Cucsa.303820 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCATCGTTCTGAGTTTGGCGCCAAAGTTAGCTCTGTTCTCTGGGTTTCATCATTAGGGTTTCTTTGATTTGCTAAAGAATTAGGTTTCATCAATGGCTTCCTCACCTCCTTCTAAACGCCGTCGTAAAAGCCTCACTATTGATGATGCTTTTGAGACCTTACTTGCCACTTCTTCCTCTGTTAATCGATTGTCCCCTGTCGTGGTTTTCGCTCACGGTGCTGGCGCCCCTTCTTCTTCTGAATGGATGATCAGGTCTTTCTTCTCCTTTTATCTCTGCCCTTTAATTTAGTTTATGATTTACAACAACTGTGTGGCTAGGGTGATACGAATTTAGGGTTCATTTTTCAGTTATGGGGATAGTTGTTCCTTGAGCTTTGCTGCTACAGTTTACTTGCTCGGCTTTTAGAATTTATTTGTTTTTATCGTGAAGTTTAATGATTCCACATCAATCATTTTAACGGTGGAATTCTTTTTCGGTTGTGGAAATTGGGAAGTCTAGTGTGGAATTTCTTGCTGAGTGGAATTCTGTTTCTGTATCTGACCATGTTTTTTAATCTCTTTTTTTGAGATTTAAATTGTTGTATTGCCATGGTTTGCTTTTATCACGTTATTTTTTACCAATTAGTTGACCTATAAACACTAAAATTTCTCGATTGCTTCCAGATGGAAGGATATGTTAGGCAAGGCATTGCATGCCGTTGAAGTTGTCACTTTTGATTATCCATGTGAGTGCTTCACATTTAACGATACATTGGTATAGTATCGTGTTCATTTTGATATGTTACTAGTATGAAAAGAACTCGAATTTTGGTTGTTTCTTTCAATTAATCTTTTGCGTTTTGATTTGACAGATATTTCTGGTGGAAGGAAATCTCCTCCCAAGGCAGAAAAATTGGTTCCACATCATGTAGAAATTGTCAAAAGGGCAACTGCAAAGTACCCTGGGCACCCTTTGGTTTTGGCGGGTAAATCAATGGGTTCGAGGTAATAATTTTGTTTGTTTGTTTGCTTGCAATCATCCTTTTTGAAATATTTCCAAATTGTATGGTCTTTGGTCGCTATACATGGAATGAACTTCTCAAGTGTTTTAGAATTTTGATTTCTTTAGACAGTCTATTGAAATGAATGAAAATATCCCAGGTGATTTTTGGGACTAATTCACTTATTACTTTGGGGTTTTTAAACAGTATATAACTTTCTACTTCATATGTAATAAGTTTGAGATTTTCTGTCATATGTGGTTTTTACTTATTTTATTTATTGGCAGAGTAAGTTGCATGGTAGCTTGTGAGGAAGACATTCATCCTTCTGCAATTATTTGCTTGGGGTATCCCTTGAAGGTTTGAGATTATTTATGCATATCAGATTGAAAAAGCCTTCAGGCTTTAGGGTAAATAAACTGATTTTTAGTTGTGGTTTTCGTTGGAAATAATTGTTATGGTCATAACAATCTTGAGACAACCTTAATTTCTTAATAAAAAATTTGATGGGTAAATGACGTTGTCCTTCTAGAATTGCGATAAGTTAGTGCCATGACTAATATACGTTGGATTTGGACTTATACACAAATTAAAGTGTTTGGAGTTAATAGCTGTCAGTCTTAATGGGTTTGGAAGATGATTGCGGTTAAAAAATGGCAATGAAGTTGACATCTTACGCTGTATAAATGAATCTTCAAGCTTGTGCCGATTAATCATGTAAAATTGCATATTTTAGGGCTTGAAAGGGGATGTCCGAGATCAGACGCTGTTGCAAGTTACGGTTCCCATCATGTTTGTACAGGTACTTCATCTTCGCACCACTTACAGCAAAAATTGAACAATGTATCCTGCAATGTTCTCTTCCGAAATATATGAATCATAGCTCACATCTTCTGTAGCAAAGTAATAATATAGACCTGGATCCACGATGGAGCATTAACTATTGTCATGCTTTGTACTGATTGGTATAATATTTTTGTTGGTTTTCCTTTGTCAATTGGACCATGGATTGAATGTTATCATCTTGCACCTGATATTCGAGTGCTTTGAGTAGTGAATGCTGGCATGTATTGTTGATAATAGAATTTTAACAAAACATAAAACATTCAAAAACACTTGAGACATTTGATTGATGTTGAATGATATCACTGTGCCATTCAGGGTAGCAGGGATGCTCTGTGTCCTCTAGAGAAGCTGGAGGATATTCGGAAGAGGATGAAATCAATCAGTGGTTTACATGTTATTGATGGTGGTGACCATTCTTTTCAGATTTCAAAGAAATATCTTCAGGGCAAAGGTTCGAGTAAAGACGAAGCCGAAAGTCTTGCTGCTCAGGCCCTTGCAACTTTTGTTTCTGGGTTTCTTGGATGGCTTTAACTAAAGCCTTCTTTCCTTGTACAAATGTGTGTTTTAGAGGTTTAATTTGTAACATAAATGGTTGTAATGTCAGCTTATAAATTTTTCAACCAAAATTATGTACGCTAGTTTTAGTACTTCCCTTCTCTTTCTGTAGTTCTGGTCAAAAGGGAACTCATTTTCCTTTTTATTGTTTGTTGAATCCTTATATAAAATTTGAGATGCCTCTCATCTCATTTTATTTTCTCATG GTCATCGTTCTGAGTTTGGCGCCAAAGTTAGCTCTGTTCTCTGGGTTTCATCATTAGGGTTTCTTTGATTTGCTAAAGAATTAGGTTTCATCAATGGCTTCCTCACCTCCTTCTAAACGCCGTCGTAAAAGCCTCACTATTGATGATGCTTTTGAGACCTTACTTGCCACTTCTTCCTCTGTTAATCGATTGTCCCCTGTCGTGGTTTTCGCTCACGGTGCTGGCGCCCCTTCTTCTTCTGAATGGATGATCAGATGGAAGGATATGTTAGGCAAGGCATTGCATGCCGTTGAAGTTGTCACTTTTGATTATCCATATATTTCTGGTGGAAGGAAATCTCCTCCCAAGGCAGAAAAATTGGTTCCACATCATGTAGAAATTGTCAAAAGGGCAACTGCAAAGTACCCTGGGCACCCTTTGGTTTTGGCGGGTAAATCAATGGGTTCGAGAGTAAGTTGCATGGTAGCTTGTGAGGAAGACATTCATCCTTCTGCAATTATTTGCTTGGGGTATCCCTTGAAGGGCTTGAAAGGGGATGTCCGAGATCAGACGCTGTTGCAAGTTACGGTTCCCATCATGTTTGTACAGGGTAGCAGGGATGCTCTGTGTCCTCTAGAGAAGCTGGAGGATATTCGGAAGAGGATGAAATCAATCAGTGGTTTACATGTTATTGATGGTGGTGACCATTCTTTTCAGATTTCAAAGAAATATCTTCAGGGCAAAGGTTCGAGTAAAGACGAAGCCGAAAGTCTTGCTGCTCAGGCCCTTGCAACTTTTGTTTCTGGGTTTCTTGGATGGCTTTAACTAAAGCCTTCTTTCCTTGTACAAATGTGTGTTTTAGAGGTTTAATTTGTAACATAAATGGTTGTAATGTCAGCTTATAAATTTTTCAACCAAAATTATGTACGCTAGTTTTAGTACTTCCCTTCTCTTTCTGTAGTTCTGGTCAAAAGGGAACTCATTTTCCTTTTTATTGTTTGTTGAATCCTTATATAAAATTTGAGATGCCTCTCATCTCATTTTATTTTCTCATG ATGGCTTCCTCACCTCCTTCTAAACGCCGTCGTAAAAGCCTCACTATTGATGATGCTTTTGAGACCTTACTTGCCACTTCTTCCTCTGTTAATCGATTGTCCCCTGTCGTGGTTTTCGCTCACGGTGCTGGCGCCCCTTCTTCTTCTGAATGGATGATCAGATGGAAGGATATGTTAGGCAAGGCATTGCATGCCGTTGAAGTTGTCACTTTTGATTATCCATATATTTCTGGTGGAAGGAAATCTCCTCCCAAGGCAGAAAAATTGGTTCCACATCATGTAGAAATTGTCAAAAGGGCAACTGCAAAGTACCCTGGGCACCCTTTGGTTTTGGCGGGTAAATCAATGGGTTCGAGAGTAAGTTGCATGGTAGCTTGTGAGGAAGACATTCATCCTTCTGCAATTATTTGCTTGGGGTATCCCTTGAAGGGCTTGAAAGGGGATGTCCGAGATCAGACGCTGTTGCAAGTTACGGTTCCCATCATGTTTGTACAGGGTAGCAGGGATGCTCTGTGTCCTCTAGAGAAGCTGGAGGATATTCGGAAGAGGATGAAATCAATCAGTGGTTTACATGTTATTGATGGTGGTGACCATTCTTTTCAGATTTCAAAGAAATATCTTCAGGGCAAAGGTTCGAGTAAAGACGAAGCCGAAAGTCTTGCTGCTCAGGCCCTTGCAACTTTTGTTTCTGGGTTTCTTGGATGGCTTTAA MASSPPSKRRRKSLTIDDAFETLLATSSSVNRLSPVVVFAHGAGAPSSSEWMIRWKDMLGKALHAVEVVTFDYPYISGGRKSPPKAEKLVPHHVEIVKRATAKYPGHPLVLAGKSMGSRVSCMVACEEDIHPSAIICLGYPLKGLKGDVRDQTLLQVTVPIMFVQGSRDALCPLEKLEDIRKRMKSISGLHVIDGGDHSFQISKKYLQGKGSSKDEAESLAAQALATFVSGFLGWL*
BLAST of Cucsa.303820 vs. Swiss-Prot
Match: KANL3_RAT (KAT8 regulatory NSL complex subunit 3 OS=Rattus norvegicus GN=Kansl3 PE=2 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.0e-13 Identity = 43/133 (32.33%), Postives = 76/133 (57.14%), Query Frame = 1
BLAST of Cucsa.303820 vs. Swiss-Prot
Match: TEX30_MOUSE (Testis-expressed sequence 30 protein OS=Mus musculus GN=Tex30 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 9.1e-10 Identity = 39/125 (31.20%), Postives = 67/125 (53.60%), Query Frame = 1
BLAST of Cucsa.303820 vs. Swiss-Prot
Match: TEX30_BOVIN (Testis-expressed sequence 30 protein OS=Bos taurus GN=TEX30 PE=2 SV=2) HSP 1 Score: 64.3 bits (155), Expect = 2.0e-09 Identity = 35/109 (32.11%), Postives = 59/109 (54.13%), Query Frame = 1
BLAST of Cucsa.303820 vs. Swiss-Prot
Match: TEX30_HUMAN (Testis-expressed sequence 30 protein OS=Homo sapiens GN=TEX30 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 7.7e-09 Identity = 34/111 (30.63%), Postives = 59/111 (53.15%), Query Frame = 1
BLAST of Cucsa.303820 vs. TrEMBL
Match: A0A0A0KQS0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G150440 PE=4 SV=1) HSP 1 Score: 472.6 bits (1215), Expect = 2.8e-130 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 1
BLAST of Cucsa.303820 vs. TrEMBL
Match: M5WAG3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010765mg PE=4 SV=1) HSP 1 Score: 352.4 bits (903), Expect = 4.2e-94 Identity = 175/235 (74.47%), Postives = 202/235 (85.96%), Query Frame = 1
BLAST of Cucsa.303820 vs. TrEMBL
Match: W9R2P7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003877 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 3.5e-93 Identity = 170/235 (72.34%), Postives = 202/235 (85.96%), Query Frame = 1
BLAST of Cucsa.303820 vs. TrEMBL
Match: V4TRS9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022095mg PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 8.4e-87 Identity = 165/232 (71.12%), Postives = 193/232 (83.19%), Query Frame = 1
BLAST of Cucsa.303820 vs. TrEMBL
Match: A0A067GCW7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027237mg PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 8.4e-87 Identity = 165/232 (71.12%), Postives = 193/232 (83.19%), Query Frame = 1
BLAST of Cucsa.303820 vs. TAIR10
Match: AT5G41850.1 (AT5G41850.1 alpha/beta-Hydrolases superfamily protein) HSP 1 Score: 270.4 bits (690), Expect = 1.1e-72 Identity = 128/199 (64.32%), Postives = 163/199 (81.91%), Query Frame = 1
BLAST of Cucsa.303820 vs. NCBI nr
Match: gi|449452249|ref|XP_004143872.1| (PREDICTED: KAT8 regulatory NSL complex subunit 3 [Cucumis sativus]) HSP 1 Score: 472.6 bits (1215), Expect = 4.0e-130 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 1
BLAST of Cucsa.303820 vs. NCBI nr
Match: gi|659074032|ref|XP_008437385.1| (PREDICTED: uncharacterized protein LOC103482816 [Cucumis melo]) HSP 1 Score: 458.8 bits (1179), Expect = 5.9e-126 Identity = 228/236 (96.61%), Postives = 232/236 (98.31%), Query Frame = 1
BLAST of Cucsa.303820 vs. NCBI nr
Match: gi|645267391|ref|XP_008239048.1| (PREDICTED: uncharacterized protein LOC103337658 [Prunus mume]) HSP 1 Score: 352.4 bits (903), Expect = 6.0e-94 Identity = 173/234 (73.93%), Postives = 203/234 (86.75%), Query Frame = 1
BLAST of Cucsa.303820 vs. NCBI nr
Match: gi|595848514|ref|XP_007209543.1| (hypothetical protein PRUPE_ppa010765mg [Prunus persica]) HSP 1 Score: 352.4 bits (903), Expect = 6.0e-94 Identity = 175/235 (74.47%), Postives = 202/235 (85.96%), Query Frame = 1
BLAST of Cucsa.303820 vs. NCBI nr
Match: gi|703100053|ref|XP_010096816.1| (hypothetical protein L484_003877 [Morus notabilis]) HSP 1 Score: 349.4 bits (895), Expect = 5.1e-93 Identity = 170/235 (72.34%), Postives = 202/235 (85.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|