Cucsa.341340 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTAGTTTTTTAAAATGTAGGGTTCTAGGTCAAATAAGGTGGTGAAATATCCAAATTACCCTCAGCCAAAAAATGCTAAAAGGTAGGTCCTTTTTCTCCCACTTCCTCCATCTTCACGTCTTCCATTCTCAAAATCTCTCACGCACAGGTGACTTTTACGAAGGGCTTTGGATGGTGACGACGAGGCTTTAAACGGCGACGACGAGCTTCAAACGATGACGTTGTGGCTTCAAATGACGATGACAGCTAGGTTTATAAAGATTTTCACACAACTTGTGGGTTTTTTTTTTCTATTTTACTTCTATTTTACTTCAGAAACATTTTTCCATTATATATGCAACTAGGGATCTAAGGACACAAAAACTCCTCTATATGCAACTGGTATTCGCGAATATGAATCCTAATTTCTGCTTCTCTTTACCTAACAACAAGCAAAAAGTGAATGAGTTTTCTAAACTACTTTTTCTTTTGGAGCCTCTGATCTACCTGTGTTCACAATTTCCCCCTTGTTTTGGTTAAGTGGCGAGATGCAACAAACAATATTCTAAATCTTATATTCATATTTCGTTTAGGTGTCAGTGGTGTGGCCATTGTGCATGTTATATCGCATAAAGCTTTCTTTATATGTTGATTAAATTACACAACATATGGAGCTTTTTCTTCCTATTGTTCTTGCATTTACTTTTTATTTTGTAGATATCTAATTGCACTTATACTTTTTTGGAGATATGGGACAAGTTGGTCTCTTACCTCCTAGTATCAAACATCTGCAATTTAGTCAGCTTCAGAAAATTGAAAGTGTGAGATTCATGTCACATACTGGAACATCGCAAGTTTCTTGTCTCATATGAATCAGATTGTAAATTACTATTTCTTCAATCAATATCATCTTAGCCAAAAAATATTGTGTTATCAAATTACATGCTATATAGATCTATCATCCATGCTTGCCAAGGGAATAAGAGAATCTTGACTAGTCGAAAATGTAAAATTTAAATTCTGTTTTATTACCTCTCTGTATTCATCTCTAACAATTATCTCGAAGTCTCAATGCCAAAAGCAAATAATAGTGAACTATATGATAAATACCCTTGGTTCTGCGTTATTAGCTAAAATTAACTTCTAGAATTATACCATGACATCCTCAATCTAAAGTCTGGTATTTTGTAGTAAAGAGTGTCCATTTTTCTACAATCAGATTCTAAAGTTTGGTATTTTGCAGTAATGATGACGAGGTTTAAAGATTTTCCAATCTACATCTACTTCAACTTTGTATGTAGCAGACATTAGGACTATCTAGTCTCACCCTAGTGTAAATAGGACACGTTCGTTGTTCATTTTCATGACTTGATTCTTTGTCTTTTTTTATCTCTTTTGTAGGATTTAGAGAAAGTTATTGATCATAAAATCTCAAGTTCACACTACAAAAAATATCAATTTGATCGTTAAAATAGTAAGTGATGTACATTGTTAATTTAGTTTTTGTGCATATTTTTAGGTTGGTTTAAGAATTAAAGTGATACTTGGGAACTTTTTAGGTTGTTTTGAGAATCAAAATATGACATAGACACTTTTTAGGAATTTTTGTACGCGGTTTTTGGAGTTGGGATGTAGTACATTTTAAGAGGTTAGGAGTGAAATGGTTAGCCATAGTGACATGTACTTCTTGTTCCAGAATGTGTAATATATTTTGTAATCTAATAGATGCTAACTAGTTGAATTGATTCTGCCCCCAGGATGGTCTTTGTATTCCAGAGCTCCAACACAAAAGTTTTTTCGAATTTGAGGAGTGCAAAGTGTTTCTTTTAGATCTTTAGAAAAGCCACTTCTGCTTCCAGTCACAGATTTGCCAGGGAGACCCAATTCCTTCGATCCAAGCCTCACGAACCAGCAAGTTTGGGTTAGATTTGGTAAGGATTGATTCAGTTCTAATCTTCATATTTTGTCTTAATTGTTTAGGCTTTTAGCAATTGAACTTGATAATTGTTCAAGGAAGTGGGTTTTCAGATTAACAACTGTTTTGAATGTTTGAAAGTATGTTTTTATGTTTTCTTATAAAAGAAATGTTTTACGTGATTTAAGAATTAACTAAAATTGTTTTGAATGTTTTGATGGATTTTACTAAAAGAATGTTTGATTTTATGGAAAGTAGTGATTGATTGAAAGCTTGAAACTCGAAAATATTTAAAGCTTTTTTTGTAATTTTACGGCAAGTCTTTTCAAAAGTTTTGTTGTGTTGAAAGTTATTCAAACATCTTGGTTTATTGAATGGCTATTTGAAAGTTTTAGTTTAAAATGTTTGGTTTTGAAGGCTTATTTTGATTTAAATATTTTGTTTTAAATGTATCGTTTGTCACAAATTTTTAATTGGAAAAGTTTTGCAATGACTTCGTATTTTTGTGTACAAAAGTTTTGAAAGAAAATGAATTTCAAAGCTTGATTTGGTATGAATTTTTACACATACGAACGAAGGTTGGTTGGTTTGAATTTCACAATTCAAAGTTGAGGGTGGAATAAAACAATCACCATAGTTAGGGGTAGTTTTTGCAATTTGTGTTACATTTTCATTAATACTCTGTTTTTTGTTTTAGTACTTAAATTTTTTATGGTTTTTAATAGTAGGGATGATAATGTTGATTTTACATTTATGATTAAAAAAAATGTTGATTTTAAATCAAATTCTTTTGCAAGGTTATGCTCTTGATTCTCACAAAATTGAGTAAGCTCTGCTCAAAAGCCTCTGTCTTGTAGAACTCACTAAACAATGGGTGATTATCATTTCATTCACAAGGATGTTGAAGGAGCCTCCACTCAGTGGGATGACATTCAGAGAAAGCTGGGAAACCTACCTCCGAAGCCTGCTCCATTCAAGCCACCAGCCTTCACACCTGCCCAAGATGACGCATCCGTCCCCAAAGACAAGTCTTGGATTGACCAGAAGAATGAAGAGGAGCTTGAAGACCTTGAGGATGACCTAGATCTTGATGATGACAGCTTCCTCCAAGAGTATAGGTTGGTTTTCTATTCATTAGTTACCTTTCATGTTTTGTTGTTGCTTTTCTGTAATTTTATCCATCGCTGGGAAAATAAATAAAGGTAATTAAATAAGTAAAACTTAGATCAATTGATGCAGAATTGGTCAATATGGTGACCAGGTGGAAATAATATGACTCCGATTGATTTATTAGTCAAAGCAAATCTTAATTTTTCCTCTCTATTTAACGAGTATTAGATTTTTTTATTTAATTAGATGTTCACCATCTCGTTTATTAGTTAACTAATTACCTGATCTCTCCTCTTCGTCCAATTTCTTACTCAAAGTCGTACCCTTGGGGTTTCTTTGACAAAATAATTATGAGATCTCTGAATTTGATGCAACCATATTTTTGGTATAGGAAAAAGAGGTTGATGGAGATTAGAGAAGCAGCAAAAATCTCTAAATTTGGATCAGTAAATCCAATATCGGGATCAGATTTTGTGCGAGAGGTTTCACAGGCTCCATCTGATGTTTGGGTTGTCGTTATTCTCTACAAAGAAGGGTACCATCCATATCCAATGCCCTGAATGTTTTTATGTTCTTTATATTCTGTTGATCTTTACTCCCTGGTGTGTTAATATCATTGTTATGTTATATTATAATCTCATTGTAGAATTCAAGAATGCGATGTGTTGATGAATTGTTTGCAAGAACTTGCTGCGAGATATCCAGCCACAAAATTTGTTAAAATAATATCCACAGATTGCATTCCCAACTACCCAGATTGTAATCTTCCTACTTTGTTAGTTTACAACAATGGTGCAGTGAAAGCAAATTATGTGGGTCTTCGAAGTTTTGGCAGAAGATGCACACCAGAAGGTACACAGCTGTATAAAACTAAAAATGCCTCGTTTGCTTTAGTCCTCTGCAGCTTCATATCTAGTTAGTATAGTGTTAATGTTCAACAGTCAACATTCGTGTTTGGTTAGATATTTGAAGGTATGCTAACATTTTCCACCTTTATGTGAAGTCAATGATTTTATAATGGTACACTTTGAATTTGAAATTGTGTCAAATGGCTGAGTTCTCAGCCATCAAGGTCCATTGGTTCTGTGACCCTGTTAAGTTGAATTCATGAGGTTCCTTGGCCGTTTGGGTTATGTTTAGCTCGAGGCAGGGTTTGTGGCATTACGATTGAGGAGGTACTCCTCCATTTTGGGATGAGGGCAGGATTTTGTAGTAGTTTTGTTTCTTTGTTTAGAGTGTATAATGTCTTGAGAAAAATCTCAAATGGTAGATTAGTTAGGGAAGGTTGAGAGATCATGAGAAAAAGGTTTGAGGTTCTGGTTGCTAGTTTTAATGCATCCATGGGCGTTTGTAACCTAACATTTTTGTAATTGAGCTTGATTTGACTTTTTGCAATTAGTTTGTGGGTGGATTCCTTTTTTTTTTTTTGTATGTTCCAATATACTTTTTATCTCTCAATGAAATTGCAGTTTCTCACTAAAGATAAAACAAAAACAAAACTTGGGTTGTTGGTTGTGTGAATTGTACAAGGGAACCTTTACAAACTTTGCTTGTGAAGAAACCAATGACTTGGAAACTAGAACTATAATGAACTCTGCTGGTTGGAATTTGTCTATTGGGGGGCCTCTTTAAATTCTAACCTCTAAAATCCCACCTTCAGTACTGTAAGCGCAAAGTATTTTATTTGCCATATGCTTCTAGTTGGACAGTTTTTGAAACCATTTATGATTTATTCCATATTTTTGTTGTGGTTCTAGGTGTTGCATTAGTTCTTTGTCAAGCAGATCCAGTGCTTAATGATGGTCAGTCTGGAAATGATGATGGATCGAGACAATCTGTGCTTGAAAGCGTACGCCGAAAGATAATTGAGAAAGTGGTGAGAGATCATGAAGATGAGAATGACGAAGGGTCTTTGAGTGATTAGTTTTTGAATCATTTGCCGCCTTCTTTCTAACTTCTTGTTTCTTAGTTGGAGGTTGAAAAGTAATGTTTAGTTAAAGTACACCTACAAATTGTGTTCATGCGCATTCCTGTTTCAATCAAACGTTTTGTTATCTAATGGTTGTGTGATGTATTGAAGTTCAGAAGTTTTGGAAGTTCAATGATTTGGGTATTTAGGCAATAGGCATACCTACCAAACTTAAGAATTCAATGAAAAATAGTTGTGTATTGTGTTTTTACC attagttttttaaaatgtagggttctaggtcaaataaggtggtgaaatatccaaattaccctcagccaaAAAATGCTAAAAGGTAGGTCCTTTTTCTCCCACTTCCTCCATCTTCACGTCTTCCATTCTCAAAATCTCTCACGCACAGGTGACTTTTACGAAGGGCTTTGGATGGTGACGACGAGGCTTTAAACGGCGACGACGAGCTTCAAACGATGACGTTGTGGCTTCAAATGACGATGACAGCTAGGTTTATAAAGATTTTCACACAACTTGATGGTCTTTGTATTCCAGAGCTCCAACACAAAAGTTTTTTCGAATTTGAGGAGTGCAAAGTGTTTCTTTTAGATCTTTAGAAAAGCCACTTCTGCTTCCAGTCACAGATTTGCCAGGGAGACCCAATTCCTTCGATCCAAGCCTCACGAACCAGCAAGTTTGGGTTAGATTTGGTTATGCTCTTGATTCTCACAAAATTGAGTAAGCTCTGCTCAAAAGCCTCTGTCTTGTAGAACTCACTAAACAATGGGTGATTATCATTTCATTCACAAGGATGTTGAAGGAGCCTCCACTCAGTGGGATGACATTCAGAGAAAGCTGGGAAACCTACCTCCGAAGCCTGCTCCATTCAAGCCACCAGCCTTCACACCTGCCCAAGATGACGCATCCGTCCCCAAAGACAAGTCTTGGATTGACCAGAAGAATGAAGAGGAGCTTGAAGACCTTGAGGATGACCTAGATCTTGATGATGACAGCTTCCTCCAAGAGTATAGGAAAAAGAGGTTGATGGAGATTAGAGAAGCAGCAAAAATCTCTAAATTTGGATCAGTAAATCCAATATCGGGATCAGATTTTGTGCGAGAGGTTTCACAGGCTCCATCTGATGTTTGGGTTGTCGTTATTCTCTACAAAGAAGGAATTCAAGAATGCGATGTGTTGATGAATTGTTTGCAAGAACTTGCTGCGAGATATCCAGCCACAAAATTTGTTAAAATAATATCCACAGATTGCATTCCCAACTACCCAGATTGTAATCTTCCTACTTTGTTAGTTTACAACAATGGTGCAGTGAAAGCAAATTATGTGGGTCTTCGAAGTTTTGGCAGAAGATGCACACCAGAAGGTGTTGCATTAGTTCTTTGTCAAGCAGATCCAGTGCTTAATGATGGTCAGTCTGGAAATGATGATGGATCGAGACAATCTGTGCTTGAAAGCGTACGCCGAAAGATAATTGAGAAAGTGGTGAGAGATCATGAAGATGAGAATGACGAAGGGTCTTTGAGTGATTAGTTTTTGAATCATTTGCCGCCTTCTTTCTAACTTCTTGTTTCTTAGTTGGAGGTTGAAAAGTAATGTTTAGTTAAAGTACACCTACAAATTGTGTTCATGCGCATTCCTGTTTCAATCAAACGTTTTGTTATCTAATGGTTGTGTGATGTATTGAAGTTCAGAAGTTTTGGAAGTTCAATGATTTGGGTATTTAGGCAATAGGCATACCTACCAAACTTAAGAATTCAATGAAAAATAGTTGTGTATTGTGTTTTTACC ATGGGTGATTATCATTTCATTCACAAGGATGTTGAAGGAGCCTCCACTCAGTGGGATGACATTCAGAGAAAGCTGGGAAACCTACCTCCGAAGCCTGCTCCATTCAAGCCACCAGCCTTCACACCTGCCCAAGATGACGCATCCGTCCCCAAAGACAAGTCTTGGATTGACCAGAAGAATGAAGAGGAGCTTGAAGACCTTGAGGATGACCTAGATCTTGATGATGACAGCTTCCTCCAAGAGTATAGGAAAAAGAGGTTGATGGAGATTAGAGAAGCAGCAAAAATCTCTAAATTTGGATCAGTAAATCCAATATCGGGATCAGATTTTGTGCGAGAGGTTTCACAGGCTCCATCTGATGTTTGGGTTGTCGTTATTCTCTACAAAGAAGGAATTCAAGAATGCGATGTGTTGATGAATTGTTTGCAAGAACTTGCTGCGAGATATCCAGCCACAAAATTTGTTAAAATAATATCCACAGATTGCATTCCCAACTACCCAGATTGTAATCTTCCTACTTTGTTAGTTTACAACAATGGTGCAGTGAAAGCAAATTATGTGGGTCTTCGAAGTTTTGGCAGAAGATGCACACCAGAAGGTGTTGCATTAGTTCTTTGTCAAGCAGATCCAGTGCTTAATGATGGTCAGTCTGGAAATGATGATGGATCGAGACAATCTGTGCTTGAAAGCGTACGCCGAAAGATAATTGAGAAAGTGGTGAGAGATCATGAAGATGAGAATGACGAAGGGTCTTTGAGTGATTAG