Cucsa.303160 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTCGTTCTAAACTGTTAACCTTTTGGCCATTCTATCCTATGACACTGTGTGGGGCCATGAAGACTGAATATGAGAAGTTACCTGATGATTTTTGGATTCTTTGAGGATTCTAAACTCTAACCTGCCATCTGGATGAAACTTGAAGTTTGTAGGACATTGGGTTCTTCCTAAATGGTTTTCTTTTTTGACTTGATATATTGTTTAGTTTGTTCTTATATGCCAGTTCTTGTTTTTATATGTATGCAAATACTTGTAATCTGCAGAGGAAGTTAGCTACCCACTCTCTTGTCCCTGAACAGTGGAACTTGGTCCTATTGATAGGATATTACTCAGAACAAAGATGGCATGATGGTCACTGGGCAGTGGTTCTACCGTCCTGAAGAAGCTGAAAAAAAGGGGGGTGGAAGTTGGCAATCACATGATACTCGAGAGCTGTTTTATAGTTTCCACCGTGATCAGGTTCCTGCAGAATCTGTAATGCACAAATGTGTTGTGCATTTTGTTCCATTGCATAAGCAACTTCCAATTCGTAAGCAACATCCTGGATTCATTGTGCGAAAAGTGTATGACACAGTCGAAAGAAAACTTTGGAAACTAACTGATAAGGATTATGAAGATTCAAAGCAGCAGGAAATTGATGAGCTTGTCAAGAAGACTATGGCACGGTTGGGTGATCTCCCCGATATTGAGCCTGAAGATGCCCCAGCTGATCAAGAAGACCAGTTGAAAACTAAAAGGAGTTTCAAAAGAAAAAaTATTTCTCCTCTTGATGTCACAAGAGATGAATCAGAGACAACCAGATCTGATCTCAGCTCAAAAGCTGAAACACCAGGAAGCTGTACAACAAACCGATCAGAGTACTACTCCATTTTAGAAATATTTGAAGTTCTAACAGGTGAAACTCATAGAGATAGATGGTTGGAAAAaCTTTTGGAGGGGGTTCAGTACATATGTCATTCTCCTGAAAAGACGCATGAAGGTGATATAGGAAAAACTGCTGCTAATGGTGTGAACCTTGAAAATAAAAATCCAGAATTATCAATTGCGGCAGAGAAGAATGCTAAGGTATGCTGATTAGTTACTGTTATTGTGTATCTTTTGTGAACATATTATCAGTGAACGTTCTATACTTTTTCCAACTTTTCTATTTGTGGTTTTGCAGAGCAGCAAGTCTTTTATCTGGCCGGATGCAGCTGTTCCGGCAATAACTGCTCTTGAGAAGGTGTCCAATGATGCTTTGTCTGCTGATTTCCAGAAGTATAACCAAAAAaTGCGGCAATTGGTGTTCAATCTCAAGGTTTGAAGTCTATCTGTTCTTTTGTGTCAATGCATACTCATCAATTGATTATTTCATTCTCTTGGCAGAATACTCGTTTACTAGCTCAACGGCTGTTAAATGGAGAGTTGGAACCGTCAAAAATCCTGAATATGTCACCCAATGAGCTCAAGGTACTACGATGATCATATCCCTTCTCTTGTTTTAACTTTAACGCCTAGAATCATGTTAACTTGTACAACTCACAACATCTAACATATCAGTTAGCTCAATTGATGAGCTAGATGGCTATATTTCTTGCCTCTTAACCACCTGGTGGATTTTTTGGAATGAAATTTGAATATCATATGGAGCGTAGAAATGGATAGTAAAACAAGAAATCACTGTGACGTCCTTTTACTTATGGAAAATATACTCTATCTGTTCAATTTTGTGTGATCTGTTGTTTAAACATGCTGTTTTTTTCCATTATGAGCTTTCTGGGTAAAACTCTTATTTTTTtGCTAAGTTCAAATAATACAGGTTTGATCATGTTGGGACTTTGGAATTTCCATTCTTGCCTTTAAATTGAATTTAAGCTGTTGGAAATCACTAAAATTTCTGTCTCATAGTAGGTGTAGGCTATTGTGATATTCACAATAACAGATGAAGTTCAAAAAGAGCTGGTATGCTTATTGTCTGTTTGTTGTTAAAGATAGATTAACTATCGTGGCCTAAGATTGATTCAGAATTTCTCCATCCTCCCTGCTATCAAATGGGGAAAAAGGGAGGAAAGAAGATAAGACCATACTTGAAACCTATGGCAAAACTAGCCTAAAGCAACTTCAGTTAATTATTAATGTTTGGGAAAATTTCATGATCTCCTATAAACTAACTTGTAATTTACATTAAAAGTAACCAGTCACGAATTTCTCCTGATTTTTTTTTtCATATTTTTTTGCTTTTTTGACTAAATTTTATTTATGTTTTGAAATGGAAAGGGTTGCTTAGCCACGAGGCTTTGTTTTGGTAAGAAACTGAGTTTCTAAGGCTATTTCCATACGTTGAATGAGATGTATCACTCCCTTTTAAGGATTAGAGAGGAGCCCTGTGGTACACAACCTCTTTTGCTAACTCATGACACGTTTGGTAAGAAAGAAATAGAAATAGAAGAGTATTTATAGAGGTCAATGGTCCTTGGAGAGGTGTGAACTCTATGGCTAGGTTCAATATCTATCCTGGGTGCCTGTGATTAGAGAGTTTTATCACCCGTCTTTTCTGTCTTGTCCTCAATTCGACTCTTTTCTCTATTTCTTTTTCCTTGATTTTTGAGTATAAGAAATTTTCATTTGAGTGTAGTTTAATTTTTTtAAAAAaTAAGTTAATAACATAACACGGAGGGTATCAATAATCTAAGGCTGTATTTGATAACTAGCTGTTTTTTGGTTATTACAAAATAAGCTTATTAATAATTACTTCCATCCATAGGTTCATATGCTTTATTATCCATTTTCTACTAATATTTTCAAAACCCAAGCTAAGTTTTTAGAACTATTAAAAGTTGTTTTCATTTTTTATGATTATAGAATTGGACTAGGAATTTATGTGTTTCTTTTAGATAGGTGAAAACCGTAATAGGAAAATGAGGAGAAAATACATAAATTTCACAAATAGAAAACTAAAAAaTGAATTTGTTATCAAACGGTCTTAAAATACCAGAGTAAAAAAAaaCAAATCTATCATAAAAaTGTGAGAAAGCGAATCAATAGGAAAACAGTGGAGGGAGAAATAGGTAGATACAAAAAGATAACAGTTGTGTGCCTTCTTAAAAAAaGGAACAAAAaCATGTATATCACTTTTGGATGGACATGTACCCCATGAAGTAAACAAGCACGGGATTACCATAATTATAAAAAGGGTTGCTGTTATCATTTGGAATGGAATAGCGATGACCATGTTTTCCAGATTCAAAATTTTATACAAACTAGGGTGCTTTCTCCATTCCGTGTCATTTTCATGTGTATCATTTTAGAGTCTATTCTCCCTTCAGATTTATAATTTGATAGCTTTTGTTTGCCTTGATCTTCTAACCTTTTAGAAACATTAGTACATGTTCATCTGCCTATGGGCAGGAGCTGCATAACTCTTTATTATTATTATTACTTTTAAGTGTGTGTGTGGACGTACATATATTTTCAAACCAAGACAGTAGAAGTTACTGTAATTGTTCATGACAGGATGGACTAACCGCTGAGGAGTCGGCAGCAACTAAAGAGCCTGATGAGTCTGAGCGTATGCAGGTCTGCTTATTTCTTCCATTTCTCCCTTCTCATTTCATTTAACCATTTTATTTGCACCTAACTTAATAAATGACCATATAATATGAAACAGATGACAGATGCTCGGTGTTCAAGATGCACAGAACGTAAAGTGGGTGTCAGGGACATCATCCAAACAGGACATGGACAACGATATAAGGTCCCATtCTTTCTTTCTCGAATTTTGCTTTGCCTTAGACCGGTCAAAATCAACCTGACATATGGCATTATCTCTGAGATGTGTTGAGTTTGAGAACTAGTGCTTCTATATAGCTGAAATATATACTTGTGTATATTGTTTGTTTTtTtAAGAAATTTATTTATTTCAATTCAATGATTATGTGAAGGTCAGGTGAGACCAAATCTTCAATTTTAGGGAAGGTATAAATGCGTCTACCACTTATACTCGTCAACAATTGCAATGGATGGTACCAATTGTAGTATAAGATCTAGACAGTGTATTTTGTCCTCCAATATGCTATGCTTTTGTAGTTTTGTAGTCTAAGAAGCACATATGCTCTAGTTTGGCAAGCATGTTCGTGTCTGAACATGTTGGACATGTATTAGACACTTTTAGTGCAACAAATGTGTTAGATACACAGAGTTGAGTAGTCTAAAAAGACACATTTATGTCGATAATAGTTTATAAGGATGAAATACATCAAGCTTAATTTTTTAACATATAAATGAACGTGTGTCAATCCACTTACTTTGAATTTAAAAACATATACTTTAATAAAAGTATACTTGCTGTATCATTCTCTAGATTTTTAAAATATGATGCTTCGCTGTATTCGTGTTATGTTGTATTTGTATCTCAAATCCATATGTGTGCTTCTTAGTCTGTAGGTTTGTAGTTTGTTTTAGAAAAATGAAACAGCTGGAAACACCTGTGGATAAAAATATACGATGCTAACATATCCCAGTTTTACAATGCCAGTTGGAGTGCATTGCCTGTGGTCATTCTTGGTATGCCTCCAGGGATGAGTTATCCATGCTGACAATAGATACAACTAATTCTACTAAGAATGTTGGAACCGCACCTTGGGCAACTGCTAAATTTGAAGATGTGGAGAAGAGTCTACTCAGTCCTCGTGAACCCGAAAAAGCCGCCGAGGAACTCTTCAAGAAGACGAGTGAAGCGTACATGCCAGTAGTGGATAGCCAGAAATCTAACAAGTCTAAAAAGGAAGATAATTCAGAACCTGCTAAAAATGCATAG TTCGTTCTAAACTGTTAACCTTTTGGCCATTCTATCCTATGACACTGTGTGGGGCCATGAAGACTGAATATGAGAAGTTACCTGATGATTTTTGGATTCTTTGAGGATTCTAAACTCTAACCTGCCATCTGGATGAAACTTGAAGTTTGTAGGACATTGGGTTCTTCCTAAATGGTTTTCTTTTTTGACTTGATATATTGTTTAGTTTGTTCTTATATGCCAGTTCTTGTTTTTATATGTATGCAAATACTTGTAATCTGCAGAGGAAGTTAGCTACCCACTCTCTTGTCCCTGAACAGTGGAACTTGGTCCTATTGATAGGATATTACTCAGAACAAAGATGGCATGATGGTCACTGGGCAGTGGTTCTACCGTCCTGAAGAAGCTGAAAAAAAGGGGGGTGGAAGTTGGCAATCACATGATACTCGAGAGCTGTTTTATAGTTTCCACCGTGATCAGGTTCCTGCAGAATCTGTAATGCACAAATGTGTTGTGCATTTTGTTCCATTGCATAAGCAACTTCCAATTCGTAAGCAACATCCTGGATTCATTGTGCGAAAAGTGTATGACACAGTCGAAAGAAAACTTTGGAAACTAACTGATAAGGATTATGAAGATTCAAAGCAGCAGGAAATTGATGAGCTTGTCAAGAAGACTATGGCACGGTTGGGTGATCTCCCCGATATTGAGCCTGAAGATGCCCCAGCTGATCAAGAAGACCAGTTGAAAACTAAAAGGAGTTTCAAAAGAAAAAATATTTCTCCTCTTGATGTCACAAGAGATGAATCAGAGACAACCAGATCTGATCTCAGCTCAAAAGCTGAAACACCAGGAAGCTGTACAACAAACCGATCAGAGTACTACTCCATTTTAGAAATATTTGAAGTTCTAACAGGTGAAACTCATAGAGATAGATGGTTGGAAAAACTTTTGGAGGGGGTTCAGTACATATGTCATTCTCCTGAAAAGACGCATGAAGGTGATATAGGAAAAACTGCTGCTAATGGTGTGAACCTTGAAAATAAAAATCCAGAATTATCAATTGCGGCAGAGAAGAATGCTAAGAGCAGCAAGTCTTTTATCTGGCCGGATGCAGCTGTTCCGGCAATAACTGCTCTTGAGAAGGTGTCCAATGATGCTTTGTCTGCTGATTTCCAGAAGTATAACCAAAAAATGCGGCAATTGGTGTTCAATCTCAAGAATACTCGTTTACTAGCTCAACGGCTGTTAAATGGAGAGTTGGAACCGTCAAAAATCCTGAATATGTCACCCAATGAGCTCAAGGATGGACTAACCGCTGAGGAGTCGGCAGCAACTAAAGAGCCTGATGAGTCTGAGCGTATGCAGATGACAGATGCTCGGTGTTCAAGATGCACAGAACGTAAAGTGGGTGTCAGGGACATCATCCAAACAGGACATGGACAACGATATAAGTTGGAGTGCATTGCCTGTGGTCATTCTTGGTATGCCTCCAGGGATGAGTTATCCATGCTGACAATAGATACAACTAATTCTACTAAGAATGTTGGAACCGCACCTTGGGCAACTGCTAAATTTGAAGATGTGGAGAAGAGTCTACTCAGTCCTCGTGAACCCGAAAAAGCCGCCGAGGAACTCTTCAAGAAGACGAGTGAAGCGTACATGCCAGTAGTGGATAGCCAGAAATCTAACAAGTCTAAAAAGGAAGATAATTCAGAACCTGCTAAAAATGCATAG ATGATGGTCACTGGGCAGTGGTTCTACCGTCCTGAAGAAGCTGAAAAAAAGGGGGGTGGAAGTTGGCAATCACATGATACTCGAGAGCTGTTTTATAGTTTCCACCGTGATCAGGTTCCTGCAGAATCTGTAATGCACAAATGTGTTGTGCATTTTGTTCCATTGCATAAGCAACTTCCAATTCGTAAGCAACATCCTGGATTCATTGTGCGAAAAGTGTATGACACAGTCGAAAGAAAACTTTGGAAACTAACTGATAAGGATTATGAAGATTCAAAGCAGCAGGAAATTGATGAGCTTGTCAAGAAGACTATGGCACGGTTGGGTGATCTCCCCGATATTGAGCCTGAAGATGCCCCAGCTGATCAAGAAGACCAGTTGAAAACTAAAAGGAGTTTCAAAAGAAAAAaTATTTCTCCTCTTGATGTCACAAGAGATGAATCAGAGACAACCAGATCTGATCTCAGCTCAAAAGCTGAAACACCAGGAAGCTGTACAACAAACCGATCAGAGTACTACTCCATTTTAGAAATATTTGAAGTTCTAACAGGTGAAACTCATAGAGATAGATGGTTGGAAAAaCTTTTGGAGGGGGTTCAGTACATATGTCATTCTCCTGAAAAGACGCATGAAGGTGATATAGGAAAAACTGCTGCTAATGGTGTGAACCTTGAAAATAAAAATCCAGAATTATCAATTGCGGCAGAGAAGAATGCTAAGAGCAGCAAGTCTTTTATCTGGCCGGATGCAGCTGTTCCGGCAATAACTGCTCTTGAGAAGGTGTCCAATGATGCTTTGTCTGCTGATTTCCAGAAGTATAACCAAAAAaTGCGGCAATTGGTGTTCAATCTCAAGAATACTCGTTTACTAGCTCAACGGCTGTTAAATGGAGAGTTGGAACCGTCAAAAATCCTGAATATGTCACCCAATGAGCTCAAGGATGGACTAACCGCTGAGGAGTCGGCAGCAACTAAAGAGCCTGATGAGTCTGAGCGTATGCAGATGACAGATGCTCGGTGTTCAAGATGCACAGAACGTAAAGTGGGTGTCAGGGACATCATCCAAACAGGACATGGACAACGATATAAGTTGGAGTGCATTGCCTGTGGTCATTCTTGGTATGCCTCCAGGGATGAGTTATCCATGCTGACAATAGATACAACTAATTCTACTAAGAATGTTGGAACCGCACCTTGGGCAACTGCTAAATTTGAAGATGTGGAGAAGAGTCTACTCAGTCCTCGTGAACCCGAAAAAGCCGCCGAGGAACTCTTCAAGAAGACGAGTGAAGCGTACATGCCAGTAGTGGATAGCCAGAAATCTAACAAGTCTAAAAAGGAAGATAATTCAGAACCTGCTAAAAATGCATAG MMVTGQWFYRPEEAEKKGGGSWQSHDTRELFYSFHRDQVPAESVMHKCVVHFVPLHKQLPIRKQHPGFIVRKVYDTVERKLWKLTDKDYEDSKQQEIDELVKKTMARLGDLPDIEPEDAPADQEDQLKTKRSFKRKNISPLDVTRDESETTRSDLSSKAETPGSCTTNRSEYYSILEIFEVLTGETHRDRWLEKLLEGVQYICHSPEKTHEGDIGKTAANGVNLENKNPELSIAAEKNAKSSKSFIWPDAAVPAITALEKVSNDALSADFQKYNQKMRQLVFNLKNTRLLAQRLLNGELEPSKILNMSPNELKDGLTAEESAATKEPDESERMQMTDARCSRCTERKVGVRDIIQTGHGQRYKLECIACGHSWYASRDELSMLTIDTTNSTKNVGTAPWATAKFEDVEKSLLSPREPEKAAEELFKKTSEAYMPVVDSQKSNKSKKEDNSEPAKNA*
BLAST of Cucsa.303160 vs. TrEMBL
Match: A0A0A0KKJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G153130 PE=4 SV=1) HSP 1 Score: 922.5 bits (2383), Expect = 1.9e-265 Identity = 456/456 (100.00%), Postives = 456/456 (100.00%), Query Frame = 1
BLAST of Cucsa.303160 vs. TrEMBL
Match: W9QPM3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024279 PE=4 SV=1) HSP 1 Score: 664.8 bits (1714), Expect = 7.3e-188 Identity = 338/481 (70.27%), Postives = 398/481 (82.74%), Query Frame = 1
BLAST of Cucsa.303160 vs. TrEMBL
Match: A0A067GC70_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006806mg PE=4 SV=1) HSP 1 Score: 664.1 bits (1712), Expect = 1.2e-187 Identity = 332/462 (71.86%), Postives = 386/462 (83.55%), Query Frame = 1
BLAST of Cucsa.303160 vs. TrEMBL
Match: V4TSB5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019291mg PE=4 SV=1) HSP 1 Score: 663.7 bits (1711), Expect = 1.6e-187 Identity = 332/462 (71.86%), Postives = 386/462 (83.55%), Query Frame = 1
BLAST of Cucsa.303160 vs. TrEMBL
Match: B9GKH8_POPTR (Bromo-adjacent homology (BAH) domain-containing family protein OS=Populus trichocarpa GN=POPTR_0001s09380g PE=4 SV=1) HSP 1 Score: 652.1 bits (1681), Expect = 4.9e-184 Identity = 329/456 (72.15%), Postives = 388/456 (85.09%), Query Frame = 1
BLAST of Cucsa.303160 vs. TAIR10
Match: AT4G11560.1 (AT4G11560.1 bromo-adjacent homology (BAH) domain-containing protein) HSP 1 Score: 532.7 bits (1371), Expect = 2.2e-151 Identity = 276/454 (60.79%), Postives = 333/454 (73.35%), Query Frame = 1
BLAST of Cucsa.303160 vs. TAIR10
Match: AT2G25120.1 (AT2G25120.1 Bromo-adjacent homology (BAH) domain-containing protein) HSP 1 Score: 193.4 bits (490), Expect = 3.2e-49 Identity = 115/279 (41.22%), Postives = 155/279 (55.56%), Query Frame = 1
BLAST of Cucsa.303160 vs. TAIR10
Match: AT4G23120.1 (AT4G23120.1 Bromo-adjacent homology (BAH) domain-containing protein) HSP 1 Score: 170.6 bits (431), Expect = 2.2e-42 Identity = 104/280 (37.14%), Postives = 147/280 (52.50%), Query Frame = 1
BLAST of Cucsa.303160 vs. TAIR10
Match: AT3G43990.1 (AT3G43990.1 Bromo-adjacent homology (BAH) domain-containing protein) HSP 1 Score: 125.6 bits (314), Expect = 8.1e-29 Identity = 70/177 (39.55%), Postives = 110/177 (62.15%), Query Frame = 1
HSP 2 Score: 57.4 bits (137), Expect = 2.7e-08 Identity = 31/75 (41.33%), Postives = 47/75 (62.67%), Query Frame = 1
BLAST of Cucsa.303160 vs. TAIR10
Match: AT3G48050.1 (AT3G48050.1 BAH domain ;TFIIS helical bundle-like domain) HSP 1 Score: 94.4 bits (233), Expect = 2.0e-19 Identity = 57/166 (34.34%), Postives = 83/166 (50.00%), Query Frame = 1
BLAST of Cucsa.303160 vs. NCBI nr
Match: gi|449452318|ref|XP_004143906.1| (PREDICTED: uncharacterized protein LOC101218620 [Cucumis sativus]) HSP 1 Score: 922.5 bits (2383), Expect = 2.8e-265 Identity = 456/456 (100.00%), Postives = 456/456 (100.00%), Query Frame = 1
BLAST of Cucsa.303160 vs. NCBI nr
Match: gi|659073825|ref|XP_008437274.1| (PREDICTED: uncharacterized protein LOC103482748 [Cucumis melo]) HSP 1 Score: 917.1 bits (2369), Expect = 1.2e-263 Identity = 453/456 (99.34%), Postives = 455/456 (99.78%), Query Frame = 1
BLAST of Cucsa.303160 vs. NCBI nr
Match: gi|985446164|ref|XP_006476575.2| (PREDICTED: uncharacterized protein LOC102610276 [Citrus sinensis]) HSP 1 Score: 664.8 bits (1714), Expect = 1.1e-187 Identity = 332/462 (71.86%), Postives = 387/462 (83.77%), Query Frame = 1
BLAST of Cucsa.303160 vs. NCBI nr
Match: gi|703071739|ref|XP_010089105.1| (hypothetical protein L484_024279 [Morus notabilis]) HSP 1 Score: 664.8 bits (1714), Expect = 1.1e-187 Identity = 338/481 (70.27%), Postives = 398/481 (82.74%), Query Frame = 1
BLAST of Cucsa.303160 vs. NCBI nr
Match: gi|641857470|gb|KDO76215.1| (hypothetical protein CISIN_1g006806mg [Citrus sinensis]) HSP 1 Score: 664.1 bits (1712), Expect = 1.8e-187 Identity = 332/462 (71.86%), Postives = 386/462 (83.55%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |