Cucsa.318750 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.318750
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Nogo-B receptor
Location	scaffold03076 : 262444 .. 268253 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCTTGGTTTATTTTCATTATCTTTATTTGTCTTTATATTATTTAGTTTTACATTCTGTGAAAGAATAAGCAAAATGCTTATTAGGATCCTAGGGAAATTTTTGGGGCCTAAAACAATGTCTCTAAGATAGCAGCAACCTCGTTCAAATCTTTGTAAACTTCAACTCTACTTTATTCTGAATCATTTTACTTGTATTGTGACAACTTGATTTTTATGTTGTGGTTTTGGTGTACATGAATCAGATGCTTATTTTTTTTTTTCAAGGCTTGCCCAGATTGGACTTCTTGGGCTTCAGCTGATATGGCATTTCCTACACTTCATTGTTAGCGCATTTTACTTTGTGGTTGGTATTGCCACAACACTTGAAAGCTATTTGATATCTTGGGGATTCCCATGCAAGTACAAACATCTTAATATAGACAGGGTCCAATATCTTGCCATTGTGGTCGAAAGTGATGAAGCTTATAATACATTAAAAATGATTGAACTTCTGGAATGGTTAGTATCGTTGGGCATTAGAAGCGTTTGCTTGTATGATGCTGAAGGTAATGATTTTGTGTCTATCCAGAAATTCTGAGCTCTCTTTTATTTTTTGCCAAATGCTTGTGATTGTTTTTTCAAATTTGTTGAATGGTATGCTTATTCAACTGTGTTTTATTTTCAAGGAGTGCTTAAACAGTCCAAGGAAATCATTTTGAAGAAAGTAAAGAATGCGTCTGAATTTCAGGTACATGCAACTATAAGAAAGATTCAAACCTATGGGTTCAGTAAGTGACAAAGTTTTCTGCATTGAACCAAGTGATCCCTAATACTTTGAGGCCCTCTTTTTGAAATATGAATGTAGATTTGTGTATGGTATAATTGTGTTTTTATCAGTCCTTTATCTTTGAGTATTTCTTTCAATGTTCTTTCCTTTTATTAGTTACCTCAGTGGAAATTGTTGAAATTCCTCTTGTATTATATTTACACACTTGGGTCTTTTATTATTTGTTTCTTTTTTGGGAGAAATTATGTTATAGGGAGTTTCTAAGTCTTAGTTGTTGTTAGTTATATATAAATAAATTTACCTTTACCCACTAACTTAAACTTTTGGGTTAATTAGTAATTTAAGATGGCACTAGACAGGTGGTCCAAGAAGGTTTTGTATTCGAGTCCTTGCAATGTTAATTTTCTCCTCAATTAAAATTGATTTCCACTTGTTGAGCCTTTCAAATATTTCAAGCCGCCAAGTGAGGGGGAGCGTAGTGATATATAATTCAATTTACCTTTACCCACTAGCTTAAGCTTTTGGATCAATCGGTGATTTAAGTTGCAAGGTTAATGGTAATGAGATTGCCTTGGGTCCTTGATGGAATAGCATGCTTTTGATTCCATGTGTATTGCTTCTCTTTAGTGAATTAAAGAGGGCTTTTTGAAGTTGTATTTGTTTCTTTGAAGTTGCATATTAATCTTTGCATGAGGTCATTTATTTCTTCAATAGTACGAGTATAACTGCTGCCTTTTGTTTTCTCTTCCAAGTTTACCATAAAAAATGACAGTACTCTGCAATTTGAACTTAGGAGGTGAATGTCAATAATAAGATGTGCATTATTCTTCTAATTTAGTCATTGCCTTCAGGGGATTGACGAACCTCTCCAACTAAACAAAAAAGGCATTACTCTGGAGTTCATTTCAGCTTCTGATGGAAAGGAAGCCATTGCCAGAGCAGCTAATTTTCTTCTTCAAAATAAATGGAGAAAAACCAACATGAGTGGAGACCACAAGCGATGCTTATCTGAATCTCAAATGACCGAGGCTTTAAAAGCAGTTGGTCTGTATTCTTGCTTGTACTTGATAAGGTTCAGAGAACTGTTTTACTCAAATGTTAATTAACCTTACGGACATATATTGGATCCATAATTAGGTTGTGGAGGGCTTGATCCTGACCTCATTTTAGTATACGGGCCTACAAGATGTCACTTTGGGTTTCCTGCATGGAGAATCCGCTACACAGAGATTCTGTGAGTCTTTTTTGTTTATTATATATTTTTTTTCATAAGTAATGACACGTTTTGGTGAGCTGATGAGAAGTACAAAAGGGAAACCAAAATCCTCAATCAGTAGCTAAAAAATGACTACATGAAAAAGTTTAGTTACACTAGGTGGATAATTACATAAAGGTTCTATCGAAGAACCGCAACTCGATGTTCTAAACTTTATGAATGCCCCATGCATCCTCCATGCCCTTGCTTTTAGAGAGAAAAATTGTCTCTCTATTAACAGATTCTAAAGAAGGGCAGCCTCCTTGTGCTTTTCTTTAGGGAGTGTCCACAAAAGTGTTGATTGTTATGCCATCATGGTTCATAAAATTTCAGTAAAGACTAGCCAACATGCGTCAAAGGCCAAGTGGATTTAAGAAATGCCTTTCAATATTCTCAACTTTGAACTCATGCAGCAACAGAATACCAGGTTGGAAGTCCCTCAGAGAAGTCTTAATTCCACCTGCTTTCCTTCTAGTCCTTAGCTTGCATGCCGACGTGCATATCTATGAGATTTATCGTAATTCACCCTATATCTTAACTTTTAAATTCTATCAGACTTCTTGAGCAGGATCTTTTATCTTCTTCTTCTGAAACTCTTTCTCATTCTATCTCATTGTTAGCATCCACGTCTTCTTCTGTCTGTTCATTGCTACCAGCTGTTTATGTATTTGATGAAAATTGGCATTAGTCTTCCACCTTGGTTGCTTGACACTTGACTAGGGAAGCATCATAAAGGTGATTGTTCTGCATAAGACCCCTACCCCTACCCCTACACATGCTAACTCTCTATACAAAACCCGGAGCTGCTAGAAGTAGAATACGACCCATCCGTTGTATGGTCATTCTGTGCTTCGATTCCTTTTATTCCGCCTGTTTTAGCAAAAATACTTCCTTCCAATAGGGAAATGGTGTTTGTTAATGGTTATATTGAACATTTTGAATAATTGTATATCTATACTTATCATAGAAAAACTAATATTTTCCGTTTAAGAAAGCTTATTTAATGGTATGTGATTGTGTGGAACCTTTACTTATGATTTATGAAATAAATCAATTTGTTCATCTGATGAACCAAACACAAAATTTAAGTTATCTAACAAGTTTTCCTACACATTTTTACTTATTTCTTTCTTTCCAAATTTTGCACATCTTGATTTAATGCACTTTCACTTTCTATTGCTGCATAGTTGTATCCTTTCAATGGCAGATTATCAAATTATTAGCAGTAGATTATTGTTTACAATTCCATACATTTTTGTAATAATTTTTGGGGTTGAAGAGAATTGTATGAGCTTCGATGAGATTTACTTGTGTTGTCTTGCAGACACATGGGACCGTTGAAGTCCATGAAGTACGGTTCCTTGCTGAAAGCCATTTACAAGTTTACCAGGGTGCGACAGAACTATGGTGAGTTACCTGCTATTTCCTTAATAAGTTCTAATAAAGTTTATATATCTCCTTTTTATAATGTTATTGCTATATGTTACGATTCTAAATGTTGAACTATGATTTTACAACTGAATTCCATTTTGCTCCTTTTTTCTACAATAAAGGTTTCTTCTGTTTGGTTGAGTGTTTTCAACATTCAAGGACCTAAAAATTTGTTTTTATTTCAGAAATTTAACTGATAATTCAAATGTTTACATTTATAAAAGATGAAAAGCATGATCGTGATGGAAACGTCCTAGTTTCCAAAAACCAAATAGTTATTGAATGTTGGCTTTTATCGATCGATCGAATCTTGTATAATAGTTTTGAAAGCGTCCTAGCTAGTCTTACCACATGTCCATTTAATAACCATTTGAATTTTTTATTTTCATAACAAAAGCCTATTCACGGAATTGTTTGTAGTTCAAACTCAACAACAATAATTTTGTTTTACTTCAACATAAAAAATCACAATATTTTAATAAGCTAAGTTATTTGTTTAAGTTGTAACTTATTATTTTCTACATTCAGTAGGAAGTTATAAGTAGGTTACGTTTCAATTTTTGAAGGTAGTGAGTGACTAATGTTAATTATGTGATGGCTTCAATAGGTAAATGAACTGAAGCATCGTGCAGCGATGGAAAGCCAATGAAACAAGGACAAGATTTTCTCATTTGAACAGTCATGGATTTAGTTTTATGAATCGAATCCAAGGGTTTTGTCATTTCATTACTCTTTTAATTACTGTAAAGAATTCATAAACAATATAGGCAACTATATAAAATTCATCAACCCTAAACAATATAGTTTTATGTATTTATTTATTTATTATTATTATTATAACTTTTTATGTTTTTTTTTTTGTTAAATTAGATATTGGTGAAATGTTCAAGTACATAATACTAACAGTACTTTTTTCAAGAAGGTTGTTTAAAAGTTGGATTGGTAGAGAATTTGAGAAATTTGAGATGAACTAA

mRNA sequence

TGCTTGGTTTATTTTCATTATCTTTATTTGTCTTTATATTATTTAGTTTTACATTCTGTGAAAGAATAAGCAAAATGCTTATTAGGATCCTAGGGAAATTTTTGGGGCCTAAAACAATGTCTCTAAGATAGCAGCAACCTCGTTCAAATCTTTGTAAACTTCAACTCTACTTTATTCTGAATCATTTTACTTGTATTGTGACAACTTGATTTTTATGTTGTGGTTTTGGTGTACATGAATCAGATGCTTATTTTTTTTTTTCAAGGCTTGCCCAGATTGGACTTCTTGGGCTTCAGCTGATATGGCATTTCCTACACTTCATTGTTAGCGCATTTTACTTTGTGGTTGGTATTGCCACAACACTTGAAAGCTATTTGATATCTTGGGGATTCCCATGCAAGTACAAACATCTTAATATAGACAGGGTCCAATATCTTGCCATTGTGGTCGAAAGTGATGAAGCTTATAATACATTAAAAATGATTGAACTTCTGGAATGGTTAGTATCGTTGGGCATTAGAAGCGTTTGCTTGTATGATGCTGAAGGTAATGATTTTcctttcaaatatttcaagccgccaagtgagggggagccttttggatcaatcggtgatttaaGTTGCAAGGGGATTGACGAACCTCTCCAACTAAACAAAAAAGGCATTACTCTGGAGTTCATTTCAGCTTCTGATGGAAAGGAAGCCATTGCCAGAGCAGCTAATTTTCTTCTTCAAAATAAATGGAGAAAAACCAACATGAGTGGAGACCACAAGCGATGCTTATCTGAATCTCAAATGACCGAGGCTTTAAAAGCAGTTGGTTGTGGAGGGCTTGATCCTGACCTCATTTTAGTATACGGGCCTACAAGATGTCACTTTGGGTTTCCTGCATGGAGAATCCGCTACACAGAGATTCTACACATGGGACCGTTGAAGTCCATGAAGTACGGTTCCTTGCTGAAAGCCATTTACAAGTTTACCAGGGTGCGACAGAACTATGATATTGGTGAAATGTTCAAGTACATAATACTAACAGTACTTTTTTCAAGAAGGTTGTTTAAAAGTTGGATTGGTAGAGAATTTGAGAAATTTGAGATGAACTAA

Coding sequence (CDS)

ATGATTGAACTTCTGGAATGGTTAGTATCGTTGGGCATTAGAAGCGTTTGCTTGTATGATGCTGAAGGTAATGATTTTCCTTTCAAATATTTCAAGCCGCCAAGTGAGGGGGAGCCTTTTGGATCAATCGGTGATTTAAGTTGCAAGGGGATTGACGAACCTCTCCAACTAAACAAAAAAGGCATTACTCTGGAGTTCATTTCAGCTTCTGATGGAAAGGAAGCCATTGCCAGAGCAGCTAATTTTCTTCTTCAAAATAAATGGAGAAAAACCAACATGAGTGGAGACCACAAGCGATGCTTATCTGAATCTCAAATGACCGAGGCTTTAAAAGCAGTTGGTTGTGGAGGGCTTGATCCTGACCTCATTTTAGTATACGGGCCTACAAGATGTCACTTTGGGTTTCCTGCATGGAGAATCCGCTACACAGAGATTCTACACATGGGACCGTTGAAGTCCATGAAGTACGGTTCCTTGCTGAAAGCCATTTACAAGTTTACCAGGGTGCGACAGAACTATGATATTGGTGAAATGTTCAAGTACATAATACTAACAGTACTTTTTTCAAGAAGGTTGTTTAAAAGTTGGATTGGTAGAGAATTTGAGAAATTTGAGATGAACTAA

Protein sequence

MIELLEWLVSLGIRSVCLYDAEGNDFPFKYFKPPSEGEPFGSIGDLSCKGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDHKRCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMKYGSLLKAIYKFTRVRQNYDIGEMFKYIILTVLFSRRLFKSWIGREFEKFEMN*

Homology

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BLAST of Cucsa.318750 vs. Swiss-Prot
Match: NGBR_DANRE (Dehydrodolichyl diphosphate synthase complex subunit nus1 OS=Danio rerio GN=nus1 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 7.0e-11
Identity = 52/201 (25.87%), Postives = 94/201 (46.77%), Query Frame = 1


Query: 78  YLAIVVESDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQSKEIILKKV-KNASEFQ 137
           ++ ++V  +E + T  +  L+ W +++GI  V +YD +GV K++   +++++ K   E  
Sbjct: 80  HVGLLVTEEEIHYT-DIANLVVWCMAVGISYVSVYDNQGVFKRNNSRLMEEILKQQQELL 139

Query: 138 GIDE---PLQLNKKGIT------------LEFISASDGKEAIARAANFLLQNKWRKTNMS 197
           G+      +++ K G              ++ +S  DG+ +I +AA  L +   +K   S
Sbjct: 140 GMGSSKYSVEILKNGTNKQEHQVLSCQSMVKVLSPDDGRLSIVQAAQQLCRAVEQKEKTS 199

Query: 198 GDHKRCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSM 257
            D    + +S + E+         DPDL+L +G  +   GF  W IR TEI+ M      
Sbjct: 200 KDINVSVLDSLLKESKNIP-----DPDLVLKFGTVQSTLGFLPWHIRLTEIISMPSHIDA 259

Query: 258 KYGSLLKAIYKFTRVRQNYGK 263
            Y  L  A+ +F    Q  GK
Sbjct: 260 SYDDLYDALQRFAGCEQRLGK 274

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BLAST of Cucsa.318750 vs. TrEMBL
Match: A0A0A0LQY6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G437090 PE=4 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 9.5e-148
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 1


Query: 1   MSLLRHFHLLNSPLGPMSIKVELQKIGLLGLQLIWHFLHFIVSAFYFVVGIATTLESYLI 60
           MSLLRHFHLLNSPLGPMSIKVELQKIGLLGLQLIWHFLHFIVSAFYFVVGIATTLESYLI
Sbjct: 1   MSLLRHFHLLNSPLGPMSIKVELQKIGLLGLQLIWHFLHFIVSAFYFVVGIATTLESYLI 60

Query: 61  SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQ 120
           SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQ
Sbjct: 61  SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQ 120

Query: 121 SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM 180
           SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM
Sbjct: 121 SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM 180

Query: 181 SGDHKRCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS 240
           SGDHKRCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS
Sbjct: 181 SGDHKRCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS 240

Query: 241 MKYGSLLKAIYKFTRVRQNYGK 263
           MKYGSLLKAIYKFTRVRQNYGK
Sbjct: 241 MKYGSLLKAIYKFTRVRQNYGK 262

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BLAST of Cucsa.318750 vs. TrEMBL
Match: M5VL17_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010395mg PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 7.4e-76
Identity = 143/252 (56.75%), Postives = 189/252 (75.00%), Query Frame = 1


Query: 17  MSIKVELQK-----IGLLGLQLIWHFLHFIVSAFYFVVGIATTLESYLISWGFPCKYKHL 76
           M +++++Q+     IG LGL L+WH +H  VS +YF++G+A  L+SYLIS G    YK L
Sbjct: 2   MDLRIDMQRASFAQIGNLGLLLLWHIVHLFVSIWYFLLGLAYVLQSYLISGGVLKSYKAL 61

Query: 77  NIDRVQYLAIVVESDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQSKEIILKKVKN 136
           N+ +++YLAIV+ES+EAY T K+IELL+WL ++G++ VCLYD EGVLK+SKE IL K+KN
Sbjct: 62  NLGKLRYLAIVIESEEAYQTSKVIELLQWLEAIGVKRVCLYDTEGVLKKSKEAILNKLKN 121

Query: 137 ASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDH-KRCLSE 196
           ASEF+  ++ +  N+  + LE +S SDGKEA+ +AAN L     +     GDH ++  +E
Sbjct: 122 ASEFKAYEDLVDQNR--MALEILSFSDGKEAVTKAANLLFVKYLKLAKSVGDHEEKIFTE 181

Query: 197 SQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMKYGSLLKAI 256
             M EALKA+ C G DPDL+LVYGP RCH GFPAWRIRYTEI+HMG LKSM+YGSL+KAI
Sbjct: 182 PNMDEALKAISCRGPDPDLLLVYGPARCHLGFPAWRIRYTEIVHMGQLKSMRYGSLIKAI 241

Query: 257 YKFTRVRQNYGK 263
           Y+FT VRQNYGK
Sbjct: 242 YRFTTVRQNYGK 251

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BLAST of Cucsa.318750 vs. TrEMBL
Match: A0A059BY66_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03779 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.3e-75
Identity = 142/239 (59.41%), Postives = 182/239 (76.15%), Query Frame = 1


Query: 25  KIGLLGLQLIWHFLHFIVSAFYFVVGIATTLESYLISWGFPCKYKHLNIDRVQYLAIVVE 84
           +IG   L+LIWHF+HFI+S ++FV+G+A  ++SYLIS G   KY  LN+ +++YLAIVV+
Sbjct: 16  QIGSFSLRLIWHFIHFIISTWFFVLGLAGAVDSYLISSGLLKKYNDLNLGKLRYLAIVVD 75

Query: 85  SDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQGIDEPLQL 144
           SDEA  T K+I+LL+WL  +G++ VCLYD EGVLK+SK+ IL+K+ +   F+  DE + L
Sbjct: 76  SDEARQTSKVIKLLQWLSDIGVKHVCLYDEEGVLKKSKDAILEKLGHIRLFKETDEIIPL 135

