Cucsa.321800 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.GTGAATCCAGAAGTAAATGGTGATTTTGTCACTAGAAGCTTTGTATATTGGACGGTAAGTGAATTGAATTTTTGTTTTGTCCCATCACATTTACATTATTGTTTGTGTTATTGATTTGTGACTGAATTAATTTTCAAAGTTTTTTTTAAAATAAGAAAACTATATAATACACCTTCTTCTAAATTGATTTTTTTTTGGGGATATTATTCTACACTTTTCTTAGAAAATACATGTAAAAAAAATTGTTCTCTAGTATTTATTTTGTATCTAAATTTCAAAATATTATATTTGAATTTAATTAATATTTAGTTTCAAAGTTTCAATAATATATTACACATTAACTACTGTTGAGTTTTATTTAGTTCTTACCTTTCAATATTGTAACTTTTATTCTTGAATTATTACCATATATTCATTGTTAGCGTTAACTTTTAGTTAGTTAATCTAAAATAATTATGTTGTGACATTGATTGAAGCAAGTATTAGTGAAACAGTATACTTAAAATTGAGACCATAGATTAAAACAAAACTTAAAATTAAAAACTATAACATTTTGAAATCAAGAGGAATCAAATGAAAACAGTTAGACTAATCGACATAGATTGACATAGAGACCGAAAATGTATTTTTCCCCCTTATATATATATACATAATAATTATTCAAATCTCATGTGTTAGTTTTATAAATTCAATATATATGAAAGGAGTAAAAGAGATTTGAACCTTCGATGTTACAAAGACGAGAGTATATTCATATCAAATACACCGTTAAATTATGTCCACTTTTGATAATAATATCTTTTGCATATGCTTAGATTTCAAAATTGTAACAGGCTGACGGAGGTACTACGACAGGATGTTATAATATGTATTGTCAAGGCTTCGTACAAGTAAATCCAAGTCATCATGTAGGCGCTCCTCTTCTTCCAACCTCCACGTATGAAGGACAACAATATGACTATCAGTTCACCATCATTCAAGTAATTCTCAAACAAGACCTTAATTACATATGAATCATGCTAGCTATTATATTTATTGATGAATGAGTTATATGTTAAATTTTGAAATGTAGATCGAAGGGAATTGGTGGGTTCTGGTAGGTGAAAATCTGGGATTAGGATATTGGCCAAAGGAGTTGATTCAAAATCTAGTTGATGGGGCAGATCAAATAGCATGGGGAGGCATTGCACAGCCATCAATAGATGGAGTGAGCCCTATGTTGGGGAGTGGACATAAGCCAAATGAAAATGGTGATTATAATGAAGGTTGTTACATAAGAAACATTCAAATCATATCAGGTGCAGCAACAAATACTTATGTACTGCCAACATGGGATAACACACTGAGTTATTCAAGTAACACTAGTTGTTATGATTTGAACCCTAATGTGAATTGTGGTTATGATATGATGGAATATTGCTTCACCTTTGGAGGACCCGGTGGACCTAATTGTGAAGCCACCATCTTTTAA GTGAATCCAGAAGTAAATGGTGATTTTGTCACTAGAAGCTTTGTATATTGGACGGCTGACGGAGGTACTACGACAGGATGTTATAATATGTATTGTCAAGGCTTCGTACAAGTAAATCCAAGTCATCATGTAGGCGCTCCTCTTCTTCCAACCTCCACGTATGAAGGACAACAATATGACTATCAGTTCACCATCATTCAAATCGAAGGGAATTGGTGGGTTCTGGTAGGTGAAAATCTGGGATTAGGATATTGGCCAAAGGAGTTGATTCAAAATCTAGTTGATGGGGCAGATCAAATAGCATGGGGAGGCATTGCACAGCCATCAATAGATGGAGTGAGCCCTATGTTGGGGAGTGGACATAAGCCAAATGAAAATGGTGATTATAATGAAGGTTGTTACATAAGAAACATTCAAATCATATCAGGTGCAGCAACAAATACTTATGTACTGCCAACATGGGATAACACACTGAGTTATTCAAGTAACACTAGTTGTTATGATTTGAACCCTAATGTGAATTGTGGTTATGATATGATGGAATATTGCTTCACCTTTGGAGGACCCGGTGGACCTAATTGTGAAGCCACCATCTTTTAA GTGAATCCAGAAGTAAATGGTGATTTTGTCACTAGAAGCTTTGTATATTGGACGGCTGACGGAGGTACTACGACAGGATGTTATAATATGTATTGTCAAGGCTTCGTACAAGTAAATCCAAGTCATCATGTAGGCGCTCCTCTTCTTCCAACCTCCACGTATGAAGGACAACAATATGACTATCAGTTCACCATCATTCAAATCGAAGGGAATTGGTGGGTTCTGGTAGGTGAAAATCTGGGATTAGGATATTGGCCAAAGGAGTTGATTCAAAATCTAGTTGATGGGGCAGATCAAATAGCATGGGGAGGCATTGCACAGCCATCAATAGATGGAGTGAGCCCTATGTTGGGGAGTGGACATAAGCCAAATGAAAATGGTGATTATAATGAAGGTTGTTACATAAGAAACATTCAAATCATATCAGGTGCAGCAACAAATACTTATGTACTGCCAACATGGGATAACACACTGAGTTATTCAAGTAACACTAGTTGTTATGATTTGAACCCTAATGTGAATTGTGGTTATGATATGATGGAATATTGCTTCACCTTTGGAGGACCCGGTGGACCTAATTGTGAAGCCACCATCTTTTAA VNPEVNGDFVTRSFVYWTADGGTTTGCYNMYCQGFVQVNPSHHVGAPLLPTSTYEGQQYDYQFTIIQIEGNWWVLVGENLGLGYWPKELIQNLVDGADQIAWGGIAQPSIDGVSPMLGSGHKPNENGDYNEGCYIRNIQIISGAATNTYVLPTWDNTLSYSSNTSCYDLNPNVNCGYDMMEYCFTFGGPGGPNCEATIF*
BLAST of Cucsa.321800 vs. TrEMBL
Match: A0A0A0L1W6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G011700 PE=4 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 1.1e-100 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1
BLAST of Cucsa.321800 vs. TrEMBL
Match: A0A0A0L400_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G011710 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 5.3e-66 Identity = 123/199 (61.81%), Postives = 149/199 (74.87%), Query Frame = 1
