Cucsa.291620 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.291620
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Retrotransposon protein
Location	scaffold02766 : 178343 .. 180466 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACTAATGACATTGGATGAACTATTGAATGACCACAAGAGGTTAACTCAAATACCTTGTGATAGTAGGCATAGAATTAGGCACCTAACATACTTTCGAATGATCCACAAGTCTAATCTTGTATGTCGTCAAAGTATAAGAATGAACAAAAGATGTTTTGCAATTCTATGTCATCTACTTAGAACAACCACCGAATCAGCATCGACAAAAGTCAACGACGTAAAGGAATGGTTGTCATGTTCCTCCACGTGCTAGCGCACGATGTAAAAATTTGCGAGATCCAACGGGAGTTTGTATGGTCAAGTGAGACAGTCTCACGACATTTCAACTTAGTGTTGTTGGTAGTGTGTTAGATCTGCATGACAAGTTTGTTGGCAAAACCACAACCAGTGATGGGCACATGCACCAATCTGTGATGGCGGTGTTTTGAGGTTATCGTTTCTTATCTTGGGTTTAATTGAAAGTGAACTTTTGTTCGATGTTCTGATTCGGCATTTATTATTCACTGCAAAATTACCTTGGTGCCTTAGACGACACATACATAAAGGTGAACGTGACCGCCAGTGATCGACCTAGGTATAGAACATAGAAGGGTGAAGTGACCACAAACGTCCTTGGCATATGTGACATGAAGAAATGAGATTTTGTTTTAGTCATATTCGGCTGGAAAGGATTCGCAGCTGACTCACGCATCCTTCGAGATGCTATCTGATGACCCAATGAGCTGAAGGTTCTAAAGGGTAAACGAACTATTACCCAAACTTAAGTTTTTTTAAATACCTTCATTTAATTTACAAAATATAACAAGGTCGATATCATACTAGGATATTACTACCTTTGCGACATGGAGTACCCAAATGCAGACGAATTTCTAGCTTCGTAGAGAGGCCAAAGATATCACCTCCAAGAGTGGTATGGAGTCGAAAATGCACCAACAACATCGAAAGAGTTCTTCAACATGAAACATTCTTACGCACAGAATGTTATTGAACGAGTGTTCAGTCCTCAACGAAAAGTCACACTACCCCGCTCAAGACCAATGTCACACGATTATGGCATGTTGTCTACTGCATAATCTAATAAATCGAGAGATAACGAACGTCAAAATTCTTAAAGACGTCGATGAGGTTGACTTGAACTACGCAACGACTGAAGGTAACAACATAAACTACAATGAGGCCTCAAACAAATGGAGTCAATGGAGGGATGACATCGTCGAGGCGATGTTCAATGGATGGCAGTTGTGTAATCACTAGTAACATTTGAGTTGTTGTAAAAGCACATTATTTTAATTCTTGTAATATGTCACCGTCGATGTCATTTTTATAGAATGTTTGGGTGTACGAACGAATATGTTTGACAACCAACCAATGAACAGAATTAGCAACTTTTTCCATGTGTTCATTGTCTATATAAGTCACTTACGCTGCTTTTTCTCCATTTCTTTGTTAGTATAGCCAGCTCGTAAAGGGCCTCGAAACATCCATGGATGAAGGAAGAGGAGTCCACCCTCTTTGACTGTCTTGTTGACTTAGTGAATGCGAGAGGGTGGAGATAACAATGGGACCTTCATACTCGGTTACCTGATCCAACTAGTGAGAATGTTGAGGGAGAGAATGCCAAGATCCAATTTAACGTCGACCACTGTTATTGAAAGTAGGATCAAGTCTTTGAAGAGAACGATCCACGCAATTGCTGAAATGTGGGGCCCAACATGCGGTGGGTTAAGATAGAATGCCGAGGCTATGTGTATCGTTATGGAGAAGGATGTTTCTGACAGTTGGGATAGGGTAAAAAAAATTAGCGAATGGGGACTTACATCACTATACTAAAAAAACTTACGACTATTTTTACACTTTTTCATAGACGCAGCCTGCAATGAAGGGTCTTCTAAACAAGCCTTTCCCATATTACAACAAACTTTCGTATGTCTTCGAGAAAGATCGTGCAACAGGGGCACATGCAAAGATATTCACTAATGTTAGGTCCAATGTGTCGGACAGATCCGAGGGATTTCAACCAAAAGATAAGATCGATATGGAGTTTCCTACTATGTACTGCCAGGGAATGAACATGTCGCCCGAGGACATGATGGGCACACGACTTGGTAGGTCCAGCGTGTAG

mRNA sequence

ttactaatgacattggatgaactattgaatgaccacaagaggttaactcaaataccttgtgatagtaggcatagaattaggcacctaacatactttcgaatgatccacaagtctaatcttaacaaccaccgaatcagcatcgacaaaagtcaacgacgtaaaggaatggttgtcatgttcctccacgtgctagcgcacgatgtaaaaatttgcgagatccaacgggagtttgtatggtcaagtgagacagtctcacgacatttcaacttagtgttgttggtaagaggccaaagatatcacctccaagagtggtatggagtcgaaaatgcaccaacaacatcgaaagagttcttcaacatgaaacattcttacgcacagaatgttattgaacgaacgcagcctgcaatgaagggtcttctaaacaagcctttcccatattacaacaaactttcgtatgtcttcgagaaagatcgtgcaacaggggcacatgcaaagatattcactaatgttaggtccaatgtgtcggacagatccgagggatttcaaccaaaagataagatcgatatggagtttcctactatgtactgccagggaatgaacatgtcgcccgaggacatgatgggcacacgacttggtaggtccagcgtgtag

Coding sequence (CDS)

TTACTAATGACATTGGATGAACTATTGAATGACCACAAGAGGTTAACTCAAATACCTTGTGATAGTAGGCATAGAATTAGGCACCTAACATACTTTCGAATGATCCACAAGTCTAATCTTAACAACCACCGAATCAGCATCGACAAAAGTCAACGACGTAAAGGAATGGTTGTCATGTTCCTCCACGTGCTAGCGCACGATGTAAAAATTTGCGAGATCCAACGGGAGTTTGTATGGTCAAGTGAGACAGTCTCACGACATTTCAACTTAGTGTTGTTGGTAAGAGGCCAAAGATATCACCTCCAAGAGTGGTATGGAGTCGAAAATGCACCAACAACATCGAAAGAGTTCTTCAACATGAAACATTCTTACGCACAGAATGTTATTGAACGAACGCAGCCTGCAATGAAGGGTCTTCTAAACAAGCCTTTCCCATATTACAACAAACTTTCGTATGTCTTCGAGAAAGATCGTGCAACAGGGGCACATGCAAAGATATTCACTAATGTTAGGTCCAATGTGTCGGACAGATCCGAGGGATTTCAACCAAAAGATAAGATCGATATGGAGTTTCCTACTATGTACTGCCAGGGAATGAACATGTCGCCCGAGGACATGATGGGCACACGACTTGGTAGGTCCAGCGTGTAG

Protein sequence

LLMTLDELLNDHKRLTQIPCDSRHRIRHLTYFRMIHKSNLNNHRISIDKSQRRKGMVVMFLHVLAHDVKICEIQREFVWSSETVSRHFNLVLLVRGQRYHLQEWYGVENAPTTSKEFFNMKHSYAQNVIERTQPAMKGLLNKPFPYYNKLSYVFEKDRATGAHAKIFTNVRSNVSDRSEGFQPKDKIDMEFPTMYCQGMNMSPEDMMGTRLGRSSV*

Homology

[Close]

BLAST of Cucsa.291620 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.2e-16
Identity = 52/95 (54.74%), Postives = 67/95 (70.53%), Query Frame = 1


Query: 1   LLMTLDELLNDHKRLTQIPCDSRHRIRHLTYFRMIHKS--NLNNHRISIDKSQRRKGMVV 60
           LL+ L+ L ND KR+T IP ++RHRIR L YFRMIH +   L +  + +D  +    MV 
Sbjct: 20  LLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGTIAGLTSTEV-VDVEE----MVA 79

Query: 61  MFLHVLAHDVKICEIQREFVWSSETVSRHFNLVLL 94
           MFLH+LAHDVK   I+REF+ S ET+SRHFN+VLL
Sbjct: 80  MFLHILAHDVKSRVIKREFMRSGETISRHFNMVLL 109

[Close]

BLAST of Cucsa.291620 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.3e-13
Identity = 55/169 (32.54%), Postives = 80/169 (47.34%), Query Frame = 1


Query: 48  DKSQRRKGMVVMFLHVLAHDVKICEIQREFVWSS-ETVSRHFNLVLLVRGQRYHLQEWYG 107
           D    R G +     ++A  +    I    + S  + + R F+ +  +RG       W  
Sbjct: 391 DNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWND 450

Query: 108 VENAPTTSKEFFNMKHSYAQNVIERTQPAMKGLLNKPFPYYNKLSYVFEKDRATGAHAKI 167
            +      KE F+          + + PA KGLLNK F +Y++LSYVF KDRATG  A+ 
Sbjct: 451 EKKCIVAEKEVFD----------DWSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAES 510

Query: 168 FTNVRSNVSDRSEGFQPKDKIDMEFPTMYCQGMNMSPEDMMGTRLGRSS 216
           F ++ SN     +        D +FP MY  G+NMSP+D+M TR  R S
Sbjct: 511 FADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVS 549

HSP 2 Score: 71.6 bits (174), Expect = 1.3e-09
Identity = 33/44 (75.00%), Postives = 36/44 (81.82%), Query Frame = 1


Query: 95  RGQRYHLQEWYGVENAPTTSKEFFNMKHSYAQNVIERTQPAMKG 139
           RGQRYHLQEW G ENAP+TSKEFFNMKH  A+NVIER    +KG
Sbjct: 234 RGQRYHLQEWRGPENAPSTSKEFFNMKHYSARNVIERAFGVLKG 277

HSP 3 Score: 91.3 bits (225), Expect = 1.6e-15
Identity = 46/83 (55.42%), Postives = 53/83 (63.86%), Query Frame = 1


Query: 120 MKHSYAQNVIERTQPAMKGLLNKPFPYYNKLSYVFEKDRATGAHAKIFTNVRSNVSDRSE 179
           M  S      ++T PA KGLLNK FPYY++L YVFE+DR TG   K F NV SN     E
Sbjct: 265 MDESRTMGCSDQTHPAAKGLLNKLFPYYDELVYVFERDRVTGQGVKTFVNVESNDPIEYE 324

Query: 180 GFQPKDKIDMEFPTMYCQGMNMS 203
           GFQ  D+ DM+ PTMY QG NMS
Sbjct: 325 GFQTPDENDMKNPTMYSQGFNMS 347

[Close]

BLAST of Cucsa.291620 vs. TrEMBL
Match: A5Y732_CUCME (Transposase OS=Cucumis melo PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-04
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 1


Query: 43  HRISIDKSQRRKGMVVMFLHVLAHDVKICEIQREFVWSSETVSRHFNLVLL 94
           H I + +    + MV +FLHVL H+V    IQR+F+ SSETVSRHFNLVLL
Sbjct: 55  HNILVREIVDVEEMVPVFLHVLVHNVNNRVIQRKFIRSSETVSRHFNLVLL 105

HSP 2 Score: 80.5 bits (197), Expect = 2.8e-12
Identity = 55/175 (31.43%), Postives = 89/175 (50.86%), Query Frame = 1


Query: 48  DKSQRRKGMVVMFLHVLAHDVKICEIQREFVWSS--ETVSRHFNLVLLVRGQRYHLQEWY 107
           D    R G +   + ++A  +  C+++   V     +T+ R F  +  + G       W 
Sbjct: 353 DNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEMLGPACSGFGWN 412

Query: 108 GVENAPTTSKEFFNMKHSYAQNVIERTQPAMKGLLNKPFPYYNKLSYVFEKDRATGAHAK 167
             E      KE F+       N + R+ PA KGLLN PFPYY++L+YVF +DRATG  A+
Sbjct: 413 DEEKCIVAEKELFD-------NWV-RSPPAAKGLLNNPFPYYDELTYVFGRDRATGRFAE 472

Query: 168 IFTNVRSNVSDRSEGFQPKDKIDM-----EFPTMYCQGMNMSPEDMMGTRLGRSS 216
            F +V SN  +   G+   D+ DM     +FP +Y +G+++  +D+  +R  R+S
Sbjct: 473 TFADVGSN--EPGGGY---DRFDMGDGNEDFPPVYSRGVDILQDDVRASRPSRAS 514

[Close]

BLAST of Cucsa.291620 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-08
Identity = 30/44 (68.18%), Postives = 35/44 (79.55%), Query Frame = 1


Query: 95  RGQRYHLQEWYGVENAPTTSKEFFNMKHSYAQNVIERTQPAMKG 139
           +GQRYHLQEW G  NAPT +KE+FNMKHS A+NVIER    +KG
Sbjct: 206 KGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKG 249

HSP 2 Score: 59.3 bits (142), Expect = 6.7e-06
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 1


Query: 56 MVVMFLHVLAHDVKICEIQREFVWSSETVSRHFNLVLL 94
          MV MFLHVLAHDVK   IQ+EFV S ETVSRHFN+VLL
Sbjct: 44 MVAMFLHVLAHDVKNRVIQQEFVRSGETVSRHFNIVLL 81

HSP 3 Score: 66.6 bits (161), Expect = 4.2e-08
Identity = 38/85 (44.71%), Postives = 46/85 (54.12%), Query Frame = 1


Query: 131 RTQPAMKGLLNKPFPYYNKLSYVFEKDRATGAHAKIFTNVRSNVSDRSEGFQPKDKIDME 190
           RT PA KGLLNK FP+Y  LSYVF KD   G   +          D S     +D + +E
Sbjct: 57  RTYPATKGLLNKVFPHYGMLSYVFGKDHTKGPVWRYSRTSGPTCKDPSACVPTEDGLKIE 116

Query: 191 FPTMYCQGMNMSPEDMMGTRLGRSS 216
           FPTM    MN+S +DMM  + GR S
Sbjct: 117 FPTMCSPRMNLSLDDMMVGQSGRFS 141

[Close]

BLAST of Cucsa.291620 vs. TrEMBL
Match: A0A151TEH4_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_011695 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.1e-08
Identity = 39/105 (37.14%), Postives = 53/105 (50.48%), Query Frame = 1


Query: 57  VVMFLHVLAHDVKICEIQREFVWSSETVSRHFNLVLLV---------------------- 116
           + MFLH+LAH+VK   +   +  S E +S+ FN VL V                      
Sbjct: 1   MTMFLHILAHNVKYIIVYFSYCISKEIISKQFNNVLRVVIKVSKYFLVDASYTNGPGFLA 60

Query: 117 --RGQRYHLQEWYGVENAPTTSKEFFNMKHSYAQNVIERTQPAMK 138
             +G RYH+ EW G  N P   KEFFN++HS A+N IER+   +K
Sbjct: 61  PYQGTRYHVNEWIG--NTPQNFKEFFNLRHSSARNPIERSFGILK 103

[Close]

BLAST of Cucsa.291620 vs. TAIR10
Match: AT5G35695.1 (AT5G35695.1 Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 48.5 bits (114), Expect = 6.0e-06
Identity = 29/80 (36.25%), Postives = 42/80 (52.50%), Query Frame = 1


Query: 59  MFLHVL------AHDVKIC-EIQREFVWSSETVSRHFNLVLLVRGQRYHLQEWYGVENAP 118
           +F++VL      AHD ++  +  R+F       +   N +   RG RYHLQE+ G    P
Sbjct: 24  IFIYVLSGWEGSAHDSRVLSDALRKFYLVDCGFANRLNFLAPFRGVRYHLQEFAGQRRDP 83

Query: 119 TTSKEFFNMKHSYAQNVIER 132
            T  E FN++H   +NVIER
Sbjct: 84  ETPHELFNLRHVSLRNVIER 103

[Close]

BLAST of Cucsa.291620 vs. NCBI nr
Match: gi|659131061|ref|XP_008465488.1| (PREDICTED: uncharacterized protein LOC103503107 [Cucumis melo])

HSP 1 Score: 97.1 bits (240), Expect = 4.1e-17
Identity = 57/116 (49.14%), Postives = 70/116 (60.34%), Query Frame = 1


Query: 1   LLMTLDELLNDHKRLTQIPCDSRHRIRHLTYFRMIHKSNLNNHRISIDKSQRR------- 60
           LL+ L+ L ND KR+T IP ++RHRIR L YFRMIH SNL   R +  +  RR       
Sbjct: 20  LLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSNLVCRRST--RMDRRCFVILCH 79

Query: 61  ----------------KGMVVMFLHVLAHDVKICEIQREFVWSSETVSRHFNLVLL 94
                           + MV MFLH+LAH+VK   IQREF+WSSET+ RHFN+VLL
Sbjct: 80  LLRTIAGLTSTEVIDVEEMVAMFLHILAHNVKNRVIQREFMWSSETIFRHFNMVLL 133

[Close]

BLAST of Cucsa.291620 vs. NCBI nr
Match: gi|659131061|ref|XP_008465488.1| (PREDICTED: uncharacterized protein LOC103503107 [Cucumis melo])

HSP 1 Score: 71.6 bits (174), Expect = 1.9e-09
Identity = 33/44 (75.00%), Postives = 36/44 (81.82%), Query Frame = 1


Query: 95  RGQRYHLQEWYGVENAPTTSKEFFNMKHSYAQNVIERTQPAMKG 139
           R QRYHLQEW G ENAP+TSKEFFNMKHS A+NVIER    +KG
Sbjct: 204 RSQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLKG 247

HSP 2 Score: 97.1 bits (240), Expect = 4.1e-17
Identity = 47/85 (55.29%), Postives = 57/85 (67.06%), Query Frame = 1


Query: 131 RTQPAMKGLLNKPFPYYNKLSYVFEKDRATGAHAKIFTNVRSNVSDRSEGFQPKDKIDME 190
           R  P  K LLNK FPYY++L+YVF+KDRATG   + FT++ SN   R EGFQP D  DME
Sbjct: 30  RIHPVAKALLNKSFPYYDELAYVFKKDRATGRGVETFTDIGSNDPSRYEGFQPPDGNDME 89

Query: 191 FPTMYCQGMNMSPEDMMGTRLGRSS 216
            PT+Y QG NMS ED+   R   +S
Sbjct: 90  IPTIYSQGFNMSQEDVWAPRPSSAS 114

[Close]

BLAST of Cucsa.291620 vs. NCBI nr
Match: gi|659123898|ref|XP_008461892.1| (PREDICTED: uncharacterized protein LOC103500386 [Cucumis melo])

HSP 1 Score: 96.7 bits (239), Expect = 5.4e-17
Identity = 54/94 (57.45%), Postives = 62/94 (65.96%), Query Frame = 1


Query: 56  MVVMFLHVLAHDVKICEIQREFVWSSETVSRHFNLVLL-----------VRGQRYHLQEW 115
           MV MFLH+LAHDVK   IQREF+ S      ++ LV +            RGQRYHLQEW
Sbjct: 30  MVAMFLHILAHDVKNRVIQREFMRSG-----YYYLVDVGYPNAEGFLAPYRGQRYHLQEW 89

Query: 116 YGVENAPTTSKEFFNMKHSYAQNVIERTQPAMKG 139
           +G ENAP TSKEFFNMKHS A+NVIER    +KG
Sbjct: 90  HGAENAPATSKEFFNMKHSSARNVIERAFGVLKG 118

[Close]

BLAST of Cucsa.291620 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 93.6 bits (231), Expect = 4.6e-16
Identity = 52/95 (54.74%), Postives = 67/95 (70.53%), Query Frame = 1


Query: 1   LLMTLDELLNDHKRLTQIPCDSRHRIRHLTYFRMIHKS--NLNNHRISIDKSQRRKGMVV 60
           LL+ L+ L ND KR+T IP ++RHRIR L YFRMIH +   L +  + +D  +    MV 
Sbjct: 20  LLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGTIAGLTSTEV-VDVEE----MVA 79

Query: 61  MFLHVLAHDVKICEIQREFVWSSETVSRHFNLVLL 94
           MFLH+LAHDVK   I+REF+ S ET+SRHFN+VLL
Sbjct: 80  MFLHILAHDVKSRVIKREFMRSGETISRHFNMVLL 109

[Close]

BLAST of Cucsa.291620 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 83.2 bits (204), Expect = 6.2e-13
Identity = 55/169 (32.54%), Postives = 80/169 (47.34%), Query Frame = 1


Query: 48  DKSQRRKGMVVMFLHVLAHDVKICEIQREFVWSS-ETVSRHFNLVLLVRGQRYHLQEWYG 107
           D    R G +     ++A  +    I    + S  + + R F+ +  +RG       W  
Sbjct: 391 DNGTFRPGYLNQLARMMAFKIPGSNIHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWND 450

Query: 108 VENAPTTSKEFFNMKHSYAQNVIERTQPAMKGLLNKPFPYYNKLSYVFEKDRATGAHAKI 167
            +      KE F+          + + PA KGLLNK F +Y++LSYVF KDRATG  A+ 
Sbjct: 451 EKKCIVAEKEVFD----------DWSHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAES 510

Query: 168 FTNVRSNVSDRSEGFQPKDKIDMEFPTMYCQGMNMSPEDMMGTRLGRSS 216
           F ++ SN     +        D +FP MY  G+NMSP+D+M TR  R S
Sbjct: 511 FADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVS 549

HSP 2 Score: 71.6 bits (174), Expect = 1.9e-09
Identity = 33/44 (75.00%), Postives = 36/44 (81.82%), Query Frame = 1


Query: 95  RGQRYHLQEWYGVENAPTTSKEFFNMKHSYAQNVIERTQPAMKG 139
           RGQRYHLQEW G ENAP+TSKEFFNMKH  A+NVIER    +KG
Sbjct: 234 RGQRYHLQEWRGPENAPSTSKEFFNMKHYSARNVIERAFGVLKG 277

HSP 3 Score: 93.2 bits (230), Expect = 6.0e-16
Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 1


Query: 131 RTQPAMKGLLNKPFPYYNKLSYVFEKDRATGAHAKIFTNVRSNVSDRSEGFQP-KDKIDM 190
           ++ PA KGLL+K FPYY+ LSYVF KDRATGA ++ F NV SNVS+      P  D  D 
Sbjct: 113 KSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDE 172

Query: 191 EFPTMYCQGMNMSPEDMMGTRLGRSS 216
           + PTMY QG++MSP++M G R G++S
Sbjct: 173 DIPTMYSQGVHMSPDEMFGIRAGQAS 198

The following BLAST results are available for this feature:

BLAST of Cucsa.291620 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GCB5_CUCME	3.2e-16	54.74	Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
E5GCB5_CUCME	4.3e-13	32.54	Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A5Y732_CUCME	2.1e-04	56.86	Transposase OS=Cucumis melo PE=4 SV=1	[more]
E5GBB2_CUCME	1.1e-08	68.18	Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A151TEH4_CAJCA	7.1e-08	37.14	Uncharacterized protein OS=Cajanus cajan GN=KK1_011695 PE=4 SV=1	[more]

BLAST of Cucsa.291620 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G35695.1	6.0e-06	36.25	Putative harbinger transposase-derived nuclease (InterPro:IPR006912)	[more]

BLAST of Cucsa.291620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131061\|ref\|XP_008465488.1\|	4.1e-17	49.14	PREDICTED: uncharacterized protein LOC103503107 [Cucumis melo]	[more]
gi\|659131061\|ref\|XP_008465488.1\|	1.9e-09	75.00	PREDICTED: uncharacterized protein LOC103503107 [Cucumis melo]	[more]
gi\|659123898\|ref\|XP_008461892.1\|	5.4e-17	57.45	PREDICTED: uncharacterized protein LOC103500386 [Cucumis melo]	[more]
gi\|307136287\|gb\|ADN34114.1\|	4.6e-16	54.74	retrotransposon protein [Cucumis melo subsp. melo]	[more]
gi\|307136287\|gb\|ADN34114.1\|	6.2e-13	32.54	retrotransposon protein [Cucumis melo subsp. melo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.291620.1	Cucsa.291620.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.291620	Cucurbita pepo (Zucchini)	cgycpeB0771
Cucsa.291620	Cucurbita pepo (Zucchini)	cgycpeB0772
Cucsa.291620	Bottle gourd (USVL1VR-Ls)	cgylsiB473
Cucsa.291620	Melon (DHL92) v3.6.1	cgymedB483
Cucsa.291620	Silver-seed gourd	carcgyB1031
Cucsa.291620	Cucumber (Chinese Long) v3	cgycucB450
Cucsa.291620	Cucumber (Chinese Long) v3	cgycucB451
Cucsa.291620	Watermelon (97103) v2	cgywmbB508
Cucsa.291620	Wax gourd	cgywgoB591
Cucsa.291620	Cucurbita maxima (Rimu)	cgycmaB0815
Cucsa.291620	Cucurbita maxima (Rimu)	cgycmaB0816
Cucsa.291620	Cucurbita moschata (Rifu)	cgycmoB0809
Cucsa.291620	Cucurbita moschata (Rifu)	cgycmoB0810
Cucsa.291620	Wild cucumber (PI 183967)	cgycpiB440
Cucsa.291620	Cucumber (Chinese Long) v2	cgycuB417
Cucsa.291620	Melon (DHL92) v3.5.1	cgymeB484
Cucsa.291620	Watermelon (97103) v1	cgywmB535