Query: 145 NKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDH-KRCLSESQMTEALKAVGCG 204
           +KK +TLE  S SDGKEA+ARAAN L        N + D  +   +E+ MTEAL+AVGC 
Sbjct: 136 DKKNMTLELASPSDGKEAVARAANLLFSKHLELRNTTEDQGENIFTEAHMTEALRAVGCS 195

Query: 205 GLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMKYGSLLKAIYKFTRVRQNYGK 263
           G DPDL+LVYGP RCH GFP WR+RYTEI+HMGPLKSMK GSL+KAIYKFT VRQNYGK
Sbjct: 196 GPDPDLLLVYGPARCHLGFPPWRLRYTEIVHMGPLKSMKNGSLMKAIYKFTLVRQNYGK 254

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BLAST of Cucsa.318750 vs. TrEMBL
Match: A0A059BY62_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03779 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.8e-75
Identity = 141/239 (59.00%), Postives = 182/239 (76.15%), Query Frame = 1


Query: 25  KIGLLGLQLIWHFLHFIVSAFYFVVGIATTLESYLISWGFPCKYKHLNIDRVQYLAIVVE 84
           +IG   L+LIWHF+HFI+S ++FV+G+A  ++SYLIS G   KY  LN+ +++YLAIVV+
Sbjct: 16  QIGSFSLRLIWHFIHFIISTWFFVLGLAGAVDSYLISSGLLKKYNDLNLGKLRYLAIVVD 75

Query: 85  SDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQGIDEPLQL 144
           SDEA  T K+I+LL+WL  +G++ VCLYD EGVLK+SK+ IL+K+ +   F+  DE + L
Sbjct: 76  SDEARQTSKVIKLLQWLSDIGVKHVCLYDEEGVLKKSKDAILEKLGHIRLFKETDEIIPL 135

Query: 145 NKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDH-KRCLSESQMTEALKAVGCG 204
           +KK +TLE  S SDGKEA+ARAAN L        N + D  +   +E+ MTEAL+AVGC 
Sbjct: 136 DKKNMTLELASPSDGKEAVARAANLLFSKHLELRNTTEDQGENIFTEAHMTEALRAVGCS 195

Query: 205 GLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMKYGSLLKAIYKFTRVRQNYGK 263
           G DPDL+LVYGP RCH GFP WR+RYTEI+HMGPLKSMK GSL+KAIY+FT VRQNYGK
Sbjct: 196 GPDPDLLLVYGPARCHLGFPPWRLRYTEIVHMGPLKSMKRGSLMKAIYRFTLVRQNYGK 254

[Close]

BLAST of Cucsa.318750 vs. TrEMBL
Match: A0A058ZS71_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L02365 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.8e-75
Identity = 142/239 (59.41%), Postives = 181/239 (75.73%), Query Frame = 1


Query: 25  KIGLLGLQLIWHFLHFIVSAFYFVVGIATTLESYLISWGFPCKYKHLNIDRVQYLAIVVE 84
           +IG   L+LIWHF+HFI+S ++FV+G+A  ++S LIS G   KY  LN+ +++YLAIVV+
Sbjct: 16  QIGSFSLRLIWHFIHFIISTWFFVLGLAGAVDSCLISSGLLKKYNDLNLGKLRYLAIVVD 75

Query: 85  SDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQGIDEPLQL 144
           SDEA  T K+I+LL+WL  +G++ VCLYD EGVLK+SK+ IL+K+ +   F+  DE + L
Sbjct: 76  SDEARQTSKVIKLLQWLSDIGVKHVCLYDEEGVLKKSKDAILEKLDHIRLFKETDEIIPL 135

Query: 145 NKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGD-HKRCLSESQMTEALKAVGCG 204
           +KK +TLE  S SDGKEA+ARAAN L        N S D  +   +E+ MTEAL+AVGC 
Sbjct: 136 DKKNMTLELASPSDGKEAVARAANLLFSKHLELRNTSEDQEENIFTEAHMTEALRAVGCS 195

Query: 205 GLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMKYGSLLKAIYKFTRVRQNYGK 263
           G DPDL+LVYGP RCH GFP WR+RYTEI+HMGPLKSMK GSL+KAIYKFT VRQNYGK
Sbjct: 196 GPDPDLLLVYGPARCHLGFPPWRLRYTEIVHMGPLKSMKNGSLMKAIYKFTLVRQNYGK 254

[Close]

BLAST of Cucsa.318750 vs. TAIR10
Match: AT1G11755.1 (AT1G11755.1 Undecaprenyl pyrophosphate synthetase family protein)

HSP 1 Score: 228.8 bits (582), Expect = 3.9e-60
Identity = 113/238 (47.48%), Postives = 168/238 (70.59%), Query Frame = 1


