Cucsa.292660 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.292660
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Outward-rectifying potassium channel 4-like protein
Location	scaffold02779 : 214055 .. 214972 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCTTCTTCTTCTTTTGTTCACCTTCTTCCACCTACAAAAAAGTAAAAGATATGTCTTCGATGATGAACTCACAAGGAATGGCTCTGGCCACAGCCATGGCTGCCGTCTCCGGCACCGTTATTCTTCTCTCTTTTTGCATCCAAAAAACCATCCCAATCCATCAATTCTCATCTCCAACTCTCCGTTCTTGTTTTCCCTCCGGTATGAATTAAACGAACCTCTTCTAATTTCATTAATTTCTTTATATATATATAATCTCAATTTCTCTAATTAATTAATTAACCAATTCCTTTTGTTCAGAGTCCAGCAAGAAAAAGAAGAAACAGAATAATCAGAAGAAAAGGGTTCATTTTGCAAAGGACGTCGTGGATCCAATTGGTAACGGGGAGGATTTTCGAAGACAACACGAAATCGCATACAGCAACAATTATTCGTCCTCTTCGCCGGCGCAAAACCCCCCAACAGCAGCGGCAGACCCAAGAATGCCGGCGAACAGAGTGGCACTTTACAACGGGATTATGAGAGATCGTGTTGTTCACCGATACGCTTACTCTTGTTGAAAATATTTTTTCTGTACAAAACTGAAGTTGATTTCTGGCTTCTGGGTGTTTCGGCAAATATTGTAAATACCATTTTTCTGTAGAAATTGAAGTGATTTCCTGTTCTTTCTTATTTTGTTTAGAAAATTAAGAATGAAGAATTGGGGGTTTATTTATTTATGTTGACCGACAATAATAGGAGCTTGGTTTGGTTGAGGAAGCAACTGTAAGGCAACGGTAACGGCTTTTTTTGGGGGGTAGAGAGGAAGGGGGTGTTGTCAACAAAAAAAAAAAAGAAAAGAAAAAAGAAAGGAGGAATTACAATTGAAATTTAAAAATATTTAATAGGATGAGTGTGAGTGGAAAGTTAGGAAGAT

mRNA sequence

cctcttcttcttcTTTTGTTCACCTTCTTCCACCTACAAAAAAGTAAAAGATATGTCTTCGATGATGAACTCACAAGGAATGGCTCTGGCCACAGCCATGGCTGCCGTCTCCGGCACCGTTATTCTTCTCTCTTTTTGCATCCAAAAAACCATCCCAATCCATCAATTCTCATCTCCAACTCTCCGTTCTTGTTTTCCCTCCGAGTCCAGCAAGAAAAAGAAGAAACAGAATAATCAGAAGAAAAGGGTTCATTTTGCAAAGGACGTCGTGGATCCAATTGGTAACGGGGAGGATTTTCGAAGACAACACGAAATCGCATACAGCAACAATTATTCGTCCTCTTCGCCGGCGCAAAACCCCCCAACAGCAGCGGCAGACCCAAGAATGCCGGCGAACAGAGTGGCACTTTACAACGGGATTATGAGAGATCGTGTTGTTCACCGATACGCTTACTCTTGTTGAAAATATTTTTTCTGTACAAAACTGAAGTTGATTTCTGGCTTCTGGGTGTTTCGGCAAATATTGTAAATACCATTTTTCTGTAGAAATTGAAGTGATTTCCTGTTCTTTCTTATTTTGTTTAGAAAATTAAGAATGAAGAATTGGGGGTTTATTTATTTATGTTGACCGACAATAATAGGAGCTTGGTTTGGTTGAGGAAGCAACTGTAAGGCAACGGTAACGGCTTTTTTTGGGGGGTAGAGAGGAAGGGGGTGTTGTCAACaaaaaaaaaaaagaaaagaaaaaagaaaGGAGGAATTACAATTGAAATTTAAAAATATTTAATAGGATGAGTGTGAGTGGAAAGTTAGGAAGAT

Coding sequence (CDS)

ATGTCTTCGATGATGAACTCACAAGGAATGGCTCTGGCCACAGCCATGGCTGCCGTCTCCGGCACCGTTATTCTTCTCTCTTTTTGCATCCAAAAAACCATCCCAATCCATCAATTCTCATCTCCAACTCTCCGTTCTTGTTTTCCCTCCGAGTCCAGCAAGAAAAAGAAGAAACAGAATAATCAGAAGAAAAGGGTTCATTTTGCAAAGGACGTCGTGGATCCAATTGGTAACGGGGAGGATTTTCGAAGACAACACGAAATCGCATACAGCAACAATTATTCGTCCTCTTCGCCGGCGCAAAACCCCCCAACAGCAGCGGCAGACCCAAGAATGCCGGCGAACAGAGTGGCACTTTACAACGGGATTATGAGAGATCGTGTTGTTCACCGATACGCTTACTCTTGTTGA

Protein sequence

MSSMMNSQGMALATAMAAVSGTVILLSFCIQKTIPIHQFSSPTLRSCFPSESSKKKKKQNNQKKRVHFAKDVVDPIGNGEDFRRQHEIAYSNNYSSSSPAQNPPTAAADPRMPANRVALYNGIMRDRVVHRYAYSC*

Homology

[Close]

BLAST of Cucsa.292660 vs. TrEMBL
Match: A0A0A0LWV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G342430 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.2e-71
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MSSMMNSQGMALATAMAAVSGTVILLSFCIQKTIPIHQFSSPTLRSCFPSESSKKKKKQN 60
           MSSMMNSQGMALATAMAAVSGTVILLSFCIQKTIPIHQFSSPTLRSCFPSESSKKKKKQN
Sbjct: 1   MSSMMNSQGMALATAMAAVSGTVILLSFCIQKTIPIHQFSSPTLRSCFPSESSKKKKKQN 60

Query: 61  NQKKRVHFAKDVVDPIGNGEDFRRQHEIAYSNNYSSSSPAQNPPTAAADPRMPANRVALY 120
           NQKKRVHFAKDVVDPIGNGEDFRRQHEIAYSNNYSSSSPAQNPPTAAADPRMPANRVALY
Sbjct: 61  NQKKRVHFAKDVVDPIGNGEDFRRQHEIAYSNNYSSSSPAQNPPTAAADPRMPANRVALY 120

Query: 121 NGIMRDRVVHRYAYSC 137
           NGIMRDRVVHRYAYSC
Sbjct: 121 NGIMRDRVVHRYAYSC 136

[Close]

BLAST of Cucsa.292660 vs. TrEMBL
Match: W9QSU4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_003791 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.5e-30
Identity = 85/148 (57.43%), Postives = 105/148 (70.95%), Query Frame = 1


Query: 1   MSSMMNSQGMALATAMAAVSGTVILLSFCIQKTIPIHQFS------SPTLRSCFPSESSK 60
           MSS+++SQG+ LATAMA VSGTVILL+F +QK+ P  QF       +  LRSC  SE SK
Sbjct: 1   MSSILSSQGVVLATAMA-VSGTVILLAFRLQKSSPNTQFPVTRIPRTQILRSCISSEGSK 60

Query: 61  KKKKQNNQKKRVHFAKDVVDPIGNGEDFRRQH-EIAYSNNYSSSSPAQNPPTAA-----A 120
           K KK+N QK RVHFA+D VDP G+G++FRRQ  EI+ S N  SSS +    ++      +
Sbjct: 61  KDKKKNKQK-RVHFAEDAVDPSGDGKEFRRQRSEISNSLNSKSSSSSSVSDSSLKLKKMS 120

Query: 121 DPRMPANRVALYNGIMRDRVVHRYAYSC 137
           +  MPANRVALYNGI+RDRVVHR AYSC
Sbjct: 121 NKGMPANRVALYNGILRDRVVHRLAYSC 146

[Close]

BLAST of Cucsa.292660 vs. TrEMBL
Match: A0A067GXT7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033125mg PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.5e-29
Identity = 77/135 (57.04%), Postives = 99/135 (73.33%), Query Frame = 1


Query: 1   MSSMMNSQGMALATAMAAVSGTVILLSFCIQKTIPIHQFSSPTLRSCFPSESSKKKKKQN 60
           M+S+++SQGM LATAMAAVSGTVILL+F +QK   I Q S   LRSC  S+ +KK+++  
Sbjct: 1   MTSILSSQGMVLATAMAAVSGTVILLAFRLQKPSEIPQ-SQQVLRSCICSDGNKKRER-- 60

Query: 61  NQKKRVHFAKDVVDPIGNGEDFRRQHEIAYSNNYSSSSPAQNPPTAAADPRMPANRVALY 120
            +KKRVHFA+DVVDP GNG++FR+QH +  +++ SSSS  +          MPANRVALY
Sbjct: 61  -KKKRVHFAEDVVDPRGNGDEFRKQHVVKKASSSSSSSRFK------TSGGMPANRVALY 120

Query: 121 NGIMRDRVVHRYAYS 136
           NGI+RDR V R AYS
Sbjct: 121 NGILRDRTVQRLAYS 125

[Close]

BLAST of Cucsa.292660 vs. TrEMBL
Match: V4UP42_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009903mg PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.5e-29
Identity = 77/135 (57.04%), Postives = 99/135 (73.33%), Query Frame = 1


Query: 1   MSSMMNSQGMALATAMAAVSGTVILLSFCIQKTIPIHQFSSPTLRSCFPSESSKKKKKQN 60
           M+S+++SQGM LATAMAAVSGTVILL+F +QK   I Q S   LRSC  S+ +KK+++  
Sbjct: 1   MTSILSSQGMVLATAMAAVSGTVILLAFRLQKPSEIPQ-SQQVLRSCICSDGNKKRER-- 60

Query: 61  NQKKRVHFAKDVVDPIGNGEDFRRQHEIAYSNNYSSSSPAQNPPTAAADPRMPANRVALY 120
            +KKRVHFA+DVVDP GNG++FR+QH +  +++ SSSS  +          MPANRVALY
Sbjct: 61  -KKKRVHFAEDVVDPRGNGDEFRKQHVVKKASSSSSSSRFK------TSGGMPANRVALY 120

Query: 121 NGIMRDRVVHRYAYS 136
           NGI+RDR V R AYS
Sbjct: 121 NGILRDRTVQRLAYS 125

[Close]

BLAST of Cucsa.292660 vs. TrEMBL
Match: M5VRI6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012838mg PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 8.7e-28
Identity = 79/156 (50.64%), Postives = 101/156 (64.74%), Query Frame = 1


Query: 1   MSSMMNSQGMALATAMAAVSGTVILLSFCIQKTIP--------IHQFSSPTLRSCFPSES 60
           MSS++ SQG+ LATAM AVSGTVILL+  +QK++P        I+Q S   LRSC  SE 
Sbjct: 1   MSSVLGSQGVVLATAM-AVSGTVILLALRLQKSLPNSHFPVDQINQSSPQILRSCISSEG 60

Query: 61  SKKKKKQNNQKKRVHFAKDVVDPIGNGEDFRRQHEIAYSNNYSSSSPAQNPPTAAA---- 120
            K++KK     KRVHFA+DVVDP G+G++FRRQH+I  S + +SSS   +  + ++    
Sbjct: 61  KKRRKK----NKRVHFAEDVVDPSGDGQEFRRQHQIITSTSSNSSSSCLSASSTSSTVLN 120

Query: 121 ---------DPRMPANRVALYNGIMRDRVVHRYAYS 136
                       MPANR ALYNGI+RDRVVHR AYS
Sbjct: 121 FKKTRAQKFKGPMPANRAALYNGILRDRVVHRLAYS 151

[Close]

BLAST of Cucsa.292660 vs. TAIR10
Match: AT3G15760.1 (AT3G15760.1 unknown protein)

HSP 1 Score: 71.2 bits (173), Expect = 5.4e-13
Identity = 54/135 (40.00%), Postives = 69/135 (51.11%), Query Frame = 1


Query: 10  MALATAMAAVSGTVILLSFCIQ------KTIPIHQFSSPTLRSCFPSESSKKKKKQNNQK 69
           + +ATAM   S T + L+   Q          + Q   P LRSC  SE +KK   Q  + 
Sbjct: 9   VVIATAMVC-SSTALFLAMARQFHGNHQNPKVLDQTLRPILRSCLSSEETKK---QGKKI 68