BLAST of Cucsa.321800 vs. TrEMBL
Match: V4SWW2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012304mg PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 6.1e-38 Identity = 94/195 (48.21%), Postives = 115/195 (58.97%), Query Frame = 1
BLAST of Cucsa.321800 vs. TrEMBL
Match: W9QP71_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018563 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 4.5e-33 Identity = 75/195 (38.46%), Postives = 110/195 (56.41%), Query Frame = 1
BLAST of Cucsa.321800 vs. TrEMBL
Match: C5WW59_SORBI (Putative uncharacterized protein Sb01g004360 OS=Sorghum bicolor GN=Sb01g004360 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 5.9e-33 Identity = 88/201 (43.78%), Postives = 113/201 (56.22%), Query Frame = 1
BLAST of Cucsa.321800 vs. TAIR10
Match: AT5G56530.1 (AT5G56530.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 138.3 bits (347), Expect = 5.3e-33 Identity = 78/201 (38.81%), Postives = 108/201 (53.73%), Query Frame = 1
BLAST of Cucsa.321800 vs. TAIR10
Match: AT1G55360.1 (AT1G55360.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 134.8 bits (338), Expect = 5.8e-32 Identity = 76/195 (38.97%), Postives = 101/195 (51.79%), Query Frame = 1
BLAST of Cucsa.321800 vs. TAIR10
Match: AT3G13510.1 (AT3G13510.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 134.8 bits (338), Expect = 5.8e-32 Identity = 77/200 (38.50%), Postives = 103/200 (51.50%), Query Frame = 1
BLAST of Cucsa.321800 vs. TAIR10
Match: AT5G18460.1 (AT5G18460.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 132.9 bits (333), Expect = 2.2e-31 Identity = 71/200 (35.50%), Postives = 110/200 (55.00%), Query Frame = 1
BLAST of Cucsa.321800 vs. TAIR10
Match: AT2G20170.1 (AT2G20170.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 129.0 bits (323), Expect = 3.2e-30 Identity = 74/196 (37.76%), Postives = 107/196 (54.59%), Query Frame = 1
BLAST of Cucsa.321800 vs. NCBI nr
Match: gi|659096570|ref|XP_008449166.1| (PREDICTED: uncharacterized protein LOC103491117 [Cucumis melo]) HSP 1 Score: 395.2 bits (1014), Expect = 6.8e-107 Identity = 177/189 (93.65%), Postives = 184/189 (97.35%), Query Frame = 1
BLAST of Cucsa.321800 vs. NCBI nr
Match: gi|659096570|ref|XP_008449166.1| (PREDICTED: uncharacterized protein LOC103491117 [Cucumis melo]) HSP 1 Score: 250.4 bits (638), Expect = 2.7e-63 Identity = 118/199 (59.30%), Postives = 148/199 (74.37%), Query Frame = 1
HSP 2 Score: 374.0 bits (959), Expect = 1.6e-100 Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1
BLAST of Cucsa.321800 vs. NCBI nr
Match: gi|778688303|ref|XP_011652715.1| (PREDICTED: uncharacterized protein LOC105435061 [Cucumis sativus]) HSP 1 Score: 288.5 bits (737), Expect = 9.0e-75 Identity = 131/135 (97.04%), Postives = 133/135 (98.52%), Query Frame = 1
BLAST of Cucsa.321800 vs. NCBI nr
Match: gi|778688303|ref|XP_011652715.1| (PREDICTED: uncharacterized protein LOC105435061 [Cucumis sativus]) HSP 1 Score: 258.8 bits (660), Expect = 7.6e-66 Identity = 123/199 (61.81%), Postives = 149/199 (74.87%), Query Frame = 1
HSP 2 Score: 258.8 bits (660), Expect = 7.6e-66 Identity = 123/199 (61.81%), Postives = 149/199 (74.87%), Query Frame = 1
BLAST of Cucsa.321800 vs. NCBI nr
Match: gi|567871643|ref|XP_006428411.1| (hypothetical protein CICLE_v10012304mg [Citrus clementina]) HSP 1 Score: 165.6 bits (418), Expect = 8.8e-38 Identity = 94/195 (48.21%), Postives = 115/195 (58.97%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |