Cucsa.339490 (gene) Cucumber (Gy14) v1

NameCucsa.339490
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
Descriptionnodulin MtN21 /EamA-like transporter family protein
Locationscaffold03356 : 2096500 .. 2096696 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAAGAATTTGTGCCATTCGCCGCCATGGTTGCCGCGGAGTGCGCCACCGTTGGCTCCAACACCGGTTTCAAAGCCGCCACAGCTCTAGGCCTCAGCTACTATGTCTTCACACCCTCTACGTTTGCGTCGTCGCTGTCGCTGCCACCGCCCTCATCCCTTTCGCCTTCTTCTTCCATAAGTAACTACTCCCCTTGA

mRNA sequence

ACAAAGAATTTGTGCCATTCGCCGCCATGGTTGCCGCGGAGTGCGCCACCGTTGGCTCCAACACCGGTTTCAAAGCCGCCACAGCTCTAGGCCTCAGCTACTATGTCTTCACACCCTCTACGTTTGCGTCGTCGCTGTCGCTGCCACCGCCCTCATCCCTTTCGCCTTCTTCTTCCATAAGTAACTACTCCCCTTGA

Coding sequence (CDS)

ATGGTTGCCGCGGAGTGCGCCACCGTTGGCTCCAACACCGGTTTCAAAGCCGCCACAGCTCTAGGCCTCAGCTACTATGTCTTCACACCCTCTACGTTTGCGTCGTCGCTGTCGCTGCCACCGCCCTCATCCCTTTCGCCTTCTTCTTCCATAAGTAACTACTCCCCTTGA

Protein sequence

MVAAECATVGSNTGFKAATALGLSYYVFTPSTFASSLSLPPPSSLSPSSSISNYSP*
BLAST of Cucsa.339490 vs. TAIR10
Match: AT5G40230.1 (AT5G40230.1 nodulin MtN21 /EamA-like transporter family protein)

HSP 1 Score: 48.5 bits (114), Expect = 1.6e-06
Identity = 26/45 (57.78%), Postives = 30/45 (66.67%), Query Frame = 1

Query: 1  MVAAECATVGSNTGFKAATALGLSYYVFTPSTFASSLSLPPPSSL 46
          MVA EC TVGSNT FKAAT  GLS+YVF   T+  +  +  P SL
Sbjct: 25 MVAVECVTVGSNTLFKAATLRGLSFYVFVFYTYVVATLVLLPLSL 69

BLAST of Cucsa.339490 vs. TAIR10
Match: AT5G40240.2 (AT5G40240.2 nodulin MtN21 /EamA-like transporter family protein)

HSP 1 Score: 47.4 bits (111), Expect = 3.5e-06
Identity = 26/45 (57.78%), Postives = 30/45 (66.67%), Query Frame = 1

Query: 1  MVAAECATVGSNTGFKAATALGLSYYVFTPSTFASSLSLPPPSSL 46
          M A ECATVGSNT FKAAT  GLS+YVF   ++  S  L  P S+
Sbjct: 38 MFAVECATVGSNTLFKAATLRGLSFYVFVFYSYIVSTLLLLPLSV 82

BLAST of Cucsa.339490 vs. NCBI nr
Match: gi|659085556|ref|XP_008443483.1| (PREDICTED: WAT1-related protein At4g15540-like isoform X2 [Cucumis melo])

HSP 1 Score: 58.5 bits (140), Expect = 4.3e-06
Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1

Query: 1  MVAAECATVGSNTGFKAATALGLSYYVFT 30
          MVAAECATVGSNTGFKAATA GLSYYVFT
Sbjct: 16 MVAAECATVGSNTGFKAATARGLSYYVFT 44

BLAST of Cucsa.339490 vs. NCBI nr
Match: gi|659085554|ref|XP_008443482.1| (PREDICTED: WAT1-related protein At4g15540-like isoform X1 [Cucumis melo])

HSP 1 Score: 58.5 bits (140), Expect = 4.3e-06
Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1

Query: 1  MVAAECATVGSNTGFKAATALGLSYYVFT 30
          MVAAECATVGSNTGFKAATA GLSYYVFT
Sbjct: 17 MVAAECATVGSNTGFKAATARGLSYYVFT 45

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT5G40230.11.6e-0657.78 nodulin MtN21 /EamA-like transporter family protein[more]
AT5G40240.23.5e-0657.78 nodulin MtN21 /EamA-like transporter family protein[more]
Match NameE-valueIdentityDescription
gi|659085556|ref|XP_008443483.1|4.3e-0696.55PREDICTED: WAT1-related protein At4g15540-like isoform X2 [Cucumis melo][more]
gi|659085554|ref|XP_008443482.1|4.3e-0696.55PREDICTED: WAT1-related protein At4g15540-like isoform X1 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0022857 transmembrane transporter activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.339490.1Cucsa.339490.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.339490Bhi11G002576Wax gourdcgywgoB673
Cucsa.339490Carg05680Silver-seed gourdcarcgyB1140
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.339490Cucumber (Gy14) v1cgycgyB115
Cucsa.339490Cucumber (Gy14) v1cgycgyB138
Cucsa.339490Cucurbita maxima (Rimu)cgycmaB0922
Cucsa.339490Cucurbita maxima (Rimu)cgycmaB0926
Cucsa.339490Cucurbita maxima (Rimu)cgycmaB0939
Cucsa.339490Cucurbita moschata (Rifu)cgycmoB0923
Cucsa.339490Cucurbita moschata (Rifu)cgycmoB0926
Cucsa.339490Cucurbita moschata (Rifu)cgycmoB0939
Cucsa.339490Wild cucumber (PI 183967)cgycpiB501
Cucsa.339490Wild cucumber (PI 183967)cgycpiB504
Cucsa.339490Wild cucumber (PI 183967)cgycpiB509
Cucsa.339490Cucumber (Chinese Long) v2cgycuB475
Cucsa.339490Cucumber (Chinese Long) v2cgycuB478
Cucsa.339490Cucumber (Chinese Long) v2cgycuB483
Cucsa.339490Melon (DHL92) v3.5.1cgymeB549
Cucsa.339490Melon (DHL92) v3.5.1cgymeB552
Cucsa.339490Melon (DHL92) v3.5.1cgymeB554
Cucsa.339490Melon (DHL92) v3.5.1cgymeB558
Cucsa.339490Watermelon (Charleston Gray)cgywcgB577
Cucsa.339490Watermelon (Charleston Gray)cgywcgB579
Cucsa.339490Watermelon (Charleston Gray)cgywcgB584
Cucsa.339490Watermelon (Charleston Gray)cgywcgB587
Cucsa.339490Watermelon (97103) v1cgywmB607
Cucsa.339490Watermelon (97103) v1cgywmB609
Cucsa.339490Watermelon (97103) v1cgywmB614
Cucsa.339490Watermelon (97103) v1cgywmB620
Cucsa.339490Cucurbita pepo (Zucchini)cgycpeB0888
Cucsa.339490Cucurbita pepo (Zucchini)cgycpeB0894
Cucsa.339490Bottle gourd (USVL1VR-Ls)cgylsiB549
Cucsa.339490Bottle gourd (USVL1VR-Ls)cgylsiB551
Cucsa.339490Bottle gourd (USVL1VR-Ls)cgylsiB554
Cucsa.339490Bottle gourd (USVL1VR-Ls)cgylsiB555
Cucsa.339490Melon (DHL92) v3.6.1cgymedB550
Cucsa.339490Melon (DHL92) v3.6.1cgymedB555
Cucsa.339490Melon (DHL92) v3.6.1cgymedB559
Cucsa.339490Silver-seed gourdcarcgyB0506
Cucsa.339490Cucumber (Chinese Long) v3cgycucB518
Cucsa.339490Cucumber (Chinese Long) v3cgycucB520
Cucsa.339490Cucumber (Chinese Long) v3cgycucB523
Cucsa.339490Watermelon (97103) v2cgywmbB582
Cucsa.339490Watermelon (97103) v2cgywmbB587
Cucsa.339490Watermelon (97103) v2cgywmbB591
Cucsa.339490Wax gourdcgywgoB679
Cucsa.339490Wax gourdcgywgoB693