Query: 70  KRVHFAKDVVDPIGNGEDFRRQHEIAYSNNYSSSSPAQNPPTAAADPR---MPANRVALY 129
           K+V FA +V D  GNGE++RR+      N  S   P   P    +  R   MPANR+ALY
Sbjct: 69  KKVRFADNVKDTKGNGEEYRRRE----LNRKSVPKPVTKPGKTGSMCRISTMPANRMALY 128

Query: 130 NGIMRDRVVHRYAYS 136
           NGI+RDR  HR  YS
Sbjct: 129 NGILRDR-DHRVQYS 134

[Close]

BLAST of Cucsa.292660 vs. TAIR10
Match: AT1G52565.1 (AT1G52565.1 unknown protein)

HSP 1 Score: 69.3 bits (168), Expect = 2.1e-12
Identity = 49/122 (40.16%), Postives = 71/122 (58.20%), Query Frame = 1


Query: 7   SQGMALATAMAAVSGTVILLSFCIQKTIPIHQFSSPT-LRSCFPSESSKKKKKQNNQKKR 66
           S G+ +ATAM   S T + L+  I +    +Q S    LRSC  SE  +KKK++ N+KK+
Sbjct: 8   SHGVVIATAMV-FSSTALFLA--ISRQFSGNQTSDQQILRSCLSSE--EKKKQRKNKKKK 67

Query: 67  VHFAKDVVDPIGNGEDFRRQHEIAYSNNYSSSSPAQNPPTAAADPRMPANRVALYNGIMR 126
           V FA++V +  GNGE++R++  +          P +       D  MPANR+ALYNGI+R
Sbjct: 68  VKFAENVKETKGNGEEYRKK-SLRRIVPEQMIKPEKTGSVCRND--MPANRIALYNGILR 121

Query: 127 DR 128
           DR
Sbjct: 128 DR 121

[Close]

BLAST of Cucsa.292660 vs. NCBI nr
Match: gi|449465739|ref|XP_004150585.1| (PREDICTED: uncharacterized protein LOC101222988 [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 3.1e-71
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1


Query: 1   MSSMMNSQGMALATAMAAVSGTVILLSFCIQKTIPIHQFSSPTLRSCFPSESSKKKKKQN 60
           MSSMMNSQGMALATAMAAVSGTVILLSFCIQKTIPIHQFSSPTLRSCFPSESSKKKKKQN
Sbjct: 1   MSSMMNSQGMALATAMAAVSGTVILLSFCIQKTIPIHQFSSPTLRSCFPSESSKKKKKQN 60

Query: 61  NQKKRVHFAKDVVDPIGNGEDFRRQHEIAYSNNYSSSSPAQNPPTAAADPRMPANRVALY 120
           NQKKRVHFAKDVVDPIGNGEDFRRQHEIAYSNNYSSSSPAQNPPTAAADPRMPANRVALY
Sbjct: 61  NQKKRVHFAKDVVDPIGNGEDFRRQHEIAYSNNYSSSSPAQNPPTAAADPRMPANRVALY 120

Query: 121 NGIMRDRVVHRYAYSC 137
           NGIMRDRVVHRYAYSC
Sbjct: 121 NGIMRDRVVHRYAYSC 136

[Close]

BLAST of Cucsa.292660 vs. NCBI nr
Match: gi|659086560|ref|XP_008443997.1| (PREDICTED: uncharacterized protein LOC103487448 [Cucumis melo])

HSP 1 Score: 268.1 bits (684), Expect = 8.6e-69
Identity = 131/136 (96.32%), Postives = 132/136 (97.06%), Query Frame = 1


Query: 1   MSSMMNSQGMALATAMAAVSGTVILLSFCIQKTIPIHQFSSPTLRSCFPSESSKKKKKQN 60
           MSSMMNSQGMALATAMAAVSGTVILLSFCIQKTIPIHQFS PTLRSCFPSESSKKKKKQN
Sbjct: 1   MSSMMNSQGMALATAMAAVSGTVILLSFCIQKTIPIHQFSPPTLRSCFPSESSKKKKKQN 60

Query: 61  NQKKRVHFAKDVVDPIGNGEDFRRQHEIAYSNNYSSSSPAQNPPTAAADPRMPANRVALY 120
           N KKRVHFAKDVVDPIGNGEDFRRQHEIAY+NNYSSSSPAQNPPTAA DPRMPANRVALY
Sbjct: 61  NHKKRVHFAKDVVDPIGNGEDFRRQHEIAYNNNYSSSSPAQNPPTAAVDPRMPANRVALY 120