Query: 25  KIGLLGLQLIWHFLHFIVSAFYFVVGIATTLESYLISWGFPCKYKHLNIDRVQYLAIVVE 84
           +IG LGL L+W F+H +VS +Y V GI   +ESY I+ G   KY  +++++++ LA+VV+
Sbjct: 16  QIGDLGLNLLWRFIHIVVSLWYIVSGIFEAIESYAITLGLNKKYGSIDLEKLRCLAVVVD 75

Query: 85  SDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQGIDEPLQL 144
            + A +   ++ELL+WL ++G++ V L+D++G+LK+SK++IL+ V  +   + I++ +  
Sbjct: 76  IEAAQDVANVVELLQWLTTIGVKQVGLFDSQGLLKKSKDLILETVPGSMLLEEIEKDVAP 135

Query: 145 NKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDH-KRCLSESQMTEALKAVGCG 204
           + K I LEFIS+SD KEA+ +AAN LLQ   + ++   D  +   +ES + +AL+ VG  
Sbjct: 136 DGKRIALEFISSSDNKEAVMKAANILLQRYLKSSHPEDDKGEDFFTESHLNDALRVVGEN 195

Query: 205 GLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMKYGSLLKAIYKFTRVRQNYG 262
              PDL+LVYGP R H GFPAWR+RYTEI+HMG LK M+YGSLLKAI+KFT V QNYG
Sbjct: 196 VHVPDLLLVYGPIRSHLGFPAWRLRYTEIVHMGTLKYMRYGSLLKAIHKFTGVHQNYG 253

[Close]

BLAST of Cucsa.318750 vs. NCBI nr
Match: gi|449460714|ref|XP_004148090.1| (PREDICTED: dehydrodolichyl diphosphate syntase complex subunit NUS1 [Cucumis sativus])

HSP 1 Score: 530.8 bits (1366), Expect = 1.4e-147
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 1


Query: 1   MSLLRHFHLLNSPLGPMSIKVELQKIGLLGLQLIWHFLHFIVSAFYFVVGIATTLESYLI 60
           MSLLRHFHLLNSPLGPMSIKVELQKIGLLGLQLIWHFLHFIVSAFYFVVGIATTLESYLI
Sbjct: 1   MSLLRHFHLLNSPLGPMSIKVELQKIGLLGLQLIWHFLHFIVSAFYFVVGIATTLESYLI 60

Query: 61  SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQ 120
           SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQ
Sbjct: 61  SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQ 120

Query: 121 SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM 180
           SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM
Sbjct: 121 SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM 180

Query: 181 SGDHKRCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS 240
           SGDHKRCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS
Sbjct: 181 SGDHKRCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS 240

Query: 241 MKYGSLLKAIYKFTRVRQNYGK 263
           MKYGSLLKAIYKFTRVRQNYGK
Sbjct: 241 MKYGSLLKAIYKFTRVRQNYGK 262

[Close]

BLAST of Cucsa.318750 vs. NCBI nr
Match: gi|659118580|ref|XP_008459194.1| (PREDICTED: nogo-B receptor isoform X1 [Cucumis melo])

HSP 1 Score: 508.8 bits (1309), Expect = 5.5e-141
Identity = 250/262 (95.42%), Postives = 256/262 (97.71%), Query Frame = 1


Query: 1   MSLLRHFHLLNSPLGPMSIKVELQKIGLLGLQLIWHFLHFIVSAFYFVVGIATTLESYLI 60
           MSLL HFHL NSPLGPMSIKVELQKIG+LGLQ+IWHFLHFIVSA YFVVGIATTLESYLI
Sbjct: 1   MSLLHHFHLSNSPLGPMSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLI 60

Query: 61  SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQ 120
           SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLK+IELLEWL+SLGIRSVCLYDAEGVLKQ
Sbjct: 61  SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQ 120

Query: 121 SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM 180
           SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM
Sbjct: 121 SKEIILKKVKNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNM 180

Query: 181 SGDHKRCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS 240
           SGD K+CLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS
Sbjct: 181 SGDQKQCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKS 240

Query: 241 MKYGSLLKAIYKFTRVRQNYGK 263
           M YGSLLKAIYKFT V+QNYGK
Sbjct: 241 MLYGSLLKAIYKFTMVQQNYGK 262

[Close]

BLAST of Cucsa.318750 vs. NCBI nr
Match: gi|659118584|ref|XP_008459196.1| (PREDICTED: nogo-B receptor isoform X3 [Cucumis melo])

HSP 1 Score: 479.9 bits (1234), Expect = 2.8e-132
Identity = 236/246 (95.93%), Postives = 242/246 (98.37%), Query Frame = 1


Query: 17  MSIKVELQKIGLLGLQLIWHFLHFIVSAFYFVVGIATTLESYLISWGFPCKYKHLNIDRV 76
           MSIKVELQKIG+LGLQ+IWHFLHFIVSA YFVVGIATTLESYLISWGFPCKYKHLNIDRV
Sbjct: 1   MSIKVELQKIGILGLQMIWHFLHFIVSASYFVVGIATTLESYLISWGFPCKYKHLNIDRV 60

