Cucsa.300640 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.GCCCCCTCCTTTCTCTTCTTCTTCTTCTTGTTCCATTCCTTTTCTGCAAAACTGGAGAGGCACCACCCTTCTTCCTCCGCACCGTCGTGGCCTTCCGACGACCGACGACCCAATTTCAATCACCAGTTTGATCCCTATGTTCAATACCCCAATCACCATCCCGGGCCCCCTTTTGTCCACCCCAATTATCCCCCTCAGTACGCTCCCCATCCCCCCCACCCTCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCTACGCAGCACCCGCCTCCTTTCCAGCCTCAGCACCACCCCCAGCCCCAGCCCCCGCCCCCGCCCCCGCCACCTCACCAGCACCCCTACCAGCATCAGCATCAGCACCAGCACCAGCACAATAACTGGAACCATCCGGAGTTCCACAATCATCCCCCGGACTACCGTCCCCAGCCGCACTTTAACGGCGAGATGACTGAGGGGTTCGGAAACGGGGGTTTGAGGCCCAATTGTGGGAATCCAAATCCAATTTTAGGGCGTAAAAGGCCTAGAAACTATTCCAACAGAACTGTTCCTGGAGGTATTTCATTTTTTTAA gccccctcctttctcttcttcttcttcttgttccattccttttcTCACCCGCCTCCTTTccagcctcagcaccacccccagccccagcccccgcccccgcccccgccACCTCACCAGCACCCCTACCAGCATCAGCATCAGCACCAGCACCAGCACAATAACTGGAACCATCCGGAGTTCCACAATCATCCCCCGGACTACCGTCCCCAGCCGCACTTTAACGGCGAGATGACTGAGGGGTTCGGAAACGGGGGTTTGAGGCCCAATTGTGGGAATCCAAATCCAATTTTAGGGCGTAAAAGGCCTAGAAACTATTCCAACAGAACTGTTCCTGGAGGTATTTCATTTTTTTAA GCCCCCTCCTTTCTCTTCTTCTTCTTCTTGTTCCATTCCTTTTCTCACCCGCCTCCTTTCCAGCCTCAGCACCACCCCCAGCCCCAGCCCCCGCCCCCGCCCCCGCCACCTCACCAGCACCCCTACCAGCATCAGCATCAGCACCAGCACCAGCACAATAACTGGAACCATCCGGAGTTCCACAATCATCCCCCGGACTACCGTCCCCAGCCGCACTTTAACGGCGAGATGACTGAGGGGTTCGGAAACGGGGGTTTGAGGCCCAATTGTGGGAATCCAAATCCAATTTTAGGGCGTAAAAGGCCTAGAAACTATTCCAACAGAACTGTTCCTGGAGGTATTTCATTTTTTTAA APSFLFFFFLFHSFSHPPPFQPQHHPQPQPPPPPPPPHQHPYQHQHQHQHQHNNWNHPEFHNHPPDYRPQPHFNGEMTEGFGNGGLRPNCGNPNPILGRKRPRNYSNRTVPGGISFF*
BLAST of Cucsa.300640 vs. Swiss-Prot
Match: RBM33_HUMAN (RNA-binding protein 33 OS=Homo sapiens GN=RBM33 PE=1 SV=3) HSP 1 Score: 65.5 bits (158), Expect = 4.6e-10 Identity = 39/102 (38.24%), Postives = 44/102 (43.14%), Query Frame = 1
BLAST of Cucsa.300640 vs. Swiss-Prot
Match: Y4007_DICDI (Putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007 OS=Dictyostelium discoideum GN=DDB_G0272797 PE=3 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.9e-08 Identity = 28/54 (51.85%), Postives = 32/54 (59.26%), Query Frame = 1
BLAST of Cucsa.300640 vs. TrEMBL
Match: A0A0A0LBT6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G536140 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.8e-13 Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1
BLAST of Cucsa.300640 vs. TrEMBL
Match: W9IYP7_FUSOX (Uncharacterized protein OS=Fusarium oxysporum FOSC 3-a GN=FOYG_02915 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 8.4e-11 Identity = 38/77 (49.35%), Postives = 45/77 (58.44%), Query Frame = 1
BLAST of Cucsa.300640 vs. TrEMBL
Match: G1TY18_RABIT (Uncharacterized protein OS=Oryctolagus cuniculus GN=RBM33 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 7.1e-10 Identity = 42/107 (39.25%), Postives = 49/107 (45.79%), Query Frame = 1
BLAST of Cucsa.300640 vs. TrEMBL
Match: G1TY18_RABIT (Uncharacterized protein OS=Oryctolagus cuniculus GN=RBM33 PE=4 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 2.9e-03 Identity = 36/115 (31.30%), Postives = 40/115 (34.78%), Query Frame = 1
HSP 2 Score: 68.9 bits (167), Expect = 4.6e-09 Identity = 30/53 (56.60%), Postives = 34/53 (64.15%), Query Frame = 1
BLAST of Cucsa.300640 vs. TrEMBL
Match: A0A151GTB6_9HYPO (Uncharacterized protein OS=Drechmeria coniospora GN=DCS_01503 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.0e-08 Identity = 35/93 (37.63%), Postives = 47/93 (50.54%), Query Frame = 1
BLAST of Cucsa.300640 vs. NCBI nr
Match: gi|778681545|ref|XP_011651537.1| (PREDICTED: flowering time control protein FCA [Cucumis sativus]) HSP 1 Score: 83.6 bits (205), Expect = 2.6e-13 Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1
BLAST of Cucsa.300640 vs. NCBI nr
Match: gi|700202999|gb|KGN58132.1| (hypothetical protein Csa_3G536140 [Cucumis sativus]) HSP 1 Score: 83.6 bits (205), Expect = 2.6e-13 Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 1
BLAST of Cucsa.300640 vs. NCBI nr
Match: gi|594621682|ref|XP_007165522.1| (PREDICTED: RNA-binding protein 33 [Balaenoptera acutorostrata scammoni]) HSP 1 Score: 80.9 bits (198), Expect = 1.7e-12 Identity = 47/113 (41.59%), Postives = 54/113 (47.79%), Query Frame = 1
BLAST of Cucsa.300640 vs. NCBI nr
Match: gi|594621682|ref|XP_007165522.1| (PREDICTED: RNA-binding protein 33 [Balaenoptera acutorostrata scammoni]) HSP 1 Score: 45.1 bits (105), Expect = 1.0e-01 Identity = 37/116 (31.90%), Postives = 41/116 (35.34%), Query Frame = 1
HSP 2 Score: 77.8 bits (190), Expect = 1.4e-11 Identity = 34/36 (94.44%), Postives = 34/36 (94.44%), Query Frame = 1
BLAST of Cucsa.300640 vs. NCBI nr
Match: gi|659093311|ref|XP_008447477.1| (PREDICTED: flowering time control protein FCA isoform X2 [Cucumis melo]) HSP 1 Score: 77.8 bits (190), Expect = 1.4e-11 Identity = 34/36 (94.44%), Postives = 34/36 (94.44%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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