Cucsa.318910 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.318910
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Integrator complex subunit 11
Location	scaffold03076 : 370988 .. 386430 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTATCCAACAATGGCATTGGCTCCTATAACGTTGGAGGACTATCGAAAAGTGATGGTTGATCGAAGGGGTGAAGCAGAACAATTTACTAATGACCATATTATGGAGTGCTTGAAAAAaGGTAACTTAATTATGTCAAGATCTTAAATAGTATGCAGCTAGTCTCTGGCTGGGACTGTGATTGTTTAGGCGGCCAAATTTTAAGTGTTATCTCCATTTCTTTAAAACGGTTGAAACATCGAAGTTTCATGGTCCATAGAGGAGTATGGTACTACATGTCCATGTTGGTTAATCTCACAATGTGATTTATTTATTATTTGTTCTTTTTCCAAAATGAAACAAATATTTTCATTGAAGTAATTAATGCTTCTTCCTAGTTCTCTCTTGCCAAGTCTTTCACTGATTTCGCTTTCATGTCTCCCACTGGGCTTCGATTTTGAAGACTTTTTATAATCATTCTATGAACTTGATTTTGTAGTTGGAGTCCTTTCTTATAGTGGGATTCCTCTTTTTGTGGGCTCGGTTTTGTATGCTCGTGTTTTCTAATGAAAGTTGTGCTTTTCATTAAAAAATGGAAGTCTTTAGTTGGGATATGAATGCAGCAAGCTTGCCAAATATTTTGGAAATCTCGAACATTAGCATATAGTTCAGGTAAATGATCAGAAGCTATAATTTCCCCACGAAGTAGAGTTAGGAGTGTACCTTTCCTTCTTAGAGCACCAGTGTACCTTTCCTGCTTAGAGCGTCAGACACTTTGTTTACTTTACGTTGTGTATGTTCGATCACAAAGTCAAATCGTTGGAGGAAATGAATCTGCCTAGCATGGATATGACTGTTTTCCTTTCGTGCTTGTAAGAACTTCAAAGGAAAGTGGTTAGTTTACAACACAAATTCTTCCCCAAGCAGATAACGCTCCCACTGTTTTAAGGACGTAAGAGGAGAGTAGAGTTCTTGCTTGTAGGTTGACCATTTCAATATAGAAGAGCTTAGGCCTTGTTTGGTTTGTGGTTCAAAAGTTATTTTAGAGAACAAAGAATTTAGTAGAAAACACAAATCTTCTTTTTCACAATATATTAAAACACGTTTGGTTTCAATTTGAACTCAAAATTCAAAATTTGTGTTTGATTGTGAATTTGGAAATGCAATAGTGTATCCCATGTTCATAATTTCTGAAAACAAAATTTAAAAACAAAAAACGAGAATTTTTTTTTTTtGAAAATGGGCTACTTCAAAGGTATTTGGAAATCGTTTTTAAAAATAGGTATACCAAACGTGCTTTAAATTTTTTTCTTGTATTTTTtGTTTTTtAAAACATAAAAGCAAAAATAAATCACGAACCAACAAACCAAACAAAGGTTTTGCTAAAGAATTCTATGGGGTGTTTATTTTGACTTAAAATTGCCCCTATTCCTATTCGAGAAGCATCTACAAATACGTCAAAAGGTTTATTAAAATCTGAAATCCTAGAACTGTTGTTGAGCTTAAGACTCTTTTCAACCAGAAAAACTGTGTTTGGTTTTCCCCCATGCAAAGGGAACTTTGGTTTTAAGTCCTCTGTCCTCTGTCCTCCTCCCCCAGTCCACGGTTTCCACCCAGCTTCGGCATTCTCTAATTCCGGCAAGACAATAGTTTCAGACAGAGGTGAAAAGCTGCAAAATCCAAGATTCGTTTTACTTCATATGCTTTGAAAGAGGATATTTCCGTATTGAGGATGTGGATTACAGAAAAATTCTCAAAGTGTCCAAGATCCAACTTGAATGGTTTATGGAAGCTATTACGAACCTAGTGAAAGAACCAGGATCTTACAGAAATGAAGGACGTGAATCAGCAAGACTAACTAAATTTCGAACTTGTTCAGGGTGGTTCGTGAGGTGTGTAGCACGAAAGGGATACAGTAACTTCTCCTTTATTCACATTGAGGTTTAGATTCTAAGTTCCATCGCTTACCACCTTCATTACCTTTCCAAAAGACTTCCATCAAACACTCTAAATCCAAGCTCAACTTGAGAAGGCATAAATGCATATTGGAAAGAGATGTAGTTAAGGGGATACTTGAGATAACTGAGTTGCAAAGAGTTAATCATCTCCTTGTGAGGGATAAAAATGTTTCTAGCAAGCTTGTTAATTTTTTTtCAATTACCATTTTACCGAAAAAaTTACTGGCTGACCACCAAAGGGGAAGGCCAAGATAAAGGAGATGTAAGGTTACCACCTTACAATTGGTCCGCCTTGACACTTCAGACAACTTTAAGTTTTCCACATTTAGACCACAAATTGCTAATTTCTCCTTCATTAACTATCAGACCTGATCATGCTTCAAAAAGAGCAATAATTTAATTAACACAACAGGCATTGCATTATTATATTTACAGAACAGTTAAGTGTCATCAGCAAACTGGAGGATAGAATGAATTTTATCTCTTCAAATGTTGTATAGTAAGCTCCCTTTAGTGGTTTCTGTTCTCGGTTTATTTGGCCTTGTGTTGTACTTTTTGTCTGATTCCAAATGATTTTGAATTTGGCCTTCTTGTGCAACTCTTACTTTGCCTTTACTTTTTTATTAACCGGAACTTGTTCTTTTCTTTCGACCTTCACCTAATATACATAGTGTAGAAGGAGAAACCTTTAACTGAATATGGAAAATTGCTATTTTATGAGATCCTCACGCTTCGTGCTCAATTACTTGTTCATTATTTATGTTTGTTCCCATTTACTAAGGGTGTGTTTGGATTAACTTTTGAAGTGTTTAATTTTTAAATTAAATCATTTTAAGAGAAATTGAGGTGTTTGGTAACTATTTAAAATAATTTTTCAAAAATGAGTTTTTGCAATAAAATATTTTAGAGAGAACACTTGGAACCAAATTTTAGGAAAAGAGATTATTTGGTGCTTAACCGGAAATTCCTCTCAAATTTTAAGCATATGCTAAAATGACTAAACTACCCTTGCATTAACCCACCTCTCCCATCCACACTCCAAGAAAATAGTTGTTGACTTTATTTAATGAATTTTAAATCTTAAATTTTTTAAAAACAACAATAGAAATAGATAATTTTCAACAAATTTCAAATCTTAAATCTTATAATTTAATGAATCCCTCCAAAATTTTAGAAGGGATTACTGAAATGACTAAAATTTATGTATTATGGTTGGAGATGAAATTGTTTTATTATGATTATGTATTTAAATTTCAAGTTAGACGTGCTTCTATAATTCTGTAGTCCAAAAATATTTTATTTTTAACACAAGAAAATTATAAAATTAATGTTTAGTTTTTAGTTCATAATATTTCATAGACCTTTGTGGTAATTTGACATTAATATAAACACTTAGGTTGAACAAACCAAACAAAAATGTGTATATGAACACTTATGAAAAAATATAACAAAAAaTTATGGTGTTTAAACTATAAACAATTTTTCGAAAAAaTGCTAAAAAGAAAATGCATCTTTTGAAAACATATTTTTTCATAGACAATCCAAACGCACCCTAGTTTGATGATTGTACTGGCTCAAGTTGAGTTCTAAACTGCACTATTGGTAGTTATGTATTACGTAACAGTTAAGTTTCTGTGGGTACCTTTTTTGCTTTTGTTCTAATATATTTGTTTTAATGTATTTGATATGCATCAATTGCATGCCATTATTTTTtCTCTGTATCTTAAGATTATTTGCCATTGATCTTGATTCACCTGCAGTTGTACCTGTGGATTTGAAGCAGACTATACAGGTTGATGAAGATCTTCAAATTCGTGCTTACTATGCTGGACATGTAAAGCCTCTTTTGACACATTTCGTTTTCTTATTTTGCATCTCCTAATATAGCTTCATTTAGAGGTGGCTGACAATATTTCTCATGGGTGGTAGACATGTCCTATGTGTTGGCTTGTTCTAAATTTCATCCTTGTTTCATTACTCAACTCTGAATTTCATCCTGTCATTTACTTCTTTCTCTTTCTATGCTTTTTACCCAATACTAGCAAGTAGCAACCTTTATATTAATTTAGGTTGGAGGGGATCTTGTAACTTCCTTGGTTATGATATATCTTCCCTCTAGCCCCTAAGAAAAGTTATTTAAAATATTTAAAGATTTAAAAAaAAAaTACTTATGGCCATAATTGCAGTAGAAAAGCTTCAAAACACGAAGCTTCTTTTGTTTTtGTTTACCAATGGCATTTGGAGACCTTTAAGAGCATTTTCAAATGTAGCATTATGAACAAAAATATAGCCAAAGTTTAGATTATCTCAATGATAGACATTGATAGACTTCTATTAGTGTATTGATAGATATTGATAAAAGTCTACTAACATCTATTTATCATTAATAGAATTTGAAATTTTGTAAATATTTTCAGCAATTTTGCCATTTACAATAGTTTTCCAGCTCATTGCCCATTGTTGACCAAGTCCTCCCTGTCACTGTCTATTGTCCACTTGAATTGTGGTTAATGGTCATCTAATCCTTGAAGAAAATATAGAACGTGACCCCTTTAGTTTGACTAATTGATAAGGGCAAAGCAAGAAACAAGCTCAACCAAAGGATAAGAAACTCTCCGTCCCCACCTTTCTTCACTAGCTTAGACTTTGAAACCTCATTACGGTGGGATTtCCTTTTTtGTATGAAAATTAGCTATTGATTAGAAAGAACTAATGGTAGAAATATCAAAATCAGATTAACTAACCCAGTTTAAATATTGTTGTTTCCTGTAATTACTTTTTtCTGTGGGAAAATATTGAAATTGTAACTGATTAGCATGATGGGGTCGAGGAAGTTAATTTTGATGTAATTAAAACTTCAAATCTCGTCAATAAAACTACTACCAAGTCATTTTTTATACTGCCAACTCCAAATCTTGATTTGTACTTGGTGATCATTGAATTTTCTGTCTCTTTGCTGCTAAAATCTAAAGCGGTTAACATATAGAGCCGTCAGCAAGGCACTGTTGAAGAAAGAACCAGGAGGACCATTTGTGAAACTCAACATTGAGGAAGTGAACAATTTGATAAGATCCACATTTTCATTAGTATCTTCTTAATTACACGAAAAAGCTTTTAAATATTTTAAATAACTTTTCTTTATTTTTTAAATGGAGTTTATTTTATTTTCCAACTCATCCCATATAATTGACACATCATCTAATACAATTAACTTCTACATCAACACATATCGGTCTAGTGAGCATTTTGTTAACTTCAAGTTAAATCGGGGACCATTTAGAAGCATTAAAAAAaCTTGAGGAACTAAAAACTTTAGGGACCAAATAAACATGAACTCCAAATCTAGGGACCAAAAGACCATTTTTTCATTAAAACAAAAAAGGAGTTTTCAAATGGATGAGATTTGAAAATCTTCTGTATTTTCAATTTGAAATTGATGAATGATTATtAATTTTTTGTTTTTCTTCTAATTTCTTTTCTTTTCTTTTTCTTTTTTttGTTTtGGagggggggggtggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttGGTGtGGGGGGTTGGCTTGCAAATATGGAAGCTCAACGAACCATTTAATGAAAAAACAACTGATGACTGTGCTTTCTATGGAATTCTATCTAGTTTCCTAGAATATTCTGTATGTGAATGTAAGTTCACGTGTTGGTACATATGTATTTATTtCACAAGAAATAAGACGTAAATAAGAAGGATAACATTGTTAAGGATGCAGTTTGAGTGTTGCTAATCAACAAATTCCATTGCCCATTGGATATGATGTGACAAACTGGTGATAGATTGAGTTAGAAATTGTAACCTTTTGTTTTTTTGTGCTTTTCAAATGGAAAATTTTACATGTTAATTTTTCTTGTTTATGTCGGATGTGGGAAAAAGTAAATCCAGTTATTAGTTGCTTGCTGTGTATGTGCATCTTTTGTGGACATATGTTGTTCTACTAGCAACTTACGCATGAATTATAGCCCAGAATTGTAGACTTAGTTCTTAATATTTCCATTATATCCACTGTAAATGATTCTTTGACTTCTGTTCAAAGTTTTTTCTTGTTGCTTCACGTATTCTCCATCAGCACTTCAACTGTCAATGCGGAATGTGCATATTTATATTTCAATCATGTTCTTAAGGTTTTAGGAGCTGCCATGTTTTATGCTAAAGTTGGAGATGCTGCTATGGTATACACAGGAGACTATAATATGACACCTGATAGACATCTGGGAGCAGCTCAAATTGATCGAATGCAATTAGACCTTCTTATAACAGAGTAAGAAGTGAACATAAACTTTTTCCAATTTTTTATCTCTTTTTCAGAGGAAAGCAATGCAGTAACATTGAATCCATTATCTAATATTTTACCCAGAAATAAATGGTTTCAATTTTTATCTTCTAAGCATAGCTTAACTTCTTAAGACTTTGTATCTGTTTTCGTTCAAATATTCACTCTCACGTTACTGAATTCAAAAAGTAGGGACAGAGGAACTTTCTTTACTTACCCAGAACCTAGGTGATGTGCATTTTAAATGATCCCTAAGGCACATCAAATGCTAGGAATTGAGTGACCATTAAGAATAGGAATTTAATGTCATCATACACCTATGACCTATTTGTAAACTGTATATGAAAAATAATGGCGGTCATAATGTAGTATGCTACCTCTAATGGGTTTGGATTGGACTTGGAAATAAATGGGTTTTAATGCTCCCATCAAGTTGGGTTATAAATGTTGATCGAACTAACCAGTCCTGATGTAGCCTATATCAAAGACTAGAATTGTGTTTTGTTTTGGTAATTTCAATTAACTGTTTAATTAGTAGTTAGTTAGGAATTAGTCTCAATAACTAACTAAGAGAGGTCATGTGTTCAATCCATGGTGGCCACCTACCCGAGAATTAATTTCTTACGAGTTTCCTTCACACTCAAATGTTGTAAGATTAGTCGTGTATGCCTGTGAGACTAGTCAAGTTGTGCGCATGGACACTCATGGATAAAAAAAaGAAATAGTAGTTAGTTAGGAATTAGTTTGACGGTTTGCAAAGTAGTATAAAGAACTAGCCATTGCTTTGATAGGTTGTTTCTTAGATAGATCGGTTGGAGGGGTTTGACTTGTAGAACTAAATACTATGTTTTTtACTTTTtGGGATGGGAAACAATAGAATAACCAGTCATTGATATGATGAAATAGGATACAAAAGGTCCAATGTTCTATTTACAAAAAGCACCGCAATTGATTAATGAGCGCTGTAAGGCTATAATGACAAAAGAAAAATAGGTGACAATTTGTTTCAATTGATTGCTAAAAGTGATGTACCTTCTATAAAATAGCCTGTCACAGTCCTTGTCCAAAAGATGCAAGCATCTTTGCCCATTTTAGAGTTGCCAAGGTCAAATAAAAGACCCACCTTGAGATTTTTTTAGTTTTATCTTGAAAATGTTTCTCCTTTTTGCAACTACAAGGTCAAGATACTAGGTTTATATCGATAAAATGAAAAGTTCCTAATACTCTAGGGATGCCAACTCCTCAAGGGAGTGAAATAAAAGAACCAAAAATGAAAACAGTGAATTGCAACTAATCGACACCTCTTTCAGAATTCTGCTCAAGCTTCTTATGCTCATTTTCACTTGGCTTGTCTCAAGTCTTTTTCTTGGTGTTCTCTTCCGATGAATTTTGAAGTGCTCTCAATTCAGGATATACATAGTGGTTGCAATGCTTGCATTATTCCTTTTTAGTTCTATTTTTTTGTTTGTCTTTATTTTTTGTATCCTTGTATTTGTTTTAGCGGCAGTCTCTTTTCATTCCCTTAATGAAAAGTGTTGTATCATTTTAAAAAAAGCAATAAAAGAAATAAAAAGTGAGTTACAACTAAGCTACATAGTTTCATACTCAATTGGAGAAGTTTCTTCTTATTTCATTGGATGAGATCCTGTGCCTTCTTTTTGTATAATTTCATACTATCAATGAAATTTTATCCAATAGAAAATGTCGGGTATGGACTCGAAAGTAATCACATAGATGTGGAAATAAGTCCACTGCCTTTCCCATTTTTACTAAACTTTATTTATGGTCTTCCAGTTAAATAGAGGAGATTTCCCTGTTTCTGATGCTTTTTCATCTGGCATGGTACGTTAACATTTGTGTTCTGCAAAATATTTCTAAAGTTAATCTTTCAATGTTTGTCTTGCAGGTCTACATATGCAACAACCATACGTGATTCTAAATATGCCCGCGAGAGAGAATTTCTTAAAGCTGTATGTATAAATTAAACTATTAAAACTCTTCACTCGGACTTTCCTTTTCTGCACCTCGTTTTTAATTAGACATCGGATAAGCCGGCTTTTTATTCATGTTATTCATGCATATTGGCATTATAATAATTCAGGAGTAGGACATAATTATGGTAAAGTTGAATCATGCCCAATTCCAACTTGGTATATAGTTGAAATTAGGGATAGCTTCAAATAATATATTTTACGTCCCTTGGTGAAGGGAATAAAATATTTGGTTTTGTTTTAGCTCCTGTTTTGTTTTAGGGTTTATTTTGTGATGGTTCAAGATTATAGGTTGGTTGATGGCTTTCTGTGTAGGATATTGCATGTTACAATTGTAGACTAACTAATCATAGTTGAAGGCCAAGATATAAGATAGATACTGATTAGTCGAGGTACACATAAGCTAGTCCAAACACTCACAGATATAAAAAGATGATAGATACTGTTTATGGCTTATGGCTATTAAGCATTGATTGGTGACTTAAATCCATTCTATACTGTAAATTGTTAAATATATACTGAATTATTTGAACTTTAAAATTCATAATTTTTAGCAATGGAATTATCTGAACAAGATCTTTTCCCGTACCATTTGATGTAGGTTCATAATTGTTTGGCTAGTGGAGGGAAGGTCCTTATTCCTACTTTTGCGCTTGGACGGGCTCAGGTACTTTACTGAACGTTAGGTGTGGCTTTTAAATCTTTTACTGCAATCTGCATCTCTCATACTGAATTTGCGCATGTTATATAATACTATTTCAGTTTTGTTATAAAATTTTCTGTTTGAGCAGGAACTTTGTGTCTTGTTGGATGACTATTGGGAGCGCATGAATCTGAAGTTTCCGATCTATGTTTCAGCAGGTCTCCTTTGAATATTAAACTACTTCATCCTTTTAGATATCATATAGCAACTTTTTAGCTTCCTATTTCCTCTTTACGATTTCCAATGTCTTGTAAGTCCATGGTCTGCTTCAATAATCTTCTGCCTATAATTTATTGATAAATTTGAGATGTTTGTTAGAAATTTATTGAGAACCGCAATTGAGCTGTTATGATTCATTATTGAGTGTTTTGCTCGATTAGAACATCTAGTACACCCTTCAATGAGCTCAGCCCATTGATGTAAGAAGAATGGTTTAATTAGGTAATAGTCTAGGTTAATTTTCTTTTTACTCCCGCTTATATTAAATCTCTGTATATATGAGTCTTCCCCCTCATATGTGAACAATTACTGACTAAGACATCTACTCTAAGAATTCTCCAAGATTCGTAGTTTACTTCACCCATCCTTCTATTTGACTCATAAATGATGGTGAAGATTTAGATAGGAAATTGAACTACATTGATGGCTTGATATTCATTTGCTTGGTGAGTTAGAGCCAACGGTCGATGAACTATGTGTTTAAAACCCTTTATTGGCTTTGAGGATTGAAGGGGCGATGCTTGGTGGGCTATTAGCCATTGTTGTTGCTGCCTGCTGGTAGAACTTATGTATATAAAGCTTTTGCTTCTTTTACCACTATTATTGATAGTGCAAGTTTTTTTtCCTTGCGTTTTCTCATGAATAAAATGAATCCACTACAATAATGATGACAGTGGTTCTTTTGGTCCATCATTGATGAAGAAAGATATGGAAATGGAAGAAGCGATTATACTTTCTCTTTCCAACAGTACGAATTTTAAATTATTGGCTCATTGAAATCTCTTTTCATTTTCAATATGTGAATTGACGCAGTATACATGTAAGAACTATAACTGGAGGACCAGACTAAATGAAACTTTAGCACCATCCGGTAGACCACCATGAGAAACAGTTGACACCGATAGCTACTAAATATGTTTCTTTAAAATTGTTTGGAATTATTACGTTTCACAAATACTTTTTCTCATTCTGTTCTCTTCTATTAGTAGTGCTGTTCTTGACCTTTACATTCTTGTGTTCGTATTTATGCTTCCAGGTTTGACTGTTCAAGCTAATATGTACTATAAAATGCTCATTAGTTGGACAAGCCAGAAGGTCAAAGAGACGTACACTACAAGGAATGCATTTGACTTCAAAAATGGTACTGTTTCTTCACATGTTTCAAGTTTTCAGGATTGCAAACAATTGCTTCTTAAAAATATAACCTTAAACTCTTGTTCTAGAGTATCTTGCCTTCTGAATCAGCCTTTTGCTCCAATCAGTATTTGCTCAATCAAGGTCTATTATTTTGTTTTGTATTCGGCTTGCTGCCTTGCTTATGTTTCTGTTTTGGATAGTTTGTTTGGCCTTGTATTGTGGCTTTTAAACTCTTGTTTGGCCTTGTTTTATGGCCTTTGTTTGGCTCTTGTATTGCTTTTAGAAACATGGTATTtAGGTTTTTTTTTttCCGCTTTTTTGGATGTGATGAGGGTGCTAAGGGGGTGTGTCTGGGTGCGCCTGCTGATCCCCCTCCTATTACTCTTGTATAACCCTCATTGAGCTCTGTCTCTCTATTTTCAATATTAATAATAGTGAGACTCGTATCCTTTTAAAAAAAAAAAaTGTTTTTATGTTGAGCTTATTTGCTTACCGGTGAAGTGATGTGGGCATCCCAATTGAAGTGGTAGGTGGGGATATTTTTCAATATCGAGGTATTTTACCTTAGCAATGAATAAATGAAGAGGAAATTAAGTGGCATCTTTGGAAGGGATTTTTTATGCCAAAATTACTTTCCTCTTCATTTATTCATTGTTAAGGTATGATGCTTCAATACTTGATAAATGTCCCAACCTGCCATTTCCCAAATCAGTTTTGTTTTGTTTCGAGACAATGATGCTTGGTGTAGAGTGATTTTGATAAAATCCAAATTGATATAATCTAAGTAACCTCAAGGAGAAATCCTCCGAGAATCAAAGTTATGGATTTTTTATTAGAATAAATAATGTGCTTCATACAAGAGAAGTTTCCTATTTATAGAGTTCTATTGGTAAAAAGGGAATTAAACTAGAATATTACCTAATTACCCAATTAACCTATAGTCTTCTTACATCACAAATACTTTGACGGAATTCTAGGCATAGTAGATAGAAGGTAATTTTAGTATGTGATTGCCTAAGAATCCCTTAAGGATCAGTTACGAAGTGTAATGCCTTTAGAAATCTGAAAATTAACATTTAAAAATTTAAATGTGTGGAATCAAGCATTGAGGTTATTATTAAATGCCCCTTTTATATAATCATGTATAAACAAAGCGTTGTTGCTAAAAACACTTATTCTAAACTCTCTATACCAAACATGGCTTTATGACTTTTTATAAACCCTAAACTCTAAGATTTATTTGATTTTTCTGGTCTGTTACTATGTTTCTCTTTGGGTTTGGATTTTGAAGACCTTTTGTAATTATTCTCTAGGAACGATTTTGCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTGGAACCCCTTGTAATGGGTCAAGCTCCTTTTTGTGGTCTTGGTGTTTTGTATGCCTATGTGTTCTTGCATTTTTTCTCGATGAAAGTGGTTTTTTCACTAAAAAAATCACTTTTATAAGTTTAAATTGAATCATGTTCTTAAATCACTAAGTATGCCCTGACTACGAGTAAATTTGGACAGAACACATTTCTCCCACTTCTGTGGGTGACTTCTGTTGGATTCGAAGTCTAATTACACATCACATGTGTCATATGACATTTTAGCCACTGACGAAGTGCTTATGTAAATTATGAACTTGGGCTACATGTTGCAGTTCAAAAGTTCGACCGTTCTATGATTGATGCGCCTGGACCTTGTGTTCTCTTTGCTACACCAGGGATGATCAGTAGTGGGTTTTCTCTTGAAGTTTTTAAGCGTTGGGCACCTTCTAAATTGAATCTGATCACATTACCTGGGTATTGACTACTCTCTTTTGGCTAATGCTTTGTCTTCATTTTTCAAGTGTACTTTTGCAGGCTGGTTCTTTGATAAACCATAAGGGCATTCAATTTATGTGACTGAGTTTTTTCTTTCACTTTTGCAGCtACTTTTttTTTtCTTTTCTCTTACTTATTTTTATTATTCTAAAATTTGCTTATGTTGTTCATAGTTCGTGTTTGGTCATGTATAGGATGGTCTTACATCCAAGCATAATGTGAATTTGAAATTGCCATCTGTAAGCCATATTACTTTACCTTATGTAGGTATTGTGTTGCTGGAACTGTTGGACACAAGTTAATGTCAGGTAAACCCACCAAAATTGATCTGGACAAGGTCACTCAAATTGATGTGCAATGCCAGGCTAGTATCTACCTGACCTTATGTTGTGTTTTTCTTTTTAAATATTATTATTCGTTTATTAGAATCATTAATCCTCAGCTTTCCTTAACTGGGTGAAAATTGCATCTCAATTTGGATTTTAATGTTTCTTAGAGGTTCACAACTTGGTAGTTTTTGATGCTTCACAAACACCTCATAATATCGCCTCTTTGGACTATTATTCACCTAAGGAAAAACTAGGAAGACACAACTAAGTTACAATGAATGGTGCAATGGTGCTAGCGTTCTTGTATTTCAGATTGAAGACGTTTTTAACTTCTTTGTTTTTGTCCCCAGGAAAGTTAAAAATTATCACAACCTCTCAAATTTATATGTTCCACCTTTTTACCCTCAGATTTGAAGCATGTCCACATGGGGAAGACTTGTGAACGAAAATTTTGATCAATTAGATGCACCCATTTTGGAAGATAATGAAACATTGGATATCAAATTAGTTGGGATCACGTCTTCTATCGGTTTAGGTTAAATTTAATATTTACAATCTTACCGATGTAATTATTACTAACTTAGAAGCTTAAAAGTTTATGTATCAAACTTGACTTTCTATTAATTACTACTAAACTGAGAAGATAGGAAGCTTTGCCTCAAGCAATCTCATAACGATCCTATCCACAAAGGGCTTCGTTCTGAATAATTATTTAGTTCCTTCCAAAACCAAGGTTTTGAGAGAATCACTTCGGCTCCATTTACCTACAAAAGGGGAGGAACAACTTTTAAATAAAGCCTCCAAAATATGCGTTAGTTCTAAATTGTACTAAAAATCAGAAGCTTAAAAGGTTATGTCAATGAGATTGGTTAAATTAAATCTTTTTAATAATTCCAATATATTTCTAAGCTTAGAGTTAGAAATTAACACGAGACTCAATAAGTGAACTCTAAATGTTAATGAGATTAGAAAAGATGTGACTCTGGAGTTTGAACTCAGATGTTCTATTTGATATCAATTTAGATTGTATATATGTGTGTTACATATGCATATGTATATATTTGTGTGTATATACATGCATACATGCTATGCATATTTATATCATGACGAGGAATATAATATAGTGTCATCTTTTGTTGGAGGGTAGCAAATAAATAGAAAAACTCCAAAATAAATAACAGTAGCATATAAGGGATACAATATGGACGTTGAGAAATAGATGAAAGGCCTCTTTTTGAGTATGTACGTGAGAATGTGAGATGAGGTTCTGATAATTGGCAAGCGAATCAATATATATTTTATTATTTTTAAATGGACAAACAACTTAGGCAACTGGATGAATTCAGATATGTGAATGAAAATGGGACTAAAATATGGATAAAATGCTGAATGTGGAAAACTCTAGCTCAAGTACAGGGAATGTTTCTGGATTTAACCAATATTAAGTATCGATATTGAAGTTGACTTGGCTGAACATTTttTTTtCTTTTATTATGCATGTATTCTTTCTACAGTCGTATTGGTTGTATTCAATTTTCCTGACTATATATATGTTTAATTCCAGGTTCACCAACTGGCATTCAGCCCACATACTGATTCCAAAGGAATTATGGATCTTGTGAAATTCCTTAGTCCCAAGCATGTGATTCTTGTACATGGAGAGAAACCTAAAATGGCTGTTTTAAAGGAGAGGATTCATTCTGAACTGGGAATCCCATGTCATGATCCTGCAAATAATGAAACCGTATCCATATCTTCAACACTTTCTGTCAAAGCAGAAGCCTCAAGCATGTTTATTCAGAGTTGTTCAACTCCTAATTTTAAGTTCTTAAAAAGAAACTTGATTGATCCTGATTTAAAAGATTTAAGTTACAAAGCAGAAAGAACTTCAAACATGCTTATACGCGAATGCTCAAATCCCCATTTCAAGCATTTGAAAAGAAATTTGGACGCCAAGTTTGATTCTAGTTTAAGTTGTGGTCCAGCGCTACAGGTAAGTGATGATAGAGTAAATGAAGGGATCTTGGTGATGGAAAATGGTAAAAAAaCCAAGGCATTACATCAGGATGAACTATTGCTACTCTTGGGACAACAAGAGCATGAGGTCAGGTTTGCTCATTGTAGACCCATATACTTTGGTAGCTTAGATGAGATCCATGTTATGGATAGCTTATCTAGAAAATCTCTATGGCTTTCCCAACTATCTTTTAAGCTTTCAACCGAACTTTCAGACAGGAATGTTCAAAATCTTGGGGAGTATCTTCAAGTTGAATCAATTACACTGTCCATTTGCTCAAAGGAAAATTGCCCTTACAGAACTATAGATAGAATTAAAAATGAATCTACTGCTATGGTATTTTGTTGCTGTAGTTGGCTAGTTGCAGATGAAATCCTTGCATGGAAAATCATTTCTATCTTGGAGAAACATGATCTCGGTTCAACATGA

mRNA sequence

GTATCCAACAATGGCATTGGCTCCTATAACGTTGGAGGACTATCGAAAAGTGATGGTTGATCGAAGGGGTGAAGCAGAACAATTTACTAATGACCATATTATGGAGTGCTTGAAAAAAGTTGTACCTGTGGATTTGAAGCAGACTATACAGGTTGATGAAGATCTTCAAATTCGTGCTTACTATGCTGGACATGTTTTAGGAGCTGCCATGTTTTATGCTAAAGTTGGAGATGCTGCTATGGTATACACAGGAGACTATAATATGACACCTGATAGACATCTGGGAGCAGCTCAAATTGATCGAATGCAATTAGACCTTCTTATAACAGAGTCTACATATGCAACAACCATACGTGATTCTAAATATGCCCGCGAGAGAGAATTTCTTAAAGCTGTTCATAATTGTTTGGCTAGTGGAGGGAAGGTCCTTATTCCTACTTTTGCGCTTGGACGGGCTCAGGAACTTTGTGTCTTGTTGGATGACTATTGGGAGCGCATGAATCTGAAGTTTCCGATCTATGTTTCAGCAGGTTTGACTGTTCAAGCTAATATGTACTATAAAATGCTCATTAGTTGGACAAGCCAGAAGGTCAAAGAGACGTACACTACAAGGAATGCATTTGACTTCAAAAATGTTCAAAAGTTCGACCGTTCTATGATTGATGCGCCTGGACCTTGTGTTCTCTTTGCTACACCAGGGATGATCAGTAGTGGGTTTTCTCTTGAAGTTTTTAAGCGTTGGGCACCTTCTAAATTGAATCTGATCACATTACCTGGGTATTGTGTTGCTGGAACTGTTGGACACAAGTTAATGTCAGGTAAACCCACCAAAATTGATCTGGACAAGGTCACTCAAATTGATGTGCAATGCCAGGTTCACCAACTGGCATTCAGCCCACATACTGATTCCAAAGGAATTATGGATCTTGTGAAATTCCTTAGTCCCAAGCATGTGATTCTTGTACATGGAGAGAAACCTAAAATGGCTGTTTTAAAGGAGAGGATTCATTCTGAACTGGGAATCCCATGTCATGATCCTGCAAATAATGAAACCGTATCCATATCTTCAACACTTTCTGTCAAAGCAGAAGCCTCAAGCATGTTTATTCAGAGTTGTTCAACTCCTAATTTTAAGTTCTTAAAAAGAAACTTGATTGATCCTGATTTAAAAGATTTAAGTTACAAAGCAGAAAGAACTTCAAACATGCTTATACGCGAATGCTCAAATCCCCATTTCAAGCATTTGAAAAGAAATTTGGACGCCAAGTTTGATTCTAGTTTAAGTTGTGGTCCAGCGCTACAGGTAAGTGATGATAGAGTAAATGAAGGGATCTTGGTGATGGAAAATGGTAAAAAAACCAAGGCATTACATCAGGATGAACTATTGCTACTCTTGGGACAACAAGAGCATGAGGTCAGGTTTGCTCATTGTAGACCCATATACTTTGGTAGCTTAGATGAGATCCATGTTATGGATAGCTTATCTAGAAAATCTCTATGGCTTTCCCAACTATCTTTTAAGCTTTCAACCGAACTTTCAGACAGGAATGTTCAAAATCTTGGGGAGTATCTTCAAGTTGAATCAATTACACTGTCCATTTGCTCAAAGGAAAATTGCCCTTACAGAACTATAGATAGAATTAAAAATGAATCTACTGCTATGGTATTTTGTTGCTGTAGTTGGCTAGTTGCAGATGAAATCCTTGCATGGAAAATCATTTCTATCTTGGAGAAACATGATCTCGGTTCAACATGA

Coding sequence (CDS)

ATGGCATTGGCTCCTATAACGTTGGAGGACTATCGAAAAGTGATGGTTGATCGAAGGGGTGAAGCAGAACAATTTACTAATGACCATATTATGGAGTGCTTGAAAAAaGTTGTACCTGTGGATTTGAAGCAGACTATACAGGTTGATGAAGATCTTCAAATTCGTGCTTACTATGCTGGACATGTTTTAGGAGCTGCCATGTTTTATGCTAAAGTTGGAGATGCTGCTATGGTATACACAGGAGACTATAATATGACACCTGATAGACATCTGGGAGCAGCTCAAATTGATCGAATGCAATTAGACCTTCTTATAACAGAGTCTACATATGCAACAACCATACGTGATTCTAAATATGCCCGCGAGAGAGAATTTCTTAAAGCTGTTCATAATTGTTTGGCTAGTGGAGGGAAGGTCCTTATTCCTACTTTTGCGCTTGGACGGGCTCAGGAACTTTGTGTCTTGTTGGATGACTATTGGGAGCGCATGAATCTGAAGTTTCCGATCTATGTTTCAGCAGGTTTGACTGTTCAAGCTAATATGTACTATAAAATGCTCATTAGTTGGACAAGCCAGAAGGTCAAAGAGACGTACACTACAAGGAATGCATTTGACTTCAAAAATGTTCAAAAGTTCGACCGTTCTATGATTGATGCGCCTGGACCTTGTGTTCTCTTTGCTACACCAGGGATGATCAGTAGTGGGTTTTCTCTTGAAGTTTTTAAGCGTTGGGCACCTTCTAAATTGAATCTGATCACATTACCTGGGTATTGTGTTGCTGGAACTGTTGGACACAAGTTAATGTCAGGTAAACCCACCAAAATTGATCTGGACAAGGTCACTCAAATTGATGTGCAATGCCAGGTTCACCAACTGGCATTCAGCCCACATACTGATTCCAAAGGAATTATGGATCTTGTGAAATTCCTTAGTCCCAAGCATGTGATTCTTGTACATGGAGAGAAACCTAAAATGGCTGTTTTAAAGGAGAGGATTCATTCTGAACTGGGAATCCCATGTCATGATCCTGCAAATAATGAAACCGTATCCATATCTTCAACACTTTCTGTCAAAGCAGAAGCCTCAAGCATGTTTATTCAGAGTTGTTCAACTCCTAATTTTAAGTTCTTAAAAAGAAACTTGATTGATCCTGATTTAAAAGATTTAAGTTACAAAGCAGAAAGAACTTCAAACATGCTTATACGCGAATGCTCAAATCCCCATTTCAAGCATTTGAAAAGAAATTTGGACGCCAAGTTTGATTCTAGTTTAAGTTGTGGTCCAGCGCTACAGGTAAGTGATGATAGAGTAAATGAAGGGATCTTGGTGATGGAAAATGGTAAAAAAaCCAAGGCATTACATCAGGATGAACTATTGCTACTCTTGGGACAACAAGAGCATGAGGTCAGGTTTGCTCATTGTAGACCCATATACTTTGGTAGCTTAGATGAGATCCATGTTATGGATAGCTTATCTAGAAAATCTCTATGGCTTTCCCAACTATCTTTTAAGCTTTCAACCGAACTTTCAGACAGGAATGTTCAAAATCTTGGGGAGTATCTTCAAGTTGAATCAATTACACTGTCCATTTGCTCAAAGGAAAATTGCCCTTACAGAACTATAGATAGAATTAAAAATGAATCTACTGCTATGGTATTTTGTTGCTGTAGTTGGCTAGTTGCAGATGAAATCCTTGCATGGAAAATCATTTCTATCTTGGAGAAACATGATCTCGGTTCAACATGA

Protein sequence

MALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAREREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVFKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAEASSMFIQSCSTPNFKFLKRNLIDPDLKDLSYKAERTSNMLIRECSNPHFKHLKRNLDAKFDSSLSCGPALQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRPIYFGSLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENCPYRTIDRIKNESTAMVFCCCSWLVADEILAWKIISILEKHDLGST*

Homology

[Close]

BLAST of Cucsa.318910 vs. Swiss-Prot
Match: CPS3B_ARATH (Cleavage and polyadenylation specificity factor subunit 3-II OS=Arabidopsis thaliana GN=CPSF73-II PE=1 SV=2)

HSP 1 Score: 619.4 bits (1596), Expect = 4.0e-176
Identity = 322/573 (56.20%), Postives = 394/573 (68.76%), Query Frame = 1


Query: 2   ALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGH 61
           AL+P+ LEDYR+VMVDRRGE E FT  HI  C+KKV+ +DLKQTIQVDEDLQIRAYYAGH
Sbjct: 97  ALSPLMLEDYRRVMVDRRGEEELFTTTHIANCMKKVIAIDLKQTIQVDEDLQIRAYYAGH 156

Query: 62  VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAR 121
           VLGA M YAK+GDAA+VYTGDYNMT DRHLGAA+IDR+QLDLLI+ESTYATTIR SKY R
Sbjct: 157 VLGAVMVYAKMGDAAIVYTGDYNMTTDRHLGAAKIDRLQLDLLISESTYATTIRGSKYPR 216

Query: 122 EREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANM 181
           EREFL+AVH C+A GGK LIP+FALGRAQELC+LLDDYWERMN+K PIY S+GLT+QANM
Sbjct: 217 EREFLQAVHKCVAGGGKALIPSFALGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANM 276

Query: 182 YYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVF 241
           YYKMLISWTSQ VKE + T N FDFKNV+ FDRS+I APGPCVLFATPGM+ +GFSLEVF
Sbjct: 277 YYKMLISWTSQNVKEKHNTHNPFDFKNVKDFDRSLIHAPGPCVLFATPGMLCAGFSLEVF 336

Query: 242 KRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDSK 301
           K WAPS LNL+ LPGY VAGTVGHKLM+GKPT +DL   T++DV+C+VHQ+AFSPHTD+K
Sbjct: 337 KHWAPSPLNLVALPGYSVAGTVGHKLMAGKPTTVDLYNGTKVDVRCKVHQVAFSPHTDAK 396

Query: 302 GIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAEA 361
           GIMDL KFLSPK+V+LVHGEKP M +LK                     I+S L +    
Sbjct: 397 GIMDLTKFLSPKNVVLVHGEKPSMMILK-------------------EKITSELDIPC-- 456

Query: 362 SSMFIQSCSTPNFKFLKRNLIDPDLKDLSYKAERTSNMLIRECSNPHFKHLKRNLDAKFD 421
                         F+  N         +Y     S+M ++ CSNP+FK         F 
Sbjct: 457 --------------FVPANGETVSFASTTYIKANASDMFLKSCSNPNFK---------FS 516

Query: 422 SSLSCGPALQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRPIYFGS 481
           +S      L+V+D R  +G+LV+E  KK K +HQDE+  +L ++ H V  AHC P+    
Sbjct: 517 NSTQ----LRVTDHRTADGVLVIEKSKKAKIVHQDEISEVLHEKNHVVSLAHCCPVKVKG 576

Query: 482 LDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENCPYRTI 541
             E   +D        + QLS K+   +S   +      LQV S   S+C K+ C +R+ 
Sbjct: 577 ESEDDDVD-------LIKQLSAKILKTVSGAQIHESENCLQVASFKGSLCLKDKCMHRS- 610

Query: 542 DRIKNESTAMVFCCCSWLVADEILAWKIISILE 575
               + S+  VF CC+W +AD  L W+II+ ++
Sbjct: 637 ---SSSSSEAVFLCCNWSIADLELGWEIINAIK 610

[Close]

BLAST of Cucsa.318910 vs. Swiss-Prot
Match: INT11_DICDI (Integrator complex subunit 11 homolog OS=Dictyostelium discoideum GN=ints11 PE=3 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 7.5e-130
Identity = 234/470 (49.79%), Postives = 323/470 (68.72%), Query Frame = 1


Query: 2   ALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGH 61
           A+ PI LEDYRK+ V+++GE   FT   I +C+KKV+PV+L QTI+VDE+L I+AYYAGH
Sbjct: 97  AICPILLEDYRKITVEKKGETNFFTAQMIKDCMKKVIPVNLHQTIKVDEELSIKAYYAGH 156

Query: 62  VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAR 121
           VLGAAMFYAKVGD ++VYTGDYNMTPDRHLG+A ID+++ D+LITE+TYATTIRDSK  R
Sbjct: 157 VLGAAMFYAKVGDESVVYTGDYNMTPDRHLGSAWIDQVKPDVLITETTYATTIRDSKRGR 216

Query: 122 EREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNL-KFPIYVSAGLTVQAN 181
           ER+FLK +H C+  GGKVLIP FALGR QELC+L+D YWE+MNL   PIY SAGL  +AN
Sbjct: 217 ERDFLKRIHECVEKGGKVLIPVFALGRVQELCILIDSYWEQMNLGHIPIYFSAGLAEKAN 276

Query: 182 MYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEV 241
           +YYK+ I+WT+QK+K+T+  RN FDFK+++ F   ++DAPG  VLFATPGM+ +G SLEV
Sbjct: 277 LYYKLFINWTNQKIKQTFVKRNMFDFKHIKPFQSHLVDAPGAMVLFATPGMLHAGASLEV 336

Query: 242 FKRWAPSKLNLITLPGYCVAGTVGHKLMS--------GKPTK--IDLDKVTQIDVQCQVH 301
           FK+WAP++LN+  +PGYCV GTVG+KL++         KP    +++DK T I+V+C++H
Sbjct: 337 FKKWAPNELNMTIIPGYCVVGTVGNKLLTTGSDQQQQSKPQSQMVEIDKKTTIEVKCKIH 396

Query: 302 QLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVS 361
            L+FS H D+KGI+ L+K  +P++VILVHGEK KM  L ++I  E+G+ C+ PAN  T+ 
Sbjct: 397 NLSFSAHADAKGILQLIKMSNPRNVILVHGEKEKMGFLSQKIIKEMGVNCYYPANGVTII 456

Query: 362 ISSTLSVKAEASSMFIQSCSTPNFKFLKRNLIDPDLKDLSYKAERTSNMLIRECSNPHFK 421
           I +  S+  + S              LKR ++D       Y  +  +N L    +  +  
Sbjct: 457 IDTMKSIPIDIS-----------LNLLKRQILD-------YSYQYNNNNLNNFNNFNNLN 516

Query: 422 HLKRNLDAKFDSSLSCGPALQVSDDRVNEGILVMENGKKTKALHQDELLL 461
           +L  N +   ++S      L++ D + N   L + N    K   Q  +++
Sbjct: 517 NLNNNNNNNNNNS------LKLIDIKNNTSTLFINNNNNNKKKQQSVVVV 542

[Close]

BLAST of Cucsa.318910 vs. Swiss-Prot
Match: INT11_DANRE (Integrator complex subunit 11 OS=Danio rerio GN=cpsf3l PE=2 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.0e-123
Identity = 207/361 (57.34%), Postives = 280/361 (77.56%), Query Frame = 1


Query: 2   ALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGH 61
           A+ PI LED+RK+ VD++GE   FT+  I +C+KKVVP++L QT+QVD++L+I+AYYAGH
Sbjct: 98  AICPILLEDFRKITVDKKGETNFFTSQMIKDCMKKVVPLNLHQTVQVDDELEIKAYYAGH 157

Query: 62  VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAR 121
           VLGAAM   KVG  ++VYTGDYNMTPDRHLGAA ID+ + D+LI+ESTYATTIRDSK  R
Sbjct: 158 VLGAAMVQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPDILISESTYATTIRDSKRCR 217

Query: 122 EREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANM 181
           ER+FLK VH  +  GGKVLIP FALGRAQELC+LL+ +WERMNLK PIY S GLT +AN 
Sbjct: 218 ERDFLKKVHETVERGGKVLIPVFALGRAQELCILLETFWERMNLKAPIYFSTGLTEKANH 277

Query: 182 YYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVF 241
           YYK+ I+WT+QK+++T+  RN F+FK+++ FDRS  D PGP V+FATPGM+ +G SL++F
Sbjct: 278 YYKLFITWTNQKIRKTFVQRNMFEFKHIKAFDRSYADNPGPMVVFATPGMLHAGQSLQIF 337

Query: 242 KRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDSK 301
           K+WA ++ N++ +PGYCV GTVGHK+++G+  K++++    +DV+ QV  ++FS H D+K
Sbjct: 338 KKWAGNEKNMVIMPGYCVQGTVGHKILNGQ-KKLEMEGRATLDVKLQVEYMSFSAHADAK 397

Query: 302 GIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAEA 361
           GIM L++   P++++LVHGE  KM  LK++I  E  I C  PAN ET +I +  SV  + 
Sbjct: 398 GIMQLIRMAEPRNMLLVHGEAKKMEFLKDKIEQEFSISCFMPANGETTTIVTNPSVPVDI 457

Query: 362 S 363
           S
Sbjct: 458 S 457

[Close]

BLAST of Cucsa.318910 vs. Swiss-Prot
Match: INT11_CHICK (Integrator complex subunit 11 OS=Gallus gallus GN=CPSF3L PE=2 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 1.4e-123
Identity = 209/361 (57.89%), Postives = 280/361 (77.56%), Query Frame = 1


Query: 2   ALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGH 61
           A+ PI LEDYRK+ VD++GE   FT+  I +C+KKVV V L QT+QVDE+L+I+AYYAGH
Sbjct: 98  AICPILLEDYRKITVDKKGETNFFTSQMIKDCMKKVVAVHLHQTVQVDEELEIKAYYAGH 157

Query: 62  VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAR 121
           VLGAAMF  KVG  ++VYTGDYNMTPDRHLGAA ID+ + DLLITESTYATTIRDSK  R
Sbjct: 158 VLGAAMFQIKVGCESVVYTGDYNMTPDRHLGAAWIDKCRPDLLITESTYATTIRDSKRCR 217

Query: 122 EREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANM 181
           ER+FLK VH  +  GGKVLIP FALGRAQELC+LL+ +WERMNLK PIY S GLT +AN 
Sbjct: 218 ERDFLKKVHETVERGGKVLIPVFALGRAQELCILLETFWERMNLKAPIYFSTGLTEKANH 277

Query: 182 YYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVF 241
           YYK+ I+WT+QK+++T+  RN F+FK+++ FDR+  D PGP V+FATPGM+ +G SL++F
Sbjct: 278 YYKLFITWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATPGMLHAGQSLQIF 337

Query: 242 KRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDSK 301
           ++WA ++ N++ +PGYCV GTVGHK++SG+  K++++    ++V+ QV  ++FS H D+K
Sbjct: 338 RKWAGNEKNMVIMPGYCVQGTVGHKILSGQ-RKLEMEGRQILEVKMQVEYMSFSAHADAK 397

Query: 302 GIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAEA 361
           GIM L++   P++V+LVHGE  KM  LK++I  E  + C+ PAN ET +I +  S+  + 
Sbjct: 398 GIMQLIRQAEPRNVLLVHGEAKKMEFLKQKIEQEFHVNCYMPANGETTTIFTNPSIPVDI 457

Query: 362 S 363
           S
Sbjct: 458 S 457

[Close]

BLAST of Cucsa.318910 vs. Swiss-Prot
Match: INT11_PONAB (Integrator complex subunit 11 OS=Pongo abelii GN=CPSF3L PE=2 SV=2)

HSP 1 Score: 444.1 bits (1141), Expect = 2.3e-123
Identity = 209/356 (58.71%), Postives = 279/356 (78.37%), Query Frame = 1


Query: 2   ALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGH 61
           A+ PI LEDYRK+ VD++GEA  FT+  I +C+KKVV V L QT+QVD++L+I+AYYAGH
Sbjct: 98  AICPILLEDYRKIAVDKKGEANFFTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGH 157

Query: 62  VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAR 121
           VLGAAMF  KVG  ++VYTGDYNMTPDRHLGAA ID+ + +LLITESTYATTIRDSK  R
Sbjct: 158 VLGAAMFQIKVGSESVVYTGDYNMTPDRHLGAAWIDKCRPNLLITESTYATTIRDSKRCR 217

Query: 122 EREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANM 181
           ER+FLK VH  +  GGKVLIP FALGRAQELC+LL+ +WERMNLK PIY S GLT +AN 
Sbjct: 218 ERDFLKKVHETVERGGKVLIPVFALGRAQELCILLETFWERMNLKVPIYFSTGLTEKANH 277

Query: 182 YYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVF 241
           YYK+ I WT+QK+++T+  RN F+FK+++ FDR+  D PGP V+FATPGM+ +G SL++F
Sbjct: 278 YYKLFIPWTNQKIRKTFVQRNMFEFKHIKAFDRAFADNPGPMVVFATPGMLHAGQSLQIF 337

Query: 242 KRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDSK 301
           ++WA ++ N++ +PGYCV GTVGHK++SG+  K++++    ++V+ QV  ++FS H D+K
Sbjct: 338 RKWAGNEKNMVIMPGYCVQGTVGHKILSGQ-RKLEMEGRQVLEVKMQVEYMSFSAHADAK 397

Query: 302 GIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSV 358
           GIM LV    P+ V+LVHGE  KM  LK++I  EL + C+ PAN ETV++ ++ S+
Sbjct: 398 GIMQLVGQAEPESVLLVHGEAKKMEFLKQKIEQELRVSCYMPANGETVTLPTSPSI 452

[Close]

BLAST of Cucsa.318910 vs. TrEMBL
Match: A0A0A0LQW3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G435430 PE=4 SV=1)

HSP 1 Score: 1170.2 bits (3026), Expect = 0.0e+00
Identity = 581/581 (100.00%), Postives = 581/581 (100.00%), Query Frame = 1


Query: 1   MALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAG 60
           MALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAG
Sbjct: 96  MALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAG 155

Query: 61  HVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYA 120
           HVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYA
Sbjct: 156 HVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYA 215

Query: 121 REREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQAN 180
           REREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQAN
Sbjct: 216 REREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQAN 275

Query: 181 MYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEV 240
           MYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEV
Sbjct: 276 MYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEV 335

Query: 241 FKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDS 300
           FKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDS
Sbjct: 336 FKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDS 395

Query: 301 KGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAE 360
           KGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAE
Sbjct: 396 KGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAE 455

Query: 361 ASSMFIQSCSTPNFKFLKRNLIDPDLKDLSYKAERTSNMLIRECSNPHFKHLKRNLDAKF 420
           ASSMFIQSCSTPNFKFLKRNLIDPDLKDLSYKAERTSNMLIRECSNPHFKHLKRNLDAKF
Sbjct: 456 ASSMFIQSCSTPNFKFLKRNLIDPDLKDLSYKAERTSNMLIRECSNPHFKHLKRNLDAKF 515

Query: 421 DSSLSCGPALQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRPIYFG 480
           DSSLSCGPALQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRPIYFG
Sbjct: 516 DSSLSCGPALQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRPIYFG 575

Query: 481 SLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENCPYRT 540
           SLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENCPYRT
Sbjct: 576 SLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENCPYRT 635

Query: 541 IDRIKNESTAMVFCCCSWLVADEILAWKIISILEKHDLGST 582
           IDRIKNESTAMVFCCCSWLVADEILAWKIISILEKHDLGST
Sbjct: 636 IDRIKNESTAMVFCCCSWLVADEILAWKIISILEKHDLGST 676

[Close]

BLAST of Cucsa.318910 vs. TrEMBL
Match: Q6E435_CUCME (ACT11D09.9 OS=Cucumis melo GN=ACT11D09.9 PE=4 SV=1)

HSP 1 Score: 1124.8 bits (2908), Expect = 0.0e+00
Identity = 567/585 (96.92%), Postives = 571/585 (97.61%), Query Frame = 1


Query: 1   MALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAG 60
           MALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAG
Sbjct: 128 MALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAG 187

Query: 61  HVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYA 120
           HVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYA
Sbjct: 188 HVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYA 247

Query: 121 REREFLKAVHNCLASGGKVLIPTFALGRAQ-ELCVLLDDYWERMNLKFPIYVSAGLTVQA 180
           REREFLKAVHNCLASGGKVLIPTFALGRAQ ELCVLLDDYWERMNLKFPIYVSAGLTVQA
Sbjct: 248 REREFLKAVHNCLASGGKVLIPTFALGRAQQELCVLLDDYWERMNLKFPIYVSAGLTVQA 307

Query: 181 NMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLE 240
           NMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLE
Sbjct: 308 NMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLE 367

Query: 241 VFKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTD 300
           VFKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDK TQIDV    HQLAFSPHTD
Sbjct: 368 VFKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKDTQIDV----HQLAFSPHTD 427

Query: 301 SKGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKA 360
           SKGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLS+KA
Sbjct: 428 SKGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSIKA 487

Query: 361 EASSMFIQSCSTPNFKFLKRNL---IDPDLKDLSYKAERTSNMLIRECSNPHFKHLKRNL 420
           EASSMFIQSCSTPNFKFLKRNL   IDPDLKDLSYKA RTSNMLIRECSNPHFKHL RNL
Sbjct: 488 EASSMFIQSCSTPNFKFLKRNLIDKIDPDLKDLSYKAVRTSNMLIRECSNPHFKHLNRNL 547

Query: 421 DAKFDSSLSCGPALQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRP 480
           DAKFDSSLS GP LQVSDDRVNEGILVMENGKKTKALHQDELLLLLG+QEHEVRFAHCRP
Sbjct: 548 DAKFDSSLSGGPELQVSDDRVNEGILVMENGKKTKALHQDELLLLLGEQEHEVRFAHCRP 607

Query: 481 IYFGSLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENC 540
           IYFGSLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENC
Sbjct: 608 IYFGSLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENC 667

Query: 541 PYRTIDRIKNESTAMVFCCCSWLVADEILAWKIISILEKHDLGST 582
           PYRT +RI+NESTAMVFCCCSWLVADEILAWKIISILEKHDLGST
Sbjct: 668 PYRTTNRIENESTAMVFCCCSWLVADEILAWKIISILEKHDLGST 708

[Close]

BLAST of Cucsa.318910 vs. TrEMBL
Match: A0A061E8Z1_THECC (Cleavage and polyadenylation specificity factor 73 kDa subunit-II OS=Theobroma cacao GN=TCM_011055 PE=4 SV=1)

HSP 1 Score: 805.1 bits (2078), Expect = 5.8e-230
Identity = 408/585 (69.74%), Postives = 468/585 (80.00%), Query Frame = 1


Query: 2   ALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGH 61
           ALAP+ LEDYRK M DRRGE  QFT+DHI EC+KKV+PVDLKQT+QVD+DLQIRAYYAGH
Sbjct: 97  ALAPLMLEDYRKNM-DRRGEDGQFTSDHITECMKKVIPVDLKQTVQVDKDLQIRAYYAGH 156

Query: 62  VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAR 121
           VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDR+QLDLLITESTYATTIRDS+Y R
Sbjct: 157 VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRLQLDLLITESTYATTIRDSRYGR 216

Query: 122 EREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANM 181
           EREFLKAVHNC+A+GGKVLIPTFALGRAQELC+LL+DYWERMNLK PIY S+GLT+QANM
Sbjct: 217 EREFLKAVHNCVAAGGKVLIPTFALGRAQELCILLEDYWERMNLKVPIYFSSGLTIQANM 276

Query: 182 YYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVF 241
           YYKMLI+WTSQK+KETY T NAFDFKNVQ FDRS+I+APGPCVLFATPGMIS GFSLEVF
Sbjct: 277 YYKMLINWTSQKIKETYATHNAFDFKNVQNFDRSLINAPGPCVLFATPGMISGGFSLEVF 336

Query: 242 KRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDSK 301
            +WAPS++NLITLPGYCVAGT+GHKLMSGKPTKIDLDK TQ+DV+CQ+HQL+FSPHTD+K
Sbjct: 337 MQWAPSEINLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQVDVRCQIHQLSFSPHTDAK 396

Query: 302 GIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAEA 361
           GIMDLVKFLSPKH ILVHGEKPKMA LKERI SELGI C+ PANN+TV+I +T  VKA+A
Sbjct: 397 GIMDLVKFLSPKHAILVHGEKPKMATLKERIQSELGIQCYCPANNDTVTIPTTHYVKADA 456

Query: 362 SSMFIQSCSTPNFKFLKRNLIDPDLKDLSYKAERTSNMLIRECSNPHFKHLKRNLDAKFD 421
           S  FI+SC  PNFKF K + +D      SY     S  +                     
Sbjct: 457 SDAFIKSCLNPNFKFSKSSSVDK-----SYSGSNDSKAI--------------------- 516

Query: 422 SSLSCGPALQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRPIYFGS 481
                 P LQVSD+RV EGILV+E GKK K +HQDELL +LG+ +HEV+FA+C P+    
Sbjct: 517 ------PGLQVSDERVAEGILVVEKGKKAKVIHQDELLHMLGENKHEVQFAYCFPMRTER 576

Query: 482 LDEIHVMDSLSR--------KSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSK 541
           L++    D  S         K   +S LS KLS ELSD N+Q+LGE LQVES  LSIC K
Sbjct: 577 LEKTRSEDLPSADDLLCGLDKCTLISLLSTKLSNELSDGNIQDLGEQLQVESFCLSICLK 636

Query: 542 ENCPYRTIDRIKNESTAMVFCCCSWLVADEILAWKIISILEKHDL 579
           +NCP+R  D ++N+S  +VF CCSW VADE+LAWKIISI++ + L
Sbjct: 637 DNCPHRISDSLQNDS-EVVFFCCSWSVADEMLAWKIISIMKNYTL 647

[Close]

BLAST of Cucsa.318910 vs. TrEMBL
Match: M5XX69_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002557mg PE=4 SV=1)

HSP 1 Score: 797.0 bits (2057), Expect = 1.6e-227
Identity = 407/584 (69.69%), Postives = 463/584 (79.28%), Query Frame = 1


Query: 2   ALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGH 61
           ALAPI LEDYRKVMV+RRGE EQF++DHI EC+KKV+PVDLKQT+QVD+DLQIRAYYAGH
Sbjct: 100 ALAPIMLEDYRKVMVERRGEEEQFSSDHIAECMKKVIPVDLKQTVQVDKDLQIRAYYAGH 159

Query: 62  VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAR 121
           VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQI+R+ LDLLI+ESTY TTIRDSKYAR
Sbjct: 160 VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIERLNLDLLISESTYGTTIRDSKYAR 219

Query: 122 EREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANM 181
           EREFL+AVH C+A GGKVLIPTFALGRAQELC+LL+DYWERMNLK PIY SAGLT+QANM
Sbjct: 220 EREFLRAVHKCVAGGGKVLIPTFALGRAQELCILLEDYWERMNLKVPIYFSAGLTLQANM 279

Query: 182 YYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVF 241
           YYKMLISWTSQKVKETY+TRNAFDFKN  KFDRSMI+APGPCVLFATPGMIS GFSLEVF
Sbjct: 280 YYKMLISWTSQKVKETYSTRNAFDFKNAHKFDRSMINAPGPCVLFATPGMISGGFSLEVF 339

Query: 242 KRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDSK 301
           K WAPS++NL+TLPGYCVAGT+GHKLMSGKPTKIDLDK TQIDV+CQ+H L+FSPHTD+K
Sbjct: 340 KHWAPSEMNLVTLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVRCQIHHLSFSPHTDAK 399

Query: 302 GIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAEA 361
           GIMDL+KFLSPK+VILVHGEKPKMA LK +I SELGI CHDPANNETVSISST  VKA A
Sbjct: 400 GIMDLIKFLSPKNVILVHGEKPKMATLKGKIQSELGIQCHDPANNETVSISSTHYVKALA 459

Query: 362 SSMFIQSCSTPNFKFLKRNLIDPDLKDLSYKAERTSNMLIRECSNPHFKHLKRNLDAKFD 421
           S  FI+SCS PNFKF K           S + E  SN       N +F            
Sbjct: 460 SDAFIRSCSNPNFKFSKS----------SQEDEHGSN-----SRNNNFT----------- 519

Query: 422 SSLSCGPALQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRPIYFGS 481
                 P L+VSD+RV EG+LVME  KK K +HQDELLL+LG+++H+V+FA+C P   G 
Sbjct: 520 ------PRLRVSDERVAEGVLVMERNKKAKVVHQDELLLMLGEKKHQVQFAYCCPADIGH 579

Query: 482 LDEIHVMDSLSRK-------SLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKE 541
           L E     +   +       S  L QLS KLS E S  N+Q+  ++LQVES  +SIC K 
Sbjct: 580 LGETKSSTTNDGQLCKSETCSRLLRQLSAKLSNEFSQGNIQDFEDHLQVESFHVSICLKN 639

Query: 542 NCPYRTIDRIKNESTAMVFCCCSWLVADEILAWKIISILEKHDL 579
           NCPYR +D ++N+S    F CCSW  ADE LAWKIISI +  ++
Sbjct: 640 NCPYRLMD-VQNKSQEAAFFCCSWGTADEKLAWKIISICQNFNV 650

[Close]

BLAST of Cucsa.318910 vs. TrEMBL
Match: B9HVV0_POPTR (Metallo-beta-lactamase family protein OS=Populus trichocarpa GN=POPTR_0010s11650g PE=4 SV=2)

HSP 1 Score: 750.4 bits (1936), Expect = 1.7e-213
Identity = 378/557 (67.86%), Postives = 445/557 (79.89%), Query Frame = 1


Query: 2   ALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGH 61
           ALAP+ LED+RKV+VDRRGE EQFT+ HI +C++KV+ VDLKQT+QVD+DLQIRAYYAGH
Sbjct: 97  ALAPLMLEDFRKVLVDRRGEEEQFTSLHISQCMEKVIAVDLKQTVQVDDDLQIRAYYAGH 156

Query: 62  VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAR 121
           VLGAAMFYAKVGD+AMVYTGDYNMTPDRHLGAAQIDR++LDLLITESTYATTIRDSKYAR
Sbjct: 157 VLGAAMFYAKVGDSAMVYTGDYNMTPDRHLGAAQIDRLELDLLITESTYATTIRDSKYAR 216

Query: 122 EREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANM 181
           EREFLKAVH C+A GGKVLIPTFALGRAQELC+LLDDYWERMNLK PIY SAGLT+QAN+
Sbjct: 217 EREFLKAVHECVAGGGKVLIPTFALGRAQELCILLDDYWERMNLKVPIYFSAGLTIQANL 276

Query: 182 YYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVF 241
           YYK+LISWTSQKVKETY TRNAFDFK+V  FDRS+I+APGPCVLFATPGMIS GFSLEVF
Sbjct: 277 YYKILISWTSQKVKETYATRNAFDFKHVHNFDRSLINAPGPCVLFATPGMISGGFSLEVF 336

Query: 242 KRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDSK 301
           K+WAP ++NLITLPGYCVAGTVGHKLMSGKPTKI+LDK TQIDV+CQ+HQL+FSPHTDSK
Sbjct: 337 KQWAPCEMNLITLPGYCVAGTVGHKLMSGKPTKINLDKDTQIDVRCQIHQLSFSPHTDSK 396

Query: 302 GIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAEA 361
           GIMDL KFLSP++VILVHGEKPKM  LKERI +EL IPC+ PAN + V I ST+ VKA A
Sbjct: 397 GIMDLTKFLSPRNVILVHGEKPKMVSLKERIQTELRIPCYLPANCDAVHIPSTIYVKAHA 456

Query: 362 SSMFIQSCSTPNFKFLKRNLIDPDLKDLSYKAERTSNMLIRECSNPHFKHLKRNLDAKFD 421
           S+ FI+SC  PNF+FLKR+             E  S+ ++R  +NP              
Sbjct: 457 SNTFIRSCLNPNFRFLKRS------------KEDNSDQVLRN-TNP-------------- 516

Query: 422 SSLSCGPALQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRPIYFGS 481
                   LQV+D+RV EGIL+ME GKK + +HQD+LLL+L Q++H+V+FA+C      +
Sbjct: 517 -----TAPLQVNDERVAEGILIMEKGKKARVVHQDDLLLMLRQKKHDVQFAYCCAAQLDN 576

Query: 482 LDEIHVMD---SLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENCPY 541
           L+E    D    LS K   L  L  +LS   S  N+++LGE+LQVES  +S+C K+NCPY
Sbjct: 577 LEETRNRDDALGLSDKCSSLQLLFKELSNYFSGVNIEDLGEHLQVESFHVSVCLKDNCPY 621

Query: 542 RTIDRIKNESTAMVFCC 556
           R ID  + E+  + FCC
Sbjct: 637 RIIDNSQKEAVTVYFCC 621

[Close]

BLAST of Cucsa.318910 vs. TAIR10
Match: AT2G01730.1 (AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II)

HSP 1 Score: 619.4 bits (1596), Expect = 2.3e-177
Identity = 322/573 (56.20%), Postives = 394/573 (68.76%), Query Frame = 1


Query: 2   ALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGH 61
           AL+P+ LEDYR+VMVDRRGE E FT  HI  C+KKV+ +DLKQTIQVDEDLQIRAYYAGH
Sbjct: 97  ALSPLMLEDYRRVMVDRRGEEELFTTTHIANCMKKVIAIDLKQTIQVDEDLQIRAYYAGH 156

Query: 62  VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAR 121
           VLGA M YAK+GDAA+VYTGDYNMT DRHLGAA+IDR+QLDLLI+ESTYATTIR SKY R
Sbjct: 157 VLGAVMVYAKMGDAAIVYTGDYNMTTDRHLGAAKIDRLQLDLLISESTYATTIRGSKYPR 216

Query: 122 EREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANM 181
           EREFL+AVH C+A GGK LIP+FALGRAQELC+LLDDYWERMN+K PIY S+GLT+QANM
Sbjct: 217 EREFLQAVHKCVAGGGKALIPSFALGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANM 276

Query: 182 YYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVF 241
           YYKMLISWTSQ VKE + T N FDFKNV+ FDRS+I APGPCVLFATPGM+ +GFSLEVF
Sbjct: 277 YYKMLISWTSQNVKEKHNTHNPFDFKNVKDFDRSLIHAPGPCVLFATPGMLCAGFSLEVF 336

Query: 242 KRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDSK 301
           K WAPS LNL+ LPGY VAGTVGHKLM+GKPT +DL   T++DV+C+VHQ+AFSPHTD+K
Sbjct: 337 KHWAPSPLNLVALPGYSVAGTVGHKLMAGKPTTVDLYNGTKVDVRCKVHQVAFSPHTDAK 396

Query: 302 GIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAEA 361
           GIMDL KFLSPK+V+LVHGEKP M +LK                     I+S L +    
Sbjct: 397 GIMDLTKFLSPKNVVLVHGEKPSMMILK-------------------EKITSELDIPC-- 456

Query: 362 SSMFIQSCSTPNFKFLKRNLIDPDLKDLSYKAERTSNMLIRECSNPHFKHLKRNLDAKFD 421
                         F+  N         +Y     S+M ++ CSNP+FK         F 
Sbjct: 457 --------------FVPANGETVSFASTTYIKANASDMFLKSCSNPNFK---------FS 516

Query: 422 SSLSCGPALQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRPIYFGS 481
           +S      L+V+D R  +G+LV+E  KK K +HQDE+  +L ++ H V  AHC P+    
Sbjct: 517 NSTQ----LRVTDHRTADGVLVIEKSKKAKIVHQDEISEVLHEKNHVVSLAHCCPVKVKG 576

Query: 482 LDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENCPYRTI 541
             E   +D        + QLS K+   +S   +      LQV S   S+C K+ C +R+ 
Sbjct: 577 ESEDDDVD-------LIKQLSAKILKTVSGAQIHESENCLQVASFKGSLCLKDKCMHRS- 610

Query: 542 DRIKNESTAMVFCCCSWLVADEILAWKIISILE 575
               + S+  VF CC+W +AD  L W+II+ ++
Sbjct: 637 ---SSSSSEAVFLCCNWSIADLELGWEIINAIK 610

[Close]

BLAST of Cucsa.318910 vs. TAIR10
Match: AT1G61010.1 (AT1G61010.1 cleavage and polyadenylation specificity factor 73-I)

HSP 1 Score: 208.8 bits (530), Expect = 9.3e-54
Identity = 119/337 (35.31%), Postives = 183/337 (54.30%), Query Frame = 1


Query: 2   ALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGH 61
           A+  + L DY KV      E   F    I + + K+  +D  QT++V+  ++   Y AGH
Sbjct: 111 AIYKLLLTDYVKVS-KVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVN-GIKFWCYTAGH 170

Query: 62  VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAR 121
           VLGAAMF   +    ++YTGDY+   DRHL AA++ +   D+ I EST    +  S++ R
Sbjct: 171 VLGAAMFMVDIAGVRILYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIR 230

Query: 122 EREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMN--LKFPIYVSAGLTVQA 181
           E+ F   +H+ +A GG+VLIP FALGRAQEL ++LD+YW         PIY ++ L  + 
Sbjct: 231 EKRFTDVIHSTVAQGGRVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKC 290

Query: 182 NMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDR-SMIDAPGPCVLFATPGMISSGFSL 241
              Y+  I   + +++  +   N F FK++   +     +  GP V+ ATPG + SG S 
Sbjct: 291 MAVYQTYILSMNDRIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSR 350

Query: 242 EVFKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHT 301
           ++F  W   K N   +PGY V GT+  K +  +P ++ L       +  QVH ++FS H 
Sbjct: 351 QLFDSWCSDKKNACIIPGYMVEGTLA-KTIINEPKEVTLMNGLTAPLNMQVHYISFSAHA 410

Query: 302 DSKGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSE 336
           D       +K L P ++ILVHGE  +M  LK+++ +E
Sbjct: 411 DYAQTSTFLKELMPPNIILVHGEANEMMRLKQKLLTE 444

[Close]

BLAST of Cucsa.318910 vs. TAIR10
Match: AT5G23880.1 (AT5G23880.1 cleavage and polyadenylation specificity factor 100)

HSP 1 Score: 114.8 bits (286), Expect = 1.8e-25
Identity = 74/260 (28.46%), Postives = 127/260 (48.85%), Query Frame = 1


Query: 25  FTNDHIMECLKKVVPVDLKQTIQVD---EDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTG 84
           FT D I    + V+ +   Q   +    E + I  + AGH+LG +++        ++Y  
Sbjct: 114 FTLDDIDSAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAV 173

Query: 85  DYNMTPDRHLGAAQIDR-MQLDLLITESTYAT-TIRDSKYAREREFLKAVHNCLASGGKV 144
           DYN   +RHL    +   ++  +LIT++ +A  T + ++  R++EFL  +   L  GG V
Sbjct: 174 DYNHRKERHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNV 233

Query: 145 LIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANMYYKMLISWTSQKVKETYT 204
           L+P    GR  EL ++L+ +W +    FPIY    ++     Y K  + W S  + +++ 
Sbjct: 234 LLPVDTAGRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFE 293

Query: 205 TR--NAFDFKNVQ-KFDRSMID--APGPCVLFATPGMISSGFSLEVFKRWAPSKLNLITL 264
           T   NAF  ++V    +++ +D   PGP V+ A+   + +GF+ E+F  WA    NL+  
Sbjct: 294 TSRDNAFLLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLF 353

Query: 265 PGYCVAGTVGHKLMSGKPTK 275
                 GT+   L S  P K
Sbjct: 354 TETGQFGTLARMLQSAPPPK 373

[Close]

BLAST of Cucsa.318910 vs. NCBI nr
Match: gi|778673818|ref|XP_011650067.1| (PREDICTED: cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Cucumis sativus])

HSP 1 Score: 1170.2 bits (3026), Expect = 0.0e+00
Identity = 581/581 (100.00%), Postives = 581/581 (100.00%), Query Frame = 1


Query: 1   MALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAG 60
           MALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAG
Sbjct: 96  MALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAG 155

Query: 61  HVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYA 120
           HVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYA
Sbjct: 156 HVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYA 215

Query: 121 REREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQAN 180
           REREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQAN
Sbjct: 216 REREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQAN 275

Query: 181 MYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEV 240
           MYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEV
Sbjct: 276 MYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEV 335

Query: 241 FKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDS 300
           FKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDS
Sbjct: 336 FKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDS 395

Query: 301 KGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAE 360
           KGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAE
Sbjct: 396 KGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAE 455

Query: 361 ASSMFIQSCSTPNFKFLKRNLIDPDLKDLSYKAERTSNMLIRECSNPHFKHLKRNLDAKF 420
           ASSMFIQSCSTPNFKFLKRNLIDPDLKDLSYKAERTSNMLIRECSNPHFKHLKRNLDAKF
Sbjct: 456 ASSMFIQSCSTPNFKFLKRNLIDPDLKDLSYKAERTSNMLIRECSNPHFKHLKRNLDAKF 515

Query: 421 DSSLSCGPALQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRPIYFG 480
           DSSLSCGPALQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRPIYFG
Sbjct: 516 DSSLSCGPALQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRPIYFG 575

Query: 481 SLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENCPYRT 540
           SLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENCPYRT
Sbjct: 576 SLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENCPYRT 635

Query: 541 IDRIKNESTAMVFCCCSWLVADEILAWKIISILEKHDLGST 582
           IDRIKNESTAMVFCCCSWLVADEILAWKIISILEKHDLGST
Sbjct: 636 IDRIKNESTAMVFCCCSWLVADEILAWKIISILEKHDLGST 676

[Close]

BLAST of Cucsa.318910 vs. NCBI nr
Match: gi|659118488|ref|XP_008459147.1| (PREDICTED: cleavage and polyadenylation specificity factor subunit 3-II isoform X1 [Cucumis melo])

HSP 1 Score: 1147.1 bits (2966), Expect = 0.0e+00
Identity = 571/584 (97.77%), Postives = 576/584 (98.63%), Query Frame = 1


Query: 1   MALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAG 60
           MALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAG
Sbjct: 96  MALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAG 155

Query: 61  HVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYA 120
           HVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYA
Sbjct: 156 HVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYA 215

Query: 121 REREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQAN 180
           REREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQAN
Sbjct: 216 REREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQAN 275

Query: 181 MYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEV 240
           MYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEV
Sbjct: 276 MYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEV 335

Query: 241 FKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDS 300
           FKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDK TQIDVQCQVHQLAFSPHTDS
Sbjct: 336 FKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKDTQIDVQCQVHQLAFSPHTDS 395

Query: 301 KGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAE 360
           KGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLS+KAE
Sbjct: 396 KGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSIKAE 455

Query: 361 ASSMFIQSCSTPNFKFLKRNL---IDPDLKDLSYKAERTSNMLIRECSNPHFKHLKRNLD 420
           ASSMFIQSCSTPNFKFLKRNL   IDPDLKDLSYKA RTSNMLIRECSNPHFKHL RNLD
Sbjct: 456 ASSMFIQSCSTPNFKFLKRNLIDKIDPDLKDLSYKAVRTSNMLIRECSNPHFKHLNRNLD 515

Query: 421 AKFDSSLSCGPALQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRPI 480
           AKFDSSLSCGP LQVSDDRVNEGILVMENGKKTKALHQDELLLLLG+QEHEVRFAHCRPI
Sbjct: 516 AKFDSSLSCGPELQVSDDRVNEGILVMENGKKTKALHQDELLLLLGEQEHEVRFAHCRPI 575

Query: 481 YFGSLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENCP 540
           YFGSLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENCP
Sbjct: 576 YFGSLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENCP 635

Query: 541 YRTIDRIKNESTAMVFCCCSWLVADEILAWKIISILEKHDLGST 582
           YRT +RI+NES+AMVFCCCSWLVADEILAWKIISILEKHDLGST
Sbjct: 636 YRTTNRIENESSAMVFCCCSWLVADEILAWKIISILEKHDLGST 679

[Close]

BLAST of Cucsa.318910 vs. NCBI nr
Match: gi|46360445|gb|AAS80153.1| (ACT11D09.9 [Cucumis melo])

HSP 1 Score: 1124.8 bits (2908), Expect = 0.0e+00
Identity = 567/585 (96.92%), Postives = 571/585 (97.61%), Query Frame = 1


Query: 1   MALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAG 60
           MALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAG
Sbjct: 128 MALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAG 187

Query: 61  HVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYA 120
           HVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYA
Sbjct: 188 HVLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYA 247

Query: 121 REREFLKAVHNCLASGGKVLIPTFALGRAQ-ELCVLLDDYWERMNLKFPIYVSAGLTVQA 180
           REREFLKAVHNCLASGGKVLIPTFALGRAQ ELCVLLDDYWERMNLKFPIYVSAGLTVQA
Sbjct: 248 REREFLKAVHNCLASGGKVLIPTFALGRAQQELCVLLDDYWERMNLKFPIYVSAGLTVQA 307

Query: 181 NMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLE 240
           NMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLE
Sbjct: 308 NMYYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLE 367

Query: 241 VFKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTD 300
           VFKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDK TQIDV    HQLAFSPHTD
Sbjct: 368 VFKRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKDTQIDV----HQLAFSPHTD 427

Query: 301 SKGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKA 360
           SKGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLS+KA
Sbjct: 428 SKGIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSIKA 487

Query: 361 EASSMFIQSCSTPNFKFLKRNL---IDPDLKDLSYKAERTSNMLIRECSNPHFKHLKRNL 420
           EASSMFIQSCSTPNFKFLKRNL   IDPDLKDLSYKA RTSNMLIRECSNPHFKHL RNL
Sbjct: 488 EASSMFIQSCSTPNFKFLKRNLIDKIDPDLKDLSYKAVRTSNMLIRECSNPHFKHLNRNL 547

Query: 421 DAKFDSSLSCGPALQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRP 480
           DAKFDSSLS GP LQVSDDRVNEGILVMENGKKTKALHQDELLLLLG+QEHEVRFAHCRP
Sbjct: 548 DAKFDSSLSGGPELQVSDDRVNEGILVMENGKKTKALHQDELLLLLGEQEHEVRFAHCRP 607

Query: 481 IYFGSLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENC 540
           IYFGSLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENC
Sbjct: 608 IYFGSLDEIHVMDSLSRKSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKENC 667

Query: 541 PYRTIDRIKNESTAMVFCCCSWLVADEILAWKIISILEKHDLGST 582
           PYRT +RI+NESTAMVFCCCSWLVADEILAWKIISILEKHDLGST
Sbjct: 668 PYRTTNRIENESTAMVFCCCSWLVADEILAWKIISILEKHDLGST 708

[Close]

BLAST of Cucsa.318910 vs. NCBI nr
Match: gi|590696828|ref|XP_007045271.1| (Cleavage and polyadenylation specificity factor 73 kDa subunit-II [Theobroma cacao])

HSP 1 Score: 805.1 bits (2078), Expect = 8.3e-230
Identity = 408/585 (69.74%), Postives = 468/585 (80.00%), Query Frame = 1


Query: 2   ALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGH 61
           ALAP+ LEDYRK M DRRGE  QFT+DHI EC+KKV+PVDLKQT+QVD+DLQIRAYYAGH
Sbjct: 97  ALAPLMLEDYRKNM-DRRGEDGQFTSDHITECMKKVIPVDLKQTVQVDKDLQIRAYYAGH 156

Query: 62  VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAR 121
           VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDR+QLDLLITESTYATTIRDS+Y R
Sbjct: 157 VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRLQLDLLITESTYATTIRDSRYGR 216

Query: 122 EREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANM 181
           EREFLKAVHNC+A+GGKVLIPTFALGRAQELC+LL+DYWERMNLK PIY S+GLT+QANM
Sbjct: 217 EREFLKAVHNCVAAGGKVLIPTFALGRAQELCILLEDYWERMNLKVPIYFSSGLTIQANM 276

Query: 182 YYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVF 241
           YYKMLI+WTSQK+KETY T NAFDFKNVQ FDRS+I+APGPCVLFATPGMIS GFSLEVF
Sbjct: 277 YYKMLINWTSQKIKETYATHNAFDFKNVQNFDRSLINAPGPCVLFATPGMISGGFSLEVF 336

Query: 242 KRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDSK 301
            +WAPS++NLITLPGYCVAGT+GHKLMSGKPTKIDLDK TQ+DV+CQ+HQL+FSPHTD+K
Sbjct: 337 MQWAPSEINLITLPGYCVAGTIGHKLMSGKPTKIDLDKDTQVDVRCQIHQLSFSPHTDAK 396

Query: 302 GIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAEA 361
           GIMDLVKFLSPKH ILVHGEKPKMA LKERI SELGI C+ PANN+TV+I +T  VKA+A
Sbjct: 397 GIMDLVKFLSPKHAILVHGEKPKMATLKERIQSELGIQCYCPANNDTVTIPTTHYVKADA 456

Query: 362 SSMFIQSCSTPNFKFLKRNLIDPDLKDLSYKAERTSNMLIRECSNPHFKHLKRNLDAKFD 421
           S  FI+SC  PNFKF K + +D      SY     S  +                     
Sbjct: 457 SDAFIKSCLNPNFKFSKSSSVDK-----SYSGSNDSKAI--------------------- 516

Query: 422 SSLSCGPALQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRPIYFGS 481
                 P LQVSD+RV EGILV+E GKK K +HQDELL +LG+ +HEV+FA+C P+    
Sbjct: 517 ------PGLQVSDERVAEGILVVEKGKKAKVIHQDELLHMLGENKHEVQFAYCFPMRTER 576

Query: 482 LDEIHVMDSLSR--------KSLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSK 541
           L++    D  S         K   +S LS KLS ELSD N+Q+LGE LQVES  LSIC K
Sbjct: 577 LEKTRSEDLPSADDLLCGLDKCTLISLLSTKLSNELSDGNIQDLGEQLQVESFCLSICLK 636

Query: 542 ENCPYRTIDRIKNESTAMVFCCCSWLVADEILAWKIISILEKHDL 579
           +NCP+R  D ++N+S  +VF CCSW VADE+LAWKIISI++ + L
Sbjct: 637 DNCPHRISDSLQNDS-EVVFFCCSWSVADEMLAWKIISIMKNYTL 647

[Close]

BLAST of Cucsa.318910 vs. NCBI nr
Match: gi|645229213|ref|XP_008221359.1| (PREDICTED: cleavage and polyadenylation specificity factor subunit 3-II [Prunus mume])

HSP 1 Score: 800.8 bits (2067), Expect = 1.6e-228
Identity = 408/584 (69.86%), Postives = 466/584 (79.79%), Query Frame = 1


Query: 2   ALAPITLEDYRKVMVDRRGEAEQFTNDHIMECLKKVVPVDLKQTIQVDEDLQIRAYYAGH 61
           ALAPI LEDYRKVMV+RRGE EQF++DHI EC+KKV+PVDLKQT+QVD+DLQIRAYYAGH
Sbjct: 100 ALAPIMLEDYRKVMVERRGEEEQFSSDHIAECMKKVIPVDLKQTVQVDKDLQIRAYYAGH 159

Query: 62  VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYAR 121
           VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQI+R+ LDLLI+ESTY TTIRDSKYAR
Sbjct: 160 VLGAAMFYAKVGDAAMVYTGDYNMTPDRHLGAAQIERLNLDLLISESTYGTTIRDSKYAR 219

Query: 122 EREFLKAVHNCLASGGKVLIPTFALGRAQELCVLLDDYWERMNLKFPIYVSAGLTVQANM 181
           EREFL+AVH C+A GGKVLIPTFALGRAQELC+LL+DYWERMNLK PIY SAGLT+QANM
Sbjct: 220 EREFLRAVHKCVAGGGKVLIPTFALGRAQELCILLEDYWERMNLKVPIYFSAGLTLQANM 279

Query: 182 YYKMLISWTSQKVKETYTTRNAFDFKNVQKFDRSMIDAPGPCVLFATPGMISSGFSLEVF 241
           YYKMLISWTSQKVKETY+TRNAFDFKN  KFDRSMIDAPGPCVLFATPGMIS GFSLEVF
Sbjct: 280 YYKMLISWTSQKVKETYSTRNAFDFKNAHKFDRSMIDAPGPCVLFATPGMISGGFSLEVF 339

Query: 242 KRWAPSKLNLITLPGYCVAGTVGHKLMSGKPTKIDLDKVTQIDVQCQVHQLAFSPHTDSK 301
           K WAPS++NL+TLPGYCVAGT+GHKLMSGKPTKIDLDK TQIDV+CQ+H L+FSPHTD+K
Sbjct: 340 KHWAPSEMNLVTLPGYCVAGTIGHKLMSGKPTKIDLDKDTQIDVRCQIHHLSFSPHTDAK 399

Query: 302 GIMDLVKFLSPKHVILVHGEKPKMAVLKERIHSELGIPCHDPANNETVSISSTLSVKAEA 361
           GIMDL+KFLSPK+VILVHGEKPKMA LK +I SELGI C+DPANNETVSISST  VKA A
Sbjct: 400 GIMDLIKFLSPKNVILVHGEKPKMATLKGKIQSELGIQCYDPANNETVSISSTHYVKALA 459

Query: 362 SSMFIQSCSTPNFKFLKRNLIDPDLKDLSYKAERTSNMLIRECSNPHFKHLKRNLDAKFD 421
           S  FI+SCS PNFKF K           S + E  SN       N +F            
Sbjct: 460 SDAFIRSCSNPNFKFSKS----------SQEDEHGSN-----SRNNNFT----------- 519

Query: 422 SSLSCGPALQVSDDRVNEGILVMENGKKTKALHQDELLLLLGQQEHEVRFAHCRPIYFGS 481
                 P L+VSD+RV EG+LVME  KK K +HQDELLL+LG+++H+VRFA+C P+  G+
Sbjct: 520 ------PRLRVSDERVAEGVLVMERNKKAKVVHQDELLLMLGEKKHQVRFAYCCPVDIGN 579

Query: 482 LDEIHVMDSLSRK-------SLWLSQLSFKLSTELSDRNVQNLGEYLQVESITLSICSKE 541
           L E     +   +       S  L QLS KLS E S  N+Q+  ++LQVES  +SIC K 
Sbjct: 580 LGETKSSTTNDGQLCKSETCSRLLRQLSAKLSNEFSQGNIQDFEDHLQVESFHVSICLKN 639

Query: 542 NCPYRTIDRIKNESTAMVFCCCSWLVADEILAWKIISILEKHDL 579
           NCPYR +D ++N+S    F CCSW +ADE LAWKIISI +  ++
Sbjct: 640 NCPYRLMD-VQNKSQEAAFFCCSWGMADEKLAWKIISICQNFNV 650

The following BLAST results are available for this feature:

BLAST of Cucsa.318910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CPS3B_ARATH	4.0e-176	56.20	Cleavage and polyadenylation specificity factor subunit 3-II OS=Arabidopsis thal...	[more]
INT11_DICDI	7.5e-130	49.79	Integrator complex subunit 11 homolog OS=Dictyostelium discoideum GN=ints11 PE=3...	[more]
INT11_DANRE	1.0e-123	57.34	Integrator complex subunit 11 OS=Danio rerio GN=cpsf3l PE=2 SV=1	[more]
INT11_CHICK	1.4e-123	57.89	Integrator complex subunit 11 OS=Gallus gallus GN=CPSF3L PE=2 SV=1	[more]
INT11_PONAB	2.3e-123	58.71	Integrator complex subunit 11 OS=Pongo abelii GN=CPSF3L PE=2 SV=2	[more]

BLAST of Cucsa.318910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQW3_CUCSA	0.0e+00	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G435430 PE=4 SV=1	[more]
Q6E435_CUCME	0.0e+00	96.92	ACT11D09.9 OS=Cucumis melo GN=ACT11D09.9 PE=4 SV=1	[more]
A0A061E8Z1_THECC	5.8e-230	69.74	Cleavage and polyadenylation specificity factor 73 kDa subunit-II OS=Theobroma c...	[more]
M5XX69_PRUPE	1.6e-227	69.69	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002557mg PE=4 SV=1	[more]
B9HVV0_POPTR	1.7e-213	67.86	Metallo-beta-lactamase family protein OS=Populus trichocarpa GN=POPTR_0010s11650...	[more]

BLAST of Cucsa.318910 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01730.1	2.3e-177	56.20	cleavage and polyadenylation specificity factor 73 kDa subunit-II	[more]
AT1G61010.1	9.3e-54	35.31	cleavage and polyadenylation specificity factor 73-I	[more]
AT5G23880.1	1.8e-25	28.46	cleavage and polyadenylation specificity factor 100	[more]

BLAST of Cucsa.318910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778673818\|ref\|XP_011650067.1\|	0.0e+00	100.00	PREDICTED: cleavage and polyadenylation specificity factor subunit 3-II isoform ...	[more]
gi\|659118488\|ref\|XP_008459147.1\|	0.0e+00	97.77	PREDICTED: cleavage and polyadenylation specificity factor subunit 3-II isoform ...	[more]
gi\|46360445\|gb\|AAS80153.1\|	0.0e+00	96.92	ACT11D09.9 [Cucumis melo]	[more]
gi\|590696828\|ref\|XP_007045271.1\|	8.3e-230	69.74	Cleavage and polyadenylation specificity factor 73 kDa subunit-II [Theobroma cac...	[more]
gi\|645229213\|ref\|XP_008221359.1\|	1.6e-228	69.86	PREDICTED: cleavage and polyadenylation specificity factor subunit 3-II [Prunus ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001279	Metallo-B-lactamas
IPR011108	RMMBL
IPR022712	Beta_Casp

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010197	polar nucleus fusion
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.318910.1	Cucsa.318910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001279	Metallo-beta-lactamase	GENE3D	G3DSA:3.60.15.10		coord: 22..164 score: 1.3
IPR001279	Metallo-beta-lactamase	PFAM	PF16661	Lactamase_B_6	coord: 7..97 score: 1.
IPR001279	Metallo-beta-lactamase	unknown	SSF56281	Metallo-hydrolase/oxidoreductase	coord: 2..352 score: 1.47
IPR011108	Zn-dependent metallo-hydrolase, RNA specificity domain	PFAM	PF07521	RMMBL	coord: 283..341 score: 5.6
IPR022712	Beta-Casp domain	PFAM	PF10996	Beta-Casp	coord: 149..267 score: 2.0
IPR022712	Beta-Casp domain	SMART	SM01027	Beta_Casp_2	coord: 149..267 score: 7.8
None	No IPR available	PANTHER	PTHR11203	CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR	coord: 2..400 score: 5.6E
None	No IPR available	PANTHER	PTHR11203:SF37	INTEGRATOR COMPLEX SUBUNIT 11	coord: 2..400 score: 5.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.318910	Cla012977	Watermelon (97103) v1	cgywmB580
Cucsa.318910	ClCG09G016760	Watermelon (Charleston Gray)	cgywcgB551
Cucsa.318910	Lsi10G002420	Bottle gourd (USVL1VR-Ls)	cgylsiB520

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None