Cucsa.340110 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.340110
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	SGF29 tudor-like domain
Location	scaffold03356 : 2615126 .. 2620057 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTAGAAACTTTGAAAAGAGGGCAAAAATAATTTTCAGTTGGAAAGGGAAAAAAAGGGCATTCAATGAGAAACCCATAAGCCCGTTCTTCAGGTTGATTTTCAATTTACATTTTTTTTCTTCTCTTCATTCAACAAATTTGATTATCATCGGTGGAACAAATTCGCAGCTTCCGACACTCAGCAATGTCGTCGATCGACATTGAAGGAATTTTGGGTAGCACGAAAGAGCTCGATCGCCTGCGCAAGGAACAGGAAGTTGTTGTTCTTGAAATCAACAAGATGCATAAGAAACTCCTCGCTAGTGAGTAGTCTTTCATTCTTAAACCTTTTGATTGGATCATGCTTTTTTTTTTTTCCCTTTTGAGATCATGCTCCTAGGAAGTGGCCTAAATGTTCGACTCTTGTTGCTCTGCTGCTTGTTTAATTAGTTTCGTTAGTGGACGAAGAAGATATGGTTGGGTGATAATATTTTGAGAGTTTTGTATTTTGGAATTTTACGGGGGAAGTTACTCGAGTTTGATTTTTTTTAATCTTTTTTTTTTCTTCCTTTTCTGGGAAGAATTGTTGAGTTTATTCAGGAACTGATATTCTGTAATAAGTGTTTGACGAAAAATATGAGGTTTCTGTAAAGTTTGAGCTGGTCTCTGAATGCTATAGGATATGAAAATGTTAAAACCACAATGTTGTTTTGGAGATCTCCGACATTTATATGAAGCTGGAACGTGAGGATGATACCCTCTGCAATTTTAATTGGGTTTGAATTGCTACCTAAAACAAAGAAGTATATAACATTCGGGAGTTTATCAATTTGCTTTCTTTCTGACGCTTTTAGAGTGTTTTATTTTCTATTAGTGCTTGCCATCTAATTTCCGTTAGTAATTGGCTTTCTCCTTAATATTTGGTTGTTTGCAGCTCCTAAAGTGGTTGAGAAGCCTGGGGATAATTCATTGTCAAAACTGAAGCATTTATATACTCAAGCAAAACAACTTTCAGAGGAGGAAGTGAGGTATTTTTTCTTTTTTCTTTTCTTACATTGAAATTCATGGTTCAGAGTTTGTTTACTTGTGGTTTTTTTTTTTTGTCAATTTGTGTGTGATTAGATGCATATAGGTAAAAGATTATTTATTTACCCCAAGTGTGCCTGGATCATAACTATTGTAACTTGCATTAAAGTCCATATTATTTTGTATTGCAGCATTTCCACGGCCTTATTGGGGCAACTTGAAAGTTTGCTCCCCGCTGGACCTACTGGGCCACCAAGGAGAAGGATAGGTGTTTCCAAGAATTATTCATCTATACTGTGTTTTACTGATAACTCCCCCAAAAGCTTTTTGATTCATGCTTTTCATAAATGATAAATTTGAAGATATATTATACGCATGATCATAAAAGGAAACTCAATAATATTTTCTTCTACTTCATTGACTCCTATCGAAGTATTACAACTTGGATTAACCACAGGACATGACTTATGCGTGTTCTCAAAAAAATAATCATAACCAATAGAAGGGTCATGTTAACAAATATCACAATGGATTGATGATAAGGGCCTAAGAGATAATGGGCCCATTCCATGGTGGTCACCTACCAAGGATTTAGTATCTTTCAAGTAGTCTTGACATCCAAACTTTGCAGAGTGAGGCTAGTTGTCACATGAAATTAGTCGAGATGTAGGTAAGGTGTCCTAGACCCTCAAAAATATTAAAAGGAAAAATCACGGTGGAGATGATGGGATTTATGTTGATTTTATTGGAAACTTGAATATGAATACTAGCTATCTTTTCTTTCCTTTGTTATTCCTGAGTTTGAAGCCTTCTGTTTGGATGGTCAATGAATTTCAGCCCTTGAATTAAGTTGGTAAATTACTGTATACCATGTTCCCTTATACTCATGGGCATACTTAAGGTGTCTGAAATAGAAATTTTGAGTTTCTATTCTTGAGGAGACAACTGTATGTCCTGTTCTGCCCATTCTTATTACCAAATGCATGCCAGCGTGTGGGTATGAGTATGTCTACACTTATGGTTGCTGCATATGGATCATAGAAGAAAGGACATTGACTTTTGTATTTGTTTGCTCAATATATTTTCTCACCTTGGAGGCACCACTGGGAAAGGATATTCCAGAATGGCATTAGATTTACTTATAAGACTACTTATGGCTGTCAGATTGAAAACTATCATTAATTCCTTACTATCTTTTCCCTTAGTAGCAAACAATCATTAGTTTATAATTGCTGCCTCTCTTGTTAAAATTTTGAAGAAATGTCATGAAGCAATTATCTGTTGGTTTACTGATTTGAATCTATGTGGCAGAGAAACAGAAAAGAATGAAGGCAGATTCAGACAATGCTCGTAGTTCACCTGCAATGAGAAACCTCGAGGCTTGTGCTAACATGAAAGATGAACAGGTCTGTATGTCATTTTCCAGTTTGTATTTTTTTATTCATATTTTCCAACTTTAAACAGACCGAAAACAATTCAATTGCTTTGATTAATTTCAGTAAAGATAGCTATTTAGTAGCATCTACTATTATATTCAGGTGGCAGCCAGGGTGACTCCAGATGGGGCTGAGAAGGACGAATGGTTTATTGTAAAAGTGATACATTTTGATAAGGAGACAAAACTGTGAGTTAAATTATACTTATAAGTTCTTAACAGCATTTTTTTTTCCTTTTGGGTGGTGGAATTCTTTGTGTGCTGGAAGTTAAGTTGGATTATTATTTTTGTTTGAAAAGAGGATAAAAAAAACTGATTAGTGGGGTATCTTTCATGGAAAACTCAGATCTCATCATGCCCATTTATTGAAGGTCACACATTGGTTGCCTTCTTACACGCTTCAATAAGTGACTAGTGTCTCTGCGCCAGTTTCCCTTAATTGTGGAGTTGGACTTGCAGTTCGATGTTATTAACTTGTGCATATCAGTTGTGCTACTTGCTTTGTCATTCATTATTTTTGACGTATTTGATTATGTGTACAGCTTTGAAATCTGTTTTTAGCATCATTTGTGAAATTTTAGACCTAGTCAAATCATTTAACACATGCTTAATTGTTACAATCTCTCATAGATGATATCCTTTTGAAAAGGATTTTCTTGACATGATATTTCGTTGTTTAATATGTAAAATGTACATGTACAGATTTGAAGTACTAGATGAGGAGCCAGGCGATGAAGATGAAGGTGGAGGGCAAAGGTAACTTTCTGCACAATTAGATAGATTTTTATTTATTTATCATTTCGCTCGGAATGGATTCTAGACCACTAGTTAATTGGAAGTTTCTTCATTCAGTTTGATGCCTAATCAACCAATGTTTAATTCTATCATATTCAGAAAATACAAGTTGCCAATGTCAGCCATCATATCTTTTCCGAAACGAAACGATCCTTCTACTCTCCCTGAATTCCTACCTGGAAGACGAGTCTTGGCAGTTTATCCAGGAACAACTGCTCTTTATAGGGCAACTGTTGTCAATAGTCATCGCAAGGTCATCATCTCATCCCTACACACCATACTATCTCGATTCTCTTGATCTAAATCTAGACTGTGTTAGCATACATCATATTTATTTCTTCTATGTGCAACTTACTGACAAGTAAATTTCTCTTGCAACGAACGACCCCCTTTAAATAACTCTGCATCCTTCCAGAGGAAGACAGACGAGTAAGTACCTCGTATTCTTCTAAGGTTTATCATGTCATTTCTACTTTCTGCTCTGATTGTTACCTCTTTGGTGACTACGGTGTTTTGATTCCTTTAACTTCTCATGTAAAATAGCATCTCTTAGACCCTGACTGGCGACGAAATATGGGGGAAAGTACTGACCTTTTCTGCTCTTCATTTTGATCTCTTACAAAGTATTGATGGATGGGTTCAGTCAGGCTTTCATTAGAAATTATTTCCTTCATGTTAGAACTTGATTGTCCCAAATGCACTATGACCTGATCTGAAGGGGTCATTGTGCAACATGGCCTTTTTGGGTGAACTTGGGACAACTTTAAGAAGTGGAAAAGGTTTTCTTAGTCCATTAAAATCAACTTTTGAAATAAGAAAAAAAATAAAATAAATAAAACTCTGAAATAAGAATCATTTTAAGTAATGCATAGATCTTCAAAACGTGCCTATGAAAGAAATGCTTTCAAGCTATTTTCACGGTTTTCTTTAGTCGTTCGTACATAGCTTCCTATTAAAAATCTCTATTTTAGTTGCCTGTAGGGGTTTGAGGTTTCCCCTTAAAAAAAAGTGTTTCTTATCTTAAAAAAAAAAAAAAACTGAATTTCACTGGACGGTTCAATGTGGTTTGAGTTCTCTGTTTCATGTTTGTTTCCATCAGTTTTGGTGACCAGCGTCCCAATTTCCAATTCGATTATTTTTCATGACGATTCTCCCTGTTAAATAACGCGATCTGTCTGTTCTCGATATATTGACAACATGAATTCCATCTATGTTCTCCAAGAAACTGATAGTAACATGATCTGCTGTACATTTCAAATTCATTCTTACGTTATGTCTGAACAGCTACTTGTTGGAATTCGACGACGATGAGGAAGACGGGTCCTCTACATTGCCCCAGAGAATAGTACCCTTCCATAAGGTGGTGGCCTTGCCTGAAGGACTTCGCCAGTAAGCTCCCTGTGTTGTTTATATTGTGAATAAAATATAAGGTTGTATGTAAATCGTAGACCAAAAAAGAATCCTACTTAATTTGTCTTTGAATTTGAGAGATGATAATGTGTATTGAGTACCTTCACACTTTGCCTCATTAAGCTCTAACAATGGTGAGGAAATTCCATGATACATAATTAAGTATTGGTGGGATCCTTTTTAGTAGTTGGAGGAATCCCAATAATATATCAGTCTTGTGTGGATGTTCTCTAAATTATAACAATAATAACA

mRNA sequence

TCTCTCTAGAAACTTTGAAAAGAGGGCAAAAATAATTTTCAGTTGGAAAGGGAAAAAAAGGGCATTCAATGAGAAACCCATAAGCCCGTTCTTCAGCTTCCGACACTCAGCAATGTCGTCGATCGACATTGAAGGAATTTTGGGTAGCACGAAAGAGCTCGATCGCCTGCGCAAGGAACAGGAAGTTGTTGTTCTTGAAATCAACAAGATGCATAAGAAACTCCTCGCTACTCCTAAAGTGGTTGAGAAGCCTGGGGATAATTCATTGTCAAAACTGAAGCATTTATATACTCAAGCAAAACAACTTTCAGAGGAGGAAGTGAGCATTTCCACGGCCTTATTGGGGCAACTTGAAAGTTTGCTCCCCGCTGGACCTACTGGGCCACCAAGGAGAAGGATAGAGAAACAGAAAAGAATGAAGGCAGATTCAGACAATGCTCGTAGTTCACCTGCAATGAGAAACCTCGAGGCTTGTGCTAACATGAAAGATGAACAGGTGGCAGCCAGGGTGACTCCAGATGGGGCTGAGAAGGACGAATGGTTTATTGTAAAAGTGATACATTTTGATAAGGAGACAAAACTATTTGAAGTACTAGATGAGGAGCCAGGCGATGAAGATGAAGGTGGAGGGCAAAGAAAATACAAGTTGCCAATGTCAGCCATCATATCTTTTCCGAAACGAAACGATCCTTCTACTCTCCCTGAATTCCTACCTGGAAGACGAGTCTTGGCAGTTTATCCAGGAACAACTGCTCTTTATAGGGCAACTGTTGTCAATAGTCATCGCAAGAGGAAGACAGACGACATCTCTTAGACCCTGACTGGCGACGAAATATGGGGGAAACTACTTGTTGGAATTCGACGACGATGAGGAAGACGGGTCCTCTACATTGCCCCAGAGAATAGTACCCTTCCATAAGGTGGTGGCCTTGCCTGAAGGACTTCGCCAGTAAGCTCCCTGTGTTGTTTATATTGTGAATAAAATATAAGGTTGTATGTAAATCGTAGACCAAAAAAGAATCCTACTTAATTTGTCTTTGAATTTGAGAGATGATAATGTGTATTGAGTACCTTCACACTTTGCCTCATTAAGCTCTAACAATGGTGAGGAAATTCCATGATACATAATTAAGTATTGGTGGGATCCTTTTTAGTAGTTGGAGGAATCCCAATAATATATCAGTCTTGTGTGGATGTTCTCTAAATTATAACAATAATAACA

Coding sequence (CDS)

ATGTCGTCGATCGACATTGAAGGAATTTTGGGTAGCACGAAAGAGCTCGATCGCCTGCGCAAGGAACAGGAAGTTGTTGTTCTTGAAATCAACAAGATGCATAAGAAACTCCTCGCTACTCCTAAAGTGGTTGAGAAGCCTGGGGATAATTCATTGTCAAAACTGAAGCATTTATATACTCAAGCAAAACAACTTTCAGAGGAGGAAGTGAGCATTTCCACGGCCTTATTGGGGCAACTTGAAAGTTTGCTCCCCGCTGGACCTACTGGGCCACCAAGGAGAAGGATAGAGAAACAGAAAAGAATGAAGGCAGATTCAGACAATGCTCGTAGTTCACCTGCAATGAGAAACCTCGAGGCTTGTGCTAACATGAAAGATGAACAGGTGGCAGCCAGGGTGACTCCAGATGGGGCTGAGAAGGACGAATGGTTTATTGTAAAAGTGATACATTTTGATAAGGAGACAAAACTATTTGAAGTACTAGATGAGGAGCCAGGCGATGAAGATGAAGGTGGAGGGCAAAGAAAATACAAGTTGCCAATGTCAGCCATCATATCTTTTCCGAAACGAAACGATCCTTCTACTCTCCCTGAATTCCTACCTGGAAGACGAGTCTTGGCAGTTTATCCAGGAACAACTGCTCTTTATAGGGCAACTGTTGTCAATAGTCATCGCAAGAGGAAGACAGACGACATCTCTTAG

Protein sequence

MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYTQAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIEKQKRMKADSDNARSSPAMRNLEACANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLPMSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDIS*

Homology

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BLAST of Cucsa.340110 vs. Swiss-Prot
Match: SGF29_SCHPO (SAGA-associated factor 29 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sgf29 PE=1 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 2.4e-06
Identity = 39/115 (33.91%), Postives = 56/115 (48.70%), Query Frame = 1


Query: 136 DGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLPMSAIISFPKRNDPST 195
           +G +  +  I+KV     + + FEV D EP  +D+G   + YK   + +I  P +  P  
Sbjct: 130 EGGDWIQCIIIKVTGEGAKQR-FEVQDPEP--DDDGNAGQIYKTTANHLIQIPAKGTP-- 189

Query: 196 LPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDEEDGSSTLPQR 251
           LP   P   VLA YP TT  YRA V+   R        L F+ +EE G  T+ +R
Sbjct: 190 LPPISPKTNVLARYPETTTFYRAEVI---RTLPDGSCKLRFEGEEEVGKETVVER 236

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BLAST of Cucsa.340110 vs. TrEMBL
Match: A0A0A0LCH2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G840410 PE=4 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 1.1e-146
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 1


Query: 1   MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT
Sbjct: 68  MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 127

Query: 61  QAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIEKQKRMKADSDNARSSPAMRNLEA 120
           QAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIEKQKRMKADSDNARSSPAMRNLEA
Sbjct: 128 QAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIEKQKRMKADSDNARSSPAMRNLEA 187

Query: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180
           CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP
Sbjct: 188 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 247

Query: 181 MSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE 240
           MSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE
Sbjct: 248 MSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE 307

Query: 241 EDGSSTLPQRIVPFHKVVALPEGLRQ 267
           EDGSSTLPQRIVPFHKVVALPEGLRQ
Sbjct: 308 EDGSSTLPQRIVPFHKVVALPEGLRQ 333

[Close]

BLAST of Cucsa.340110 vs. TrEMBL
Match: A0A067LNG5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10235 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 9.4e-103
Identity = 197/271 (72.69%), Postives = 228/271 (84.13%), Query Frame = 1


Query: 1   MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSS +I GIL +++ELDRLRKEQE V+ EINKMHKKL  TP+VVEKPGDNSLS+LK LYT
Sbjct: 1   MSSPEIAGILENSRELDRLRKEQEEVLSEINKMHKKLQTTPEVVEKPGDNSLSRLKSLYT 60

Query: 61  QAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIE----KQKRMKADSDNARSSPAMR 120
           QAK LSE EV +S  LL QL++LLP+GP G  RRRI+    K+KRMK DSD +R SP+MR
Sbjct: 61  QAKDLSETEVHVSNILLSQLDALLPSGPPGQQRRRIDGSDQKRKRMKTDSDISRLSPSMR 120

Query: 121 N-LEACANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQR 180
           N LEACA++K EQVAARVT + AEKDEWF+VKVI FD+ETK FEVLDEEPGD++EGGGQR
Sbjct: 121 NQLEACASLKGEQVAARVTGNNAEKDEWFVVKVIQFDRETKEFEVLDEEPGDDEEGGGQR 180

Query: 181 KYKLPMSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLE 240
           KYKLPMS II FPK+NDPS+ P+F PGR VLAVYPGTTALY+ATVV+  RKRKT++YLLE
Sbjct: 181 KYKLPMSCIIPFPKKNDPSSAPDFPPGRHVLAVYPGTTALYKATVVSPSRKRKTEEYLLE 240

Query: 241 FDDDEEDGSSTLPQRIVPFHKVVALPEGLRQ 267
           FDDDEEDG+  LPQR VPF+ VV LPEG RQ
Sbjct: 241 FDDDEEDGA--LPQRAVPFYNVVPLPEGHRQ 269

[Close]

BLAST of Cucsa.340110 vs. TrEMBL
Match: A0A078D2T2_BRANA (BnaC07g24360D protein OS=Brassica napus GN=BnaC07g24360D PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 9.4e-103
Identity = 197/270 (72.96%), Postives = 230/270 (85.19%), Query Frame = 1


Query: 2   SSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYTQ 61
           SS DI GIL +TKELDRLRKEQE V++EINKMHKKL ATP+VVEKPGD SLSKLK+LY Q
Sbjct: 3   SSPDIAGILENTKELDRLRKEQEEVLVEINKMHKKLQATPEVVEKPGDTSLSKLKNLYIQ 62

Query: 62  AKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIE----KQKRMKADSDNARSSPAMRN 121
           AK+LSE EV++S  LL QL+SLLP+GPTG  RR++E    K+KRMK +SD  R SP++RN
Sbjct: 63  AKELSESEVTVSNILLTQLDSLLPSGPTGQQRRKLEGNDQKRKRMKVESDVQRVSPSVRN 122

Query: 122 -LEACANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRK 181
            +EA A+++ EQVAARVT D AEKDEWF+VKVIHFD+ETK  EVLDEEPGD++EGGGQR 
Sbjct: 123 QIEAYASLRGEQVAARVTADDAEKDEWFVVKVIHFDRETKEVEVLDEEPGDDEEGGGQRT 182

Query: 182 YKLPMSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEF 241
           YKL MS I+ FPKRNDPST  EFLPG+ VLAVYPGTTALY+ATV+++ RKRK+D+YLLEF
Sbjct: 183 YKLSMSCILPFPKRNDPSTTQEFLPGKPVLAVYPGTTALYKATVISTPRKRKSDEYLLEF 242

