Cucsa.337230 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGGAAGCAAATGGGATCATTTCAAAGCTCAAAGCCCATTTGCCCCAGCAACAAGCATTGTTCGGAATGGGTAAAGAATAATATGAAATACTGTCTTTGTGGTACGAAAGATGGGGTTTCGCTTACTCTGGGAATGATTAGTGTTATCAGTTGGGGTGTAGCTGAGATACCCCAAATCGTTACAAACTACAGGGAAAAATCTTCTGATGGCCTATCTCTTGCCTTCTTGCTAACATGGATACTGGGGTATTTCTTTTCTTTCCTTTTTTCTGTCCTCTTTGATTTTTGGCTTGATTGGCTAGGCTTGGTACTTATACATTTCAGTAATATGACTTATTTAAATGAATGGATAGTGTGCGTATAAAGACTTCCAGTTTGAATAACATAATTTACCTTAGTGCATCTTCATTGAAATATTGTTTAATATTGGCGTGGTTGGCTCTTACCAATTACAAGTTACAGTTAGTGTACTTTAATAGTTCAGAACAACGATTTTTTGTTAATCTTGCTACATCTAACGGGGTTGAAAACACTTGTTACTTTTTTCTTCTTTGTTCTTTTTGACAATTAGAGTGTCACGGACTCTGCTTCTTGTATTAAGCTTATCGTCCATCTCTACTAATTTTGGAGTGGCTGTCCGTACTTTAGGCCTGCTGCAGGAGGCATAGCAGTTGTTAAGTTTTCAAGTTTGGAGCATAAATACAAGACTTTGGGGGTATTTCCAAACATCCCGAGTCTTTGGAACAACTTCCCTTCAGGGTCTATTGAGATCTGTTTTTAAACTCTATTTTCATATAACTCCCTCCTGGAATAATACAGAAGGATTCCGGATTAACTTTTTAAGACTTTATGATTTCTGCAAATTCTGTGGACGTTTTCAAGATTCTCTGTTCGCAATAAACTTTACAGCTTTTACAAAAATAACTAACATCTGAGTCCTTACACTAGTTGATTGGGTATAAGTATTAATTCTGACTTGAGCTCATCTCCGATGGCACTTTAACACTCTTAAGCCAATACAACCTTCTTCTGCCCTGCACCCAAAAGGAACTGTTGGGTTAATCAATATTTACTCTAACCCACTTACAGCGTTATAATTTAGAAATTGGTAGAATTCCTCAAAAAGTTTTTTGCTATTATATAATTATGTGAGTACATCTCTACAAAAATATTTTTCTTGACTGCTTCGGATGTAGTACAAAATGTTTGCCAGATCTTTGAGGTATGGATTCACAAGCATAAGCCTTTCACTAGCCATCACTATGATATGTGCTTTGTGTAGTATTCTTTTGAATTGATTGAGTAGTAGATTACATATCGGACACGTCTCATTTATTTTTACTTTTAAAGTTGCCAAGACACAAAGCAGAGTTTAGTCATCTCTGTATTAAAATTTCTTCCTATCTTTTTGCAGAGACCTTTTCAATGTCTTTGGTTGCATATTGGAACCAGCAACAGTAAGTGGTTCACTTAAATCTATAGAATTAATGCCTTACTTTTCATTGGAAAATTCAACAAGATAAGTTCAGGTTTACTACATCTGTAACCGTTTATGCAAGCAAATAAAGTCCCATCTAAAATAACAGTATATCTCAAGGGAACCATGTCAGAGTCATGTTCCTTGGCAAGTTTGTCTAACTCAATTAAATTGTGGGTCTTGAACTTAATCATGTTTTAGAGATTTATCTTTTCAAATCCTACATGTTTATTATTAATTTTAACTTTGCTTGTTTATGCAGCTTCCAACTCAATATTACATGGCATTGGTATGGTCTAAGGTTATGAAATTATTTTTCAAGTCTCATTCCGTCCAAATTTTGTACACATCCAATACCTTATTTTTTCTTCTGATATTGGTGGAAATCATTATCATGCTGGTATGCAGTTGTATACCATCACAACAGGGATTCTGTTTACACAGGCCATATATTATGGGCACATATATCCTCAAATGAAGTATCGGCGAAGACAATGCAAGGTTATACACTCTTTTTTCAACTTACTGCTTGTTGCTTGTCTGCCTATACTATTTACATGTATATATGTATATATGCTACTATACATAGGTACATACATTTACATATACACTTTCACTTATGACAAATACACATGGGTGAGATACAGTTTCCAGTTAAAGCTGATGTGCTTTTCCTTTTCAGCTAAATCTGCTTTTTCTTTCGAGAATGATAAGTTCTGTCTGCTTACACGATCCCAGACATTTCAAATAGAGTGTCCTTCCCTCTACAAATCTTAATACCCAACCCAACATTAGGGGAAAGAACATAGTTTCTTTAACTTCCCTCAATGATCTTTTAGTGATAGTGTCCATAATATGCTATTTATTTGTTTGTGGTACATCATATTTCTATCACAGTGCCTGGTCTGAACACTGAAATGTGATGACATTTTAATCCAATTCTTTAGGTTCTCCTTTGGGCTGTAATGCCTAAATAATCATCAAAAGCTATTATGCACAGGAGAATTTGCATTATAGATGAAGCTCTTTCTAGTTTCTACAAAGATAAATTCTATTCATTTTTCATTTGTGAAACTATTGAATACCTTAAGTTTTTCTTCTACAAAAATACGTTTTTATTTGTTTTTCCTAATATTATTTCTCAATTTTCTGCATGCCTTAGGGTCTTGTTCACAGTGAGGCCAATGCACAGATTGATGCACGTGATAAAGCCCAACAGAGCTATGGCAGTGTTAATGTGAATCAAGTCAACAATGATGACATGAGCAAGTTCAATACTTCAAAAAGAGAAAGTGCTTCCACTAGTCCTATTCCTCTTCCAATGCTTCGACAAAATAGTTCCACGGGTCGAGAACTATATTACATGTAATTATTTTCTCCTTTCACTGTCCAGCTTCCTGCTTTAGTCCTATATCATACAAAAGTCACAATCAATTGAAATTATTGTGTTTAGACGATTTTAGCCTTCAATCTGGAAATTATAATTATTTAAATGAATGTAGAATGTTGTAGTCACCTTGAAGAATTATTTAATTTGCAGAATGAGTTTCAATGTTAGAAATGCAATAATCATAACTCAGTCATTCAACTCTATTCCGACTAAAAAAGGGATCATATAATCACTTTGATCTACCTAACTAATTGATTTTGGAATACCTTTGATTTATTCAGCTTGCTTGGATCACAATGGCCTCTCTTCTTCCTCTACCTCAATCACTCTTTAACACCTTTTGTAATAGAGATATTGAACATTTTTGGAAGGCTAATTCAAATAATGGATAACACTTCAAAGACTCTAAGAAACGGGATCGCTCTGGTCTCCACACTCTAAAATACAACTTTACACCTACCTTAGAGACTCATATCCTCATCCCTAAGAAATGGAAGAGGATTTGGGGTGGTAAGTTTTCGAAGAAAATTGAAGTAATTTTTATCAATTCACTTCTCAAATTTATAGAAATTGACCTACAATGCTAGTTTGGTGGTAAAAGTTGGACAATTATCAATTCTTTCGTCTCTTAATAGGGATTTCTAGTCTTACTCTGTTTGTGTGTATATATGTTTGATTAATTAATTGGTATGTTTCTCTGGTCATTGTGTTCTCTCTTTGTTTGTAAATAATCAGGTCAGCAAGATCTCTATCGAGGAGTCATACTCCCACATCAGGGTCTTTTTTAAGACAAAAAATGACTCCTCCTTATATTCACAACCCAATGCAAGAGCCTTTACTTGATGGAAATGAACCATCGTCAGCTGCAAGACCTCCCAATGTCAAGACAATGTTATGTTTGGTAAGCCGTATTGCATAA GGGAAGCAAATGGGATCATTTCAAAGCTCAAAGCCCATTTGCCCCAGCAACAAGCATTGTTCGGAATGGGTAAAGAATAATATGAAATACTGTCTTTGTGGTACGAAAGATGGGGTTTCGCTTACTCTGGGAATGATTAGTGTTATCAGTTGGGGTGTAGCTGAGATACCCCAAATCGTTACAAACTACAGGGAAAAATCTTCTGATGGCCTATCTCTTGCCTTCTTGCTAACATGGATACTGGGAGACCTTTTCAATGTCTTTGGTTGCATATTGGAACCAGCAACACTTCCAACTCAATATTACATGGCATTGTTGTATACCATCACAACAGGGATTCTGTTTACACAGGCCATATATTATGGGCACATATATCCTCAAATGAAGTATCGGCGAAGACAATGCAAGGGTCTTGTTCACAGTGAGGCCAATGCACAGATTGATGCACGTGATAAAGCCCAACAGAGCTATGGCAGTGTTAATGTGAATCAAGTCAACAATGATGACATGAGCAAGTTCAATACTTCAAAAAGAGAAAGTGCTTCCACTAGTCCTATTCCTCTTCCAATGCTTCGACAAAATAGTTCCACGGGTCGAGAACTATATTACATGTCAGCAAGATCTCTATCGAGGAGTCATACTCCCACATCAGGGTCTTTTTTAAGACAAAAAATGACTCCTCCTTATATTCACAACCCAATGCAAGAGCCTTTACTTGATGGAAATGAACCATCGTCAGCTGCAAGACCTCCCAATGTCAAGACAATGTTATGTTTGGTAAGCCGTATTGCATAA ATGGGATCATTTCAAAGCTCAAAGCCCATTTGCCCCAGCAACAAGCATTGTTCGGAATGGGTAAAGAATAATATGAAATACTGTCTTTGTGGTACGAAAGATGGGGTTTCGCTTACTCTGGGAATGATTAGTGTTATCAGTTGGGGTGTAGCTGAGATACCCCAAATCGTTACAAACTACAGGGAAAAATCTTCTGATGGCCTATCTCTTGCCTTCTTGCTAACATGGATACTGGGAGACCTTTTCAATGTCTTTGGTTGCATATTGGAACCAGCAACACTTCCAACTCAATATTACATGGCATTGTTGTATACCATCACAACAGGGATTCTGTTTACACAGGCCATATATTATGGGCACATATATCCTCAAATGAAGTATCGGCGAAGACAATGCAAGGGTCTTGTTCACAGTGAGGCCAATGCACAGATTGATGCACGTGATAAAGCCCAACAGAGCTATGGCAGTGTTAATGTGAATCAAGTCAACAATGATGACATGAGCAAGTTCAATACTTCAAAAAGAGAAAGTGCTTCCACTAGTCCTATTCCTCTTCCAATGCTTCGACAAAATAGTTCCACGGGTCGAGAACTATATTACATGTCAGCAAGATCTCTATCGAGGAGTCATACTCCCACATCAGGGTCTTTTTTAAGACAAAAAATGACTCCTCCTTATATTCACAACCCAATGCAAGAGCCTTTACTTGATGGAAATGAACCATCGTCAGCTGCAAGACCTCCCAATGTCAAGACAATGTTATGTTTGGTAAGCCGTATTGCATAA MGSFQSSKPICPSNKHCSEWVKNNMKYCLCGTKDGVSLTLGMISVISWGVAEIPQIVTNYREKSSDGLSLAFLLTWILGDLFNVFGCILEPATLPTQYYMALLYTITTGILFTQAIYYGHIYPQMKYRRRQCKGLVHSEANAQIDARDKAQQSYGSVNVNQVNNDDMSKFNTSKRESASTSPIPLPMLRQNSSTGRELYYMSARSLSRSHTPTSGSFLRQKMTPPYIHNPMQEPLLDGNEPSSAARPPNVKTMLCLVSRIA*
BLAST of Cucsa.337230 vs. Swiss-Prot
Match: YPQ3_YEAST (Probable vacuolar amino acid transporter YPQ3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RTC2 PE=1 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 4.8e-12 Identity = 34/78 (43.59%), Postives = 51/78 (65.38%), Query Frame = 1
HSP 2 Score: 36.2 bits (82), Expect = 6.6e-01 Identity = 18/41 (43.90%), Postives = 26/41 (63.41%), Query Frame = 1
BLAST of Cucsa.337230 vs. Swiss-Prot
Match: YPQ1_YEAST (Probable vacuolar amino acid transporter YPQ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPQ1 PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 9.1e-11 Identity = 35/87 (40.23%), Postives = 52/87 (59.77%), Query Frame = 1
HSP 2 Score: 35.8 bits (81), Expect = 8.6e-01 Identity = 17/49 (34.69%), Postives = 29/49 (59.18%), Query Frame = 1
BLAST of Cucsa.337230 vs. Swiss-Prot
Match: LAAT1_CAEEL (Lysosomal amino acid transporter 1 OS=Caenorhabditis elegans GN=laat-1 PE=1 SV=2) HSP 1 Score: 68.6 bits (166), Expect = 1.2e-10 Identity = 37/104 (35.58%), Postives = 56/104 (53.85%), Query Frame = 1
HSP 2 Score: 34.7 bits (78), Expect = 1.9e+00 Identity = 24/94 (25.53%), Postives = 36/94 (38.30%), Query Frame = 1
BLAST of Cucsa.337230 vs. Swiss-Prot
Match: STM1_SCHPO (Seven transmembrane protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=stm1 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.1e-07 Identity = 29/83 (34.94%), Postives = 46/83 (55.42%), Query Frame = 1
HSP 2 Score: 43.1 bits (100), Expect = 5.4e-03 Identity = 30/90 (33.33%), Postives = 46/90 (51.11%), Query Frame = 1
BLAST of Cucsa.337230 vs. Swiss-Prot
Match: YPQ2_YEAST (Probable vacuolar amino acid transporter YPQ2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPQ2 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.4e-06 Identity = 32/95 (33.68%), Postives = 49/95 (51.58%), Query Frame = 1
HSP 2 Score: 33.1 bits (74), Expect = 5.6e+00 Identity = 21/51 (41.18%), Postives = 29/51 (56.86%), Query Frame = 1
BLAST of Cucsa.337230 vs. TrEMBL
Match: A0A0A0LEN4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G815430 PE=4 SV=1) HSP 1 Score: 528.1 bits (1359), Expect = 6.1e-147 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 1
BLAST of Cucsa.337230 vs. TrEMBL
Match: A0A067FAC1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015046mg PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 8.2e-75 Identity = 145/259 (55.98%), Postives = 188/259 (72.59%), Query Frame = 1
BLAST of Cucsa.337230 vs. TrEMBL
Match: A0A059DHV6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02167 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 1.5e-73 Identity = 138/261 (52.87%), Postives = 188/261 (72.03%), Query Frame = 1
BLAST of Cucsa.337230 vs. TrEMBL
Match: B9IHG0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s02400g PE=4 SV=2) HSP 1 Score: 275.8 bits (704), Expect = 5.5e-71 Identity = 145/255 (56.86%), Postives = 182/255 (71.37%), Query Frame = 1
BLAST of Cucsa.337230 vs. TrEMBL
Match: A0A061EVK4_THECC (PQ-loop repeat family protein / transmembrane family protein, putative isoform 3 OS=Theobroma cacao GN=TCM_024082 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 2.8e-67 Identity = 133/249 (53.41%), Postives = 174/249 (69.88%), Query Frame = 1
BLAST of Cucsa.337230 vs. TAIR10
Match: AT2G41050.1 (AT2G41050.1 PQ-loop repeat family protein / transmembrane family protein) HSP 1 Score: 210.3 bits (534), Expect = 1.4e-54 Identity = 114/227 (50.22%), Postives = 155/227 (68.28%), Query Frame = 1
BLAST of Cucsa.337230 vs. TAIR10
Match: AT4G36850.1 (AT4G36850.1 PQ-loop repeat family protein / transmembrane family protein) HSP 1 Score: 158.3 bits (399), Expect = 6.5e-39 Identity = 85/198 (42.93%), Postives = 112/198 (56.57%), Query Frame = 1
BLAST of Cucsa.337230 vs. TAIR10
Match: AT4G20100.1 (AT4G20100.1 PQ-loop repeat family protein / transmembrane family protein) HSP 1 Score: 141.4 bits (355), Expect = 8.2e-34 Identity = 61/98 (62.24%), Postives = 83/98 (84.69%), Query Frame = 1
BLAST of Cucsa.337230 vs. NCBI nr
Match: gi|778685027|ref|XP_004136760.2| (PREDICTED: uncharacterized protein LOC101209754 [Cucumis sativus]) HSP 1 Score: 528.1 bits (1359), Expect = 8.8e-147 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 1
BLAST of Cucsa.337230 vs. NCBI nr
Match: gi|700204246|gb|KGN59379.1| (hypothetical protein Csa_3G815430 [Cucumis sativus]) HSP 1 Score: 528.1 bits (1359), Expect = 8.8e-147 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 1
BLAST of Cucsa.337230 vs. NCBI nr
Match: gi|659084963|ref|XP_008443168.1| (PREDICTED: uncharacterized protein LOC103486835 isoform X2 [Cucumis melo]) HSP 1 Score: 496.1 bits (1276), Expect = 3.7e-137 Identity = 243/261 (93.10%), Postives = 251/261 (96.17%), Query Frame = 1
BLAST of Cucsa.337230 vs. NCBI nr
Match: gi|659084961|ref|XP_008443167.1| (PREDICTED: uncharacterized protein LOC103486835 isoform X1 [Cucumis melo]) HSP 1 Score: 496.1 bits (1276), Expect = 3.7e-137 Identity = 243/261 (93.10%), Postives = 251/261 (96.17%), Query Frame = 1
BLAST of Cucsa.337230 vs. NCBI nr
Match: gi|1009142152|ref|XP_015888569.1| (PREDICTED: uncharacterized protein LOC107423513 [Ziziphus jujuba]) HSP 1 Score: 291.2 bits (744), Expect = 1.8e-75 Identity = 149/261 (57.09%), Postives = 192/261 (73.56%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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