Query: 77  QYLAIVVESDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQ 136
           QYLAIVVESDEAYNTLK+IELLEWL+SLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQ
Sbjct: 61  QYLAIVVESDEAYNTLKIIELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQ 120

Query: 137 GIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDHKRCLSESQMTEA 196
           GIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGD K+CLSESQMTEA
Sbjct: 121 GIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDQKQCLSESQMTEA 180

Query: 197 LKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMKYGSLLKAIYKFTRV 256
           LKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSM YGSLLKAIYKFT V
Sbjct: 181 LKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMLYGSLLKAIYKFTMV 240

Query: 257 RQNYGK 263
           +QNYGK
Sbjct: 241 QQNYGK 246

[Close]

BLAST of Cucsa.318750 vs. NCBI nr
Match: gi|659118586|ref|XP_008459197.1| (PREDICTED: nogo-B receptor isoform X4 [Cucumis melo])

HSP 1 Score: 452.2 bits (1162), Expect = 6.2e-124
Identity = 221/230 (96.09%), Postives = 226/230 (98.26%), Query Frame = 1


Query: 33  LIWHFLHFIVSAFYFVVGIATTLESYLISWGFPCKYKHLNIDRVQYLAIVVESDEAYNTL 92
           +IWHFLHFIVSA YFVVGIATTLESYLISWGFPCKYKHLNIDRVQYLAIVVESDEAYNTL
Sbjct: 1   MIWHFLHFIVSASYFVVGIATTLESYLISWGFPCKYKHLNIDRVQYLAIVVESDEAYNTL 60

Query: 93  KMIELLEWLVSLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQGIDEPLQLNKKGITLE 152
           K+IELLEWL+SLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQGIDEPLQLNKKGITLE
Sbjct: 61  KIIELLEWLISLGIRSVCLYDAEGVLKQSKEIILKKVKNASEFQGIDEPLQLNKKGITLE 120

Query: 153 FISASDGKEAIARAANFLLQNKWRKTNMSGDHKRCLSESQMTEALKAVGCGGLDPDLILV 212
           FISASDGKEAIARAANFLLQNKWRKTNMSGD K+CLSESQMTEALKAVGCGGLDPDLILV
Sbjct: 121 FISASDGKEAIARAANFLLQNKWRKTNMSGDQKQCLSESQMTEALKAVGCGGLDPDLILV 180

Query: 213 YGPTRCHFGFPAWRIRYTEILHMGPLKSMKYGSLLKAIYKFTRVRQNYGK 263
           YGPTRCHFGFPAWRIRYTEILHMGPLKSM YGSLLKAIYKFT V+QNYGK
Sbjct: 181 YGPTRCHFGFPAWRIRYTEILHMGPLKSMLYGSLLKAIYKFTMVQQNYGK 230

[Close]

BLAST of Cucsa.318750 vs. NCBI nr
Match: gi|657990311|ref|XP_008387378.1| (PREDICTED: nogo-B receptor [Malus domestica])

HSP 1 Score: 293.9 bits (751), Expect = 2.8e-76
Identity = 148/254 (58.27%), Postives = 189/254 (74.41%), Query Frame = 1


Query: 17  MSIKVELQK-------IGLLGLQLIWHFLHFIVSAFYFVVGIATTLESYLISWGFPCKYK 76
           M  ++E+Q+       IG LGL L+WH LH  VS +YF++ +A   ESYLIS G    YK
Sbjct: 1   MDFQMEMQRVSFCAAQIGNLGLVLLWHILHLFVSIWYFLLDLAFVFESYLISGGVLKNYK 60

Query: 77  HLNIDRVQYLAIVVESDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQSKEIILKKV 136
            L++ +++YLAIV+ES+EAY T K+IELL+WL ++G++ VCLYD EGVLK+SK  IL K+
Sbjct: 61  ALDLGKLKYLAIVIESEEAYQTSKVIELLQWLEAIGVKRVCLYDTEGVLKKSKGAILNKL 120

Query: 137 KNASEFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKTNMSGDH-KRCL 196
           KNA+EF+  DE L L++K + LEF S SDGKEA+ +AAN L     +  N+ GDH ++  
Sbjct: 121 KNATEFEDGDEGL-LDQKRMALEFSSFSDGKEAVTKAANLLFAKYLKLANLVGDHEEKIF 180

Query: 197 SESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPLKSMKYGSLLK 256
           +E  M EALKA+GC G DPDL+LVYGP RCH GFPAWRIRYTEI+HMG LK MKYGSL+K
Sbjct: 181 TEPNMDEALKAIGCRGPDPDLLLVYGPARCHLGFPAWRIRYTEIIHMGELKCMKYGSLIK 240

Query: 257 AIYKFTRVRQNYGK 263
           AIY+FT VRQNYGK
Sbjct: 241 AIYRFTTVRQNYGK 253

The following BLAST results are available for this feature:

BLAST of Cucsa.318750 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NGBR_DANRE	7.0e-11	25.87	Dehydrodolichyl diphosphate synthase complex subunit nus1 OS=Danio rerio GN=nus1...	[more]

BLAST of Cucsa.318750 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQY6_CUCSA	9.5e-148	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G437090 PE=4 SV=1	[more]
M5VL17_PRUPE	7.4e-76	56.75	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010395mg PE=4 SV=1	[more]
A0A059BY66_EUCGR	1.3e-75	59.41	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03779 PE=4 SV=1	[more]
A0A059BY62_EUCGR	2.8e-75	59.00	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03779 PE=4 SV=1	[more]
A0A058ZS71_EUCGR	4.8e-75	59.41	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L02365 PE=4 SV=1	[more]

BLAST of Cucsa.318750 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G11755.1	3.9e-60	47.48	Undecaprenyl pyrophosphate synthetase family protein	[more]

BLAST of Cucsa.318750 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449460714\|ref\|XP_004148090.1\|	1.4e-147	100.00	PREDICTED: dehydrodolichyl diphosphate syntase complex subunit NUS1 [Cucumis sat...	[more]
gi\|659118580\|ref\|XP_008459194.1\|	5.5e-141	95.42	PREDICTED: nogo-B receptor isoform X1 [Cucumis melo]	[more]
gi\|659118584\|ref\|XP_008459196.1\|	2.8e-132	95.93	PREDICTED: nogo-B receptor isoform X3 [Cucumis melo]	[more]
gi\|659118586\|ref\|XP_008459197.1\|	6.2e-124	96.09	PREDICTED: nogo-B receptor isoform X4 [Cucumis melo]	[more]
gi\|657990311\|ref\|XP_008387378.1\|	2.8e-76	58.27	PREDICTED: nogo-B receptor [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001441	UPP_synth-like
IPR001441	UPP_synth-like
IPR001441	UPP_synth-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0001525	angiogenesis
biological_process	GO:0019408	dolichol biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:1904423	dehydrodolichyl diphosphate synthase complex
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.318750.5	Cucsa.318750.5	mRNA
Cucsa.318750.4	Cucsa.318750.4	mRNA
Cucsa.318750.1	Cucsa.318750.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001441	Decaprenyl diphosphate synthase-like	GENE3D	G3DSA:3.40.1180.10		coord: 58..172 score: 6.0
IPR001441	Decaprenyl diphosphate synthase-like	unknown	SSF64005	Undecaprenyl diphosphate synthase	coord: 2..168 score: 1.83
None	No IPR available	PANTHER	PTHR21528	UNCHARACTERIZED	coord: 1..175 score: 3.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.318750	Cla012995	Watermelon (97103) v1	cgywmB580
Cucsa.318750	Csa2G437090	Cucumber (Chinese Long) v2	cgycuB456
Cucsa.318750	MELO3C021891	Melon (DHL92) v3.5.1	cgymeB525
Cucsa.318750	ClCG09G016910	Watermelon (Charleston Gray)	cgywcgB551
Cucsa.318750	CSPI02G27740	Wild cucumber (PI 183967)	cgycpiB481
Cucsa.318750	CmaCh20G009220	Cucurbita maxima (Rimu)	cgycmaB0881
Cucsa.318750	CmaCh02G004620	Cucurbita maxima (Rimu)	cgycmaB0882
Cucsa.318750	CmoCh20G009290	Cucurbita moschata (Rifu)	cgycmoB0878
Cucsa.318750	Lsi10G002600	Bottle gourd (USVL1VR-Ls)	cgylsiB520
Cucsa.318750	Cp4.1LG16g01840	Cucurbita pepo (Zucchini)	cgycpeB0837
Cucsa.318750	Cp4.1LG05g12060	Cucurbita pepo (Zucchini)	cgycpeB0838
Cucsa.318750	MELO3C021891.2	Melon (DHL92) v3.6.1	cgymedB526
Cucsa.318750	CsaV3_2G036400	Cucumber (Chinese Long) v3	cgycucB495
Cucsa.318750	Cla97C09G178480	Watermelon (97103) v2	cgywmbB556
Cucsa.318750	Bhi10G001313	Wax gourd	cgywgoB638
Cucsa.318750	Carg24040	Silver-seed gourd	carcgyB1170

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.318750	Silver-seed gourd	carcgyB0622
Cucsa.318750	Cucurbita moschata (Rifu)	cgycmoB0879
Cucsa.318750	Melon (DHL92) v3.5.1	cgymeB524
Cucsa.318750	Melon (DHL92) v3.6.1	cgymedB525