Cucsa.325920 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.325920
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding
Location	scaffold03132 : 208682 .. 209732 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAGGTTATGAGGCAGAAATATCTAGCTGTTTTTtCCTCAAAGCTATCTATTGCCCAGCAAGAGTTCACAAAGTCCTACATGCAGGTATGTTTCTATATCCTGCTGTCTTCCTCTAGGTGGTTACAATGTGTATAGTCATTCACTATATAACTTGTGTAAGATCCTTTTAACAATAAAGATTGATGGTATGGTTACTACTATGTTCTACTATTCAGTTGCTTATTGACCCCCTTTATTCTTTGGACGCTTAAATCGTAGTTTATTTCTTTATGATGGATAGTTGGGGTGCAAAGTTCACCACTACTAACTTATATGCCATACTTGTTCAACATGAAATGAAGGTTGGAAGTGAACTCAAGGACAGGGAAAATTTTAACGACGTTTGGTGGTTGGAAGCAGTTCATCATGCTGAACAGAATAAGGACTTCTCTCATGAGTTGATAAGAAAGATTGAAGAGGCTGTATCTGGAAACCTAAACAACTCAAAATCTAGAGTTGGATCTCGGTATGTGGTGTCGAACTCTCTTCATTACATCATTACTCTTTTCCTCTCAGTTCCTCAAATCATGCTTTATGGCATGTATATTGCATGAATATTAACTGATCTTTTAGCTTGACAACAGTTTCCGCAGCATTAGTGCTTTGAAGTATCATGTTCAGAGTGGTTTGGACCTTTTGGAGGCTTCTAGGAAAGTGGTGCTTGATCGACTTTTAGAAATTGATCAGACCATGAAAAGTCCAAAAGAAGAAGATATTGAACGTGTTAGGTACTGTCGAATTTGTCAGGCAGACAGTAATGGACCACCTTGTGTTCTTTGTGAACTAGATGAACTATTTCAGGTTCTTCCTGATTAGTCCAATTACCTTGATGCTTCCTCTTTGACTTGCATTACGAATATAGGCTCTCTTCTCTTTCTAGGAATATGAGGCAAGACTTTTCCGGCTTAATAAAGTACAAGGAGGAATGGTTACTTCTGTTGAAGAGGCTGTTGAAGCTCAAAAGAAGAAGTCAGCACTCAATCGTTTCTACTGGAGTCTATTGCAGCAAA

mRNA sequence

GTGAGGTTATGAGGCAGAAATATCTAGCTGTTTTTTCCTCAAAGCTATCTATTGCCCAGCAAGAGTTCACAAAGTCCTACATGCAGGTTGGAAGTGAACTCAAGGACAGGGAAAATTTTAACGACGTTTGGTGGTTGGAAGCAGTTCATCATGCTGAACAGAATAAGGACTTCTCTCATGAGTTGATAAGAAAGATTGAAGAGGCTGTATCTGGAAACCTAAACAACTCAAAATCTAGAGTTGGATCTCGTTTCCGCAGCATTAGTGCTTTGAAGTATCATGTTCAGAGTGGTTTGGACCTTTTGGAGGCTTCTAGGAAAGTGGTGCTTGATCGACTTTTAGAAATTGATCAGACCATGAAAAGTCCAAAAGAAGAAGATATTGAACGTGTTAGGTACTGTCGAATTTGTCAGGCAGACAGTAATGGACCACCTTGTGTTCTTTGTGAACTAGATGAACTATTTCAGGTTCTTCCTGATTAGTCCAATTACCTTGATGCTTCCTCTTTGACTTGCATTACGAATATAGGCTCTCTTCTCTTTCTAGGAATATGAGGCAAGACTTTTCCGGCTTAATAAAGTACAAGGAGGAATGGTTACTTCTGTTGAAGAGGCTGTTGAAGCTCAAAAGAAGAAGTCAGCACTCAATCGTTTCTACTGGAGTCTATTGCAGCAAA

Coding sequence (CDS)

GAGGTTATGAGGCAGAAATATCTAGCTGTTTTTtCCTCAAAGCTATCTATTGCCCAGCAAGAGTTCACAAAGTCCTACATGCAGGTTGGAAGTGAACTCAAGGACAGGGAAAATTTTAACGACGTTTGGTGGTTGGAAGCAGTTCATCATGCTGAACAGAATAAGGACTTCTCTCATGAGTTGATAAGAAAGATTGAAGAGGCTGTATCTGGAAACCTAAACAACTCAAAATCTAGAGTTGGATCTCGTTTCCGCAGCATTAGTGCTTTGAAGTATCATGTTCAGAGTGGTTTGGACCTTTTGGAGGCTTCTAGGAAAGTGGTGCTTGATCGACTTTTAGAAATTGATCAGACCATGAAAAGTCCAAAAGAAGAAGATATTGAACGTGTTAGGTACTGTCGAATTTGTCAGGCAGACAGTAATGGACCACCTTGTGTTCTTTGTGAACTAGATGAACTATTTCAGGTTCTTCCTGATTAG

Protein sequence

EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDVWWLEAVHHAEQNKDFSHELIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTMKSPKEEDIERVRYCRICQADSNGPPCVLCELDELFQVLPD*

Homology

[Close]

BLAST of Cucsa.325920 vs. TrEMBL
Match: A0A0A0K8S1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014630 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 5.5e-82
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1    EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDVWWLEAVHHAEQNKDFSHE 60
            EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDVWWLEAVHHAEQNKDFSHE
Sbjct: 1089 EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDVWWLEAVHHAEQNKDFSHE 1148

Query: 61   LIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTMK 120
            LIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTMK
Sbjct: 1149 LIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTMK 1208

Query: 121  SPKEEDIERVRYCRICQADSNGPPCVLCELDELFQ 156
            SPKEEDIERVRYCRICQADSNGPPCVLCELDELFQ
Sbjct: 1209 SPKEEDIERVRYCRICQADSNGPPCVLCELDELFQ 1243

[Close]

BLAST of Cucsa.325920 vs. TrEMBL
Match: A0A0S3RM84_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G138100 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.4e-53
Identity = 110/157 (70.06%), Postives = 131/157 (83.44%), Query Frame = 1


Query: 1    EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKD-RENFNDVWWLEAVHHAEQNKDFSH 60
            E  +QK+L+VFSSKLS+AQQEF  SY+QV +  +D R + N  WWLEA+HH EQ+K+FS 
Sbjct: 968  EDSKQKFLSVFSSKLSVAQQEFQSSYVQVSNAYRDSRTHQNSFWWLEALHHVEQSKEFSS 1027

Query: 61   ELIRKIEEAVSGNLNNSKS-RVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQT 120
            ELIRKIEEA+SG  +NSKS R+ +RFRSISALKY +Q+GLD LEASRK +LDRLLEIDQT
Sbjct: 1028 ELIRKIEEAMSGTSSNSKSSRITARFRSISALKYQIQTGLDQLEASRKTLLDRLLEIDQT 1087

Query: 121  MKSPKEEDIERVRYCRICQADSNGPPCVLCELDELFQ 156
            M+ PKEEDIERV  CR CQ +S+GPPCVLCELDELFQ
Sbjct: 1088 MEKPKEEDIERVGKCRNCQPNSDGPPCVLCELDELFQ 1124

[Close]

BLAST of Cucsa.325920 vs. TrEMBL
Match: A0A067FJL5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g000739mg PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.0e-52
Identity = 107/157 (68.15%), Postives = 126/157 (80.25%), Query Frame = 1


Query: 1    EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDVWWLEAVHHAEQNKDFSHE 60
            E ++QKYL+ FS KLS+AQQEF KSYMQV + L DRE     WWLEA+HHAE NKDFS E
Sbjct: 975  ENLKQKYLSGFSVKLSVAQQEFRKSYMQVCNALDDREKQYSAWWLEALHHAEGNKDFSAE 1034

Query: 61   LIRKIEEAVSGNLNNSKS-RVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTM 120
            LIRKIEEA+SG+LN S++ R  SR+RSIS L YH+QS LD LEASRK +LDRLLEIDQTM
Sbjct: 1035 LIRKIEEAISGSLNKSRALRTASRYRSISGLTYHIQSSLDQLEASRKTLLDRLLEIDQTM 1094

Query: 121  KSPKEEDIERVRYCRICQADSNGPPCVLCELDELFQV 157
            + PKEED++R+R+CRIC    +GP CV CELDE FQV
Sbjct: 1095 EKPKEEDMDRMRHCRICYGVGDGPICVHCELDESFQV 1131

[Close]

BLAST of Cucsa.325920 vs. TrEMBL
Match: K7KA21_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.0e-52
Identity = 110/157 (70.06%), Postives = 126/157 (80.25%), Query Frame = 1


Query: 1    EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDV-WWLEAVHHAEQNKDFSH 60
            E  +QKYL+VFSSKLS +QQEF  SY QV +   D     D  WWLEA+HHAEQNKDFS 
Sbjct: 970  EDSKQKYLSVFSSKLSTSQQEFQNSYTQVCNAYHDSRTDQDTFWWLEALHHAEQNKDFST 1029

Query: 61   ELIRKIEEAVSGNLNNSKS-RVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQT 120
            ELIRKIEEA+SG  NNSKS RV +RFRSIS+LKY +Q+ LD LEASRK++LDRLLEIDQT
Sbjct: 1030 ELIRKIEEAISGTSNNSKSSRVTARFRSISSLKYQIQTALDQLEASRKMLLDRLLEIDQT 1089

Query: 121  MKSPKEEDIERVRYCRICQADSNGPPCVLCELDELFQ 156
            M+ PKEEDIERV  CR CQ + +GPPC+LCELDELFQ
Sbjct: 1090 MEKPKEEDIERVGKCRNCQPNCDGPPCILCELDELFQ 1126

[Close]

BLAST of Cucsa.325920 vs. TrEMBL
Match: K7KA22_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G219200 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.0e-52
Identity = 110/157 (70.06%), Postives = 126/157 (80.25%), Query Frame = 1


Query: 1    EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDV-WWLEAVHHAEQNKDFSH 60
            E  +QKYL+VFSSKLS +QQEF  SY QV +   D     D  WWLEA+HHAEQNKDFS 
Sbjct: 970  EDSKQKYLSVFSSKLSTSQQEFQNSYTQVCNAYHDSRTDQDTFWWLEALHHAEQNKDFST 1029

Query: 61   ELIRKIEEAVSGNLNNSKS-RVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQT 120
            ELIRKIEEA+SG  NNSKS RV +RFRSIS+LKY +Q+ LD LEASRK++LDRLLEIDQT
Sbjct: 1030 ELIRKIEEAISGTSNNSKSSRVTARFRSISSLKYQIQTALDQLEASRKMLLDRLLEIDQT 1089

Query: 121  MKSPKEEDIERVRYCRICQADSNGPPCVLCELDELFQ 156
            M+ PKEEDIERV  CR CQ + +GPPC+LCELDELFQ
Sbjct: 1090 MEKPKEEDIERVGKCRNCQPNCDGPPCILCELDELFQ 1126

[Close]

BLAST of Cucsa.325920 vs. TAIR10
Match: AT2G40770.1 (AT2G40770.1 zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid binding)

HSP 1 Score: 187.6 bits (475), Expect = 6.1e-48
Identity = 92/156 (58.97%), Postives = 115/156 (73.72%), Query Frame = 1


Query: 1    EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDVWWLEAVHHAEQNKDFSHE 60
            + ++ KYL+ F+SKLS AQ EF KSY QV   L +      VWWL+A+   EQNKDFS E
Sbjct: 956  DTLKVKYLSAFNSKLSAAQHEFKKSYNQVSESLSNMGKQRSVWWLDALQLTEQNKDFSSE 1015

Query: 61   LIRKIEEAVSGNLNNSKS-RVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTM 120
            L RKIEEA+ GNLNNS S R  SRFR+I  +K H+Q+ +D+LE SRK V+DR+LEIDQTM
Sbjct: 1016 LTRKIEEALHGNLNNSSSSRESSRFRTIHGMKLHLQTCMDMLERSRKKVIDRILEIDQTM 1075

Query: 121  KSPKEEDIERVRYCRICQADSNGPPCVLCELDELFQ 156
            + PK EDIER+  C+ C  +S+GPPC+ CELDELFQ
Sbjct: 1076 EKPKLEDIERISNCKYCNKNSDGPPCIHCELDELFQ 1111

[Close]

BLAST of Cucsa.325920 vs. NCBI nr
Match: gi|778709713|ref|XP_011656442.1| (PREDICTED: E3 ubiquitin-protein ligase SHPRH isoform X2 [Cucumis sativus])

HSP 1 Score: 311.6 bits (797), Expect = 7.9e-82
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1    EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDVWWLEAVHHAEQNKDFSHE 60
            EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDVWWLEAVHHAEQNKDFSHE
Sbjct: 922  EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDVWWLEAVHHAEQNKDFSHE 981

Query: 61   LIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTMK 120
            LIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTMK
Sbjct: 982  LIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTMK 1041

Query: 121  SPKEEDIERVRYCRICQADSNGPPCVLCELDELFQ 156
            SPKEEDIERVRYCRICQADSNGPPCVLCELDELFQ
Sbjct: 1042 SPKEEDIERVRYCRICQADSNGPPCVLCELDELFQ 1076

[Close]

BLAST of Cucsa.325920 vs. NCBI nr
Match: gi|700190639|gb|KGN45843.1| (hypothetical protein Csa_6G014630 [Cucumis sativus])

HSP 1 Score: 311.6 bits (797), Expect = 7.9e-82
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1    EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDVWWLEAVHHAEQNKDFSHE 60
            EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDVWWLEAVHHAEQNKDFSHE
Sbjct: 1089 EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDVWWLEAVHHAEQNKDFSHE 1148

Query: 61   LIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTMK 120
            LIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTMK
Sbjct: 1149 LIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTMK 1208

Query: 121  SPKEEDIERVRYCRICQADSNGPPCVLCELDELFQ 156
            SPKEEDIERVRYCRICQADSNGPPCVLCELDELFQ
Sbjct: 1209 SPKEEDIERVRYCRICQADSNGPPCVLCELDELFQ 1243

[Close]

BLAST of Cucsa.325920 vs. NCBI nr
Match: gi|778709710|ref|XP_011656441.1| (PREDICTED: E3 ubiquitin-protein ligase SHPRH isoform X1 [Cucumis sativus])

HSP 1 Score: 311.6 bits (797), Expect = 7.9e-82
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1    EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDVWWLEAVHHAEQNKDFSHE 60
            EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDVWWLEAVHHAEQNKDFSHE
Sbjct: 989  EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDVWWLEAVHHAEQNKDFSHE 1048

Query: 61   LIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTMK 120
            LIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTMK
Sbjct: 1049 LIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTMK 1108

Query: 121  SPKEEDIERVRYCRICQADSNGPPCVLCELDELFQ 156
            SPKEEDIERVRYCRICQADSNGPPCVLCELDELFQ
Sbjct: 1109 SPKEEDIERVRYCRICQADSNGPPCVLCELDELFQ 1143

[Close]

BLAST of Cucsa.325920 vs. NCBI nr
Match: gi|659113862|ref|XP_008456789.1| (PREDICTED: E3 ubiquitin-protein ligase SHPRH isoform X2 [Cucumis melo])

HSP 1 Score: 303.9 bits (777), Expect = 1.6e-79
Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 1


Query: 1    EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDVWWLEAVHHAEQNKDFSHE 60
            EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDREN NDVWWLEAVHHAEQNKDFSHE
Sbjct: 948  EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENLNDVWWLEAVHHAEQNKDFSHE 1007

Query: 61   LIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTMK 120
            LIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTM+
Sbjct: 1008 LIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTME 1067

Query: 121  SPKEEDIERVRYCRICQADSNGPPCVLCELDELFQ 156
            +PKEEDIERVRYCR CQADSNGPPCVLCELDELFQ
Sbjct: 1068 NPKEEDIERVRYCRNCQADSNGPPCVLCELDELFQ 1102

[Close]

BLAST of Cucsa.325920 vs. NCBI nr
Match: gi|659113864|ref|XP_008456790.1| (PREDICTED: E3 ubiquitin-protein ligase SHPRH isoform X3 [Cucumis melo])

HSP 1 Score: 303.9 bits (777), Expect = 1.6e-79
Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 1


Query: 1    EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENFNDVWWLEAVHHAEQNKDFSHE 60
            EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDREN NDVWWLEAVHHAEQNKDFSHE
Sbjct: 922  EVMRQKYLAVFSSKLSIAQQEFTKSYMQVGSELKDRENLNDVWWLEAVHHAEQNKDFSHE 981

Query: 61   LIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTMK 120
            LIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTM+
Sbjct: 982  LIRKIEEAVSGNLNNSKSRVGSRFRSISALKYHVQSGLDLLEASRKVVLDRLLEIDQTME 1041

Query: 121  SPKEEDIERVRYCRICQADSNGPPCVLCELDELFQ 156
            +PKEEDIERVRYCR CQADSNGPPCVLCELDELFQ
Sbjct: 1042 NPKEEDIERVRYCRNCQADSNGPPCVLCELDELFQ 1076

The following BLAST results are available for this feature:

BLAST of Cucsa.325920 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8S1_CUCSA	5.5e-82	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014630 PE=4 SV=1	[more]
A0A0S3RM84_PHAAN	1.4e-53	70.06	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G138100 PE=...	[more]
A0A067FJL5_CITSI	2.0e-52	68.15	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g000739mg PE=4 SV=1	[more]
K7KA21_SOYBN	2.0e-52	70.06	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
K7KA22_SOYBN	2.0e-52	70.06	Uncharacterized protein OS=Glycine max GN=GLYMA_02G219200 PE=4 SV=1	[more]

BLAST of Cucsa.325920 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G40770.1	6.1e-48	58.97	zinc ion binding;DNA binding;helicases;ATP binding;nucleic acid bind...	[more]

BLAST of Cucsa.325920 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778709713\|ref\|XP_011656442.1\|	7.9e-82	100.00	PREDICTED: E3 ubiquitin-protein ligase SHPRH isoform X2 [Cucumis sativus]	[more]
gi\|700190639\|gb\|KGN45843.1\|	7.9e-82	100.00	hypothetical protein Csa_6G014630 [Cucumis sativus]	[more]
gi\|778709710\|ref\|XP_011656441.1\|	7.9e-82	100.00	PREDICTED: E3 ubiquitin-protein ligase SHPRH isoform X1 [Cucumis sativus]	[more]
gi\|659113862\|ref\|XP_008456789.1\|	1.6e-79	97.42	PREDICTED: E3 ubiquitin-protein ligase SHPRH isoform X2 [Cucumis melo]	[more]
gi\|659113864\|ref\|XP_008456790.1\|	1.6e-79	97.42	PREDICTED: E3 ubiquitin-protein ligase SHPRH isoform X3 [Cucumis melo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.325920.1	Cucsa.325920.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.325920	Cla016428	Watermelon (97103) v1	cgywmB591
Cucsa.325920	Csa6G014630	Cucumber (Chinese Long) v2	cgycuB465
Cucsa.325920	MELO3C020016	Melon (DHL92) v3.5.1	cgymeB536
Cucsa.325920	ClCG11G005620	Watermelon (Charleston Gray)	cgywcgB562
Cucsa.325920	CSPI06G02230	Wild cucumber (PI 183967)	cgycpiB491
Cucsa.325920	CmaCh15G001730	Cucurbita maxima (Rimu)	cgycmaB0903
Cucsa.325920	CmoCh15G001840	Cucurbita moschata (Rifu)	cgycmoB0900
Cucsa.325920	Lsi03G002570	Bottle gourd (USVL1VR-Ls)	cgylsiB533
Cucsa.325920	Cp4.1LG13g07670	Cucurbita pepo (Zucchini)	cgycpeB0859
Cucsa.325920	MELO3C020016.2	Melon (DHL92) v3.6.1	cgymedB537
Cucsa.325920	CsaV3_6G002390	Cucumber (Chinese Long) v3	cgycucB506
Cucsa.325920	Cla97C11G212550	Watermelon (97103) v2	cgywmbB566
Cucsa.325920	Bhi04G001818	Wax gourd	cgywgoB660
Cucsa.325920	Carg02163	Silver-seed gourd	carcgyB0319

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.325920	Silver-seed gourd	carcgyB0026
Cucsa.325920	Wax gourd	cgywgoB659
Cucsa.325920	Cucurbita maxima (Rimu)	cgycmaB0905
Cucsa.325920	Cucurbita moschata (Rifu)	cgycmoB0903
Cucsa.325920	Cucurbita pepo (Zucchini)	cgycpeB0861