Cucsa.300560 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.300560
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionCytochrome C oxidase subunit 5b
Locationscaffold02931 : 76081 .. 82912 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTtCTTTtCTCCCATTTCCAAAAGAATAGAAGCTGGTGAAGGGCGAGAGAGTGAAGAGCAAACGAGAGCCAAATTCGCCGTTCAAGAGCTGCGACCTGAGATCATACCCCGAAAGTTCACAGATTTCAATCTACCATGTGGAGAAGATTGCTCTCTTCGTCTCTCAAATCCTTAAAATCACTTCCCTCATCATCTACGCCTGCATCCGCTCCCTTGGGATGCATTTCCCAAGCCCCTCGACTCGCTGCTGCTTCTCATCTTTCTCCTTCCTCGACTCTCCCGCTTTTCGCTCGCCATTACGCCTCTGATTCTGGTAGATCTTGCACTTTTCTTCGGATTTTATACTCTCTCCATATATATGTGGAATTAATTGGTCGTCTCATTATTAATCGATTACTATCGTACAGTCGTGTCGATCTATAGTATGAGCAGGAATGCTGTTTTTATTTtCTGTGGTTGTTAATTGACTTTTTACTGTAGCTGATACTGGTCTGAAGAAGACGGTTGAGGATGTTATGCCAATCGCGACCGGACACGAGCGTGAAGAGCTTGAAGCTTCGCTTGAGGTGAAATTTCTTGTATTTTCTTGCTTACCTGGATCTCTTTCCGCTGCGTGTTGTTTTTTCCACGCTTCATTTCACGTTGTGAAATGTACTGGATTAAGGAGTAGTTTAAAATTTATGAATTCATTTTGATTGTCAAACTGAGCCTGGTATGGTAATTTTCAGTTTCGGAAAGCCAGGTTAAATTTTTTTTGCTTTCATTGGTTGGTTCATTTTAATTTTCCAACTGTGCGGTTTATGTTCATATTTTTTATAAGCTGGCTTCTGAAGGATGTATTTTTAGTATTGGATGCAAGTCTCATTTTAGTTGGTTTAACGTTTGCAGGGAAAAGACATTCTTGACATAAACCATCCTATTGGCCCTTTTGGAACTAAGGTTGGTGTAGTTGCTTGTTTTGTCATTGCTAGAATTAATTTCGATGCTTTAGCTTTTATTCAAAGTTTCATTCCATGTAGATTTCAAGGCATGGCAAGAGCAATATTTATTGAGTTTACTGCTTTCACTTGAATTTAAGCTGCAGCTTTGTTGTGCTTCATTGAGATCTCAGACACTCGAAATATTTGCAAACTGATTGTTCTGAATTTTGGTTTGCAGTTTTTTtCCCTTCCATCTCCTGAATATCCATACCATTTTtCTTTCATGCTCTGTTGCACATCGTAACTTAGTAAACAACAAGAAAATTCAAAGTGAATGAGTTTGTGGATTTATATGCTTAAAAAATTAGTTAGATGTATTTCATTCCCAAATTTTTTtATTTTTGTTAGATGTATTTCATTCTCAATATTGTTTACTTTTTCCATATACGTGCCTCCTTGGTATATGTAACGAGTGTTTGATGCATGTCTAACAAATGTTGGTCCTGTGTTGAGTTTGTACAACTAGACACATCTATTTTACTTTTAAGTGTCCTATGTTGAGTTTGTACTAGTCAAAAGAGTGTCTGAGTGTCTTAAGTGTCCGATACATGTTTGAGGCGGACACACCAGCCAAACTTAAGTGTCCATGCTCCTTAGCATTTAGAAACAAGAAACTATGCGAGTTCTAATATTGGTCTCACTCCTAGCACTCCCTCGTAGGTTTTTGTTGTTCTTCTAGAGTCTCTCACCTAAATCAAGTCTAGAGATAAGGTCATTCAAAGAATCTTAGGCTTCCTTTTAAAGAAATAACCGACAATCTTATGCTCTTCTTCTAAAGCCTAATCTTGTATATCCTTTTCAACAATTTTAGTCTTCTCTGGTTTAAAAATTTTGCAGTCTTGAAGAGTTAAATGTTTGTGATTGGCTGTAAAAACTGTCTCTTTTGCTTCCATTCTTTGAAGTCTGAACTCCAAAGTGTTGATTATTTATTACAAAGCATATGAACTGGTGAATATACTTCTCAATGTTGTGATCTTTTCATAGTTTTTGTGCCAATGCCTCTTCACTTCGATGTTTTTTtGGGTACTTCAACAGATGCATTCTCTCTGTAGTTTGGATACCATTGGTATTTGGTAGATTAACTAATCAGTGACAGACTGCCGTTTGGTTTTAGATGTATGAGTTTCAACTCTTTGTAACAGCCATTATGGGTTGGTCTACTGGTAAAAGAGGAGACATAGTCTCAATAATTATCTAAGAAGTCATAGGTTTAATCAATGGTGACTACTTGCTTAGGAATTAATTTTCTATGAGTTTCTTTAACACCCAAATGTTGTAGGGTCGGGTGGGTTGTTCTTTGAGATTAGTCGAGGTATGTGTAAGTAGGCCCAAACTCTCACGAATATATAAAAAAAAGTTTGAACTCTTTGTTGCACAATTTGGTTAGAAACTTTTTACCTCATTTTGGAAGATAATTTTTTAGATTGGAAAGTTGTTTGCGGAAATAATCTTATTATATCTTGCTGGTCTGGAAATGTAGCAAGGATACATCGATTGAGACCACGGATGTCGAACCTTGGCTTTGTCATTTGGCTGGAAGCTTTGTCCTTAGTCTTTCAAAGTTGGAATATAGGTTGCATGAAGTAAGGTTCTCCTAATCTTTTACCAACCAACATTGGAAGAAGAGAATCCATAACATTACAAGGGCAAACAAAACTAAAGTTTGAAACTTTTGAAATTTTTGCCTAGCCTTAGAGATATGGGAGTTCAAGAAGAGATGTGTAGTGGATTCTTtATTttttttGGGAAAGAATGGCTATGTTGGATACAAATAAGAGGTGATCCTTCTTGAGCATAATCATATTGAATTAAACCCTTTGAAGAAAGCAGACTAAAGAAACACCTTGTACTTTCTAGGAACCTTTGGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCCCCTGAAACCACAAATATAATAAACATAGCAAACTGAAAaGGCACTAGAAGTGGAATTTCAAACTCTCAAAATCCTGGTTTTAAGGAAACTGAAGACAAACGTGATAATAAGGTTCACCCTCTCTTCGATTTCTCTGGTGCTGTGCTACTTTCTGTTATTTTTGAAATGCAACTTTGATGGTGATTAGCCTTATCCCACAAGTCTGGAACCAGAGTTTTTTTGAGCTGGTATCCTAATACAATCACAAGCTAACATCATCACTGAAGGTTGTTTATGTTATAAGTTATTCTACCATATACTTCACCAAAATCTGACTGATGCACCATTTCCAATTGGATCAACATAATTGTAATAGATTCACTCAAGAACAAGCATATCAATAAGACCTTGAGTTTTTATTGGAAAAATAGGAACGTCTCATTATAAATTTGGGTCACTGCGTATCTGCTAGCAATCACTATATGCCAAAGAGAACATATTCCCTGGGAGATCTCCATAACCACTTGCGAAGAAGACTAATGTTTTTGAGTTTGATGCTATGATTGAACCTTCTTTCATAAGAGAAAGAATAACCAGAGACCACATCAACCAAACAAGTGATTACTCCTTTGCCATTTGAACCTTATCAAAAGAAATTCTTAATATGTCGTTCTCTGAAATTCCACCTCTTCAAAGGGAATGCTAAAGACTGAaaGAAAGTATCAGGAAGATTGGTGAAGATTTGCTCTAAAATTCATGTCTCATTGTCTCTCCTCACACACACAACATTTTTtCAAATAATATAATTAGTCTTCTGTCAAAAAAAAAAAAaaTCATGAGTATAGAGGCCATTGTTGAATATATTATTAACATCAGTGAATGTTGAAGATGAAAACACTACAGCACATTTTCTTTGCAGAATTACCATGAAACGGGAGATTGGATGAAGTGTCATTCAATTAGGTCAATCTACGTCCTATGGAAAGGAAATTGTGCTCTTCTCATTTTTTAATTTGTCTAGAATAGGCTGCCAAAATACTTTGAGAAGATAGTTTTCGATATAAAGGGATCCCCAAGTAACCATTAGGCCATTCACCCACCTTACACCCCTGTTTGTTTGGAGCAGAGTCCTCCCGAAAAGTTGCAGGAGATACCCAAAAACTTAGGTTTTTGGCTGTTTGTTTTAAGATCAGAGCCTCCTTCAAATCGCCCAATTAAGGGAAAGAGATTACTAAGATATCTTCTTTGTTGGTAGAGAGAGACCACAACAAGTGAGGCGAGAGAAATTTTAAGATTTGGATTCTTTTCCATTCCAATATTTAGACCTAGTTCGATAACCATGTAGGTCCCATTTGGTAACCATTTCATTTTTAGTTTTTGTTTTTGAAAATTAAATCTATTTTCTTTCAATGTCTTCCAATGATTTGTATCTTTCTTAAATACAATGGTTGACTTCTTAACCAAATTCCAAAAATAAAAaCAACTTTTTGAAAGCTACTTTTTTtAGTTTTtAAAATTTGGGTTGGATTTTtAAACCACCGGTAGAATACTTGAATGTAGATAACAAAGGAAGAAAGTTGAAAATGAAAGTAGTGTTTATAGACGTAATTTTGAAAAACAAAATGATTACCAAACAAGGCCTTAGTTTCTTGTTTTTGCTTTTTtGAGAATTGTGCTTGTTTTTCTTACAATTTCTTTGCCACGGTTTACGTATTGCCAACCAAAACAATTCCAGAAAAGCAAAAATAGCTATTCAAATACTATTTTTTTtAAAAATAACTTGGCTTAGTTTTTGAAAACACTCCTAAAAGCATTTAACAAATTAAAGAAATCAGTAGTGGAAAGTAGTGTTGATAAGCTTAATTTTGAAAACAAAAACTAAAATCAATTGGGTTATCAAACGAGCCTTGTTGTTTTGATTCCTTATTTGAAATAGTGTTGTCTAAGTAGATCTACTTTGCATTGCTGCCATCTAAGTGGGGATTCTTACCGAGATTTCTCCCACTTAAGTATGGTTTATGCTTATTTTGTAACTATGATATTGACTATTCACTTTTATGCTCTTATAGAAAAACTATTCACTTTTATGTGGTGGTTGATTTTCTGATCAGTTGTTTAATGATCCAAGGCTGACTTTTCTTCTATGGAAAGAACCTGTAACTTTCATTGCATCTTATGGTCCGTGCTTTACACATAAAAAGCTGTGTTTGAGTATATGAATGAAAAGATTTTCTTGCGTGACTTGTTTCTGGAAGAAATCTTATACTTGTATTCCTTTAGGAAGCACCTGCAGTTATCAAGTCATATTATGATGAAAGAATAGTTGGATGTCCTGGAGGTGAAGATGGTGAGTACTTGCAATCTCTTCCTTTCCATGGTTTTTCGCATCATTTGTGCAAGTCTGACCAAATGTTACATAGGCTAATTTTGTGTTTCTTTTATTACACATTAGAATTTCCATCTTACTTCTGTTGCTTCCTTTCTAATTGTAGAGGATGAGCATGATGTTATCTGGTTTCGGCTGAGGAAAGGAGTGCCACATGAGTGCCCTGTGTGCTCGCAGTACTTTGTGGTTAGAATTCATTTTAAACTATTATGTTATGTTGATATTGTATATTTCTTCACAAAATTTCAATTGGCATTTTCCAATCAGCATGTTCGGCTCCTTTTGGAGGGAAATGACACGATACTCAAAACTACTTAAATTGCAATACTATAACTATGGAAAGTGTTTTTAACTAATCTTGCAAATAGTTTTCAAGATTATTTTTTGATGACTGTGGCCTACATAACCAAAAATGCTTAGATCAAAATCATGCTTTTTGAGAAATAAATTATTGTTAATCTTTCAATGTGTGTGTGTGTATTAATAACTTAGTATTTGTTATGTTTTAAAAAAAaTGCGATATAGGAATTAAGAGTTCTCTCCCTCTTCCATGTTATCCTATACTCCTTCGATAGGATGTAGGCATTAGTGGTATATTAATAGCTTTGTTCTGTATCTTCCAAAGAACAAGGCTTTTTTCAAATAAGCCTATTCATTTGGCATCCTAATCTATTTCCTATTCAAAGACCAGACTTTTGCCTCTATGATTTCACTAATTGTAATTTGTGTTTCACAGCTGGAAGTTGTGGGACCTGGAGGATCGCCAGATGGTTATGGAAATGATGATCACCATCATTGATCAACAGTTGTTCTTGTCGAGAATAAAACTTGGCTTTTAGAAGAAACAAATATCACAATTGGTGCAGTTCTTGTTTAAAGCTGTGTTTTGTTTGTTTTCTACTGTTGTTTCTTTTGCAGTTCCTTCAGCAACAAAAAGGAATTCTGAGTTTTTTCAAAGTCAGTCGCGGACACTGGCAACTCATCTGCTAGAAGTACAATTTTTTtAATTTTAGCTTTTCTTCTATGAATTTCGTAATAATTGAAGGCATCTCAATTCTTTTCCAACCAAACTCATTGATCTTAGAAAATAATCTATCGTGAACCTGCGGAAAGAAATCGATTTTAGGAAGTTTGAAATGGCTGTATGGGAAGTGGCTTTAGATGCCCCAACTCCTTGCCACTTTTTATTGCAAATCTTGTCCATTGTGTTTTGTTGTAATATTTCTTTTTCATAACTCTTCTTGATGTCAATGTTGTGCTTCAAGTCTTTTCTCATAATTCTTTTAAAGATCTGTGATGCTCTTTACTTAGTTTGGACTTTGTTGCTGAAAGTGATATATGAAAATTTTGGGAG

mRNA sequence

CTTTTTCTTTTCTCCCATTTCCAAAAGAATAGAAGCTGGTGAAGGGCGAGAGAGTGAAGAGCAAACGAGAGCCAAATTCGCCGTTCAAGAGCTGCGACCTGAGATCATACCCCGAAAGTTCACAGATTTCAATCTACCATGTGGAGAAGATTGCTCTCTTCGTCTCTCAAATCCTTAAAATCACTTCCCTCATCATCTACGCCTGCATCCGCTCCCTTGGGATGCATTTCCCAAGCCCCTCGACTCGCTGCTGCTTCTCATCTTTCTCCTTCCTCGACTCTCCCGCTTTTCGCTCGCCATTACGCCTCTGATTCTGCTGATACTGGTCTGAAGAAGACGGTTGAGGATGTTATGCCAATCGCGACCGGACACGAGCGTGAAGAGCTTGAAGCTTCGCTTGAGGGAAAAGACATTCTTGACATAAACCATCCTATTGGCCCTTTTGGAACTAAGGAAGCACCTGCAGTTATCAAGTCATATTATGATGAAAGAATAGTTGGATGTCCTGGAGGTGAAGATGAGGATGAGCATGATGTTATCTGGTTTCGGCTGAGGAAAGGAGTGCCACATGAGTGCCCTGTGTGCTCGCAGTACTTTGTGCTGGAAGTTGTGGGACCTGGAGGATCGCCAGATGGTTATGGAAATGATGATCACCATCATTGATCAACAGTTGTTCTTGTCGAGAATAAAACTTGGCTTTTAGAAGAAACAAATATCACAATTGGTGCAGTTCTTGTTTAAAGCTGTGTTTTGTTTGTTTTCTACTGTTGTTTCTTTTGCAGTTCCTTCAGCAACAAAAAGGAATTCTGAGTTTTTTCAAAGTCAGTCGCGGACACTGGCAACTCATCTGCTAGAAGTACAATTTTTTTAATTTTAGCTTTTCTTCTATGAATTTCGTAATAATTGAAGGCATCTCAATTCTTTTCCAACCAAACTCATTGATCTTAGAAAATAATCTATCGTGAACCTGCGGAAAGAAATCGATTTTAGGAAGTTTGAAATGGCTGTATGGGAAGTGGCTTTAGATGCCCCAACTCCTTGCCACTTTTTATTGCAAATCTTGTCCATTGTGTTTTGTTGTAATATTTCTTTTTCATAACTCTTCTTGATGTCAATGTTGTGCTTCAAGTCTTTTCTCATAATTCTTTTAAAGATCTGTGATGCTCTTTACTTAGTTTGGACTTTGTTGCTGAAAGTGATATATGAAAATTTTGGGAG

Coding sequence (CDS)

ATGTGGAGAAGATTGCTCTCTTCGTCTCTCAAATCCTTAAAATCACTTCCCTCATCATCTACGCCTGCATCCGCTCCCTTGGGATGCATTTCCCAAGCCCCTCGACTCGCTGCTGCTTCTCATCTTTCTCCTTCCTCGACTCTCCCGCTTTTCGCTCGCCATTACGCCTCTGATTCTGCTGATACTGGTCTGAAGAAGACGGTTGAGGATGTTATGCCAATCGCGACCGGACACGAGCGTGAAGAGCTTGAAGCTTCGCTTGAGGGAAAAGACATTCTTGACATAAACCATCCTATTGGCCCTTTTGGAACTAAGGAAGCACCTGCAGTTATCAAGTCATATTATGATGAAAGAATAGTTGGATGTCCTGGAGGTGAAGATGAGGATGAGCATGATGTTATCTGGTTTCGGCTGAGGAAAGGAGTGCCACATGAGTGCCCTGTGTGCTCGCAGTACTTTGTGCTGGAAGTTGTGGGACCTGGAGGATCGCCAGATGGTTATGGAAATGATGATCACCATCATTGA

Protein sequence

MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSADTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIVGCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHHH*
Homology
[Close]
BLAST of Cucsa.300560 vs. Swiss-Prot
Match: CX5B2_ARATH (Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana GN=COX5B-2 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 2.9e-53
Identity = 108/180 (60.00%), Postives = 132/180 (73.33%), Query Frame = 1 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPS---STLP----LFAR 60
           MWRR++SS LKS+ ++ S + P        S    +  ++HLS S   S++P    +F+R
Sbjct: 1   MWRRIVSSHLKSISAVGSCAAP--------SCRHAVVESTHLSLSTRASSIPAYSSIFSR 60

Query: 61  HYASDSADTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKS 120
              S +ADT +KK VEDVMPIATGHE+EEL+A LEG+ + DI+ P GPFGTKEAPAV+KS
Sbjct: 61  LIGSAAADTAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTKEAPAVVKS 120

Query: 121 YYDERIVGCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHH 174
           YYD RIVGCPGGE EDEHDV+WF L KG   ECPVC+QYF LEVVGPGG PDG+G DDHH
Sbjct: 121 YYDMRIVGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFKLEVVGPGGPPDGHG-DDHH 171

[Close]
BLAST of Cucsa.300560 vs. Swiss-Prot
Match: CX5B1_ARATH (Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana GN=COX5B-1 PE=2 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.9e-53
Identity = 101/176 (57.39%), Postives = 129/176 (73.30%), Query Frame = 1 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRR++SS LK+L +   +++P  +            AA+  + S++  +  R ++SDS 
Sbjct: 1   MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFSSDSV 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIV 120
           +T   K VEDVMPIATGHE+EELEA LEG+ + DI+ P GPFGTKEAPA++KSYYD+RIV
Sbjct: 61  ETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSYYDKRIV 120

Query: 121 GCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYG--NDDHHH 175
           GCPGGE EDEHDV+WF L KG   ECPVC+QYF LEVVGPGG PDG+G  +D+HHH
Sbjct: 121 GCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDEDDEHHH 176

[Close]
BLAST of Cucsa.300560 vs. Swiss-Prot
Match: CX5BL_ARATH (Putative cytochrome c oxidase subunit 5b-like OS=Arabidopsis thaliana GN=At1g52710 PE=2 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-25
Identity = 54/93 (58.06%), Postives = 67/93 (72.04%), Query Frame = 1 

Query: 83  LEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIVGCPGGEDEDEHDVIWFRLRKGV 142
           L+    G+ +LDI+HP  PFGTKE+PAV++SY+D+R +GC GGE ED HDV+WF L KG 
Sbjct: 4   LDKEYSGRRLLDIDHPESPFGTKESPAVVQSYFDKRNIGCRGGEGEDGHDVVWFWLDKGK 63

Query: 143 PHECPVCSQYFVLEVVGPGGSPDGYGND-DHHH 175
             ECPVCSQYF        G PDG+G+D DHHH
Sbjct: 64  SFECPVCSQYF------EHGPPDGHGDDEDHHH 90

[Close]
BLAST of Cucsa.300560 vs. Swiss-Prot
Match: COX5B_BOVIN (Cytochrome c oxidase subunit 5B, mitochondrial OS=Bos taurus GN=COX5B PE=1 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 4.4e-09
Identity = 35/81 (43.21%), Postives = 47/81 (58.02%), Query Frame = 1 

Query: 75  ATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIVGCPGGEDEDEHDVI 134
           ATG ERE + A+ +G+D  +I  P    GTKE P ++ S  ++RIVGC    +ED   VI
Sbjct: 44  ATGLEREVMLAARKGQDPYNILAPKATSGTKEDPNLVPSITNKRIVGCIC--EEDNSTVI 103

Query: 135 WFRLRKGVPHECPVCSQYFVL 156
           WF L KG    CP C  ++ L
Sbjct: 104 WFWLHKGEAQRCPSCGTHYKL 122

[Close]
BLAST of Cucsa.300560 vs. Swiss-Prot
Match: COX5B_VULVU (Cytochrome c oxidase subunit 5B, mitochondrial OS=Vulpes vulpes GN=COX5B PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.5e-09
Identity = 35/81 (43.21%), Postives = 46/81 (56.79%), Query Frame = 1 

Query: 75  ATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIVGCPGGEDEDEHDVI 134
           ATG ERE + A+ +G D  +I  P    GTKE P ++ S  ++RIVGC    +ED   VI
Sbjct: 43  ATGLEREVMMAARKGLDPYNILAPKAAAGTKEDPNLVPSITNKRIVGCIC--EEDNSTVI 102

Query: 135 WFRLRKGVPHECPVCSQYFVL 156
           WF L KG    CP C  ++ L
Sbjct: 103 WFWLHKGEAQRCPSCGTHYKL 121

[Close]
BLAST of Cucsa.300560 vs. TrEMBL
Match: A0A0A0LDH6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G538670 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 6.6e-97
Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 1 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIV 120
           DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIV
Sbjct: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIV 120

Query: 121 GCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHHH 175
           GCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYG+DDHHH
Sbjct: 121 GCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGDDDHHH 174

[Close]
BLAST of Cucsa.300560 vs. TrEMBL
Match: A0A0A0KYD4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G004280 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 3.3e-72
Identity = 137/178 (76.97%), Postives = 155/178 (87.08%), Query Frame = 1 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASA-PLGCISQAPRLA--AASHLSPSSTLPLFARHYAS 60
           MWRRLLS  L +LK LPSSST ASA P G IS A RLA  A+S +SPS  + LFARH+++
Sbjct: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA 60

Query: 61  DSA-DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYD 120
           ++A D GLKK VEDVMPIATGHEREELEA+LEG+DILDI++P+GPFGTKEAPAVIKSYYD
Sbjct: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD 120

Query: 121 ERIVGCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHHH 175
           ERIVGCPGGE +DEHDV+WFRL+KG PHECPVC+QYF LEVVGPGGSPDGYGNDD HH
Sbjct: 121 ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHH 178

[Close]
BLAST of Cucsa.300560 vs. TrEMBL
Match: A0A061G9K1_THECC (Rubredoxin-like superfamily protein OS=Theobroma cacao GN=TCM_047059 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.1e-62
Identity = 117/175 (66.86%), Postives = 136/175 (77.71%), Query Frame = 1 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRRL++S LK+L + P  S P +APL            SH+SPS +      H++++SA
Sbjct: 1   MWRRLVTSQLKTLAAAPCRSAPRTAPL---------PFKSHISPSPSAAFLTHHFSTESA 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDIL-DINHPIGPFGTKEAPAVIKSYYDERI 120
           DT +KK VED+MPIATGHEREEL   LEGK IL D+N+P GPFGTKEAPAVIKSYYD+RI
Sbjct: 61  DTAVKKRVEDIMPIATGHEREELAVELEGKKILEDVNYPEGPFGTKEAPAVIKSYYDKRI 120

Query: 121 VGCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHHH 175
           VGCPGGE EDEHDV+WF L KG PHECPVCSQYFVLEVVGPGG PDG+G+DDHHH
Sbjct: 121 VGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHHH 166

[Close]
BLAST of Cucsa.300560 vs. TrEMBL
Match: A0A0B0MPG3_GOSAR (Cytochrome c oxidase subunit 5b-2, mitochondrial-like protein OS=Gossypium arboreum GN=F383_22214 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 4.5e-61
Identity = 119/186 (63.98%), Postives = 139/186 (74.73%), Query Frame = 1 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRRLL+S  KSL +LP  S   +APL            SH+SPS +  L  RH++++SA
Sbjct: 1   MWRRLLTSQFKSLATLPCRSASKTAPL---------PFKSHISPSPSASLLVRHFSAESA 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLE------------GKDIL-DINHPIGPFGTKEA 120
           DT +KK VEDVMPIATGHEREELE+ L+            GK IL D+N+P+GPFGTKEA
Sbjct: 61  DTAVKKRVEDVMPIATGHEREELESELQAIFFLFLFSLCLGKKILEDVNNPVGPFGTKEA 120

Query: 121 PAVIKSYYDERIVGCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGY 174
           PAV+KSYYD+RIVGCPGGE EDEHDV+WF L KG PHECPVCSQYFVLEVVGPGG PDG+
Sbjct: 121 PAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGH 177

[Close]
BLAST of Cucsa.300560 vs. TrEMBL
Match: W9QF69_9ROSA (Cytochrome c oxidase subunit 5b-2 OS=Morus notabilis GN=L484_005136 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 5.9e-61
Identity = 118/174 (67.82%), Postives = 138/174 (79.31%), Query Frame = 1 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRRLLSSS     +L +++TP  +  G +    RL     +S SS+L  FA  +++DSA
Sbjct: 1   MWRRLLSSSNLKTLTLAAAATPCRSASGAV----RLVDRFPVSASSSL--FAGSFSTDSA 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIV 120
           D  +KK VEDVMPIATGHEREELEA LEGKD+L+IN+PIGPFGTKEAPAV+KSYYD+RIV
Sbjct: 61  DKSIKKKVEDVMPIATGHEREELEAELEGKDLLEINYPIGPFGTKEAPAVVKSYYDKRIV 120

Query: 121 GCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHHH 175
           GCPGGE EDEHDV+WF L KG PHECPVCSQYF LEVVGPGGSPDG+ +D HHH
Sbjct: 121 GCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFELEVVGPGGSPDGHDDDGHHH 168

[Close]
BLAST of Cucsa.300560 vs. TAIR10
Match: AT1G80230.1 (AT1G80230.1 Rubredoxin-like superfamily protein)

HSP 1 Score: 209.5 bits (532), Expect = 1.6e-54
Identity = 108/180 (60.00%), Postives = 132/180 (73.33%), Query Frame = 1 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPS---STLP----LFAR 60
           MWRR++SS LKS+ ++ S + P        S    +  ++HLS S   S++P    +F+R
Sbjct: 1   MWRRIVSSHLKSISAVGSCAAP--------SCRHAVVESTHLSLSTRASSIPAYSSIFSR 60

Query: 61  HYASDSADTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKS 120
              S +ADT +KK VEDVMPIATGHE+EEL+A LEG+ + DI+ P GPFGTKEAPAV+KS
Sbjct: 61  LIGSAAADTAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTKEAPAVVKS 120

Query: 121 YYDERIVGCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHH 174
           YYD RIVGCPGGE EDEHDV+WF L KG   ECPVC+QYF LEVVGPGG PDG+G DDHH
Sbjct: 121 YYDMRIVGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFKLEVVGPGGPPDGHG-DDHH 171

[Close]
BLAST of Cucsa.300560 vs. TAIR10
Match: AT3G15640.1 (AT3G15640.1 Rubredoxin-like superfamily protein)

HSP 1 Score: 208.8 bits (530), Expect = 2.8e-54
Identity = 101/176 (57.39%), Postives = 129/176 (73.30%), Query Frame = 1 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRR++SS LK+L +   +++P  +            AA+  + S++  +  R ++SDS 
Sbjct: 1   MWRRIVSSQLKTLAADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFSSDSV 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIV 120
           +T   K VEDVMPIATGHE+EELEA LEG+ + DI+ P GPFGTKEAPA++KSYYD+RIV
Sbjct: 61  ETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSYYDKRIV 120

Query: 121 GCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYG--NDDHHH 175
           GCPGGE EDEHDV+WF L KG   ECPVC+QYF LEVVGPGG PDG+G  +D+HHH
Sbjct: 121 GCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDEDDEHHH 176

[Close]
BLAST of Cucsa.300560 vs. TAIR10
Match: AT1G52710.1 (AT1G52710.1 Rubredoxin-like superfamily protein)

HSP 1 Score: 117.9 bits (294), Expect = 6.5e-27
Identity = 54/93 (58.06%), Postives = 67/93 (72.04%), Query Frame = 1 

Query: 83  LEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIVGCPGGEDEDEHDVIWFRLRKGV 142
           L+    G+ +LDI+HP  PFGTKE+PAV++SY+D+R +GC GGE ED HDV+WF L KG 
Sbjct: 4   LDKEYSGRRLLDIDHPESPFGTKESPAVVQSYFDKRNIGCRGGEGEDGHDVVWFWLDKGK 63

Query: 143 PHECPVCSQYFVLEVVGPGGSPDGYGND-DHHH 175
             ECPVCSQYF        G PDG+G+D DHHH
Sbjct: 64  SFECPVCSQYF------EHGPPDGHGDDEDHHH 90

[Close]
BLAST of Cucsa.300560 vs. NCBI nr
Match: gi|449467060|ref|XP_004151243.1| (PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial [Cucumis sativus])

HSP 1 Score: 361.3 bits (926), Expect = 9.5e-97
Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 1 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIV 120
           DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIV
Sbjct: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYDERIV 120

Query: 121 GCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHHH 175
           GCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYG+DDHHH
Sbjct: 121 GCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGDDDHHH 174

[Close]
BLAST of Cucsa.300560 vs. NCBI nr
Match: gi|449469018|ref|XP_004152218.1| (PREDICTED: cytochrome c oxidase subunit 5b-1, mitochondrial [Cucumis sativus])

HSP 1 Score: 279.3 bits (713), Expect = 4.8e-72
Identity = 137/178 (76.97%), Postives = 155/178 (87.08%), Query Frame = 1 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASA-PLGCISQAPRLA--AASHLSPSSTLPLFARHYAS 60
           MWRRLLS  L +LK LPSSST ASA P G IS A RLA  A+S +SPS  + LFARH+++
Sbjct: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA 60

Query: 61  DSA-DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYD 120
           ++A D GLKK VEDVMPIATGHEREELEA+LEG+DILDI++P+GPFGTKEAPAVIKSYYD
Sbjct: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD 120

Query: 121 ERIVGCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHHH 175
           ERIVGCPGGE +DEHDV+WFRL+KG PHECPVC+QYF LEVVGPGGSPDGYGNDD HH
Sbjct: 121 ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHH 178

[Close]
BLAST of Cucsa.300560 vs. NCBI nr
Match: gi|659108578|ref|XP_008454275.1| (PREDICTED: cytochrome c oxidase subunit 5b-1, mitochondrial [Cucumis melo])

HSP 1 Score: 276.9 bits (707), Expect = 2.4e-71
Identity = 138/178 (77.53%), Postives = 154/178 (86.52%), Query Frame = 1 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASA-PLGCISQAPRLA--AASHLSPSSTLPLFARHYAS 60
           MWRRLLS  L +LK LPSSST ASA P G IS A RLA  A+S +SPS  + LFARH+++
Sbjct: 1   MWRRLLSLHLNALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPCVSLFARHFSA 60

Query: 61  DSA-DTGLKKTVEDVMPIATGHEREELEASLEGKDILDINHPIGPFGTKEAPAVIKSYYD 120
           ++A D GL+K VEDVMPIATGHEREELEA+LEG+DILDIN+P+GPFGTKEAPAVIKSYYD
Sbjct: 61  EAAVDAGLRKNVEDVMPIATGHEREELEATLEGRDILDINNPVGPFGTKEAPAVIKSYYD 120

Query: 121 ERIVGCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHHH 175
           ERIVGCPGGE EDEHDVIWFRLRKG P ECPVC+QYF LEVVGPGGSPDGYG+DD HH
Sbjct: 121 ERIVGCPGGEGEDEHDVIWFRLRKGEPLECPVCTQYFALEVVGPGGSPDGYGDDDDHH 178

[Close]
BLAST of Cucsa.300560 vs. NCBI nr
Match: gi|590617999|ref|XP_007023938.1| (Rubredoxin-like superfamily protein [Theobroma cacao])

HSP 1 Score: 247.7 bits (631), Expect = 1.5e-62
Identity = 117/175 (66.86%), Postives = 136/175 (77.71%), Query Frame = 1 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRRL++S LK+L + P  S P +APL            SH+SPS +      H++++SA
Sbjct: 1   MWRRLVTSQLKTLAAAPCRSAPRTAPL---------PFKSHISPSPSAAFLTHHFSTESA 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLEGKDIL-DINHPIGPFGTKEAPAVIKSYYDERI 120
           DT +KK VED+MPIATGHEREEL   LEGK IL D+N+P GPFGTKEAPAVIKSYYD+RI
Sbjct: 61  DTAVKKRVEDIMPIATGHEREELAVELEGKKILEDVNYPEGPFGTKEAPAVIKSYYDKRI 120

Query: 121 VGCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHHH 175
           VGCPGGE EDEHDV+WF L KG PHECPVCSQYFVLEVVGPGG PDG+G+DDHHH
Sbjct: 121 VGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHHH 166

[Close]
BLAST of Cucsa.300560 vs. NCBI nr
Match: gi|728812382|gb|KHG00786.1| (Cytochrome c oxidase subunit 5b-2, mitochondrial -like protein [Gossypium arboreum])

HSP 1 Score: 242.3 bits (617), Expect = 6.4e-61
Identity = 119/186 (63.98%), Postives = 139/186 (74.73%), Query Frame = 1 

Query: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAPRLAAASHLSPSSTLPLFARHYASDSA 60
           MWRRLL+S  KSL +LP  S   +APL            SH+SPS +  L  RH++++SA
Sbjct: 1   MWRRLLTSQFKSLATLPCRSASKTAPL---------PFKSHISPSPSASLLVRHFSAESA 60

Query: 61  DTGLKKTVEDVMPIATGHEREELEASLE------------GKDIL-DINHPIGPFGTKEA 120
           DT +KK VEDVMPIATGHEREELE+ L+            GK IL D+N+P+GPFGTKEA
Sbjct: 61  DTAVKKRVEDVMPIATGHEREELESELQAIFFLFLFSLCLGKKILEDVNNPVGPFGTKEA 120

Query: 121 PAVIKSYYDERIVGCPGGEDEDEHDVIWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGY 174
           PAV+KSYYD+RIVGCPGGE EDEHDV+WF L KG PHECPVCSQYFVLEVVGPGG PDG+
Sbjct: 121 PAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGH 177

The following BLAST results are available for this feature:
BLAST of Cucsa.300560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CX5B2_ARATH2.9e-5360.00Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana GN=COX5... [more]
CX5B1_ARATH4.9e-5357.39Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana GN=COX5... [more]
CX5BL_ARATH1.1e-2558.06Putative cytochrome c oxidase subunit 5b-like OS=Arabidopsis thaliana GN=At1g527... [more]
COX5B_BOVIN4.4e-0943.21Cytochrome c oxidase subunit 5B, mitochondrial OS=Bos taurus GN=COX5B PE=1 SV=2[more]
COX5B_VULVU7.5e-0943.21Cytochrome c oxidase subunit 5B, mitochondrial OS=Vulpes vulpes GN=COX5B PE=1 SV... [more]
BLAST of Cucsa.300560 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDH6_CUCSA6.6e-9799.43Uncharacterized protein OS=Cucumis sativus GN=Csa_3G538670 PE=4 SV=1[more]
A0A0A0KYD4_CUCSA3.3e-7276.97Uncharacterized protein OS=Cucumis sativus GN=Csa_4G004280 PE=4 SV=1[more]
A0A061G9K1_THECC1.1e-6266.86Rubredoxin-like superfamily protein OS=Theobroma cacao GN=TCM_047059 PE=4 SV=1[more]
A0A0B0MPG3_GOSAR4.5e-6163.98Cytochrome c oxidase subunit 5b-2, mitochondrial-like protein OS=Gossypium arbor... [more]
W9QF69_9ROSA5.9e-6167.82Cytochrome c oxidase subunit 5b-2 OS=Morus notabilis GN=L484_005136 PE=4 SV=1[more]
BLAST of Cucsa.300560 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80230.11.6e-5460.00 Rubredoxin-like superfamily protein[more]
AT3G15640.12.8e-5457.39 Rubredoxin-like superfamily protein[more]
AT1G52710.16.5e-2758.06 Rubredoxin-like superfamily protein[more]
BLAST of Cucsa.300560 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449467060|ref|XP_004151243.1|9.5e-9799.43PREDICTED: cytochrome c oxidase subunit 5b-2, mitochondrial [Cucumis sativus][more]
gi|449469018|ref|XP_004152218.1|4.8e-7276.97PREDICTED: cytochrome c oxidase subunit 5b-1, mitochondrial [Cucumis sativus][more]
gi|659108578|ref|XP_008454275.1|2.4e-7177.53PREDICTED: cytochrome c oxidase subunit 5b-1, mitochondrial [Cucumis melo][more]
gi|590617999|ref|XP_007023938.1|1.5e-6266.86Rubredoxin-like superfamily protein [Theobroma cacao][more]
gi|728812382|gb|KHG00786.1|6.4e-6163.98Cytochrome c oxidase subunit 5b-2, mitochondrial -like protein [Gossypium arbore... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002124Cyt_c_oxidase_su5b
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005740mitochondrial envelope
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902600 hydrogen ion transmembrane transport
biological_process GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
cellular_component GO:0005740 mitochondrial envelope
cellular_component GO:0045277 respiratory chain complex IV
molecular_function GO:0004129 cytochrome-c oxidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.300560.1Cucsa.300560.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002124Cytochrome c oxidase, subunit VbPRODOMPD007270coord: 75..155
score: 1.0
IPR002124Cytochrome c oxidase, subunit VbGENE3DG3DSA:2.60.11.10coord: 65..161
score: 9.2
IPR002124Cytochrome c oxidase, subunit VbPANTHERPTHR10122CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIALcoord: 67..174
score: 1.7
IPR002124Cytochrome c oxidase, subunit VbPFAMPF01215COX5Bcoord: 74..161
score: 1.7
IPR002124Cytochrome c oxidase, subunit VbPROFILEPS51359COX5B_2coord: 63..162
score: 21
NoneNo IPR availablePANTHERPTHR10122:SF3SUBFAMILY NOT NAMEDcoord: 67..174
score: 1.7
NoneNo IPR availableunknownSSF57802Rubredoxin-likecoord: 64..161
score: 1.41

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.300560Csa3G538670Cucumber (Chinese Long) v2cgycuB428
Cucsa.300560MELO3C012937Melon (DHL92) v3.5.1cgymeB494
Cucsa.300560CSPI03G25090Wild cucumber (PI 183967)cgycpiB451
Cucsa.300560MELO3C012937.2Melon (DHL92) v3.6.1cgymedB493
Cucsa.300560CsaV3_3G026640Cucumber (Chinese Long) v3cgycucB464
Cucsa.300560Bhi01G002672Wax gourdcgywgoB601
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None