLAST of Cucsa.348620 vs. Swiss-Prot
Match: TPPC5_HUMAN (Trafficking protein particle complex subunit 5 OS=Homo sapiens GN=TRAPPC5 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.5e-42
Identity = 92/183 (50.27%), Postives = 123/183 (67.21%), Query Frame = 1 

Query: 11  SNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELF 70
           S +LE+ L++ + EVSLSAFA LFSELVQ+ Q++V ++AEL+ RL   G  VGARVL+  
Sbjct: 10  SALLERALARPRTEVSLSAFALLFSELVQHCQSRVFSVAELQSRLAALGRQVGARVLDAL 69

Query: 71  CHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
             REKG RRET++LG L FV   +WK LFGK AD LE+  +    + I E+E L+N +IS
Sbjct: 70  VAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYIS 129

Query: 131 IPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLARE 190
           +PK+    NC +F AGIV  VL ++GFPA VTAH+          TT++IKF E V+AR+
Sbjct: 130 VPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHW-------HKGTTLMIKFEEAVIARD 185

Query: 191 ARL 194
             L
Sbjct: 190 RAL 185

[Close]
BLAST of Cucsa.348620 vs. Swiss-Prot
Match: TPPC5_BOVIN (Trafficking protein particle complex subunit 5 OS=Bos taurus GN=TRAPPC5 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 9.7e-42
Identity = 92/183 (50.27%), Postives = 122/183 (66.67%), Query Frame = 1 

Query: 11  SNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELF 70
           S +LE+ L++ + EVSLSAFA LFSELVQ+ Q++V  +AEL+ RL   G  VGARVL+  
Sbjct: 10  SALLERALARPRTEVSLSAFALLFSELVQHCQSRVFTVAELQARLAALGRQVGARVLDAL 69

Query: 71  CHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
             REKG RRET++LG L FV   +WK LFGK AD LE+  +    + I E+E L+N +IS
Sbjct: 70  VAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYIS 129

Query: 131 IPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLARE 190
           +PK+    NC +F AGIV  VL ++GFPA VTAH+          TT++IKF E V+AR+
Sbjct: 130 VPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHW-------HKGTTLMIKFEEAVIARD 185

Query: 191 ARL 194
             L
Sbjct: 190 RAL 185

[Close]
BLAST of Cucsa.348620 vs. Swiss-Prot
Match: TPPC5_MOUSE (Trafficking protein particle complex subunit 5 OS=Mus musculus GN=Trappc5 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.7e-41
Identity = 92/183 (50.27%), Postives = 122/183 (66.67%), Query Frame = 1 

Query: 11  SNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELF 70
           S +LE+ L + + EVSLSAFA LFSELVQ+ Q++V ++AEL+ RL   G  VGARVL+  
Sbjct: 10  SALLERALVRPRTEVSLSAFALLFSELVQHCQSRVFSVAELQARLAALGRQVGARVLDAL 69

Query: 71  CHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
             REKG RRET++LG L FV   +WK LFGK AD LE+  +    + I E+E L+N +IS
Sbjct: 70  VAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYIS 129

Query: 131 IPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLARE 190
           +PK+    NC +F AGIV  VL ++GFPA VTAH+          TT++IKF E V+AR+
Sbjct: 130 VPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHW-------HKGTTLMIKFEEAVIARD 185

Query: 191 ARL 194
             L
Sbjct: 190 RAL 185

[Close]
BLAST of Cucsa.348620 vs. TrEMBL
Match: A0A0A0KA36_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087720 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 5.3e-103
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1 

Query: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVLAREARLG
Sbjct: 181 KFAEEVLAREARLG 194

[Close]
BLAST of Cucsa.348620 vs. TrEMBL
Match: A0A067EWE0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026545mg PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 7.1e-100
Identity = 187/194 (96.39%), Postives = 191/194 (98.45%), Query Frame = 1 

Query: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGKIKQYSNVL+KPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLEL CHR+KGNRRETRLLGILSFVHST+WKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMG FNCGAFVAGIVRGVLD+AGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVL REARLG
Sbjct: 181 KFAEEVLRREARLG 194

[Close]
BLAST of Cucsa.348620 vs. TrEMBL
Match: M0U3V9_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 7.1e-100
Identity = 186/194 (95.88%), Postives = 192/194 (98.97%), Query Frame = 1 

Query: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGKIKQY+NVLEKPLS+G+QEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYANVLEKPLSRGRQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLEL CHREKGNRRETRLLGILSFVHST+WKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMGAFNCGAFVAGIV+GVLDNAGFPAVVTAHFVP+EGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPMEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVL REARLG
Sbjct: 181 KFAEEVLRREARLG 194

[Close]
BLAST of Cucsa.348620 vs. TrEMBL
Match: A9PAN6_POPTR (Transport protein particle component Bet3 OS=Populus trichocarpa GN=POPTR_0006s20140g PE=2 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 7.1e-100
Identity = 187/194 (96.39%), Postives = 191/194 (98.45%), Query Frame = 1 

Query: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLEL CHR+KGNRRETRLLGILSFVHST+WKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMG FNCGAFVAGIVRGVLD+AGFPAVVTAHFVP+EGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVL REARLG
Sbjct: 181 KFAEEVLRREARLG 194

[Close]
BLAST of Cucsa.348620 vs. TrEMBL
Match: A0A067KUL6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04011 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 7.1e-100
Identity = 187/194 (96.39%), Postives = 191/194 (98.45%), Query Frame = 1 

Query: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGKIKQYSNVL+KPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLEL CHREKGNRRETRLLGILSFVHST+WKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMG FNCGAFVAGIVRGVLD+AGFPAVVTAHFVP+EGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVL REARLG
Sbjct: 181 KFAEEVLRREARLG 194

[Close]
BLAST of Cucsa.348620 vs. TAIR10
Match: AT5G58030.1 (AT5G58030.1 Transport protein particle (TRAPP) component)

HSP 1 Score: 363.2 bits (931), Expect = 9.8e-101
Identity = 181/193 (93.78%), Postives = 190/193 (98.45%), Query Frame = 1 

Query: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQYSNVL+KPLSKGKQEVSL+AFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKMKQYSNVLDKPLSKGKQEVSLTAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120
           AVG+RVLEL C+REKGNRRETRLLGILSFVHST+WKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGSRVLELLCNREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMG FNCGAFVAGIV+GVLDNAGFPAVVTAHFVP+EGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPIEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARL 194
           KFA+EVL REARL
Sbjct: 181 KFADEVLKREARL 193

[Close]
BLAST of Cucsa.348620 vs. NCBI nr
Match: gi|449445664|ref|XP_004140592.1| (PREDICTED: trafficking protein particle complex subunit 5 [Cucumis sativus])

HSP 1 Score: 381.7 bits (979), Expect = 7.6e-103
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1 

Query: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVLAREARLG
Sbjct: 181 KFAEEVLAREARLG 194

[Close]
BLAST of Cucsa.348620 vs. NCBI nr
Match: gi|659120080|ref|XP_008460002.1| (PREDICTED: trafficking protein particle complex subunit 5 [Cucumis melo])

HSP 1 Score: 380.6 bits (976), Expect = 1.7e-102
Identity = 193/194 (99.48%), Postives = 194/194 (100.00%), Query Frame = 1 

Query: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGKIKQYSNVLE+PLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLERPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVLAREARLG
Sbjct: 181 KFAEEVLAREARLG 194

[Close]
BLAST of Cucsa.348620 vs. NCBI nr
Match: gi|802592240|ref|XP_012071476.1| (PREDICTED: trafficking protein particle complex subunit 5 [Jatropha curcas])

HSP 1 Score: 371.3 bits (952), Expect = 1.0e-99
Identity = 187/194 (96.39%), Postives = 191/194 (98.45%), Query Frame = 1 

Query: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGKIKQYSNVL+KPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLEL CHREKGNRRETRLLGILSFVHST+WKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMG FNCGAFVAGIVRGVLD+AGFPAVVTAHFVP+EGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVL REARLG
Sbjct: 181 KFAEEVLRREARLG 194

[Close]
BLAST of Cucsa.348620 vs. NCBI nr
Match: gi|224088250|ref|XP_002308390.1| (transport protein particle component Bet3 [Populus trichocarpa])

HSP 1 Score: 371.3 bits (952), Expect = 1.0e-99
Identity = 187/194 (96.39%), Postives = 191/194 (98.45%), Query Frame = 1 

Query: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLEL CHR+KGNRRETRLLGILSFVHST+WKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMG FNCGAFVAGIVRGVLD+AGFPAVVTAHFVP+EGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVL REARLG
Sbjct: 181 KFAEEVLRREARLG 194

[Close]
BLAST of Cucsa.348620 vs. NCBI nr
Match: gi|568840038|ref|XP_006473978.1| (PREDICTED: trafficking protein particle complex subunit 5 [Citrus sinensis])

HSP 1 Score: 371.3 bits (952), Expect = 1.0e-99
Identity = 187/194 (96.39%), Postives = 191/194 (98.45%), Query Frame = 1 

Query: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGKIKQYSNVL+KPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLEL CHR+KGNRRETRLLGILSFVHST+WKVLFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMG FNCGAFVAGIVRGVLD+AGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVL REARLG
Sbjct: 181 KFAEEVLRREARLG 194

The following BLAST results are available for this feature:
BLAST of Cucsa.348620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TPPC5_DICDI1.5e-5859.44Trafficking protein particle complex subunit 5 OS=Dictyostelium discoideum GN=tr... [more]
TRS31_SCHPO9.4e-4551.63Transport protein particle subunit trs31 OS=Schizosaccharomyces pombe (strain 97... [more]
TPPC5_HUMAN7.5e-4250.27Trafficking protein particle complex subunit 5 OS=Homo sapiens GN=TRAPPC5 PE=1 S... [more]
TPPC5_BOVIN9.7e-4250.27Trafficking protein particle complex subunit 5 OS=Bos taurus GN=TRAPPC5 PE=2 SV=... [more]
TPPC5_MOUSE1.7e-4150.27Trafficking protein particle complex subunit 5 OS=Mus musculus GN=Trappc5 PE=1 S... [more]
BLAST of Cucsa.348620 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KA36_CUCSA5.3e-103100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087720 PE=4 SV=1[more]
A0A067EWE0_CITSI7.1e-10096.39Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026545mg PE=4 SV=1[more]
M0U3V9_MUSAM7.1e-10095.88Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1[more]
A9PAN6_POPTR7.1e-10096.39Transport protein particle component Bet3 OS=Populus trichocarpa GN=POPTR_0006s2... [more]
A0A067KUL6_JATCU7.1e-10096.39Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04011 PE=4 SV=1[more]
BLAST of Cucsa.348620 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G58030.19.8e-10193.78 Transport protein particle (TRAPP) component[more]
BLAST of Cucsa.348620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445664|ref|XP_004140592.1|7.6e-103100.00PREDICTED: trafficking protein particle complex subunit 5 [Cucumis sativus][more]
gi|659120080|ref|XP_008460002.1|1.7e-10299.48PREDICTED: trafficking protein particle complex subunit 5 [Cucumis melo][more]
gi|802592240|ref|XP_012071476.1|1.0e-9996.39PREDICTED: trafficking protein particle complex subunit 5 [Jatropha curcas][more]
gi|224088250|ref|XP_002308390.1|1.0e-9996.39transport protein particle component Bet3 [Populus trichocarpa][more]
gi|568840038|ref|XP_006473978.1|1.0e-9996.39PREDICTED: trafficking protein particle complex subunit 5 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007194TRAPP_component
IPR016696TRAPP-I_su5
IPR024096NO_sig/Golgi_transp_ligand-bd
IPR007194TRAPP_component
IPR016696TRAPP-I_su5
IPR024096NO_sig/Golgi_transp_ligand-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030244 cellulose biosynthetic process
biological_process GO:0048193 Golgi vesicle transport
cellular_component GO:0005622 intracellular
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.348620.2Cucsa.348620.2mRNA
Cucsa.348620.1Cucsa.348620.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007194Transport protein particle (TRAPP) componentPFAMPF04051TRAPPcoord: 30..149
score: 1.3
IPR016696TRAPP I complex, subunit 5PIRPIRSF017479TRAPP_1_Trs31coord: 3..152
score: 2.5
IPR016696TRAPP I complex, subunit 5PANTHERPTHR2090241-2 PROTEIN ANTIGEN-RELATEDcoord: 1..149
score: 3.4
IPR024096NO signalling/Golgi transport ligand-binding domainunknownSSF111126Ligand-binding domain in the NO signalling and Golgi transportcoord: 23..149
score: 1.1
NoneNo IPR availableGENE3DG3DSA:3.30.1380.20coord: 24..149
score: 1.1
NoneNo IPR availablePANTHERPTHR20902:SF0TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 5coord: 1..149
score: 3.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.348620Cla007039Watermelon (97103) v1cgywmB626
Cucsa.348620Csa6G087720Cucumber (Chinese Long) v2cgycuB490
Cucsa.348620MELO3C022418Melon (DHL92) v3.5.1cgymeB564
Cucsa.348620ClCG06G001160Watermelon (Charleston Gray)cgywcgB595
Cucsa.348620CSPI06G06750Wild cucumber (PI 183967)cgycpiB517
Cucsa.348620Lsi09G018230Bottle gourd (USVL1VR-Ls)cgylsiB562
Cucsa.348620MELO3C022418.2Melon (DHL92) v3.6.1cgymedB565
Cucsa.348620CsaV3_6G007090Cucumber (Chinese Long) v3cgycucB532
Cucsa.348620Cla97C06G110420Watermelon (97103) v2cgywmbB596
Cucsa.348620Bhi12G002057Wax gourdcgywgoB696
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.348620Cucurbita pepo (Zucchini)cgycpeB0912
Cucsa.348620Cucurbita maxima (Rimu)cgycmaB0956