Query: 242 DDDEEDGSSTLPQRIVPFHKVVALPEGLRQ 267
           DDDEEDG+  LPQR VPFHKVVALPEG RQ
Sbjct: 243 DDDEEDGA--LPQRTVPFHKVVALPEGHRQ 270

[Close]

BLAST of Cucsa.340110 vs. TrEMBL
Match: Q8RXY6_ARATH (Putative uncharacterized protein At3g27460 OS=Arabidopsis thaliana GN=At3g27460 PE=1 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.6e-102
Identity = 195/270 (72.22%), Postives = 230/270 (85.19%), Query Frame = 1


Query: 2   SSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYTQ 61
           SS DI GIL +TKELDRLRKEQE V++EINKMHKKL ATP++VEKPGD SLSKLK+LY Q
Sbjct: 3   SSPDIAGILDNTKELDRLRKEQEEVLVEINKMHKKLQATPEIVEKPGDISLSKLKNLYIQ 62

Query: 62  AKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIE----KQKRMKADSDNARSSPAMRN 121
           AK+LSE EV++S  LL QL+SLLP+GPTG  RR++E    K+KRMK D+D  R SP+MRN
Sbjct: 63  AKELSESEVTVSNILLTQLDSLLPSGPTGQQRRKLEGNEQKRKRMKVDTDVTRVSPSMRN 122

Query: 122 -LEACANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRK 181
            +EA A++K EQVAARVT + AEKDEWF+VKVIHFD+ETK  EVLDEEPGD++EGGGQR 
Sbjct: 123 QIEAYASLKGEQVAARVTAEDAEKDEWFVVKVIHFDRETKEVEVLDEEPGDDEEGGGQRT 182

Query: 182 YKLPMSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEF 241
           YKL MS I+ FPKRNDPS+  EF+PG+ VLAVYPGTTALY+ATV+++ RKRK+D+YLLEF
Sbjct: 183 YKLSMSCILPFPKRNDPSSTQEFIPGKHVLAVYPGTTALYKATVISTPRKRKSDEYLLEF 242

Query: 242 DDDEEDGSSTLPQRIVPFHKVVALPEGLRQ 267
           DDDEEDG+  LPQR VPFHKVVALPEG RQ
Sbjct: 243 DDDEEDGA--LPQRTVPFHKVVALPEGHRQ 270

[Close]

BLAST of Cucsa.340110 vs. TrEMBL
Match: F4IWI8_ARATH (SGF29 tudor-like domain-containing protein OS=Arabidopsis thaliana GN=At3g27460 PE=1 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 2.7e-102
Identity = 194/269 (72.12%), Postives = 230/269 (85.50%), Query Frame = 1


Query: 2   SSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYTQ 61
           SS DI GIL +TKELDRLRKEQE V++EINKMHKKL ATP++VEKPGD SLSKLK+LY Q
Sbjct: 3   SSPDIAGILDNTKELDRLRKEQEEVLVEINKMHKKLQATPEIVEKPGDISLSKLKNLYIQ 62

Query: 62  AKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRI---EKQKRMKADSDNARSSPAMRN- 121
           AK+LSE EV++S  LL QL+SLLP+GPTG  RR++   +K+KRMK D+D  R SP+MRN 
Sbjct: 63  AKELSESEVTVSNILLTQLDSLLPSGPTGQQRRKLGNEQKRKRMKVDTDVTRVSPSMRNQ 122

Query: 122 LEACANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKY 181
           +EA A++K EQVAARVT + AEKDEWF+VKVIHFD+ETK  EVLDEEPGD++EGGGQR Y
Sbjct: 123 IEAYASLKGEQVAARVTAEDAEKDEWFVVKVIHFDRETKEVEVLDEEPGDDEEGGGQRTY 182

Query: 182 KLPMSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFD 241
           KL MS I+ FPKRNDPS+  EF+PG+ VLAVYPGTTALY+ATV+++ RKRK+D+YLLEFD
Sbjct: 183 KLSMSCILPFPKRNDPSSTQEFIPGKHVLAVYPGTTALYKATVISTPRKRKSDEYLLEFD 242

Query: 242 DDEEDGSSTLPQRIVPFHKVVALPEGLRQ 267
           DDEEDG+  LPQR VPFHKVVALPEG RQ
Sbjct: 243 DDEEDGA--LPQRTVPFHKVVALPEGHRQ 269

[Close]

BLAST of Cucsa.340110 vs. TAIR10
Match: AT3G27460.1 (AT3G27460.1 SGF29 tudor-like domain)

HSP 1 Score: 380.6 bits (976), Expect = 8.2e-106
Identity = 195/270 (72.22%), Postives = 230/270 (85.19%), Query Frame = 1


Query: 2   SSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYTQ 61
           SS DI GIL +TKELDRLRKEQE V++EINKMHKKL ATP++VEKPGD SLSKLK+LY Q
Sbjct: 3   SSPDIAGILDNTKELDRLRKEQEEVLVEINKMHKKLQATPEIVEKPGDISLSKLKNLYIQ 62

Query: 62  AKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIE----KQKRMKADSDNARSSPAMRN 121
           AK+LSE EV++S  LL QL+SLLP+GPTG  RR++E    K+KRMK D+D  R SP+MRN
Sbjct: 63  AKELSESEVTVSNILLTQLDSLLPSGPTGQQRRKLEGNEQKRKRMKVDTDVTRVSPSMRN 122

Query: 122 -LEACANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRK 181
            +EA A++K EQVAARVT + AEKDEWF+VKVIHFD+ETK  EVLDEEPGD++EGGGQR 
Sbjct: 123 QIEAYASLKGEQVAARVTAEDAEKDEWFVVKVIHFDRETKEVEVLDEEPGDDEEGGGQRT 182

Query: 182 YKLPMSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEF 241
           YKL MS I+ FPKRNDPS+  EF+PG+ VLAVYPGTTALY+ATV+++ RKRK+D+YLLEF
Sbjct: 183 YKLSMSCILPFPKRNDPSSTQEFIPGKHVLAVYPGTTALYKATVISTPRKRKSDEYLLEF 242

Query: 242 DDDEEDGSSTLPQRIVPFHKVVALPEGLRQ 267
           DDDEEDG+  LPQR VPFHKVVALPEG RQ
Sbjct: 243 DDDEEDGA--LPQRTVPFHKVVALPEGHRQ 270

[Close]

BLAST of Cucsa.340110 vs. TAIR10
Match: AT5G40550.1 (AT5G40550.1 SGF29 tudor-like domain)

HSP 1 Score: 368.2 bits (944), Expect = 4.2e-102
Identity = 191/275 (69.45%), Postives = 226/275 (82.18%), Query Frame = 1


Query: 1   MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSS DI GIL +TKELDRLRK+QE V++EINKMHKKL A+P++VEKPGD SL+KLK+LY 
Sbjct: 1   MSSPDIVGILENTKELDRLRKDQEEVLVEINKMHKKLQASPEIVEKPGDISLAKLKNLYI 60

Query: 61  QAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRI--------EKQKRMKADSDNARSS 120
           QAK+LSE EV++S  LL QL+ LLP GPTG  RR++        +K+KRMK DSD  R S
Sbjct: 61  QAKELSENEVTVSNILLTQLDLLLPYGPTGQQRRKLGVVAEGNDQKRKRMKVDSDVIRLS 120

Query: 121 PAMRN-LEACANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEG 180
           P+MRN +EA A++K EQVAARVT + A+KDEWF+VKVIHFD+ETK  EVLDEEPGD++EG
Sbjct: 121 PSMRNQIEAYASLKGEQVAARVTAESADKDEWFVVKVIHFDRETKEVEVLDEEPGDDEEG 180

Query: 181 GGQRKYKLPMSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDD 240
            GQR YKLPM  I+ FPKRNDPS   EF PG+ VLAVYPGTTALY+ATVV++ RKRK+D+
Sbjct: 181 SGQRTYKLPMLCILPFPKRNDPSNTQEFPPGKHVLAVYPGTTALYKATVVSTPRKRKSDE 240

Query: 241 YLLEFDDDEEDGSSTLPQRIVPFHKVVALPEGLRQ 267
           YLLEFDDDEEDG+  LPQR VPFHKVVALPEG RQ
Sbjct: 241 YLLEFDDDEEDGA--LPQRTVPFHKVVALPEGHRQ 273

[Close]

BLAST of Cucsa.340110 vs. NCBI nr
Match: gi|449446712|ref|XP_004141115.1| (PREDICTED: uncharacterized protein LOC101220042 isoform X1 [Cucumis sativus])

HSP 1 Score: 527.3 bits (1357), Expect = 1.5e-146
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 1


Query: 1   MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT
Sbjct: 1   MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60

Query: 61  QAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIEKQKRMKADSDNARSSPAMRNLEA 120
           QAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIEKQKRMKADSDNARSSPAMRNLEA
Sbjct: 61  QAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIEKQKRMKADSDNARSSPAMRNLEA 120

Query: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180
           CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP
Sbjct: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180

Query: 181 MSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE 240
           MSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE
Sbjct: 181 MSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE 240

Query: 241 EDGSSTLPQRIVPFHKVVALPEGLRQ 267
           EDGSSTLPQRIVPFHKVVALPEGLRQ
Sbjct: 241 EDGSSTLPQRIVPFHKVVALPEGLRQ 266

[Close]

BLAST of Cucsa.340110 vs. NCBI nr
Match: gi|700204582|gb|KGN59715.1| (hypothetical protein Csa_3G840410 [Cucumis sativus])

HSP 1 Score: 527.3 bits (1357), Expect = 1.5e-146
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 1


Query: 1   MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT
Sbjct: 68  MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 127

Query: 61  QAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIEKQKRMKADSDNARSSPAMRNLEA 120
           QAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIEKQKRMKADSDNARSSPAMRNLEA
Sbjct: 128 QAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIEKQKRMKADSDNARSSPAMRNLEA 187

Query: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180
           CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP
Sbjct: 188 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 247

Query: 181 MSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE 240
           MSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE
Sbjct: 248 MSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE 307

Query: 241 EDGSSTLPQRIVPFHKVVALPEGLRQ 267
           EDGSSTLPQRIVPFHKVVALPEGLRQ
Sbjct: 308 EDGSSTLPQRIVPFHKVVALPEGLRQ 333

[Close]

BLAST of Cucsa.340110 vs. NCBI nr
Match: gi|659129961|ref|XP_008464931.1| (PREDICTED: SAGA-associated factor 29 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 483.8 bits (1244), Expect = 1.9e-133
Identity = 247/266 (92.86%), Postives = 255/266 (95.86%), Query Frame = 1


Query: 1   MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSS DI+GILG+TKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT
Sbjct: 1   MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60

Query: 61  QAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIEKQKRMKADSDNARSSPAMRNLEA 120
           QAKQLSE+EVS+ST LLGQLE+LLP GP    +RR   +KRMKADSDNARSSPAMRNLEA
Sbjct: 61  QAKQLSEDEVSVSTTLLGQLETLLP-GPV--QQRRKIDKKRMKADSDNARSSPAMRNLEA 120

Query: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180
           CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP
Sbjct: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180

Query: 181 MSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE 240
           MSAIISFPKRNDPST+PEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE
Sbjct: 181 MSAIISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRKRKTDDYLLEFDDDE 240

Query: 241 EDGSSTLPQRIVPFHKVVALPEGLRQ 267
           EDGSSTLPQR VPFHKVVALPEGLRQ
Sbjct: 241 EDGSSTLPQRTVPFHKVVALPEGLRQ 263

[Close]

BLAST of Cucsa.340110 vs. NCBI nr
Match: gi|778685936|ref|XP_011652305.1| (PREDICTED: uncharacterized protein LOC101220042 isoform X2 [Cucumis sativus])

HSP 1 Score: 446.8 bits (1148), Expect = 2.6e-122
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 1


Query: 1   MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT
Sbjct: 1   MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60

Query: 61  QAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIEKQKRMKADSDNARSSPAMRNLEA 120
           QAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIEKQKRMKADSDNARSSPAMRNLEA
Sbjct: 61  QAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIEKQKRMKADSDNARSSPAMRNLEA 120

Query: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180
           CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP
Sbjct: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180

Query: 181 MSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRK 227
           MSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRK
Sbjct: 181 MSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRK 226

[Close]

BLAST of Cucsa.340110 vs. NCBI nr
Match: gi|659129965|ref|XP_008464933.1| (PREDICTED: SAGA-associated factor 29 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 405.2 bits (1040), Expect = 8.8e-110
Identity = 208/226 (92.04%), Postives = 216/226 (95.58%), Query Frame = 1


Query: 1   MSSIDIEGILGSTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60
           MSS DI+GILG+TKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT
Sbjct: 1   MSSFDIDGILGNTKELDRLRKEQEVVVLEINKMHKKLLATPKVVEKPGDNSLSKLKHLYT 60

Query: 61  QAKQLSEEEVSISTALLGQLESLLPAGPTGPPRRRIEKQKRMKADSDNARSSPAMRNLEA 120
           QAKQLSE+EVS+ST LLGQLE+LLP GP    +RR   +KRMKADSDNARSSPAMRNLEA
Sbjct: 61  QAKQLSEDEVSVSTTLLGQLETLLP-GPV--QQRRKIDKKRMKADSDNARSSPAMRNLEA 120

Query: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180
           CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP
Sbjct: 121 CANMKDEQVAARVTPDGAEKDEWFIVKVIHFDKETKLFEVLDEEPGDEDEGGGQRKYKLP 180

Query: 181 MSAIISFPKRNDPSTLPEFLPGRRVLAVYPGTTALYRATVVNSHRK 227
           MSAIISFPKRNDPST+PEFLPGRRVLAVYPGTTALYRATVVNSHRK
Sbjct: 181 MSAIISFPKRNDPSTVPEFLPGRRVLAVYPGTTALYRATVVNSHRK 223

The following BLAST results are available for this feature:

BLAST of Cucsa.340110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SGF29_SCHPO	2.4e-06	33.91	SAGA-associated factor 29 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)...	[more]

BLAST of Cucsa.340110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCH2_CUCSA	1.1e-146	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G840410 PE=4 SV=1	[more]
A0A067LNG5_JATCU	9.4e-103	72.69	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10235 PE=4 SV=1	[more]
A0A078D2T2_BRANA	9.4e-103	72.96	BnaC07g24360D protein OS=Brassica napus GN=BnaC07g24360D PE=4 SV=1	[more]
Q8RXY6_ARATH	1.6e-102	72.22	Putative uncharacterized protein At3g27460 OS=Arabidopsis thaliana GN=At3g27460 ...	[more]
F4IWI8_ARATH	2.7e-102	72.12	SGF29 tudor-like domain-containing protein OS=Arabidopsis thaliana GN=At3g27460 ...	[more]

BLAST of Cucsa.340110 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G27460.1	8.2e-106	72.22	SGF29 tudor-like domain	[more]
AT5G40550.1	4.2e-102	69.45	SGF29 tudor-like domain	[more]

BLAST of Cucsa.340110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446712\|ref\|XP_004141115.1\|	1.5e-146	100.00	PREDICTED: uncharacterized protein LOC101220042 isoform X1 [Cucumis sativus]	[more]
gi\|700204582\|gb\|KGN59715.1\|	1.5e-146	100.00	hypothetical protein Csa_3G840410 [Cucumis sativus]	[more]
gi\|659129961\|ref\|XP_008464931.1\|	1.9e-133	92.86	PREDICTED: SAGA-associated factor 29 homolog isoform X1 [Cucumis melo]	[more]
gi\|778685936\|ref\|XP_011652305.1\|	2.6e-122	100.00	PREDICTED: uncharacterized protein LOC101220042 isoform X2 [Cucumis sativus]	[more]
gi\|659129965\|ref\|XP_008464933.1\|	8.8e-110	92.04	PREDICTED: SAGA-associated factor 29 homolog isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010750	SGF29_tudor-like_dom
IPR010750	SGF29_tudor-like_dom
IPR010750	SGF29_tudor-like_dom
IPR010750	SGF29_tudor-like_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009651	response to salt stress
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000124	SAGA complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.340110.6	Cucsa.340110.6	mRNA
Cucsa.340110.5	Cucsa.340110.5	mRNA
Cucsa.340110.4	Cucsa.340110.4	mRNA
Cucsa.340110.1	Cucsa.340110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010750	SGF29 tudor-like domain	PFAM	PF07039	DUF1325	coord: 126..228 score: 4.9
IPR010750	SGF29 tudor-like domain	PROFILE	PS51518	SGF29_C	coord: 119..233 score: 29
None	No IPR available	PANTHER	PTHR21539	UNCHARACTERIZED	coord: 9..230 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.340110	Cla017132	Watermelon (97103) v1	cgywmB609
Cucsa.340110	Csa3G840410	Cucumber (Chinese Long) v2	cgycuB478
Cucsa.340110	MELO3C026589	Melon (DHL92) v3.5.1	cgymeB558
Cucsa.340110	ClCG10G013770	Watermelon (Charleston Gray)	cgywcgB579
Cucsa.340110	CSPI03G40360	Wild cucumber (PI 183967)	cgycpiB504
Cucsa.340110	CmaCh11G014610	Cucurbita maxima (Rimu)	cgycmaB0922
Cucsa.340110	CmaCh14G006770	Cucurbita maxima (Rimu)	cgycmaB0926
Cucsa.340110	CmoCh11G016560	Cucurbita moschata (Rifu)	cgycmoB0923
Cucsa.340110	CmoCh14G006950	Cucurbita moschata (Rifu)	cgycmoB0926
Cucsa.340110	Lsi03G013440	Bottle gourd (USVL1VR-Ls)	cgylsiB551
Cucsa.340110	Cp4.1LG03g07280	Cucurbita pepo (Zucchini)	cgycpeB0888
Cucsa.340110	Cp4.1LG04g05580	Cucurbita pepo (Zucchini)	cgycpeB0894
Cucsa.340110	MELO3C026589.2	Melon (DHL92) v3.6.1	cgymedB559
Cucsa.340110	CsaV3_3G042890	Cucumber (Chinese Long) v3	cgycucB523
Cucsa.340110	Cla97C10G196550	Watermelon (97103) v2	cgywmbB582
Cucsa.340110	Bhi11G001348	Wax gourd	cgywgoB676
Cucsa.340110	Carg15601	Silver-seed gourd	carcgyB0429
Cucsa.340110	Carg09702	Silver-seed gourd	carcgyB0506

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.340110	Silver-seed gourd	carcgyB0320
Cucsa.340110	Silver-seed gourd	carcgyB0770
Cucsa.340110	Cucumber (Chinese Long) v3	cgycucB524
Cucsa.340110	Watermelon (97103) v2	cgywmbB591
Cucsa.340110	Wax gourd	cgywgoB679
Cucsa.340110	Cucumber (Gy14) v1	cgycgyB111
Cucsa.340110	Cucurbita maxima (Rimu)	cgycmaB0931
Cucsa.340110	Cucurbita maxima (Rimu)	cgycmaB0939
Cucsa.340110	Cucurbita moschata (Rifu)	cgycmoB0939
Cucsa.340110	Wild cucumber (PI 183967)	cgycpiB506
Cucsa.340110	Cucumber (Chinese Long) v2	cgycuB475
Cucsa.340110	Cucumber (Chinese Long) v2	cgycuB480
Cucsa.340110	Melon (DHL92) v3.5.1	cgymeB549
Cucsa.340110	Melon (DHL92) v3.5.1	cgymeB554
Cucsa.340110	Watermelon (Charleston Gray)	cgywcgB577
Cucsa.340110	Watermelon (Charleston Gray)	cgywcgB587
Cucsa.340110	Watermelon (97103) v1	cgywmB607
Cucsa.340110	Bottle gourd (USVL1VR-Ls)	cgylsiB549