Query: 121 NGIMRDRVVHRYAYSC 137
           NGIMRDRVVHRY YSC
Sbjct: 121 NGIMRDRVVHRYTYSC 136

[Close]

BLAST of Cucsa.292660 vs. NCBI nr
Match: gi|703076091|ref|XP_010090251.1| (hypothetical protein L484_003791 [Morus notabilis])

HSP 1 Score: 139.8 bits (351), Expect = 3.5e-30
Identity = 85/148 (57.43%), Postives = 105/148 (70.95%), Query Frame = 1


Query: 1   MSSMMNSQGMALATAMAAVSGTVILLSFCIQKTIPIHQFS------SPTLRSCFPSESSK 60
           MSS+++SQG+ LATAMA VSGTVILL+F +QK+ P  QF       +  LRSC  SE SK
Sbjct: 1   MSSILSSQGVVLATAMA-VSGTVILLAFRLQKSSPNTQFPVTRIPRTQILRSCISSEGSK 60

Query: 61  KKKKQNNQKKRVHFAKDVVDPIGNGEDFRRQH-EIAYSNNYSSSSPAQNPPTAA-----A 120
           K KK+N QK RVHFA+D VDP G+G++FRRQ  EI+ S N  SSS +    ++      +
Sbjct: 61  KDKKKNKQK-RVHFAEDAVDPSGDGKEFRRQRSEISNSLNSKSSSSSSVSDSSLKLKKMS 120

Query: 121 DPRMPANRVALYNGIMRDRVVHRYAYSC 137
           +  MPANRVALYNGI+RDRVVHR AYSC
Sbjct: 121 NKGMPANRVALYNGILRDRVVHRLAYSC 146

[Close]

BLAST of Cucsa.292660 vs. NCBI nr
Match: gi|567917840|ref|XP_006450926.1| (hypothetical protein CICLE_v10009903mg [Citrus clementina])

HSP 1 Score: 136.0 bits (341), Expect = 5.1e-29
Identity = 77/135 (57.04%), Postives = 99/135 (73.33%), Query Frame = 1


Query: 1   MSSMMNSQGMALATAMAAVSGTVILLSFCIQKTIPIHQFSSPTLRSCFPSESSKKKKKQN 60
           M+S+++SQGM LATAMAAVSGTVILL+F +QK   I Q S   LRSC  S+ +KK+++  
Sbjct: 1   MTSILSSQGMVLATAMAAVSGTVILLAFRLQKPSEIPQ-SQQVLRSCICSDGNKKRER-- 60

Query: 61  NQKKRVHFAKDVVDPIGNGEDFRRQHEIAYSNNYSSSSPAQNPPTAAADPRMPANRVALY 120
            +KKRVHFA+DVVDP GNG++FR+QH +  +++ SSSS  +          MPANRVALY
Sbjct: 61  -KKKRVHFAEDVVDPRGNGDEFRKQHVVKKASSSSSSSRFK------TSGGMPANRVALY 120

Query: 121 NGIMRDRVVHRYAYS 136
           NGI+RDR V R AYS
Sbjct: 121 NGILRDRTVQRLAYS 125

[Close]

BLAST of Cucsa.292660 vs. NCBI nr
Match: gi|255567041|ref|XP_002524503.1| (PREDICTED: uncharacterized protein LOC8275895 isoform X1 [Ricinus communis])

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-27
Identity = 82/151 (54.30%), Postives = 98/151 (64.90%), Query Frame = 1


Query: 1   MSSMMNSQGMALATAMAAVSGTVILLSFCIQKTIP-------------IHQFSSPTLRSC 60
           M+SM+ SQGM LATAM AVSGTVILL+  +QK++P              HQ     LRSC
Sbjct: 1   MTSMLCSQGMVLATAM-AVSGTVILLALRLQKSLPPSLLPMEQQIPQSSHQ-QQAVLRSC 60

Query: 61  FPSESSKKKKKQNNQKKRVHFAKDVVDPIGNGEDFRRQH-EIAYSNNYSSSSPAQNPPTA 120
             SE  K  KK+  +KKRVHFA+DVVDP G+GE+FRRQH  I  + N SS    +    A
Sbjct: 61  ISSEGKKTNKKK--KKKRVHFAEDVVDPRGDGEEFRRQHGAIVVAKNSSSPPKFKKSSGA 120

Query: 121 AADPR-MPANRVALYNGIMRDRVVHRYAYSC 137
               R MPANRVALY+GI+RDRV+HR AYSC
Sbjct: 121 GVKAREMPANRVALYHGILRDRVIHRLAYSC 147

The following BLAST results are available for this feature:

BLAST of Cucsa.292660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWV6_CUCSA	2.2e-71	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G342430 PE=4 SV=1	[more]
W9QSU4_9ROSA	2.5e-30	57.43	Uncharacterized protein OS=Morus notabilis GN=L484_003791 PE=4 SV=1	[more]
A0A067GXT7_CITSI	3.5e-29	57.04	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033125mg PE=4 SV=1	[more]
V4UP42_9ROSI	3.5e-29	57.04	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009903mg PE=4 SV=1	[more]
M5VRI6_PRUPE	8.7e-28	50.64	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012838mg PE=4 SV=1	[more]

BLAST of Cucsa.292660 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15760.1	5.4e-13	40.00	unknown protein	[more]
AT1G52565.1	2.1e-12	40.16	unknown protein	[more]

BLAST of Cucsa.292660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449465739\|ref\|XP_004150585.1\|	3.1e-71	100.00	PREDICTED: uncharacterized protein LOC101222988 [Cucumis sativus]	[more]
gi\|659086560\|ref\|XP_008443997.1\|	8.6e-69	96.32	PREDICTED: uncharacterized protein LOC103487448 [Cucumis melo]	[more]
gi\|703076091\|ref\|XP_010090251.1\|	3.5e-30	57.43	hypothetical protein L484_003791 [Morus notabilis]	[more]
gi\|567917840\|ref\|XP_006450926.1\|	5.1e-29	57.04	hypothetical protein CICLE_v10009903mg [Citrus clementina]	[more]
gi\|255567041\|ref\|XP_002524503.1\|	1.3e-27	54.30	PREDICTED: uncharacterized protein LOC8275895 isoform X1 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.292660.1	Cucsa.292660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33564	FAMILY NOT NAMED	coord: 1..136 score: 1.9
None	No IPR available	PANTHER	PTHR33564:SF5	SUBFAMILY NOT NAMED	coord: 1..136 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.292660	Cla012233	Watermelon (97103) v1	cgywmB537
Cucsa.292660	Csa1G342430	Cucumber (Chinese Long) v2	cgycuB420
Cucsa.292660	MELO3C010338	Melon (DHL92) v3.5.1	cgymeB487
Cucsa.292660	ClCG06G011200	Watermelon (Charleston Gray)	cgywcgB509
Cucsa.292660	CSPI01G18980	Wild cucumber (PI 183967)	cgycpiB443
Cucsa.292660	CmaCh10G005480	Cucurbita maxima (Rimu)	cgycmaB0817
Cucsa.292660	CmoCh10G005870	Cucurbita moschata (Rifu)	cgycmoB0811
Cucsa.292660	Lsi11G003210	Bottle gourd (USVL1VR-Ls)	cgylsiB475
Cucsa.292660	Cp4.1LG04g09490	Cucurbita pepo (Zucchini)	cgycpeB0776
Cucsa.292660	Cp4.1LG18g04840	Cucurbita pepo (Zucchini)	cgycpeB0773
Cucsa.292660	MELO3C010338.2	Melon (DHL92) v3.6.1	cgymedB485
Cucsa.292660	CsaV3_1G030210	Cucumber (Chinese Long) v3	cgycucB454
Cucsa.292660	Cla97C06G120380	Watermelon (97103) v2	cgywmbB510
Cucsa.292660	Bhi06G001696	Wax gourd	cgywgoB592
Cucsa.292660	Bhi02G000825	Wax gourd	cgywgoB594
Cucsa.292660	Carg09915	Silver-seed gourd	carcgyB0159
Cucsa.292660	Carg12129	Silver-seed gourd	carcgyB0044

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None