MGDYHFIHKDVEGASTQWDDIQRKLGNLPPKPAPFKPPAFTPAQDDASVPKDKSWIDQKNEEELEDLEDDLDLDDDSFLQEYRKKRLMEIREAAKISKFGSVNPISGSDFVREVSQAPSDVWVVVILYKEGIQECDVLMNCLQELAARYPATKFVKIISTDCIPNYPDCNLPTLLVYNNGAVKANYVGLRSFGRRCTPEGVALVLCQADPVLNDGQSGNDDGSRQSVLESVRRKIIEKVVRDHEDENDEGSLSD*
BLAST of Cucsa.341340 vs. Swiss-Prot
Match: PDCL3_HUMAN (Phosducin-like protein 3 OS=Homo sapiens GN=PDCL3 PE=1 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 2.7e-36 Identity = 87/236 (36.86%), Postives = 131/236 (55.51%), Query Frame = 1
BLAST of Cucsa.341340 vs. Swiss-Prot
Match: PDCL3_PONAB (Phosducin-like protein 3 OS=Pongo abelii GN=PDCL3 PE=2 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 3.0e-35 Identity = 86/236 (36.44%), Postives = 130/236 (55.08%), Query Frame = 1
BLAST of Cucsa.341340 vs. Swiss-Prot
Match: VIAF1_DROME (Viral IAP-associated factor homolog OS=Drosophila melanogaster GN=viaf PE=1 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 5.2e-35 Identity = 83/243 (34.16%), Postives = 144/243 (59.26%), Query Frame = 1
BLAST of Cucsa.341340 vs. Swiss-Prot
Match: PDCL3_DANRE (Phosducin-like protein 3 OS=Danio rerio GN=pdcl3 PE=2 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.0e-34 Identity = 87/240 (36.25%), Postives = 136/240 (56.67%), Query Frame = 1
BLAST of Cucsa.341340 vs. Swiss-Prot
Match: PDCL3_RAT (Phosducin-like protein 3 OS=Rattus norvegicus GN=Pdcl3 PE=1 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 7.5e-34 Identity = 84/236 (35.59%), Postives = 135/236 (57.20%), Query Frame = 1
BLAST of Cucsa.341340 vs. TrEMBL
Match: A0A0A0LDG8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G849940 PE=4 SV=1) HSP 1 Score: 521.2 bits (1341), Expect = 7.3e-145 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 1
BLAST of Cucsa.341340 vs. TrEMBL
Match: B9RBM1_RICCO (Phosducin, putative OS=Ricinus communis GN=RCOM_1678550 PE=4 SV=1) HSP 1 Score: 426.4 bits (1095), Expect = 2.4e-116 Identity = 206/254 (81.10%), Postives = 230/254 (90.55%), Query Frame = 1
BLAST of Cucsa.341340 vs. TrEMBL
Match: W9SIW8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017639 PE=4 SV=1) HSP 1 Score: 422.5 bits (1085), Expect = 3.5e-115 Identity = 202/254 (79.53%), Postives = 229/254 (90.16%), Query Frame = 1
BLAST of Cucsa.341340 vs. TrEMBL
Match: D7UBF0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0171g00260 PE=4 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 4.6e-115 Identity = 207/254 (81.50%), Postives = 224/254 (88.19%), Query Frame = 1
BLAST of Cucsa.341340 vs. TrEMBL
Match: A0A067LNA7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10160 PE=4 SV=1) HSP 1 Score: 420.6 bits (1080), Expect = 1.3e-114 Identity = 204/254 (80.31%), Postives = 230/254 (90.55%), Query Frame = 1
BLAST of Cucsa.341340 vs. TAIR10
Match: AT5G14240.1 (AT5G14240.1 Thioredoxin superfamily protein) HSP 1 Score: 396.0 bits (1016), Expect = 1.8e-110 Identity = 179/251 (71.31%), Postives = 221/251 (88.05%), Query Frame = 1
BLAST of Cucsa.341340 vs. TAIR10
Match: AT3G50960.1 (AT3G50960.1 phosducin-like protein 3 homolog) HSP 1 Score: 51.2 bits (121), Expect = 1.1e-06 Identity = 45/182 (24.73%), Postives = 85/182 (46.70%), Query Frame = 1
BLAST of Cucsa.341340 vs. TAIR10
Match: AT5G66410.1 (AT5G66410.1 phosducin-like protein 3 homolog) HSP 1 Score: 49.7 bits (117), Expect = 3.1e-06 Identity = 37/140 (26.43%), Postives = 68/140 (48.57%), Query Frame = 1
BLAST of Cucsa.341340 vs. NCBI nr
Match: gi|449458187|ref|XP_004146829.1| (PREDICTED: phosducin-like protein 3 [Cucumis sativus]) HSP 1 Score: 521.2 bits (1341), Expect = 1.0e-144 Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 1
BLAST of Cucsa.341340 vs. NCBI nr
Match: gi|659119370|ref|XP_008459619.1| (PREDICTED: phosducin-like protein 3 [Cucumis melo]) HSP 1 Score: 506.5 bits (1303), Expect = 2.7e-140 Identity = 246/254 (96.85%), Postives = 251/254 (98.82%), Query Frame = 1
BLAST of Cucsa.341340 vs. NCBI nr
Match: gi|255536977|ref|XP_002509555.1| (PREDICTED: phosducin-like protein 3 [Ricinus communis]) HSP 1 Score: 426.4 bits (1095), Expect = 3.5e-116 Identity = 206/254 (81.10%), Postives = 230/254 (90.55%), Query Frame = 1
BLAST of Cucsa.341340 vs. NCBI nr
Match: gi|703157000|ref|XP_010111613.1| (hypothetical protein L484_017639 [Morus notabilis]) HSP 1 Score: 422.5 bits (1085), Expect = 5.1e-115 Identity = 202/254 (79.53%), Postives = 229/254 (90.16%), Query Frame = 1
BLAST of Cucsa.341340 vs. NCBI nr
Match: gi|225452157|ref|XP_002263692.1| (PREDICTED: phosducin-like protein 3 [Vitis vinifera]) HSP 1 Score: 422.2 bits (1084), Expect = 6.6e-115 Identity = 207/254 (81.50%), Postives = 224/254 (88.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |