Cucsa.338930 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTAATAGTATTTATTTTAATTTTTCAATTGGTCCCCAGCCACACTACACACTATACCGATTAATTTCGCTGCCTATAAGATATTTCCTTCCCTTCCCTTCCTTCAAAAaTAAAACCATCTTACCTAAAATATTCAAACAAATAAATCACTCCCAATTTTTCAAATTCCCTAAAAAAAAaTGGCGAGACGCAGCGACGATGAAGAAGCCTTTATTGCCTTGGGAAACGAGTGCTCTGATCCTCAACCACCCTTGTTCCGCGACCGATTTGATGAACTTTACCCGCCCGAGTTCTCACGAAAGGTATGGATTTCTAGTTAATTTTGTTCTTGGTTGAATTTGAAGCGATTGGTTTGTGATCGGAGGAATTTTTGTGGTGGTTTAGCTTGTGGCGGAGGTGATCGCTACGTATTTGCTTGTGTTTGTGTCGTGTGGTGTGGCGGCATTGAGTGGGAGTGATGAACCGGTAGTGACGAAGCTTGGAGCTTCAATTACCTGTGGATTGATTGTGACGGTGATGATTTACTCCGTCGGACATATCTCCGGCGCTCATATGAATCCAGCGGTTACTATTGCTTTTGCTGCTGTTCGGCGATTTCCATGGAGACAGGTCCTCTTCTTCTTCCTCCTCTGTTTTTCTCCCCAATTTTTATGCCAATTTACCATATTATCCTTTCGCTTTTTCATTTGTTATTTTTATGTTTTCTACAGATATTTTCTATTTTGAGAAAAGCCGTGCCAAATATTTAATTCACTTTTTTGCCTTTTTTTTtCTTCTTTTTTtAAGTTTTGATATTTAGTTTAAGAGTGGAAACCTATACTTAAAAAAGTTTCGAAATATTACATTTGTACCATTTAATTTTTTATCATGTTATTTATTTTTAATTCTTTTATTTtAAaTTTAGTTTTCATTTACTCCCTACATTTCAATATTTAGTTTCAATTTTtGTTTGTTAATAGCACTGCTTGTTTTGTTATTCATACTTCAATAATTAAGTTCAAATGATTCTATCATAATTTTTTTtACTTATAATTAATTAATTAATTTTTAGATATTAAAATTGATGTTGAGTATTTAAACCATATAAAATTCAAAAATCATGCTACATTTTCATGACTTAAAATACAGGAATTAAAAAGTTCCTTTTTTTTTtCTAAATGTAAAAAGAAAAAAAAAaGTTTTTCTTTCTTTCTTTTCAACATTAAAAGCATGCTTAGATATTGGTGGTTGAGTTGATAAGTGTACTGAGAATAGATGTGTATTAGGTAATATAATAAAAATGtCCAATAAAAAGACAAAACAATGTCTCCTTTCTTTTAACATTTAGAAAACAAAATCAAATTTATCATTATTTTTTTCAAGTTTACTAAATTAAAATTAGTAGAATTCTTATTTTAACTTTGGTACAAAaTATTTGAACAATTATACACCGACAAATAATCACCCTGAATCTAGAGCTTTGGATTTCTAGTGCACTCTCTCATTTTCGAAAAaTAAAATAAAATTATCAATATATTCTCTCTCTCTtCTTTTTTTTTtCTTTtCAGAATACATACTCTTTTTTGCTCTATTTCACTCTTTTTTAAAAAaTTTAAAAaTTAAGAATATATACTCTTTTtCTTTTtCTTTTTTAGATTATATACTATCTTAATCTCTCTTTTTTTtCTGAAACTGTATTAAAAATTAAGATTATATATACTCTCTTACTTtTTTTTtATTTAAGAATTATAATCTCTTACTTAAGAATTAAGAAAAAGGAACCCCCAATCAAATCAACAGTGATGGTGATATATATTATAAATGTCTATTTTATTGGACGGGCGGAAATTAATTATAATTTTtTtAAAATTGGAAATTTAGTGGTAATGATGTATGAGCTGCGCCACTTCATCAAAAAGAACAGTAAAAAaTTATAAAAAAaGGGATGGAAAAGTGCAATTTATGCCACCTGAGAAGTGACGTGGATGAAGTGTACGGAAGATATTTCGATAAGTGTCCCCACCAGTTTGGCAGATATTATATATAAAAAGACTATTGGCAGATACTTTCTAAGGAAAGCAGCCTTAATTGCTTTTTAATTCACCAAAAGTCATCTTAATTGAGAATATGCTTTTCCATCTTTTCCAGTTTAGACCTTTCAAACCTTTTTtCTTTTTAACTCTTTTTCTATTTTATTTTCATATATATTTTTtACATGACTTAGTAATAATTGATGTATACTCTTATGGTTCGTGAATTGAATTTTATGCGGTTGATGCAGGTTCCACTTTATGCAGCAGCTCAATTAAGTGGAGCTACGTCTGCAGCCTTCACACTACGCATATTAATGGATCCAATTCAAGATTTAGGTACTACTTCACCACATGGACCGGCTTTGAAAGCACTTGTTATGGAGATTGTTGTCTCATTTTGTATGATGTTTGTCACTTCTGCGGTTGCCACCGACACCAAAGCTGTAAGAGCATCTTATTGTTGTTTACCTCTTACTCACAATCTTCTCTTAATTtCCTTTCGCTAAGGTTCACTGCTTTTTtATATGTAATTTTTGGCAGATAGGAGAGCTTGGAGGCGTAGCTGTGGGGTCAGCTGTATGTATCTCGTCCATCTTTGCTGGGTAAGCAAAGCAATTATAATTGTTTCTtTTTTTGGCTTTTTGTTCTTAGCTGGAAGTTTTGTGGGTATCTGGAAAAATCTTAAACAAGATTTTGTTTTGATTGAATTCCAAATTTGGACCCTATAGTTTGGAGAAAATTTGTTTATTTATGAGATTTTATCAAACTATAAAGCTGGGGTTAACTATGTGTAGGCCAATATCGGGTGGATCGATGAACCCAGCAAGATCAATAGGACCAGCCATTGCAAGTTCACGTTACGAAGGAATTTGGGTGTACATGATCGGTCCAGTTACAGGAACCTTGCTTGCATCATTTTCATATAATTTCATACGAGCCACTGAAAAACACACCCATTCACTCTCGTTACATTGACATCCAATCGATGGGATCATGCAGCTGGAACTTCAAGTCATACCAAAATCAACTAGTTCAATTATTGTATAAATTAATGTGTAGCTCCTATAATAAAAGTTGTAGTTTAAGTTGTAGCTTTAGAAAAACTTAAGGTAAGGTTAGCTTTAATTGTCTTGCAATTTATTTGTTTTTTtAGTTTCGAGAGAAGAATGAATCTGAAATAGAGATTCATTTTTCTTTTTATTACTCTTGTTATTTTACAAGTGTGAGTTTTGATCTGATTTTTTTtACAATAATCAATCATAAAATTGGTTCTTCTTTTCAAGTTAA atttaatagtatttattttaatttttCAATTGGTCCCCAGCCACACTACACACTATACCGATTAATTTCGCTGCCTATAAGATATTTCCTTCCCTTCCCTTCCTTCAAAAATAAAACCATCTTACCTAAAATATTCAAACAAATAAATCACTCCCAATTTTTCAAATTCCCTAAAAAAAAATGGCGAGACGCAGCGACGATGAAGAAGCCTTTATTGCCTTGGGAAACGAGTGCTCTGATCCTCAACCACCCTTGTTCCGCGACCGATTTGATGAACTTTACCCGCCCGAGTTCTCACGAAAGCTTGTGGCGGAGGTGATCGCTACGTATTTGCTTGTGTTTGTGTCGTGTGGTGTGGCGGCATTGAGTGGGAGTGATGAACCGGTAGTGACGAAGCTTGGAGCTTCAATTACCTGTGGATTGATTGTGACGGTGATGATTTACTCCGTCGGACATATCTCCGGCGCTCATATGAATCCAGCGGTTACTATTGCTTTTGCTGCTGTTCGGCGATTTCCATGGAGACAGGTTCCACTTTATGCAGCAGCTCAATTAAGTGGAGCTACGTCTGCAGCCTTCACACTACGCATATTAATGGATCCAATTCAAGATTTAGGTACTACTTCACCACATGGACCGGCTTTGAAAGCACTTGTTATGGAGATTGTTGTCTCATTTTGTATGATGTTTGTCACTTCTGCGGTTGCCACCGACACCAAAGCTATAGGAGAGCTTGGAGGCGTAGCTGTGGGGTCAGCTGTATGTATCTCGTCCATCTTTGCTGGGCCAATATCGGGTGGATCGATGAACCCAGCAAGATCAATAGGACCAGCCATTGCAAGTTCACGTTACGAAGGAATTTGGGTGTACATGATCGGTCCAGTTACAGGAACCTTGCTTGCATCATTTTCATATAATTTCATACGAGCCACTGAAAAACACACCCATTCACTCTCGTTACATTGACATCCAATCGATGGGATCATGCAGCTGGAACTTCAAGTCATACCAAAATCAACTAGTTCAATTATTGTATAAATTAATGTGTAGCTCCTATAATAAAAGTTGTAGTTTAAGTTGTAGCTTTAGAAAAACTTAAGGTAAGGTTAGCTTTAATTGTCTTGCAATTTATTTGTTTTTTTAGTTTCGAGAGAAGAATGAATCTGAAATAGAGATTCATTTTTCTTTTTATTACTCTTGTTATTTTACAAGTGTGAGTTTTGATCTGATTTTTTTTACAATAATCAATCATAAAATTGGTTCTTCTTTTCAAGTTAA aTGGCGAGACGCAGCGACGATGAAGAAGCCTTTATTGCCTTGGGAAACGAGTGCTCTGATCCTCAACCACCCTTGTTCCGCGACCGATTTGATGAACTTTACCCGCCCGAGTTCTCACGAAAGCTTGTGGCGGAGGTGATCGCTACGTATTTGCTTGTGTTTGTGTCGTGTGGTGTGGCGGCATTGAGTGGGAGTGATGAACCGGTAGTGACGAAGCTTGGAGCTTCAATTACCTGTGGATTGATTGTGACGGTGATGATTTACTCCGTCGGACATATCTCCGGCGCTCATATGAATCCAGCGGTTACTATTGCTTTTGCTGCTGTTCGGCGATTTCCATGGAGACAGGTTCCACTTTATGCAGCAGCTCAATTAAGTGGAGCTACGTCTGCAGCCTTCACACTACGCATATTAATGGATCCAATTCAAGATTTAGGTACTACTTCACCACATGGACCGGCTTTGAAAGCACTTGTTATGGAGATTGTTGTCTCATTTTGTATGATGTTTGTCACTTCTGCGGTTGCCACCGACACCAAAGCTATAGGAGAGCTTGGAGGCGTAGCTGTGGGGTCAGCTGTATGTATCTCGTCCATCTTTGCTGGGCCAATATCGGGTGGATCGATGAACCCAGCAAGATCAATAGGACCAGCCATTGCAAGTTCACGTTACGAAGGAATTTGGGTGTACATGATCGGTCCAGTTACAGGAACCTTGCTTGCATCATTTTCATATAATTTCATACGAGCCACTGAAAAACACACCCATTCACTCTCGTTACATTGA MARRSDDEEAFIALGNECSDPQPPLFRDRFDELYPPEFSRKLVAEVIATYLLVFVSCGVAALSGSDEPVVTKLGASITCGLIVTVMIYSVGHISGAHMNPAVTIAFAAVRRFPWRQVPLYAAAQLSGATSAAFTLRILMDPIQDLGTTSPHGPALKALVMEIVVSFCMMFVTSAVATDTKAIGELGGVAVGSAVCISSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYMIGPVTGTLLASFSYNFIRATEKHTHSLSLH*
BLAST of Cucsa.338930 vs. Swiss-Prot
Match: NIP21_MAIZE (Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2) HSP 1 Score: 293.1 bits (749), Expect = 3.0e-78 Identity = 140/244 (57.38%), Postives = 189/244 (77.46%), Query Frame = 1
BLAST of Cucsa.338930 vs. Swiss-Prot
Match: NIP21_ORYSJ (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica GN=NIP2-1 PE=1 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 2.8e-76 Identity = 134/218 (61.47%), Postives = 179/218 (82.11%), Query Frame = 1
BLAST of Cucsa.338930 vs. Swiss-Prot
Match: NIP22_ORYSJ (Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica GN=NIP2-2 PE=2 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 4.8e-76 Identity = 136/223 (60.99%), Postives = 178/223 (79.82%), Query Frame = 1
BLAST of Cucsa.338930 vs. Swiss-Prot
Match: NIP23_MAIZE (Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 6.9e-75 Identity = 131/221 (59.28%), Postives = 175/221 (79.19%), Query Frame = 1
BLAST of Cucsa.338930 vs. Swiss-Prot
Match: NIP22_MAIZE (Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 9.0e-75 Identity = 135/232 (58.19%), Postives = 180/232 (77.59%), Query Frame = 1
BLAST of Cucsa.338930 vs. TrEMBL
Match: A0A0A0LHR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G826650 PE=3 SV=1) HSP 1 Score: 515.8 bits (1327), Expect = 3.1e-143 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 1
BLAST of Cucsa.338930 vs. TrEMBL
Match: G8XUV4_CUCSA (Si transport-like protein 2 OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 514.2 bits (1323), Expect = 9.2e-143 Identity = 260/261 (99.62%), Postives = 260/261 (99.62%), Query Frame = 1
BLAST of Cucsa.338930 vs. TrEMBL
Match: Q7X9T0_CUCPE (Nod26-like protein OS=Cucurbita pepo GN=NIP1 PE=2 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 2.3e-93 Identity = 177/255 (69.41%), Postives = 209/255 (81.96%), Query Frame = 1
BLAST of Cucsa.338930 vs. TrEMBL
Match: F1SX50_CUCMO (Silicon transporter 1 OS=Cucurbita moschata GN=CmLsi1(B+) PE=2 SV=1) HSP 1 Score: 349.7 bits (896), Expect = 3.0e-93 Identity = 177/255 (69.41%), Postives = 209/255 (81.96%), Query Frame = 1
BLAST of Cucsa.338930 vs. TrEMBL
Match: D7SXB4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0108g00700 PE=3 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 3.3e-92 Identity = 180/254 (70.87%), Postives = 209/254 (82.28%), Query Frame = 1
BLAST of Cucsa.338930 vs. TAIR10
Match: AT5G37820.1 (AT5G37820.1 NOD26-like intrinsic protein 4;2) HSP 1 Score: 233.4 bits (594), Expect = 1.6e-61 Identity = 118/223 (52.91%), Postives = 153/223 (68.61%), Query Frame = 1
BLAST of Cucsa.338930 vs. TAIR10
Match: AT5G37810.1 (AT5G37810.1 NOD26-like intrinsic protein 4;1) HSP 1 Score: 231.5 bits (589), Expect = 6.0e-61 Identity = 117/223 (52.47%), Postives = 151/223 (67.71%), Query Frame = 1
BLAST of Cucsa.338930 vs. TAIR10
Match: AT4G18910.1 (AT4G18910.1 NOD26-like intrinsic protein 1;2) HSP 1 Score: 220.7 bits (561), Expect = 1.1e-57 Identity = 109/224 (48.66%), Postives = 152/224 (67.86%), Query Frame = 1
BLAST of Cucsa.338930 vs. TAIR10
Match: AT4G19030.1 (AT4G19030.1 NOD26-like major intrinsic protein 1) HSP 1 Score: 212.6 bits (540), Expect = 2.9e-55 Identity = 109/242 (45.04%), Postives = 157/242 (64.88%), Query Frame = 1
BLAST of Cucsa.338930 vs. TAIR10
Match: AT1G80760.1 (AT1G80760.1 NOD26-like intrinsic protein 6;1) HSP 1 Score: 208.8 bits (530), Expect = 4.2e-54 Identity = 99/223 (44.39%), Postives = 146/223 (65.47%), Query Frame = 1
BLAST of Cucsa.338930 vs. NCBI nr
Match: gi|700204438|gb|KGN59571.1| (hypothetical protein Csa_3G826650 [Cucumis sativus]) HSP 1 Score: 515.8 bits (1327), Expect = 4.5e-143 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 1
BLAST of Cucsa.338930 vs. NCBI nr
Match: gi|793418327|ref|NP_001292702.1| (aquaporin NIP2-1-like [Cucumis sativus]) HSP 1 Score: 514.2 bits (1323), Expect = 1.3e-142 Identity = 260/261 (99.62%), Postives = 260/261 (99.62%), Query Frame = 1
BLAST of Cucsa.338930 vs. NCBI nr
Match: gi|659085425|ref|XP_008443412.1| (PREDICTED: aquaporin NIP2-1-like [Cucumis melo]) HSP 1 Score: 491.1 bits (1263), Expect = 1.2e-135 Identity = 246/261 (94.25%), Postives = 256/261 (98.08%), Query Frame = 1
BLAST of Cucsa.338930 vs. NCBI nr
Match: gi|33468424|emb|CAD67694.1| (Nod26-like protein [Cucurbita pepo]) HSP 1 Score: 350.1 bits (897), Expect = 3.3e-93 Identity = 177/255 (69.41%), Postives = 209/255 (81.96%), Query Frame = 1
BLAST of Cucsa.338930 vs. NCBI nr
Match: gi|327187680|dbj|BAK09175.1| (silicon transporter 1 [Cucurbita moschata]) HSP 1 Score: 349.7 bits (896), Expect = 4.3e-93 Identity = 177/255 (69.41%), Postives = 209/255 (81.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |