Cucsa.306700 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAGCTTCTCCTTTCCTATTCTCCCCTTCGGTCGGTTGCCATTTTTCATCCTCAGATTCTTCACCCCCTTCTTCACATTCTTCCATTCTCTCCACACCAATTCCCAATTCCCCATTCTTCTCATTTCTCAATGCTCTCATCCATGGCCGACCCTTCTCTTTCCTTCTCTTTCTCTTCCTTCTCCTCCCAACCTTCCCTCCACCTTTCCCCCTCTTTCCTCCCACACCCTTTTCTTTTTTCTCCCAAATTCTCACTCTCCCATCATCGCCCATCTCCTCTCCTTCGTTTCTCCCTCAAATCCTCCTACTCTGGAGGCTTCATGGGTGACGACGATTCATTCGGATTGTTTCCTTGGGCCGACGGTGATTCTGGTACGTTTCTTCTTCTTCATCTTTCGTTCTTAACAAATCTGTTGCTTATGCTGAAGGACCGATGCGTATGGTTACGTTATTTACATTTCCCCCAATTCTATTTACCTGATTTGGTGAGATTATGTTTGATTCCAAATGGGGTTTCCCCCCTTTTATTTTATTGATTGAGTAAAAGGGTTTTTTTTTTTCTTTTTTAAAAAGTTTGTTCTGTTGTTACGGTATGAGGGTGGTTTTCGTAATTCGAGTGATGGGAATGAAATGAATTATTTGGGTTCTGTTTTATTTATGAAGTCAATCTATCTTGTACAAGGGATTGCTTAAATTGAAATTGTGTACAGAAATCCATTGGCTTCCTGAGGAGAGAGTCACATTGTTCACCCCTGATGGACTGGTTCAGATTGGAGGCTCCATTGTCCCTCGAAGAATTTCTTCTTCAGATGTATGTCCTACAACCCCTTTGTTATTTTTCAGTTAAAACTGGCAATTACAGTGTGTTTTGTATTGTTATGTGTAAGTTGTTGCAATCTGGTTCGTGTTTCGATCAAATGGATGTTCTTTTGACAGAAAAAACAAGGGAAATCGAAAACTTCCCAAAGATTCCAACGGTTTCAAGAGAGTGATTACATGGATCCAAAACAGAGCATATGTCTTGGTGCTCTATTTGATATTGCAGCAACAAATGTGAGCCCATTTGGACAGTGTTGTATTGAGTTAAAGCCTTAACGGATTTGTCTTATGCTTTACTCACTCTGTTTAGGGACTTGACATGGGAAGAAGACTTTGTATCTTTGGCTTTTGTCGTTCTGTTGAGATGCTAAGTGATGTTGTGGAGGACATTGTTTTGGAGCAAGGTGGAGAGGTTTGTTATAAATCCATATGCACCATTTGTTCCAATGATCGTTTTGTTGATCTGGGGTGAATTTGTTTGAGTTTCATTTTTTCATTTTTTCATCTTCTGATGTTTATAGGTTGTAGCAGCAGAAAAGGCAAGTAAAGGGGGATTGCAAGAGAAGCTAACCATGACAGTTGCTGTACCACTTCTATGGGGGGTTCCTCCTGCTTCTGAGACTCTTCACTTGGCTGTTCAGAGTGGTGGAGGTATTGTGGAGAAAGTGTATTGGCAATGGGATTTTTTGTAAAGTATGATATTCTTTCAGCC CAAAGCTTCTCCTTTCCTATTCTCCCCTTCGGTCGGTTGCCATTTTTCATCCTCAGATTCTTCACCCCCTTCTTCACATTCTTCCATTCTCTCCACACCAATTCCCAATTCCCCATTCTTCTCATTTCTCAATGCTCTCATCCATGGCCGAcccttctctttccttctctttctcttccttctcctcccaaccttccctccacctttccccctctttcctcccacacccttttcttttttctcccaaattctcactctcccatcatcgcccatctcctctccttcgtttctccctcAAATCCTCCTACTCTGGAGGCTTCATGGGTGACGACGATTCATTCGGATTGTTTCCTTGGGCCGACGGTGATTCTGAAATCCATTGGCTTCCTGAGGAGAGAGTCACATTGTTCACCCCTGATGGACTGGTTCAGATTGGAGGCTCCATTGTCCCTCGAAGAATTTCTTCTTCAGATAAAAAACAAGGGAAATCGAAAACTTCCCAAAGATTCCAACGGTTTCAAGAGAGTGATTACATGGATCCAAAACAGAGCATATGTCTTGGTGCTCTATTTGATATTGCAGCAACAAATGGACTTGACATGGGAAGAAGACTTTGTATCTTTGGCTTTTGTCGTTCTGTTGAGATGCTAAGTGATGTTGTGGAGGACATTGTTTTGGAGCAAGGTGGAGAGGTTGTAGCAGCAGAAAAGGCAAGTAAAGGGGGATTGCAAGAGAAGCTAACCATGACAGTTGCTGTACCACTTCTATGGGGGGTTCCTCCTGCTTCTGAGACTCTTCACTTGGCTGTTCAGAGTGGTGGAGGTATTGTGGAGAAAGTGTATTGGCAATGGGATTTTTTGTAAAGTATGATATTCTTTCAGCC ATGCTCTCATCCATGGCCGACCCTTCTCTTTCCTTCTCTTTCTCTTCCTTCTCCTCCCAACCTTCCCTCCACCTTTCCCCCTCTTTCCTCCCACACCCTTTTCTTTTTTCTCCCAAATTCTCACTCTCCCATCATCGCCCATCTCCTCTCCTTCGTTTCTCCCTCAAATCCTCCTACTCTGGAGGCTTCATGGGTGACGACGATTCATTCGGATTGTTTCCTTGGGCCGACGGTGATTCTGAAATCCATTGGCTTCCTGAGGAGAGAGTCACATTGTTCACCCCTGATGGACTGGTTCAGATTGGAGGCTCCATTGTCCCTCGAAGAATTTCTTCTTCAGATAAAAAACAAGGGAAATCGAAAACTTCCCAAAGATTCCAACGGTTTCAAGAGAGTGATTACATGGATCCAAAACAGAGCATATGTCTTGGTGCTCTATTTGATATTGCAGCAACAAATGGACTTGACATGGGAAGAAGACTTTGTATCTTTGGCTTTTGTCGTTCTGTTGAGATGCTAAGTGATGTTGTGGAGGACATTGTTTTGGAGCAAGGTGGAGAGGTTGTAGCAGCAGAAAAGGCAAGTAAAGGGGGATTGCAAGAGAAGCTAACCATGACAGTTGCTGTACCACTTCTATGGGGGGTTCCTCCTGCTTCTGAGACTCTTCACTTGGCTGTTCAGAGTGGTGGAGGTATTGTGGAGAAAGTGTATTGGCAATGGGATTTTTTGTAA MLSSMADPSLSFSFSSFSSQPSLHLSPSFLPHPFLFSPKFSLSHHRPSPLLRFSLKSSYSGGFMGDDDSFGLFPWADGDSEIHWLPEERVTLFTPDGLVQIGGSIVPRRISSSDKKQGKSKTSQRFQRFQESDYMDPKQSICLGALFDIAATNGLDMGRRLCIFGFCRSVEMLSDVVEDIVLEQGGEVVAAEKASKGGLQEKLTMTVAVPLLWGVPPASETLHLAVQSGGGIVEKVYWQWDFL*
BLAST of Cucsa.306700 vs. TrEMBL
Match: A0A0A0LFU3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G740780 PE=4 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 5.8e-99 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 1
BLAST of Cucsa.306700 vs. TrEMBL
Match: A0A0D2NNV2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G161800 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 8.6e-95 Identity = 178/233 (76.39%), Postives = 195/233 (83.69%), Query Frame = 1
BLAST of Cucsa.306700 vs. TrEMBL
Match: A0A0B0P8I7_GOSAR (D-tagatose-1,6-bisphosphate aldolase subunit kbaZ OS=Gossypium arboreum GN=F383_27151 PE=4 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 1.9e-94 Identity = 178/233 (76.39%), Postives = 195/233 (83.69%), Query Frame = 1
BLAST of Cucsa.306700 vs. TrEMBL
Match: A0A061EU41_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_022254 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 2.6e-91 Identity = 175/229 (76.42%), Postives = 192/229 (83.84%), Query Frame = 1
BLAST of Cucsa.306700 vs. TrEMBL
Match: B9S0G7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1354530 PE=4 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 1.7e-90 Identity = 177/239 (74.06%), Postives = 194/239 (81.17%), Query Frame = 1
BLAST of Cucsa.306700 vs. TAIR10
Match: AT2G36895.1 (AT2G36895.1 unknown protein) HSP 1 Score: 308.5 bits (789), Expect = 3.6e-84 Identity = 158/239 (66.11%), Postives = 187/239 (78.24%), Query Frame = 1
BLAST of Cucsa.306700 vs. NCBI nr
Match: gi|449440135|ref|XP_004137840.1| (PREDICTED: uncharacterized protein LOC101221206 [Cucumis sativus]) HSP 1 Score: 494.2 bits (1271), Expect = 1.3e-136 Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1
BLAST of Cucsa.306700 vs. NCBI nr
Match: gi|659084102|ref|XP_008442709.1| (PREDICTED: uncharacterized protein LOC103486501 [Cucumis melo]) HSP 1 Score: 484.2 bits (1245), Expect = 1.4e-133 Identity = 238/243 (97.94%), Postives = 240/243 (98.77%), Query Frame = 1
BLAST of Cucsa.306700 vs. NCBI nr
Match: gi|700203853|gb|KGN58986.1| (hypothetical protein Csa_3G740780 [Cucumis sativus]) HSP 1 Score: 368.6 bits (945), Expect = 8.3e-99 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 1
BLAST of Cucsa.306700 vs. NCBI nr
Match: gi|823134511|ref|XP_012467058.1| (PREDICTED: uncharacterized protein LOC105785507 isoform X1 [Gossypium raimondii]) HSP 1 Score: 354.8 bits (909), Expect = 1.2e-94 Identity = 178/233 (76.39%), Postives = 195/233 (83.69%), Query Frame = 1
BLAST of Cucsa.306700 vs. NCBI nr
Match: gi|728841887|gb|KHG21330.1| (D-tagatose-1,6-bisphosphate aldolase subunit kbaZ [Gossypium arboreum]) HSP 1 Score: 353.6 bits (906), Expect = 2.8e-94 Identity = 178/233 (76.39%), Postives = 195/233 (83.69%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |