Cucsa.318720 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.318720
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	THO complex subunit 7
Location	scaffold03076 : 244585 .. 249953 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTTTTTAACTTGTTTTGAGAGTTAAAACGTCACTTCGACACTTTGTAGAAATTTTGTGTTTGGTTTTGAGTTCGGAAGGCGCACATAATCATTTTGAAGATTGTTTTGGGCTCAACACAATTTGTAGGTGATTTAGTTGGTTTTTAGATTGAAAGTCATATTTAGGGAGTTTTGACTTGTAATGGGATTTAAAGTGTTACATAGACACTTTTAACTTGTTTTGAGAGTTGTATTGATATTTTCACACTTTTAAGGAACTTTTCAGATTGACATTGATATTACATGCGGATATCTTTCAGCTACAACAGCCAATCATGCATATATTCCATACTTATTGTATGCTTGAGTTGTAATATGTTGTGTCTATTCTGCAACTACGGTAGCCATTCATGCATATATTTCATACTTATTGTATGCTTTAGTTGTAATATGTTGTGGCTAGTCTACAGCTACGGTAGCCAATCATGCATAGATTTCATATTTATTGTACGCTTTATTGTAATATTGTAATATGTTGTGGCTATCCTACATACATTTTGTAGGCTTGAGTTTTATTCCTACTTAGGTAGTTTTAACTTGTTCTGAAAGTTACAGTGTTACTTGGAATTTTTTTAGAAATTTTGTAGTTGGTTTTTAGTTTGAAAGTTACACTTGAGTAGTTTTTACTTGTTTTGAGAATTAAAGTGTCACTTAGACCATTTTTAGAGATTTTGGGGTTGGTTTTGAGTTAGGAAGGTACACTTGGACATTTGTAGGTTTTTGAGATTTAAGACTTGAAGTACTTAACCACTTGTTAACTTGTTTTTTGAGTTAAAAGTGCCATTTAGACTCATTTTAGAGATTTTGTGTTTGGGTATCTTTTAGGTTGTTTTGAGAGTTAAAGTGAGACATTGACACTTTTTGGATGTCTTTTAGGTCGGTTTGACATTGATACTGTTTCTATAGACTTGAAAGAAACACGAAACAGTCCTTCCTCAACTTCCTCACTTCTTCTATATTTCAAACTTGACCTTAGTCCTCCATTTCAATTGCCTATTTTCGTACCTCTTCAATTTCTATGTTCTCATTTTTCACCATTTTATTTCCAGGATCTGATTAAGAAGTAGATTATGTCTGTGAGAGCGAGGAAAGTCTCCACTCGAGGGGAAGCAGTGGCAGCAAATTATGCCTTTGGGCCTCTAGAAGATGATGTTATTATTAAACACAGGCTTCTCACACGGACAACCACAACAAGGGGGGAACCTCCATTGAAGAAGCTTCAGAAGAAGTTTACTTCCTTTGTTCTTGAGATTGAAAAGGATGGGAGTAACAATGATGACTGTGAGAAGCTTTCCAGAGCTTTTTTACAAGAGTTATCCACGTTTGAAATTCCTTTGCTGAAGAGTAAAGCAGTTGTTGATGCTAATATTAGGGAAAAGGAGAGTTTCCATGAGTTTAAGGATGAGATAAACAAACAGATTTTGTTAGCTCAGGATGATATTGAAGATCTTAAGAAACAGCTTGAAGAAAGCAAAATTGAGAGGCAACACAAGGAGGAGTGTGAGGCAATTAGAAAACTTATAGCAGCACAACCACCTAGGTCTGTGACACAAAAGACTATTGTGGATTTGGAGAAAGAGATTGCTGCACTTGATTCAGAGAACACAGCTAGTTCAAGGATGCTGGAGCTTCGTAAGAAGCAATTTGCGCTTTTGTTGCACGTGGTATGTTCCCAATCCCATCATCAATTTCTTGTACTTATATAGTTATATTCTTTAACTGACTCTAAATATAAACATTTTGGTCTCTTTGTTTGAAGATTCATTAGTTTAGCCATTGGATTCTCCACTACCGCCAGTTTTTCACTTTTTGAATTGTTTAGGGATTCTTAGACTGATTGGTGCACAGAGAAGATAAAGATTTATATTTTCAAATTATGGCTCATCTGAGGAAGGATGTGCATGGTTCTATTTGTGTTTTTTTGCTAGTTTACCCTAGGTGCTGAAATGATTGGAAAATTTGATTCAATAAAAATGTAATTTCTAGTGTTCAGCCTCGAAGATCCAAGATTTTTATTTGAAAGTATCTTCTAGGCTTTTCTAGTTTTTTTAAAAATTATCTTTTAGGCTTGTGAGACCTTCCTAAGAGGAACAACTTTATAATGTTGTGAAAAGCTTGAGAATTCAAGATGAGTATACAAACTTTAACATGTTTTGAAAGTTTCAAACCTTATTTCTGGGAAATTTTTTGAAGGTCTTCAGCTTTAACACCTCTTTTCCAAATGACAAAATCACTCTTTTAGAAACGATCTTCATGAGTCAGACCTTCATCAAAGAAACGGAGATCTTTCGGTTCTCTGTCAACATTCAATGAAGCCTTCCTATAGTTTCTTTTATATATAGAAAGAAAAGAATGAAGGAATACAAGGGAAAAAAACCAAGTCCACACTCGAAATCTGTAGCTCTTCCTATTGTTATCTTGGCTTGAGTAAAATTGATTATCTTCGATGGAAAAGCTACAGATTTTGACTCGTTTTTTGAACACCTTATTTACATTTCTCTCACTTTCTGTTGGGTTTGGCATAGAGATAGCAGGGCTTAGGTGGAGGTGGAGGAGGTGTTCTCACATTCTCCTTTCAAGGAGCAGGGCAGGGTTTTTAGACAGGCTAGTTTCTTTGCAGTTTCCTGGGGCATTTGGATTGAGAGGATTAATGGAACTTTTAGAGAGGTGGAGAGATCAGCTGAGGAAGTTTGGGAGGTAGTTAGGTTTATGTCTCATTATGTGCTTTGGTCACTAGACCTTTGTGTATTTATGAGTTTGGTCCTGTCCTTTTGGATTGAATCATTCTCAGTAGCTAGGGTTGGACTCTCTTTTTATAGGATTTGTTTGTTTTTTCTTCTTATCTGGTCTTCTATATTCTTTCATTTTTCTCAATGACAGCATGATTTCTTACCATAAAAAGAAACATTGCTCTTATTGAGTGTAAATTCTCCCTATGTATTTGGGACTACAGCCTTACTTCTCCAACCGTATATTCTCCTCGTGCATGTTCGAATTTCTATCTGAATGAAGTAGTTGTCTAACATGAGCTCTTGAACGAGATGGAATGCCTTTTAAGTGATGTGCATTCAAGAGTTATAGCTGTAGTCACTTTGGAAGTGATTTAATGGTCATCTATTCTACTGTTAGCCATTCTAGAATGTATTACAACGTTCCTTCATACGGTTAAAATGTTCTGTTACTACCATTTAATCCAAGGGCTTCACAAGATGGAATATTACATGAAGATTTCTGGAACACCCAACAAGAAGACTGCCTAGAAATACCAATTAAAAAGAAAAATTTACCCTCCTGGTCCCGGATTTGGGAAAAGATTCGGTTTGCCAGTAATTTATTATCTTGTCGGAATAGAGAAAGTTGTGGCATGGTGCTTGGGTCGTTTTGAGGGAATGTCTGTGTTTTTAACTTCCCCATTCTGGAAGTGACTTCAACCACTTCATATATATACTTTGATCTGGACTAACATTGCCGGAGGAGGATTCATCTTTAACATCTGTTCATTTTCTCTTGCCTTTTGCCTTTTGAATTGTTGTTGGGCCATGGTGAGGTCTTTTAAACCCATCTAGAAATTGTAGCCACACCTGAAAAGATCTCTATCCACACTTTTGACAATCTGCAAAATACCTGTCGTCTGGTGTTAAGCACTAACTAACGCTGTTCAAGTTTGTTTCTCTTGTGATTATGGGGAAGTCCGAGGTTTGCTCATATATGCTTTGAAATCCCATCTGAGCAGTTGTGCCTTGATAATTATTGTTTGACTTCGATTGTTTATATTGTACCAAATACTTGAAATCCTCAACTTATATTGGTGCAGGTGGATGAGTTGCAAAATACCATAGAGGATGAACAGAAGAGTTTAATTGAGGAAACGAGAATCACAGCTGAGGAGAATAAAATTGGTGTGGACGATGCTAGCGGAAGCCTGGAAGCCATGGCTGTCGACTGAGGTTGCACTCCTCGTATTTTCTGCTGTAAAACTTGTATGCATATAGTTTTTTTTTCAACTCAATATCAAAGAGTTCATGTTATCTGTAAAATCTTGCTCAAGTCAAGAAATCTCAATGCAATAGCGAATGAGTAATGTAGAATCTTGTTCTTATTCTTAGGTATTCTAGGTGAAACAACTTGCCATTAGCAAATGAGTAAACCTAATTTCCATTGATGTTTAGGATTTATGTTTTTTTTTAAATTGCAAATATATCAAATTCTACCTATAAACTTGTAACGCATATAAATTTTTATGGACTATCAGTGATAGACCAATATTTCTATTA

mRNA sequence

CACTTTTTAACTTGTTTTGAGAGTTAAAACGTCACTTCGACACTTTGTAGAAATTTTGTGTTTGGTTTTGAGTTCGGAAGGCGCACATAATCATTTTGAAGATTGTTTTGGGCTCAACACAATTTGATCTGATTAAGAAGTAGATTATGTCTGTGAGAGCGAGGAAAGTCTCCACTCGAGGGGAAGCAGTGGCAGCAAATTATGCCTTTGGGCCTCTAGAAGATGATGTTATTATTAAACACAGGCTTCTCACACGGACAACCACAACAAGGGGGGAACCTCCATTGAAGAAGCTTCAGAAGAAGTTTACTTCCTTTGTTCTTGAGATTGAAAAGGATGGGAGTAACAATGATGACTGTGAGAAGCTTTCCAGAGCTTTTTTACAAGAGTTATCCACGTTTGAAATTCCTTTGCTGAAGAGTAAAGCAGTTGTTGATGCTAATATTAGGGAAAAGGAGAGTTTCCATGAGTTTAAGGATGAGATAAACAAACAGATTTTGTTAGCTCAGGATGATATTGAAGATCTTAAGAAACAGCTTGAAGAAAGCAAAATTGAGAGGCAACACAAGGAGGAGTGTGAGGCAATTAGAAAACTTATAGCAGCACAACCACCTAGGTCTGTGACACAAAAGACTATTGTGGATTTGGAGAAAGAGATTGCTGCACTTGATTCAGAGAACACAGCTAGTTCAAGGATGCTGGAGCTTCGTAAGAAGCAATTTGCGCTTTTGTTGCACGTGGTGGATGAGTTGCAAAATACCATAGAGGATGAACAGAAGAGTTTAATTGAGGAAACGAGAATCACAGCTGAGGAGAATAAAATTGGTGTGGACGATGCTAGCGGAAGCCTGGAAGCCATGGCTGTCGACTGAGGTTGCACTCCTCGTATTTTCTGCTGTAAAACTTGTATGCATATAGTTTTTTTTTCAACTCAATATCAAAGAGTTCATGTTATCTGTAAAATCTTGCTCAAGTCAAGAAATCTCAATGCAATAGCGAATGAGTAATGTAGAATCTTGTTCTTATTCTTAGGTATTCTAGGTGAAACAACTTGCCATTAGCAAATGAGTAAACCTAATTTCCATTGATGTTTAGGATTTATGTTTTTTTTTaaattgcaaatatatcaaattctacctataaacttgtaacgcatataaatttttatggactatcagtgatagaccaatatttctatta

Coding sequence (CDS)

ATGTCTGTGAGAGCGAGGAAAGTCTCCACTCGAGGGGAAGCAGTGGCAGCAAATTATGCCTTTGGGCCTCTAGAAGATGATGTTATTATTAAACACAGGCTTCTCACACGGACAACCACAACAAGGGGGGAACCTCCATTGAAGAAGCTTCAGAAGAAGTTTACTTCCTTTGTTCTTGAGATTGAAAAGGATGGGAGTAACAATGATGACTGTGAGAAGCTTTCCAGAGCTTTTTTACAAGAGTTATCCACGTTTGAAATTCCTTTGCTGAAGAGTAAAGCAGTTGTTGATGCTAATATTAGGGAAAAGGAGAGTTTCCATGAGTTTAAGGATGAGATAAACAAACAGATTTTGTTAGCTCAGGATGATATTGAAGATCTTAAGAAACAGCTTGAAGAAAGCAAAATTGAGAGGCAACACAAGGAGGAGTGTGAGGCAATTAGAAAACTTATAGCAGCACAACCACCTAGGTCTGTGACACAAAAGACTATTGTGGATTTGGAGAAAGAGATTGCTGCACTTGATTCAGAGAACACAGCTAGTTCAAGGATGCTGGAGCTTCGTAAGAAGCAATTTGCGCTTTTGTTGCACGTGGTGGATGAGTTGCAAAATACCATAGAGGATGAACAGAAGAGTTTAATTGAGGAAACGAGAATCACAGCTGAGGAGAATAAAATTGGTGTGGACGATGCTAGCGGAAGCCTGGAAGCCATGGCTGTCGACTGA

Protein sequence

MSVRARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLAQDDIEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENTASSRMLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDASGSLEAMAVD*

Homology

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BLAST of Cucsa.318720 vs. Swiss-Prot
Match: THO7A_ARATH (THO complex subunit 7A OS=Arabidopsis thaliana GN=THO7A PE=1 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 1.6e-86
Identity = 172/242 (71.07%), Postives = 201/242 (83.06%), Query Frame = 1


Query: 1   MSVRARK-VSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVL 60
           MSVRAR+ VS R E VAANYAF PL DD II++RLLTRTTTTRGEPPLKKLQKKFTSFV+
Sbjct: 1   MSVRARRIVSGRSETVAANYAFDPLHDDKIIRNRLLTRTTTTRGEPPLKKLQKKFTSFVI 60

Query: 61  EIEKDGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILL 120
           E++K+  N  +C +L++AFLQELS FEIPLLKS+ VV AN+REKE+F+E KDE N+QI+ 
Sbjct: 61  ELDKEEDNYSECGRLAKAFLQELSAFEIPLLKSQVVVAANLREKENFNELKDETNRQIMQ 120

Query: 121 AQDDIEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENT 180
           AQ DIEDLKKQLEESKIERQ KEECEAIRKLI+AQPPRS TQK I +L+KEIA L++ENT
Sbjct: 121 AQADIEDLKKQLEESKIERQQKEECEAIRKLISAQPPRSETQKVIHELKKEIAELEAENT 180

Query: 181 ASSRMLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDASGSLEAMA 240
           AS R+LELRKKQFALLLHVVDELQ T+EDEQKS++EE      +  I  D A    EAM+
Sbjct: 181 ASWRLLELRKKQFALLLHVVDELQETMEDEQKSMVEEM-----QRNITADGA----EAMS 233

Query: 241 VD 242
           +D
Sbjct: 241 ID 233

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BLAST of Cucsa.318720 vs. Swiss-Prot
Match: THO7B_ARATH (THO complex subunit 7B OS=Arabidopsis thaliana GN=THO7B PE=1 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 4.7e-86
Identity = 164/233 (70.39%), Postives = 202/233 (86.70%), Query Frame = 1


Query: 1   MSVRARKVSTRGEAVAA--NYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFV 60
           MSV+AR++S R E V    NYAF P++DD II++RLLTRTTTTRGEPPLKKLQKKFTSFV
Sbjct: 1   MSVKARRISGRLETVVTKVNYAFDPVDDDKIIRNRLLTRTTTTRGEPPLKKLQKKFTSFV 60

Query: 61  LEIEKDGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQIL 120
           LE++K+  N +DC +L++AFLQELSTFEIPLLKS+AVV+AN+REKESF+E KDE  +QI+
Sbjct: 61  LEVDKEEENYNDCGRLAKAFLQELSTFEIPLLKSQAVVEANLREKESFNEVKDETERQIM 120

Query: 121 LAQDDIEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSEN 180
            A+ +IEDLKKQLEESKI+RQHKEECE IRKLI+AQPPRS T+K I +L KEIA L++E+
Sbjct: 121 QAKAEIEDLKKQLEESKIDRQHKEECETIRKLISAQPPRSETEKVIYELNKEIAELEAES 180

Query: 181 TASSRMLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDA 232
           TAS R+LELRKKQFALL+HVVDELQNT+EDEQKSL++E R +A E++  + DA
Sbjct: 181 TASWRLLELRKKQFALLMHVVDELQNTMEDEQKSLVDEIR-SASEDQRNITDA 232

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BLAST of Cucsa.318720 vs. Swiss-Prot
Match: THOC7_XENLA (THO complex subunit 7 homolog OS=Xenopus laevis GN=thoc7 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.4e-18
Identity = 64/204 (31.37%), Postives = 105/204 (51.47%), Query Frame = 1


Query: 22  GPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDGSNNDDCEKLSRAFLQE 81
           G + DD +I+ RLL        +  +  L K F  +       GS  +   +  R  L  
Sbjct: 2   GAVTDDEVIRKRLLIDGDGAGDDRRINLLVKSFVKWC----NSGSQEEGYSQYQR-MLSS 61

Query: 82  LSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLAQDDIEDLKKQLEESKIERQHK 141
           LS  E  + K+  V D N+RE E++ +   +I   I  A + I + KKQ+ ++K  R+++
Sbjct: 62  LSQCEYSMGKTLLVHDMNLREMENYEKIYVDIESSIAAAHEKIAECKKQILQAKRIRKNR 121

Query: 142 EECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENTASSRMLELRKKQFALLLHVVDE 201
           +E +A+ K+I   P R  T K +  L+KE+  L      +   LELR+KQF +LL  + E
Sbjct: 122 QEYDALAKVIEQHPDRHETLKQLEALDKELKQLSHTKENAEDKLELRRKQFHVLLSTIHE 181

Query: 202 LQNTIEDEQKSLIEETRITAEENK 226
           LQ T+E++ K L EE++ +  E +
Sbjct: 182 LQQTLENDDK-LAEESQESPMETQ 199

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BLAST of Cucsa.318720 vs. Swiss-Prot
Match: THOC7_NEMVE (THO complex subunit 7 homolog OS=Nematostella vectensis GN=thoc7 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.2e-18
Identity = 59/187 (31.55%), Postives = 98/187 (52.41%), Query Frame = 1


Query: 24  LEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDGSNNDDCEKLSRAFLQELS 83
           + DD +I+ RLL        +  +  L K F  +        S +DD +   +  L +L+
Sbjct: 1   MADDEVIRKRLLIDGEGVGDDRRITTLMKTFVKWC------NSTDDDNDASYQKLLAQLA 60

Query: 84  TFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLAQDDIEDLKKQLEESKIERQHKEE 143
             E  + K++ V   N RE E++ +   E+ + I  A ++I   K  L+E+K  R++K+E
Sbjct: 61  QCEFAMGKTEMVHAMNERETENYEKAYKEVEQSITHAYEEIATCKTNLQEAKRIRRNKQE 120

Query: 144 CEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENTASSRMLELRKKQFALLLHVVDELQ 203
            +A+ K I   P R  T + I +LEK++ +L     +    LELRKKQF LL++ + ELQ
Sbjct: 121 YDALAKEITKHPERQETTRQISELEKDLNSLTETKESLVSKLELRKKQFYLLINTIHELQ 180

Query: 204 NTIEDEQ 211
             I+DE+
Sbjct: 181 RMIDDEK 181

[Close]

BLAST of Cucsa.318720 vs. Swiss-Prot
Match: THOC7_HUMAN (THO complex subunit 7 homolog OS=Homo sapiens GN=THOC7 PE=1 SV=3)

HSP 1 Score: 92.4 bits (228), Expect = 7.1e-18
Identity = 66/203 (32.51%), Postives = 103/203 (50.74%), Query Frame = 1


Query: 22  GPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEKDGSNNDDCEKLSRAFLQE 81
           G + DD +I+ RLL        +  +  L K F  +       GS  +   +  R  L  
Sbjct: 2   GAVTDDEVIRKRLLIDGDGAGDDRRINLLVKSFIKWC----NSGSQEEGYSQYQR-MLST 61

Query: 82  LSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLAQDDIEDLKKQLEESKIERQHK 141
           LS  E  + K+  V D N+RE E++ +   EI   I  A + I + KKQ+ ++K  R+++
Sbjct: 62  LSQCEFSMGKTLLVYDMNLREMENYEKIYKEIECSIAGAHEKIAECKKQILQAKRIRKNR 121

Query: 142 EECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENTASSRMLELRKKQFALLLHVVDE 201
           +E +A+ K+I   P R  T K +  L KE+  L     +    LELR+KQF +LL  + E
Sbjct: 122 QEYDALAKVIQHHPDRHETLKELEALGKELEHLSHIKESVEDKLELRRKQFHVLLSTIHE 181

Query: 202 LQNTIE-DEQKSLIEETRITAEE 224
           LQ T+E DE+ S +EE +  + E
Sbjct: 182 LQQTLENDEKLSEVEEAQEASME 199

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BLAST of Cucsa.318720 vs. TrEMBL
Match: A0A0A0LRG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G437120 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 6.5e-127
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1


Query: 1   MSVRARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60
           MSVRARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE
Sbjct: 1   MSVRARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60

Query: 61  IEKDGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLA 120
           IEKDGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLA
Sbjct: 61  IEKDGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLA 120

Query: 121 QDDIEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENTA 180
           QDDIEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENTA
Sbjct: 121 QDDIEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENTA 180

Query: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDASGSLEAMAV 240
           SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDASGSLEAMAV
Sbjct: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDASGSLEAMAV 240

Query: 241 D 242
           D
Sbjct: 241 D 241

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BLAST of Cucsa.318720 vs. TrEMBL
Match: A0A061F6H5_THECC (Tho complex subunit 7/Mft1p OS=Theobroma cacao GN=TCM_025487 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 5.0e-103
Identity = 193/238 (81.09%), Postives = 217/238 (91.18%), Query Frame = 1


Query: 4   RARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEK 63
           + RKVS+RGE VAANYAFGP EDD+IIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE+EK
Sbjct: 4   KGRKVSSRGETVAANYAFGPAEDDIIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEVEK 63

Query: 64  DGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLAQDD 123
           D  N ++C KLS++FLQELSTFEIPLLKSKAV+DAN+REKE+F+E KDEIN+QIL AQ D
Sbjct: 64  DEDNYNECAKLSKSFLQELSTFEIPLLKSKAVIDANLREKENFNELKDEINRQILQAQTD 123

Query: 124 IEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENTASSR 183
           IEDLKKQLEESKIERQHKEECEAIRKLI+AQPPRS TQK+I +LEKEIAA ++ENTA SR
Sbjct: 124 IEDLKKQLEESKIERQHKEECEAIRKLISAQPPRSETQKSITELEKEIAAWEAENTAGSR 183

Query: 184 MLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDASGSLEAMAVD 242
           +LELRKKQFALLLHVVDELQNTIE+EQKSLIEE R+  EE K G++DA+G  EAMAVD
Sbjct: 184 LLELRKKQFALLLHVVDELQNTIEEEQKSLIEEMRMVTEEQKSGMEDANGGSEAMAVD 241

[Close]

BLAST of Cucsa.318720 vs. TrEMBL
Match: A0A0B0PUA3_GOSAR (THO complex subunit 7 OS=Gossypium arboreum GN=F383_12023 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 3.3e-102
Identity = 191/238 (80.25%), Postives = 215/238 (90.34%), Query Frame = 1


Query: 4   RARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEK 63
           + RKVS RGE V ANYAFGP EDD IIKHRLLTRTTTTRGEPPLKKLQ+KFTSFVLE+EK
Sbjct: 4   KGRKVSGRGETVTANYAFGPAEDDAIIKHRLLTRTTTTRGEPPLKKLQRKFTSFVLEVEK 63

Query: 64  DGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLAQDD 123
           D  N +DC KLS+AFLQELSTFEIPLLKSKAV+DAN+REKE+F+E KDEIN+QI L Q D
Sbjct: 64  DEENYNDCAKLSKAFLQELSTFEIPLLKSKAVIDANLREKENFNELKDEINRQISLVQTD 123

Query: 124 IEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENTASSR 183
           IE+LKKQLEESKIERQHKEECEAIRKLI+AQPPRS TQK+I+++EKEIAAL++ENTA SR
Sbjct: 124 IEELKKQLEESKIERQHKEECEAIRKLISAQPPRSETQKSIIEIEKEIAALEAENTAGSR 183

Query: 184 MLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDASGSLEAMAVD 242
           +LELRKKQFALLLHVVDELQNTIE++QKSLIEE R+  EE K G++DASG  EAMAVD
Sbjct: 184 LLELRKKQFALLLHVVDELQNTIEEDQKSLIEEMRMVTEEQKSGMEDASGGSEAMAVD 241

[Close]

BLAST of Cucsa.318720 vs. TrEMBL
Match: A0A0D2MJK9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G054000 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 5.5e-102
Identity = 192/238 (80.67%), Postives = 214/238 (89.92%), Query Frame = 1


Query: 4   RARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEK 63
           + RKVS RGE V ANYAFGP EDD IIKHRLLTRTTTTRGEPPLKKLQ+KFTSFVLE+EK
Sbjct: 4   KGRKVSGRGETVTANYAFGPAEDDAIIKHRLLTRTTTTRGEPPLKKLQRKFTSFVLEVEK 63

Query: 64  DGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLAQDD 123
           D  N +DC KLS+AFLQELSTFEIPLLKSKAV+DAN+REKE+F+E KDEIN+QI L Q D
Sbjct: 64  DEENYNDCAKLSKAFLQELSTFEIPLLKSKAVIDANLREKENFNELKDEINRQISLVQTD 123

Query: 124 IEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENTASSR 183
           IE+LKKQLEESKIERQHKEECEAIRKLI+AQPPRS TQK+I ++EKEIAAL++ENTA SR
Sbjct: 124 IEELKKQLEESKIERQHKEECEAIRKLISAQPPRSETQKSIREIEKEIAALEAENTAGSR 183

Query: 184 MLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDASGSLEAMAVD 242
           +LELRKKQFALLLHVVDELQNTIE++QKSLIEE R+  EE K G+DDASG  EAMAVD
Sbjct: 184 LLELRKKQFALLLHVVDELQNTIEEDQKSLIEEMRMVTEEQKSGMDDASGGSEAMAVD 241

[Close]

BLAST of Cucsa.318720 vs. TrEMBL
Match: W9QYK8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019670 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 2.8e-101
Identity = 194/242 (80.17%), Postives = 217/242 (89.67%), Query Frame = 1


Query: 1   MSVRARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60
           M  + RKVS RGEAVAANYAFGPLEDD+IIKHRLLTRTTTTRGEPPLKKLQKKFTSF  E
Sbjct: 1   MLAKGRKVSGRGEAVAANYAFGPLEDDIIIKHRLLTRTTTTRGEPPLKKLQKKFTSFFTE 60

Query: 61  IEK-DGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILL 120
           I+K D  N  DCEKL++AFLQELSTFEIPLLKS+AVV+ANIREKE+FHE K+EIN+QI+ 
Sbjct: 61  IDKNDDKNFADCEKLAKAFLQELSTFEIPLLKSRAVVEANIREKENFHELKEEINRQIVQ 120

Query: 121 AQDDIEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENT 180
           AQ DIEDLKKQLE+SKIER+HKEECEAIRKLIAAQPPRS TQK I +LEKEIAALD+ENT
Sbjct: 121 AQSDIEDLKKQLEQSKIERRHKEECEAIRKLIAAQPPRSETQKLIAELEKEIAALDAENT 180

Query: 181 ASSRMLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDASGSLEAMA 240
           ASSR+LELRKKQF+LLLHVVDELQNTIE++QK+LIEE R+  EE K G++DA G  EAMA
Sbjct: 181 ASSRLLELRKKQFSLLLHVVDELQNTIEEDQKNLIEEMRLATEEQKNGLEDAIGGSEAMA 240

Query: 241 VD 242
           VD
Sbjct: 241 VD 242

[Close]

BLAST of Cucsa.318720 vs. TAIR10
Match: AT5G16790.1 (AT5G16790.1 Tho complex subunit 7/Mft1p)

HSP 1 Score: 320.5 bits (820), Expect = 9.1e-88
Identity = 172/242 (71.07%), Postives = 201/242 (83.06%), Query Frame = 1


Query: 1   MSVRARK-VSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVL 60
           MSVRAR+ VS R E VAANYAF PL DD II++RLLTRTTTTRGEPPLKKLQKKFTSFV+
Sbjct: 1   MSVRARRIVSGRSETVAANYAFDPLHDDKIIRNRLLTRTTTTRGEPPLKKLQKKFTSFVI 60

Query: 61  EIEKDGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILL 120
           E++K+  N  +C +L++AFLQELS FEIPLLKS+ VV AN+REKE+F+E KDE N+QI+ 
Sbjct: 61  ELDKEEDNYSECGRLAKAFLQELSAFEIPLLKSQVVVAANLREKENFNELKDETNRQIMQ 120

Query: 121 AQDDIEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENT 180
           AQ DIEDLKKQLEESKIERQ KEECEAIRKLI+AQPPRS TQK I +L+KEIA L++ENT
Sbjct: 121 AQADIEDLKKQLEESKIERQQKEECEAIRKLISAQPPRSETQKVIHELKKEIAELEAENT 180

Query: 181 ASSRMLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDASGSLEAMA 240
           AS R+LELRKKQFALLLHVVDELQ T+EDEQKS++EE      +  I  D A    EAM+
Sbjct: 181 ASWRLLELRKKQFALLLHVVDELQETMEDEQKSMVEEM-----QRNITADGA----EAMS 233

Query: 241 VD 242
           +D
Sbjct: 241 ID 233

[Close]

BLAST of Cucsa.318720 vs. TAIR10
Match: AT3G02950.1 (AT3G02950.1 Tho complex subunit 7/Mft1p)

HSP 1 Score: 318.9 bits (816), Expect = 2.6e-87
Identity = 164/233 (70.39%), Postives = 202/233 (86.70%), Query Frame = 1


Query: 1   MSVRARKVSTRGEAVAA--NYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFV 60
           MSV+AR++S R E V    NYAF P++DD II++RLLTRTTTTRGEPPLKKLQKKFTSFV
Sbjct: 1   MSVKARRISGRLETVVTKVNYAFDPVDDDKIIRNRLLTRTTTTRGEPPLKKLQKKFTSFV 60

Query: 61  LEIEKDGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQIL 120
           LE++K+  N +DC +L++AFLQELSTFEIPLLKS+AVV+AN+REKESF+E KDE  +QI+
Sbjct: 61  LEVDKEEENYNDCGRLAKAFLQELSTFEIPLLKSQAVVEANLREKESFNEVKDETERQIM 120

Query: 121 LAQDDIEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSEN 180
            A+ +IEDLKKQLEESKI+RQHKEECE IRKLI+AQPPRS T+K I +L KEIA L++E+
Sbjct: 121 QAKAEIEDLKKQLEESKIDRQHKEECETIRKLISAQPPRSETEKVIYELNKEIAELEAES 180

Query: 181 TASSRMLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDA 232
           TAS R+LELRKKQFALL+HVVDELQNT+EDEQKSL++E R +A E++  + DA
Sbjct: 181 TASWRLLELRKKQFALLMHVVDELQNTMEDEQKSLVDEIR-SASEDQRNITDA 232

[Close]

BLAST of Cucsa.318720 vs. NCBI nr
Match: gi|778673878|ref|XP_011650079.1| (PREDICTED: THO complex subunit 7A-like [Cucumis sativus])

HSP 1 Score: 461.5 bits (1186), Expect = 9.3e-127
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1


Query: 1   MSVRARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60
           MSVRARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE
Sbjct: 1   MSVRARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60

Query: 61  IEKDGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLA 120
           IEKDGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLA
Sbjct: 61  IEKDGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLA 120

Query: 121 QDDIEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENTA 180
           QDDIEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENTA
Sbjct: 121 QDDIEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENTA 180

Query: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDASGSLEAMAV 240
           SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDASGSLEAMAV
Sbjct: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDASGSLEAMAV 240

Query: 241 D 242
           D
Sbjct: 241 D 241

[Close]

BLAST of Cucsa.318720 vs. NCBI nr
Match: gi|659118570|ref|XP_008459188.1| (PREDICTED: THO complex subunit 7A-like isoform X1 [Cucumis melo])

HSP 1 Score: 456.1 bits (1172), Expect = 3.9e-125
Identity = 237/241 (98.34%), Postives = 239/241 (99.17%), Query Frame = 1


Query: 1   MSVRARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60
           MSVRARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE
Sbjct: 1   MSVRARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60

Query: 61  IEKDGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLA 120
           IEKDGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLA
Sbjct: 61  IEKDGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLA 120

Query: 121 QDDIEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENTA 180
           QDDIEDLKKQLEESKIERQHKEECEAIRKLIA QPPRSVTQKTIVDLEKEIAALD+ENTA
Sbjct: 121 QDDIEDLKKQLEESKIERQHKEECEAIRKLIATQPPRSVTQKTIVDLEKEIAALDAENTA 180

Query: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDASGSLEAMAV 240
           SSRMLELRKKQFALLLHVVDELQNTIEDEQK+LIEETRITAEENKIGVDDASGSLE MAV
Sbjct: 181 SSRMLELRKKQFALLLHVVDELQNTIEDEQKNLIEETRITAEENKIGVDDASGSLETMAV 240

Query: 241 D 242
           D
Sbjct: 241 D 241

[Close]

BLAST of Cucsa.318720 vs. NCBI nr
Match: gi|590639213|ref|XP_007029607.1| (Tho complex subunit 7/Mft1p [Theobroma cacao])

HSP 1 Score: 382.1 bits (980), Expect = 7.2e-103
Identity = 193/238 (81.09%), Postives = 217/238 (91.18%), Query Frame = 1


Query: 4   RARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEK 63
           + RKVS+RGE VAANYAFGP EDD+IIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE+EK
Sbjct: 4   KGRKVSSRGETVAANYAFGPAEDDIIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEVEK 63

Query: 64  DGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLAQDD 123
           D  N ++C KLS++FLQELSTFEIPLLKSKAV+DAN+REKE+F+E KDEIN+QIL AQ D
Sbjct: 64  DEDNYNECAKLSKSFLQELSTFEIPLLKSKAVIDANLREKENFNELKDEINRQILQAQTD 123

Query: 124 IEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENTASSR 183
           IEDLKKQLEESKIERQHKEECEAIRKLI+AQPPRS TQK+I +LEKEIAA ++ENTA SR
Sbjct: 124 IEDLKKQLEESKIERQHKEECEAIRKLISAQPPRSETQKSITELEKEIAAWEAENTAGSR 183

Query: 184 MLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDASGSLEAMAVD 242
           +LELRKKQFALLLHVVDELQNTIE+EQKSLIEE R+  EE K G++DA+G  EAMAVD
Sbjct: 184 LLELRKKQFALLLHVVDELQNTIEEEQKSLIEEMRMVTEEQKSGMEDANGGSEAMAVD 241

[Close]

BLAST of Cucsa.318720 vs. NCBI nr
Match: gi|728849147|gb|KHG28590.1| (THO complex subunit 7 [Gossypium arboreum])

HSP 1 Score: 379.4 bits (973), Expect = 4.7e-102
Identity = 191/238 (80.25%), Postives = 215/238 (90.34%), Query Frame = 1


Query: 4   RARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLEIEK 63
           + RKVS RGE V ANYAFGP EDD IIKHRLLTRTTTTRGEPPLKKLQ+KFTSFVLE+EK
Sbjct: 4   KGRKVSGRGETVTANYAFGPAEDDAIIKHRLLTRTTTTRGEPPLKKLQRKFTSFVLEVEK 63

Query: 64  DGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLAQDD 123
           D  N +DC KLS+AFLQELSTFEIPLLKSKAV+DAN+REKE+F+E KDEIN+QI L Q D
Sbjct: 64  DEENYNDCAKLSKAFLQELSTFEIPLLKSKAVIDANLREKENFNELKDEINRQISLVQTD 123

Query: 124 IEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENTASSR 183
           IE+LKKQLEESKIERQHKEECEAIRKLI+AQPPRS TQK+I+++EKEIAAL++ENTA SR
Sbjct: 124 IEELKKQLEESKIERQHKEECEAIRKLISAQPPRSETQKSIIEIEKEIAALEAENTAGSR 183

Query: 184 MLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDASGSLEAMAVD 242
           +LELRKKQFALLLHVVDELQNTIE++QKSLIEE R+  EE K G++DASG  EAMAVD
Sbjct: 184 LLELRKKQFALLLHVVDELQNTIEEDQKSLIEEMRMVTEEQKSGMEDASGGSEAMAVD 241

[Close]

BLAST of Cucsa.318720 vs. NCBI nr
Match: gi|659118572|ref|XP_008459189.1| (PREDICTED: THO complex subunit 7A-like isoform X2 [Cucumis melo])

HSP 1 Score: 379.0 bits (972), Expect = 6.1e-102
Identity = 196/198 (98.99%), Postives = 197/198 (99.49%), Query Frame = 1


Query: 1   MSVRARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60
           MSVRARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE
Sbjct: 1   MSVRARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE 60

Query: 61  IEKDGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLA 120
           IEKDGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLA
Sbjct: 61  IEKDGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLA 120

Query: 121 QDDIEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENTA 180
           QDDIEDLKKQLEESKIERQHKEECEAIRKLIA QPPRSVTQKTIVDLEKEIAALD+ENTA
Sbjct: 121 QDDIEDLKKQLEESKIERQHKEECEAIRKLIATQPPRSVTQKTIVDLEKEIAALDAENTA 180

Query: 181 SSRMLELRKKQFALLLHV 199
           SSRMLELRKKQFALLLHV
Sbjct: 181 SSRMLELRKKQFALLLHV 198

The following BLAST results are available for this feature:

BLAST of Cucsa.318720 vs. Swiss-Prot


Match Name	E-value	Identity	Description
THO7A_ARATH	1.6e-86	71.07	THO complex subunit 7A OS=Arabidopsis thaliana GN=THO7A PE=1 SV=1	[more]
THO7B_ARATH	4.7e-86	70.39	THO complex subunit 7B OS=Arabidopsis thaliana GN=THO7B PE=1 SV=1	[more]
THOC7_XENLA	1.4e-18	31.37	THO complex subunit 7 homolog OS=Xenopus laevis GN=thoc7 PE=2 SV=1	[more]
THOC7_NEMVE	4.2e-18	31.55	THO complex subunit 7 homolog OS=Nematostella vectensis GN=thoc7 PE=3 SV=1	[more]
THOC7_HUMAN	7.1e-18	32.51	THO complex subunit 7 homolog OS=Homo sapiens GN=THOC7 PE=1 SV=3	[more]

BLAST of Cucsa.318720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRG7_CUCSA	6.5e-127	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G437120 PE=4 SV=1	[more]
A0A061F6H5_THECC	5.0e-103	81.09	Tho complex subunit 7/Mft1p OS=Theobroma cacao GN=TCM_025487 PE=4 SV=1	[more]
A0A0B0PUA3_GOSAR	3.3e-102	80.25	THO complex subunit 7 OS=Gossypium arboreum GN=F383_12023 PE=4 SV=1	[more]
A0A0D2MJK9_GOSRA	5.5e-102	80.67	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G054000 PE=4 SV=1	[more]
W9QYK8_9ROSA	2.8e-101	80.17	Uncharacterized protein OS=Morus notabilis GN=L484_019670 PE=4 SV=1	[more]

BLAST of Cucsa.318720 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16790.1	9.1e-88	71.07	Tho complex subunit 7/Mft1p	[more]
AT3G02950.1	2.6e-87	70.39	Tho complex subunit 7/Mft1p	[more]

BLAST of Cucsa.318720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778673878\|ref\|XP_011650079.1\|	9.3e-127	100.00	PREDICTED: THO complex subunit 7A-like [Cucumis sativus]	[more]
gi\|659118570\|ref\|XP_008459188.1\|	3.9e-125	98.34	PREDICTED: THO complex subunit 7A-like isoform X1 [Cucumis melo]	[more]
gi\|590639213\|ref\|XP_007029607.1\|	7.2e-103	81.09	Tho complex subunit 7/Mft1p [Theobroma cacao]	[more]
gi\|728849147\|gb\|KHG28590.1\|	4.7e-102	80.25	THO complex subunit 7 [Gossypium arboreum]	[more]
gi\|659118572\|ref\|XP_008459189.1\|	6.1e-102	98.99	PREDICTED: THO complex subunit 7A-like isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008501	THOC7/Mft1
IPR008501	THOC7/Mft1

Vocabulary: **Cellular Component**
Term	Definition
GO:0000445	THO complex part of transcription export complex
GO:0000445	THO complex part of transcription export complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006397	mRNA processing
GO:0006397	mRNA processing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0000445	THO complex part of transcription export complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.318720.3	Cucsa.318720.3	mRNA
Cucsa.318720.1	Cucsa.318720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008501	THO complex subunit 7/Mft1	PFAM	PF05615	THOC7	coord: 27..164 score: 2.2
None	No IPR available	unknown	Coil	Coil	coord: 110..144 score: -coord: 157..177 score: -coord: 199..219 scor
None	No IPR available	PANTHER	PTHR23405	MAINTENANCE OF KILLER 16 MAK16 PROTEIN-RELATED	coord: 24..241 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.318720	Cla012997	Watermelon (97103) v1	cgywmB580
Cucsa.318720	Csa2G437120	Cucumber (Chinese Long) v2	cgycuB456
Cucsa.318720	MELO3C021887	Melon (DHL92) v3.5.1	cgymeB525
Cucsa.318720	ClCG09G016930	Watermelon (Charleston Gray)	cgywcgB551
Cucsa.318720	CSPI02G27770	Wild cucumber (PI 183967)	cgycpiB481
Cucsa.318720	CmaCh20G009190	Cucurbita maxima (Rimu)	cgycmaB0881
Cucsa.318720	CmaCh02G004600	Cucurbita maxima (Rimu)	cgycmaB0882
Cucsa.318720	CmoCh20G009260	Cucurbita moschata (Rifu)	cgycmoB0878
Cucsa.318720	CmoCh02G004680	Cucurbita moschata (Rifu)	cgycmoB0879
Cucsa.318720	Lsi10G002620	Bottle gourd (USVL1VR-Ls)	cgylsiB520
Cucsa.318720	Cp4.1LG16g01830	Cucurbita pepo (Zucchini)	cgycpeB0837
Cucsa.318720	Cp4.1LG05g11990	Cucurbita pepo (Zucchini)	cgycpeB0838
Cucsa.318720	MELO3C021887.2	Melon (DHL92) v3.6.1	cgymedB526
Cucsa.318720	CsaV3_2G036420	Cucumber (Chinese Long) v3	cgycucB495
Cucsa.318720	Cla97C09G178520	Watermelon (97103) v2	cgywmbB556
Cucsa.318720	Bhi10G001315	Wax gourd	cgywgoB638
Cucsa.318720	Carg27478	Silver-seed gourd	carcgyB0622
Cucsa.318720	Carg24042	Silver-seed gourd	carcgyB1170

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.318720	Melon (DHL92) v3.5.1	cgymeB524
Cucsa.318720	Melon (DHL92) v3.6.1	cgymedB525