Cucsa.306810 (gene) Cucumber (Gy14) v1

NameCucsa.306810
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionDVL family protein
Locationscaffold02977 : 230338 .. 230468 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCAGGTGAGTGCAAGTCTTTTGGTGAAAAGTGTAACAATTTGGTGAAGAAACAAAGGACTAAATTTTATATTTTTAGAAGGTGCATTGCTATGCTTGTTTGTTGGAGAGACAGAGGAGAATCTTAA

mRNA sequence

ATGATGCAGGTGAGTGCAAGTCTTTTGGTGAAAAGTGTAACAATTTGGTGAAGAAACAAAGGACTAAATTTTATATTTTTAGAAGGTGCATTGCTATGCTTGTTTGTTGGAGAGACAGAGGAGAATCTTAA

Coding sequence (CDS)

ATGATGCAGGTGAGTGCAAGTCTTTTGGTGAAAAGTGTAACAATTTGGTGAAGAAACAAAGGACTAAATTTTATATTTTTAGAAGGTGCATTGCTATGCTTGTTTGTTGGAGAGACAGAGGAGAATCTTAA

Protein sequence

DAGECKSFGEKCNNLVKKQRTKFYIFRRCIAMLVCWRDRGES*
BLAST of Cucsa.306810 vs. TrEMBL
Match: A0A0D2SZ62_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_006G164900 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.0e-11
Identity = 31/37 (83.78%), Postives = 35/37 (94.59%), Query Frame = 1

Query: 5  CKSFGEKCNNLVKKQRTKFYIFRRCIAMLVCWRDRGE 42
          C+SFG+KC++LVKKQR KFYI RRCIAMLVCWRDRGE
Sbjct: 44 CRSFGQKCSHLVKKQRAKFYILRRCIAMLVCWRDRGE 80

BLAST of Cucsa.306810 vs. TrEMBL
Match: W9RX46_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024356 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 6.8e-11
Identity = 30/37 (81.08%), Postives = 35/37 (94.59%), Query Frame = 1

Query: 5  CKSFGEKCNNLVKKQRTKFYIFRRCIAMLVCWRDRGE 42
          C+SFG+KC++LVKKQR KFYI RRCIAMLVCWRDRG+
Sbjct: 38 CRSFGQKCSHLVKKQRAKFYILRRCIAMLVCWRDRGD 74

BLAST of Cucsa.306810 vs. TrEMBL
Match: V7D0S6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G178700g PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.6e-10
Identity = 29/38 (76.32%), Postives = 35/38 (92.11%), Query Frame = 1

Query: 5  CKSFGEKCNNLVKKQRTKFYIFRRCIAMLVCWRDRGES 43
          CKSFG+KC++LVKKQR KFYI RRCIAML+CW +RGE+
Sbjct: 55 CKSFGQKCSHLVKKQRAKFYILRRCIAMLLCWHERGET 92

BLAST of Cucsa.306810 vs. TrEMBL
Match: A0A0L9TFS4_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan641s009400 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.6e-10
Identity = 29/38 (76.32%), Postives = 35/38 (92.11%), Query Frame = 1

Query: 5  CKSFGEKCNNLVKKQRTKFYIFRRCIAMLVCWRDRGES 43
          CKSFG+KC++LVKKQR KFYI RRCIAML+CW +RGE+
Sbjct: 32 CKSFGQKCSHLVKKQRAKFYILRRCIAMLLCWHERGET 69

BLAST of Cucsa.306810 vs. TrEMBL
Match: A0A0S3RYX5_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G330700 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.6e-10
Identity = 29/38 (76.32%), Postives = 35/38 (92.11%), Query Frame = 1

Query: 5  CKSFGEKCNNLVKKQRTKFYIFRRCIAMLVCWRDRGES 43
          CKSFG+KC++LVKKQR KFYI RRCIAML+CW +RGE+
Sbjct: 32 CKSFGQKCSHLVKKQRAKFYILRRCIAMLLCWHERGET 69

BLAST of Cucsa.306810 vs. TAIR10
Match: AT2G36985.1 (AT2G36985.1 DVL family protein)

HSP 1 Score: 65.9 bits (159), Expect = 7.2e-12
Identity = 26/35 (74.29%), Postives = 32/35 (91.43%), Query Frame = 1

Query: 5  CKSFGEKCNNLVKKQRTKFYIFRRCIAMLVCWRDR 40
          CK+FG+KC+++VKKQR KFYI RRCIAMLVCW D+
Sbjct: 12 CKTFGQKCSHVVKKQRAKFYILRRCIAMLVCWHDQ 46

BLAST of Cucsa.306810 vs. TAIR10
Match: AT2G39705.1 (AT2G39705.1 ROTUNDIFOLIA like 8)

HSP 1 Score: 53.5 bits (127), Expect = 3.7e-08
Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 1

Query: 3  GECKSFGEKCNNLVKKQRTKFYIFRRCIAMLVCWRD 39
          G C +F  KC  LVK+QR +FYI RRC+ ML+CWRD
Sbjct: 48 GRC-AFTRKCARLVKEQRARFYIMRRCVIMLICWRD 82

BLAST of Cucsa.306810 vs. TAIR10
Match: AT3G55515.1 (AT3G55515.1 ROTUNDIFOLIA like 7)

HSP 1 Score: 51.2 bits (121), Expect = 1.8e-07
Identity = 19/35 (54.29%), Postives = 24/35 (68.57%), Query Frame = 1

Query: 8  FGEKCNNLVKKQRTKFYIFRRCIAMLVCWRDRGES 43
          F  KC  LVK+QR +FYI RRC+ ML+CW D   +
Sbjct: 40 FTRKCGRLVKEQRARFYIMRRCVVMLICWTDHNNN 74

BLAST of Cucsa.306810 vs. TAIR10
Match: AT3G53232.1 (AT3G53232.1 ROTUNDIFOLIA like 1)

HSP 1 Score: 50.1 bits (118), Expect = 4.1e-07
Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 1

Query: 2  AGECK---SFGEKCNNLVKKQRTKFYIFRRCIAMLVCWRDR 40
          +G CK   +F  KC+++V+KQR KFYI  RC+AMLVC R R
Sbjct: 8  SGTCKPSKTFKAKCSHMVRKQRAKFYILGRCLAMLVCGRGR 48

BLAST of Cucsa.306810 vs. TAIR10
Match: AT4G13395.1 (AT4G13395.1 ROTUNDIFOLIA like 12)

HSP 1 Score: 48.9 bits (115), Expect = 9.1e-07
Identity = 18/35 (51.43%), Postives = 26/35 (74.29%), Query Frame = 1

Query: 8  FGEKCNNLVKKQRTKFYIFRRCIAMLVCWRDRGES 43
          FG++C  + K+QRT+ YI RRC++ML+CW D   S
Sbjct: 20 FGDRCLLMAKQQRTRLYILRRCVSMLLCWHDHSIS 54

BLAST of Cucsa.306810 vs. NCBI nr
Match: gi|659085736|ref|XP_008443575.1| (PREDICTED: uncharacterized protein LOC103487131 [Cucumis melo])

HSP 1 Score: 90.5 bits (223), Expect = 7.7e-16
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 1

Query: 1  DAGECKSFGEKCNNLVKKQRTKFYIFRRCIAMLVCWRDRGES 43
          +AGECKSFGEKCNNLVKKQRTKFYI RRCIAMLVCWRDRGES
Sbjct: 37 NAGECKSFGEKCNNLVKKQRTKFYILRRCIAMLVCWRDRGES 78

BLAST of Cucsa.306810 vs. NCBI nr
Match: gi|763769340|gb|KJB36555.1| (hypothetical protein B456_006G164900, partial [Gossypium raimondii])

HSP 1 Score: 74.7 bits (182), Expect = 4.4e-11
Identity = 31/37 (83.78%), Postives = 35/37 (94.59%), Query Frame = 1

Query: 5  CKSFGEKCNNLVKKQRTKFYIFRRCIAMLVCWRDRGE 42
          C+SFG+KC++LVKKQR KFYI RRCIAMLVCWRDRGE
Sbjct: 44 CRSFGQKCSHLVKKQRAKFYILRRCIAMLVCWRDRGE 80

BLAST of Cucsa.306810 vs. NCBI nr
Match: gi|703141449|ref|XP_010107504.1| (hypothetical protein L484_024356 [Morus notabilis])

HSP 1 Score: 73.6 bits (179), Expect = 9.7e-11
Identity = 30/37 (81.08%), Postives = 35/37 (94.59%), Query Frame = 1

Query: 5  CKSFGEKCNNLVKKQRTKFYIFRRCIAMLVCWRDRGE 42
          C+SFG+KC++LVKKQR KFYI RRCIAMLVCWRDRG+
Sbjct: 38 CRSFGQKCSHLVKKQRAKFYILRRCIAMLVCWRDRGD 74

BLAST of Cucsa.306810 vs. NCBI nr
Match: gi|985470284|ref|XP_015380955.1| (PREDICTED: uncharacterized protein LOC102612545 [Citrus sinensis])

HSP 1 Score: 72.0 bits (175), Expect = 2.8e-10
Identity = 29/37 (78.38%), Postives = 35/37 (94.59%), Query Frame = 1

Query: 5  CKSFGEKCNNLVKKQRTKFYIFRRCIAMLVCWRDRGE 42
          C+SFG+KC++LVKKQR KFYI RRCIAMLVCWR+RG+
Sbjct: 22 CRSFGQKCSHLVKKQRAKFYILRRCIAMLVCWRERGD 58

BLAST of Cucsa.306810 vs. NCBI nr
Match: gi|950948658|ref|XP_014494999.1| (PREDICTED: uncharacterized protein LOC106756915 [Vigna radiata var. radiata])

HSP 1 Score: 71.6 bits (174), Expect = 3.7e-10
Identity = 29/38 (76.32%), Postives = 35/38 (92.11%), Query Frame = 1

Query: 5  CKSFGEKCNNLVKKQRTKFYIFRRCIAMLVCWRDRGES 43
          CKSFG+KC++LVKKQR KFYI RRCIAML+CW +RGE+
Sbjct: 28 CKSFGQKCSHLVKKQRAKFYILRRCIAMLLCWHERGET 65

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0D2SZ62_GOSRA3.0e-1183.78Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_006G164900 PE=... [more]
W9RX46_9ROSA6.8e-1181.08Uncharacterized protein OS=Morus notabilis GN=L484_024356 PE=4 SV=1[more]
V7D0S6_PHAVU2.6e-1076.32Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G178700g PE=4 SV=1[more]
A0A0L9TFS4_PHAAN2.6e-1076.32Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan641s009400 PE=4 SV=1[more]
A0A0S3RYX5_PHAAN2.6e-1076.32Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G330700 PE=... [more]
Match NameE-valueIdentityDescription
AT2G36985.17.2e-1274.29 DVL family protein[more]
AT2G39705.13.7e-0861.11 ROTUNDIFOLIA like 8[more]
AT3G55515.11.8e-0754.29 ROTUNDIFOLIA like 7[more]
AT3G53232.14.1e-0756.10 ROTUNDIFOLIA like 1[more]
AT4G13395.19.1e-0751.43 ROTUNDIFOLIA like 12[more]
Match NameE-valueIdentityDescription
gi|659085736|ref|XP_008443575.1|7.7e-1695.24PREDICTED: uncharacterized protein LOC103487131 [Cucumis melo][more]
gi|763769340|gb|KJB36555.1|4.4e-1183.78hypothetical protein B456_006G164900, partial [Gossypium raimondii][more]
gi|703141449|ref|XP_010107504.1|9.7e-1181.08hypothetical protein L484_024356 [Morus notabilis][more]
gi|985470284|ref|XP_015380955.1|2.8e-1078.38PREDICTED: uncharacterized protein LOC102612545 [Citrus sinensis][more]
gi|950948658|ref|XP_014494999.1|3.7e-1076.32PREDICTED: uncharacterized protein LOC106756915 [Vigna radiata var. radiata][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012552DVL
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.306810.1Cucsa.306810.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012552DVLPFAMPF08137DVLcoord: 17..35
score: 1.3
NoneNo IPR availablePANTHERPTHR33102FAMILY NOT NAMEDcoord: 5..42
score: 3.0

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.306810Cla017809Watermelon (97103) v1cgywmB553
Cucsa.306810CmaCh03G012170Cucurbita maxima (Rimu)cgycmaB0844
Cucsa.306810CmaCh06G003860Cucurbita maxima (Rimu)cgycmaB0846
Cucsa.306810CsaV3_6G039840Cucumber (Chinese Long) v3cgycucB476
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.306810Watermelon (97103) v2cgywmbB529
Cucsa.306810Watermelon (97103) v2cgywmbB530
Cucsa.306810Watermelon (97103) v2cgywmbB532
Cucsa.306810Wax gourdcgywgoB610
Cucsa.306810Wax gourdcgywgoB612
Cucsa.306810Wax gourdcgywgoB614
Cucsa.306810Cucumber (Gy14) v1cgycgyB074
Cucsa.306810Cucumber (Gy14) v1cgycgyB143
Cucsa.306810Cucumber (Gy14) v1cgycgyB144
Cucsa.306810Cucurbita maxima (Rimu)cgycmaB0841
Cucsa.306810Cucurbita maxima (Rimu)cgycmaB0842
Cucsa.306810Cucurbita maxima (Rimu)cgycmaB0847
Cucsa.306810Cucurbita moschata (Rifu)cgycmoB0837
Cucsa.306810Cucurbita moschata (Rifu)cgycmoB0838
Cucsa.306810Cucurbita moschata (Rifu)cgycmoB0839
Cucsa.306810Cucurbita moschata (Rifu)cgycmoB0841
Cucsa.306810Cucurbita moschata (Rifu)cgycmoB0844
Cucsa.306810Cucurbita moschata (Rifu)cgycmoB0845
Cucsa.306810Wild cucumber (PI 183967)cgycpiB459
Cucsa.306810Wild cucumber (PI 183967)cgycpiB462
Cucsa.306810Wild cucumber (PI 183967)cgycpiB463
Cucsa.306810Cucumber (Chinese Long) v2cgycuB436
Cucsa.306810Cucumber (Chinese Long) v2cgycuB439
Cucsa.306810Cucumber (Chinese Long) v2cgycuB440
Cucsa.306810Melon (DHL92) v3.5.1cgymeB503
Cucsa.306810Melon (DHL92) v3.5.1cgymeB504
Cucsa.306810Melon (DHL92) v3.5.1cgymeB507
Cucsa.306810Watermelon (Charleston Gray)cgywcgB525
Cucsa.306810Watermelon (Charleston Gray)cgywcgB526
Cucsa.306810Watermelon (Charleston Gray)cgywcgB528
Cucsa.306810Watermelon (97103) v1cgywmB554
Cucsa.306810Watermelon (97103) v1cgywmB555
Cucsa.306810Cucurbita pepo (Zucchini)cgycpeB0798
Cucsa.306810Cucurbita pepo (Zucchini)cgycpeB0799
Cucsa.306810Cucurbita pepo (Zucchini)cgycpeB0800
Cucsa.306810Cucurbita pepo (Zucchini)cgycpeB0801
Cucsa.306810Cucurbita pepo (Zucchini)cgycpeB0802
Cucsa.306810Bottle gourd (USVL1VR-Ls)cgylsiB493
Cucsa.306810Bottle gourd (USVL1VR-Ls)cgylsiB494
Cucsa.306810Bottle gourd (USVL1VR-Ls)cgylsiB495
Cucsa.306810Melon (DHL92) v3.6.1cgymedB502
Cucsa.306810Melon (DHL92) v3.6.1cgymedB503
Cucsa.306810Melon (DHL92) v3.6.1cgymedB504
Cucsa.306810Melon (DHL92) v3.6.1cgymedB507
Cucsa.306810Silver-seed gourdcarcgyB0196
Cucsa.306810Silver-seed gourdcarcgyB0295
Cucsa.306810Cucumber (Chinese Long) v3cgycucB472
Cucsa.306810Cucumber (Chinese Long) v3cgycucB475
Cucsa.306810Cucumber (Chinese Long) v3cgycucB477