Cucsa.288820 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.288820
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Mitochondrial rRNA methyltransferase
Location	scaffold02698 : 345505 .. 347045 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTAGGGATTTAGTAAGCCCCCAATTGAACTCACTGCCTTTGAGCGTTGGGAGTTCTTTGAGATCTGTGTCCTTGAATAAATCTCGATGTTTTTCGAGTTCCTATCGTCTTAAGGACGAAGGAGTGTTATCTGGGAATAAGCTTCCTTGGTTAGCTGCAGCTAGCAGTGTTGAGAAGGCAAAATGGTTGGATAAATCTACTACAAAGAAGAGAGGGGACCGATCGCCTTGGAAGGAATCAGATTTTAAGTCAAAGAGATTTGGAAAGAACGGCAATAGGTCGTCTCGGGATGAACCGGAAAAGAGATATGGCAAAGAACCAATTGGAAGTGCTAATCGATCGACTTGGGAGGTCTCTGCTGAGAAATTTGCTAGACGAAGTATTGAGTTAGCAGATGAAAAAaGAGAAAGTAGGAGGACAAGAATGGACAATGAAGAGCAAAAAGATGATGATATCGAAAGGAGGGGAAGTTATGAAGAAGTGGAAGATGAAGAAACAGAAGCCATTGCAGACCCTAGATGGGATAAGATTAAAAGTAGATTTAGAGGAATGGTGGATGAAAGAGGTGCAACTGAGAGACCTGAGTTTCAGAGGTGGAATAAACAAGAAAGTTGGGGCAGAAAAACATGGAAGGAAGCTTCTGAATCCACTTTACCTAAAATGATTGGTGAAGGGGTTTATGGTGTTGGACCAGTTTTGGCTGCTTTGTCAGCTGGAAGAAGAGAGTTCTATGCATTGTATGTGCAAGAAGGGATTGACTTGAACAATAACAATAAGAAGAAGAAGGACAAGAAAGGGTTTGAGAAAGTTCTTAAGTTGGCTGAAAAGAATGCATTAACTATCAAGGAAATATCGAAGCACGATCTCAATATGATTTCTGATAACCGCCCTCATCAAGGTCTTGTGTTAGATGCTTCTCCCTTGGAGATGGTAAAAaTAAAaGAATTGGATCCTGTCTCACTTGAAGATGACAAGGGCTCACTTTGGTTGGCTTTGGACGAAGTTACTGACCCACAGAACTTGGGGGCAATAATAAGATCTGCTTATTtCTTTGGCGCATCGGGAGTTGTTTTGTGTGCAAAAAATTCAGCTCCATTAAGTGGTGTGGTTAGTAAAGCAAGTGCTGGTTCACTTGAGTTAATGGAGCTTAGATACTGTAAGAACATGATGCAGTTCTTAACATCCTCGGCCGAAAATGGTTGGAGAGTCCTTGGAGCATCGGTTTCTTCAAAATCCATTGATTTGAAAGAGGTACTGCCCGGTGCACCAACGATTCTAGTTTTGGGCAGTGAAGGCACTGGTTTGAGGCCCTTGGTGGAGAGATCCTGCTCACAACTCGTTAGAATCCCTGGGAATATTCCAGTGGATGTAACAATTGATACAGAAAATGACATTGAAACGACAGATGGGCGCTCGGTGGATGAGTTTAGGTCCTTTATGGCTGTTGAGAGCTTAAACGTCAGCGTTGCAGCAGGTGTGTTTGTTCATCATTTAGTTGGAAACAGTTACAAAAATGAATCATTAGAAACCTCTATTTAA

mRNA sequence

AAATTAGGGATTTAGTAAGCCCCCAATTGAACTCACTGCCTTTGAGCGTTGGGAGTTCTTTGAGATCTGTGTCCTTGAATAAATCTCGATGTTTTTCGAGTTCCTATCGTCTTAAGGACGAAGGAGTGTTATCTGGGAATAAGCTTCCTTGGTTAGCTGCAGCTAGCAGTGTTGAGAAGGCAAAATGGTTGGATAAATCTACTACAAAGAAGAGAGGGGACCGATCGCCTTGGAAGGAATCAGATTTTAAGTCAAAGAGATTTGGAAAGAACGGCAATAGGTCGTCTCGGGATGAACCGGAAAAGAGATATGGCAAAGAACCAATTGGAAGTGCTAATCGATCGACTTGGGAGGTCTCTGCTGAGAAATTTGCTAGACGAAGTATTGAGTTAGCAGATGAaaaaagagaaagtaggaggacaagaatggacaatgaagagcaaaaagatgatgatatcgaaaggaggggaagttatgaagaagtggaagatgaagaaacagaagCCATTGCAGACCCTAGATGGGATAAGATTAAAAGTAGATTTAGAGGAATGGTGGATGAAAGAGGTGCAACTGAGAGACCTGAGTTTCAGAGGTGGAATAAACAAGAAAGTTGGGGCAGAAAAACATGGAAGGAAGCTTCTGAATCCACTTTACCTAAAATGATTGGTGAAGGGGTTTATGGTGTTGGACCAGTTTTGGCTGCTTTGTCAGCTGGAAGAAGAGAGTTCTATGCATTGTATGTGCAAGAAGGGATTGACTTGAACAATAACAATAAGAAGAAGAAGGACAAGAAAGGGTTTGAGAAAGTTCTTAAGTTGGCTGAAAAGAATGCATTAACTATCAAGGAAATATCGAAGCACGATCTCAATATGATTTCTGATAACCGCCCTCATCAAGGTCTTGTGTTAGATGCTTCTCCCTTGGAGATGGTAAAAATAAAAGAATTGGATCCTGTCTCACTTGAAGATGACAAGGGCTCACTTTGGTTGGCTTTGGACGAAGTTACTGACCCACAGAACTTGGGGGCAATAATAAGATCTGCTTATTTCTTTGGCGCATCGGGAGTTGTTTTGTGTGCAAAAAATTCAGCTCCATTAAGTGGTGTGGTTAGTAAAGCAAGTGCTGGTTCACTTGAGTTAATGGAGCTTAGATACTGTAAGAACATGATGCAGTTCTTAACATCCTCGGCCGAAAATGGTTGGAGAGTCCTTGGAGCATCGGTTTCTTCAAAATCCATTGATTTGAAAGAGGTACTGCCCGGTGCACCAACGATTCTAGTTTTGGGCAGTGAAGGCACTGGTTTGAGGCCCTTGGTGGAGAGATCCTGCTCACAACTCGTTAGAATCCCTGGGAATATTCCAGTGGATGTAACAATTGATACAGAAAATGACATTGAAACGACAGATGGGCGCTCGGTGGATGAGTTTAGGTCCTTTATGGCTGTTGAGAGCTTAAACGTCAGCGTTGCAGCAGGTGTGTTTGTTCATCATTTAGTTGGAAACAGTTACAAAAATGAATCATTAGAAACCTCTATTTAA

Coding sequence (CDS)

AAATTAGGGATTTAGTAAGCCCCCAATTGAACTCACTGCCTTTGAGCGTTGGGAGTTCTTTGAGATCTGTGTCCTTGAATAAATCTCGATGTTTTTCGAGTTCCTATCGTCTTAAGGACGAAGGAGTGTTATCTGGGAATAAGCTTCCTTGGTTAGCTGCAGCTAGCAGTGTTGAGAAGGCAAAATGGTTGGATAAATCTACTACAAAGAAGAGAGGGGACCGATCGCCTTGGAAGGAATCAGATTTTAAGTCAAAGAGATTTGGAAAGAACGGCAATAGGTCGTCTCGGGATGAACCGGAAAAGAGATATGGCAAAGAACCAATTGGAAGTGCTAATCGATCGACTTGGGAGGTCTCTGCTGAGAAATTTGCTAGACGAAGTATTGAGTTAGCAGATGAAAAAaGAGAAAGTAGGAGGACAAGAATGGACAATGAAGAGCAAAAAGATGATGATATCGAAAGGAGGGGAAGTTATGAAGAAGTGGAAGATGAAGAAACAGAAGCCATTGCAGACCCTAGATGGGATAAGATTAAAAGTAGATTTAGAGGAATGGTGGATGAAAGAGGTGCAACTGAGAGACCTGAGTTTCAGAGGTGGAATAAACAAGAAAGTTGGGGCAGAAAAACATGGAAGGAAGCTTCTGAATCCACTTTACCTAAAATGATTGGTGAAGGGGTTTATGGTGTTGGACCAGTTTTGGCTGCTTTGTCAGCTGGAAGAAGAGAGTTCTATGCATTGTATGTGCAAGAAGGGATTGACTTGAACAATAACAATAAGAAGAAGAAGGACAAGAAAGGGTTTGAGAAAGTTCTTAAGTTGGCTGAAAAGAATGCATTAACTATCAAGGAAATATCGAAGCACGATCTCAATATGATTTCTGATAACCGCCCTCATCAAGGTCTTGTGTTAGATGCTTCTCCCTTGGAGATGGTAAAAaTAAAaGAATTGGATCCTGTCTCACTTGAAGATGACAAGGGCTCACTTTGGTTGGCTTTGGACGAAGTTACTGACCCACAGAACTTGGGGGCAATAATAAGATCTGCTTATTtCTTTGGCGCATCGGGAGTTGTTTTGTGTGCAAAAAATTCAGCTCCATTAAGTGGTGTGGTTAGTAAAGCAAGTGCTGGTTCACTTGAGTTAATGGAGCTTAGATACTGTAAGAACATGATGCAGTTCTTAACATCCTCGGCCGAAAATGGTTGGAGAGTCCTTGGAGCATCGGTTTCTTCAAAATCCATTGATTTGAAAGAGGTACTGCCCGGTGCACCAACGATTCTAGTTTTGGGCAGTGAAGGCACTGGTTTGAGGCCCTTGGTGGAGAGATCCTGCTCACAACTCGTTAGAATCCCTGGGAATATTCCAGTGGATGTAACAATTGATACAGAAAATGACATTGAAACGACAGATGGGCGCTCGGTGGATGAGTTTAGGTCCTTTATGGCTGTTGAGAGCTTAAACGTCAGCGTTGCAGCAGGTGTGTTTGTTCATCATTTAGTTGGAAACAGTTACAAAAATGAATCATTAGAAACCTCTATTTAA

Protein sequence

IRDLVSPQLNSLPLSVGSSLRSVSLNKSRCFSSSYRLKDEGVLSGNKLPWLAAASSVEKAKWLDKSTTKKRGDRSPWKESDFKSKRFGKNGNRSSRDEPEKRYGKEPIGSANRSTWEVSAEKFARRSIELADEKRESRRTRMDNEEQKDDDIERRGSYEEVEDEETEAIADPRWDKIKSRFRGMVDERGATERPEFQRWNKQESWGRKTWKEASESTLPKMIGEGVYGVGPVLAALSAGRREFYALYVQEGIDLNNNNKKKKDKKGFEKVLKLAEKNALTIKEISKHDLNMISDNRPHQGLVLDASPLEMVKIKELDPVSLEDDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLKEVLPGAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIPVDVTIDTENDIETTDGRSVDEFRSFMAVESLNVSVAAGVFVHHLVGNSYKNESLETSI*

Homology

[Close]

BLAST of Cucsa.288820 vs. Swiss-Prot
Match: MRM1_DICDI (rRNA methyltransferase 1, mitochondrial OS=Dictyostelium discoideum GN=mrm1 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.7e-35
Identity = 94/291 (32.30%), Postives = 149/291 (51.20%), Query Frame = 1


Query: 249 QEGIDLNNNNKKKK-------DKKGF---EKVLKLAEKNALTIKEISKHDLNMISDNRPH 308
           +E  D NNNN  KK       D+K     ++++K + K  + ++ ++K  L+  S  RPH
Sbjct: 262 EEEEDNNNNNNIKKTTFNRYNDRKNLVALKEIVKNSFKLKIPVRSVNKGTLDSFSKGRPH 321

Query: 309 QGLVLDASPLEMVKIKELDPVSLED-----------------------DKGSLWLALDEV 368
           QG++LDASPL ++ I  L+   + +                       DK  LWL LDE+
Sbjct: 322 QGIILDASPLTLLNIDFLEKFDINERVNKRMNGGGGGGGGGGGNKINNDKYPLWLVLDEL 381

Query: 369 TDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTS 428
            DPQN+GAIIR+  FF   GVV+  KNS+P++   SK+S+G+ E   +   +++  FL S
Sbjct: 382 WDPQNVGAIIRNCSFFNIDGVVISNKNSSPITPAASKSSSGACESFVINRTESIEGFLKS 441

Query: 429 SAENGWRVLGASV-----SSKSIDLKEVLPGAPTILVLGSEGTGLRPLVERSCSQLVRIP 488
           S  NGW V+G S+     +   +D+ ++    PTIL+LG+EG GL+P V   C++ ++I 
Sbjct: 442 SQRNGWNVVGTSLDDLNENQPCLDINQIKLDQPTILILGNEGFGLKPSVLEICNKTIKIV 501

Query: 489 GNIPVDVTIDTENDIETTDGRSVDEFRSFMAVESLNVSVAAGVFVHHLVGN 502
           G                              ++SLNVSV +G+ +H L+ +
Sbjct: 502 G--------------------------GNYKIDSLNVSVTSGILIHTLLSS 526

HSP 2 Score: 37.7 bits (86), Expect = 4.4e-01
Identity = 20/49 (40.82%), Postives = 27/49 (55.10%), Query Frame = 1


Query: 224 EGVYGVGPVLAALSAGRREFYALYV---------QEGIDLNNNNKKKKD 264
           + VYG+ PV  ALS+G R F ALYV         + GID+ N    K++
Sbjct: 166 QAVYGINPVWVALSSGNRTFNALYVCGTLLPKLKELGIDIKNIENSKRE 214

[Close]

BLAST of Cucsa.288820 vs. Swiss-Prot
Match: MRM1_SCHPO (rRNA methyltransferase 1, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mrm1 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.6e-33
Identity = 115/319 (36.05%), Postives = 158/319 (49.53%), Query Frame = 1


Query: 213 ASESTLPKMIGEGVYGVGPVLAALSAGRREFYALYVQEGIDLNNNNKKKKDKKGFEKVL- 272
           + E  L K   E V+G   V  AL+  +RE  ALYVQ   D+++          FE+ L 
Sbjct: 21  SKERRLIKEDSEFVFGTHSVKNALATRKRECRALYVQNA-DIHSE---------FEEFLN 80

Query: 273 KLAEKNALTIKEISKHDLNMISDNRPHQGLVLDASPLEMVKIKEL--------------- 332
           KL  K  + IK ++K  LN I+  RPH G+VL+AS L +  I +L               
Sbjct: 81  KLQYK--IPIKSVNKEHLNQITACRPHNGVVLEASSLNVPTISDLLFPAGEEYNNKNGQD 140

Query: 333 --------DPVSLEDDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSG 392
                      S  D+   L++ +D +TDPQN+GA+IRSAY  GA G++L  K++  LS 
Sbjct: 141 SPHNDLNEGKSSSSDNYPPLYVYVDGITDPQNMGAVIRSAYILGAKGILLSKKHNTFLSP 200

Query: 393 VVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKS--------IDLKEVLP 452
           VVSKASAG+LE+  + + KN M FL +S   GW+V+G   +             +K  L 
Sbjct: 201 VVSKASAGALEVFNISHVKNPMVFLRNSVLKGWKVIGTKPALPDNKDQIYTPHKIKTELM 260

Query: 453 GAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIPVDVTIDTENDIETTDGRSVDEFRSFM 500
             P ILVLGSE  GLR  +   CS  V IPG                      D++    
Sbjct: 261 NEPKILVLGSE-KGLRTNILTQCSHYVSIPGG---------------------DKY---- 300

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BLAST of Cucsa.288820 vs. Swiss-Prot
Match: MRM1_HUMAN (rRNA methyltransferase 1, mitochondrial OS=Homo sapiens GN=MRM1 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.2e-30
Identity = 93/289 (32.18%), Postives = 142/289 (49.13%), Query Frame = 1


Query: 224 EGVYGVGPVLAALSAGRREFYALYVQEGIDLNNNNKKKKDKKGFE----KVLKLAEKNAL 283
           E ++G+ P L AL A RR    L +Q G            K G +    ++L++AE   +
Sbjct: 50  ELLFGMTPCLLALQAARRSVARLLLQAG------------KAGLQGKRAELLRMAEARDI 109

Query: 284 TIKEISKHDLNMISDNRPHQGLVLDASPLEMVKIKELDPVSLEDDKGSLWLALDEVTDPQ 343
            +    +  L+ +   + HQG+ ++ SPL     +E    S  DD   LWL LD + DP+
Sbjct: 110 PVLRPRRQKLDTMCRYQVHQGVCMEVSPLRPRPWREAGEASPGDDPQQLWLVLDGIQDPR 169

Query: 344 NLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAEN 403
           N GA++RSA+F G   V+   +NS PL+ VVSK+SAG++E+M++    ++  FL + A+ 
Sbjct: 170 NFGAVLRSAHFLGVDKVITSRRNSCPLTPVVSKSSAGAMEVMDVFSTDDLTGFLQTKAQQ 229

Query: 404 GWRVLGA----------SVSSKSIDLKEVLPGAPTILVLGSEGTGLRPLVERSCSQLVRI 463
           GW V G           S     +   E L   PT+LVLG+EG+GL   V+ SC  L+ I
Sbjct: 230 GWLVAGTVGCPSTEDPQSSEIPIMSCLEFLWERPTLLVLGNEGSGLSQEVQASCQLLLTI 289

Query: 464 PGNIPVDVTIDTENDIETTDGRSVDEFRSFMAVESLNVSVAAGVFVHHL 499
                                  +   +    +ESLNVSVAAG+ +H +
Sbjct: 290 -----------------------LPRRQLPPGLESLNVSVAAGILLHSI 303

[Close]

BLAST of Cucsa.288820 vs. Swiss-Prot
Match: MRM1_MOUSE (rRNA methyltransferase 1, mitochondrial OS=Mus musculus GN=Mrm1 PE=2 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 1.2e-30
Identity = 96/289 (33.22%), Postives = 142/289 (49.13%), Query Frame = 1


Query: 224 EGVYGVGPVLAALSAGRREFYALYVQEGIDLNNNNKKKKDKKGFE----KVLKLAEKNAL 283
           E ++G+ P L AL A RR    L +Q G            K G +    ++L++AE   +
Sbjct: 48  ERLFGLSPCLLALRAARRRVARLLLQAG------------KAGLQGERAELLRVAEARGI 107

Query: 284 TIKEISKHDLNMISDNRPHQGLVLDASPLEMVKIKELDPVSLEDDKGSLWLALDEVTDPQ 343
            +    +  L+ +   + HQG+ ++ SPL      E    S  DD   LWL L+ + DP+
Sbjct: 108 PVLRPRRQKLDALCGYQVHQGVCMEVSPLRPRPCDEAADTSSGDDPQQLWLVLEGLQDPR 167

Query: 344 NLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAEN 403
           NLGA++RSA+F G   V+   +NS PL+ VVSKASAG++E+M++    ++  FL + A+ 
Sbjct: 168 NLGAVMRSAHFLGVDRVITSQRNSCPLTPVVSKASAGAMEVMDVFATPDLPGFLQAKAQQ 227

Query: 404 GWRVLGA--------SVSSK--SIDLKEVLPGAPTILVLGSEGTGLRPLVERSCSQLVRI 463
           GW V+G         S SSK       E +   PT+LVLGSEG+GL   V  SC  L+ I
Sbjct: 228 GWLVVGTVGCPGPEISQSSKVPITSCLEFVWDRPTLLVLGSEGSGLSQEVFASCQLLLTI 287

Query: 464 PGNIPVDVTIDTENDIETTDGRSVDEFRSFMAVESLNVSVAAGVFVHHL 499
                                  +        +ESLNVSVA G+ +H +
Sbjct: 288 -----------------------LPRRHLPPGLESLNVSVATGILLHSI 301

[Close]

BLAST of Cucsa.288820 vs. Swiss-Prot
Match: Y1447_MYCGI (Uncharacterized tRNA/rRNA methyltransferase Mflv_1447 OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_1447 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.3e-24
Identity = 90/270 (33.33%), Postives = 130/270 (48.15%), Query Frame = 1


Query: 224 EGVYGVGPVLAALSAGRREFYALYVQEGIDLNNNNKKKKDKKGFEKVLKLAEKNALTIKE 283
           E V G  PV+  L AG     ALYV  G D         D++  E V ++A    ++I E
Sbjct: 71  EIVLGRNPVVECLRAGVPAT-ALYVALGTDA--------DERLTESV-QMAADRGISILE 130

Query: 284 ISKHDLNMISDNRPHQGLVLDASPLEMVKIKELDPVSLEDDKGSLWLALDEVTDPQNLGA 343
           + +HDL+ ++ N  HQG+ L   P       +L   +  D   +L +ALD ++DP+NLGA
Sbjct: 131 VQRHDLDRMAANGLHQGIALQVPPYAYAHPDDLLRDAKSDAAPALLVALDNISDPRNLGA 190

Query: 344 IIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRV 403
           I+RS   FG  GVVL  + SA ++ V  + SAG+     +    N+ + L   A+ G +V
Sbjct: 191 IVRSVAAFGGHGVVLPQRRSASVTAVAWRTSAGAAARTPVARATNLNRTLKQYADAGLQV 250

Query: 404 LGASVSSKSIDLKEVLPGAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIPVDVTIDTEN 463
           +G      +  + E+    PTI+V+GSEG GL  LV  +C ++V IP   P         
Sbjct: 251 VGLDAGGDT-TIDEIDGLTPTIVVVGSEGKGLSRLVRENCDRIVSIPMAGP--------- 302

Query: 464 DIETTDGRSVDEFRSFMAVESLNVSVAAGV 494
                              ESLN SVAAGV
Sbjct: 311 ------------------TESLNASVAAGV 302

[Close]

BLAST of Cucsa.288820 vs. TrEMBL
Match: A0A0A0LW97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G574920 PE=4 SV=1)

HSP 1 Score: 1011.9 bits (2615), Expect = 2.7e-292
Identity = 512/512 (100.00%), Postives = 512/512 (100.00%), Query Frame = 1


Query: 1   IRDLVSPQLNSLPLSVGSSLRSVSLNKSRCFSSSYRLKDEGVLSGNKLPWLAAASSVEKA 60
           IRDLVSPQLNSLPLSVGSSLRSVSLNKSRCFSSSYRLKDEGVLSGNKLPWLAAASSVEKA
Sbjct: 18  IRDLVSPQLNSLPLSVGSSLRSVSLNKSRCFSSSYRLKDEGVLSGNKLPWLAAASSVEKA 77

Query: 61  KWLDKSTTKKRGDRSPWKESDFKSKRFGKNGNRSSRDEPEKRYGKEPIGSANRSTWEVSA 120
           KWLDKSTTKKRGDRSPWKESDFKSKRFGKNGNRSSRDEPEKRYGKEPIGSANRSTWEVSA
Sbjct: 78  KWLDKSTTKKRGDRSPWKESDFKSKRFGKNGNRSSRDEPEKRYGKEPIGSANRSTWEVSA 137

Query: 121 EKFARRSIELADEKRESRRTRMDNEEQKDDDIERRGSYEEVEDEETEAIADPRWDKIKSR 180
           EKFARRSIELADEKRESRRTRMDNEEQKDDDIERRGSYEEVEDEETEAIADPRWDKIKSR
Sbjct: 138 EKFARRSIELADEKRESRRTRMDNEEQKDDDIERRGSYEEVEDEETEAIADPRWDKIKSR 197

Query: 181 FRGMVDERGATERPEFQRWNKQESWGRKTWKEASESTLPKMIGEGVYGVGPVLAALSAGR 240
           FRGMVDERGATERPEFQRWNKQESWGRKTWKEASESTLPKMIGEGVYGVGPVLAALSAGR
Sbjct: 198 FRGMVDERGATERPEFQRWNKQESWGRKTWKEASESTLPKMIGEGVYGVGPVLAALSAGR 257

Query: 241 REFYALYVQEGIDLNNNNKKKKDKKGFEKVLKLAEKNALTIKEISKHDLNMISDNRPHQG 300
           REFYALYVQEGIDLNNNNKKKKDKKGFEKVLKLAEKNALTIKEISKHDLNMISDNRPHQG
Sbjct: 258 REFYALYVQEGIDLNNNNKKKKDKKGFEKVLKLAEKNALTIKEISKHDLNMISDNRPHQG 317

Query: 301 LVLDASPLEMVKIKELDPVSLEDDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCA 360
           LVLDASPLEMVKIKELDPVSLEDDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCA
Sbjct: 318 LVLDASPLEMVKIKELDPVSLEDDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCA 377

Query: 361 KNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLKEVLP 420
           KNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLKEVLP
Sbjct: 378 KNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLKEVLP 437

Query: 421 GAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIPVDVTIDTENDIETTDGRSVDEFRSFM 480
           GAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIPVDVTIDTENDIETTDGRSVDEFRSFM
Sbjct: 438 GAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIPVDVTIDTENDIETTDGRSVDEFRSFM 497

Query: 481 AVESLNVSVAAGVFVHHLVGNSYKNESLETSI 513
           AVESLNVSVAAGVFVHHLVGNSYKNESLETSI
Sbjct: 498 AVESLNVSVAAGVFVHHLVGNSYKNESLETSI 529

[Close]

BLAST of Cucsa.288820 vs. TrEMBL
Match: A0A061GMB9_THECC (TRNA/rRNA methyltransferase family protein OS=Theobroma cacao GN=TCM_037786 PE=4 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 3.1e-171
Identity = 322/494 (65.18%), Postives = 381/494 (77.13%), Query Frame = 1


Query: 18  SSLRSVSLNKSRCFSS--SYRLKDEGVLS--GNKLPWLAAASSVEKAKWLDKSTTKKRGD 77
           S+++  S  ++R  SS  S R+ +E  LS  G  L WLA+   V +AK   K    K  +
Sbjct: 86  SAVQCCSSVRARSLSSLHSKRVAEERDLSRAGKSLRWLAS-EKVNEAKGSHKVAIGKTNN 145

Query: 78  RSPWKESDFKSKRFGKNGNRSSRDEPEKRYGKEPIGSANRSTWEVSAEKFARRSIELADE 137
           RS W+ES     R  K  N SS +E  KR  K  +G+  +S+WE S   F  +      +
Sbjct: 146 RSSWEES---LDRLAKENNHSSLEEIPKRLEKVTVGNTGQSSWEESGASFFGKKAAYPLD 205

Query: 138 KRESRRTRMDNEEQKDDDIERRGSYEEVE-DEETEAIADPRWDKIKSRFRGMVDERGATE 197
            +ESR+  M  + +    +    S EE    EE E + DPRWDKIKS FRGM D +  +E
Sbjct: 206 IKESRKVSMVRDHRNSSRVGGDESNEEKGVREEDEVVDDPRWDKIKSSFRGMGDIKPGSE 265

Query: 198 RPEFQRWNKQESWGRKTWKEASESTLPKMIGEGVYGVGPVLAALSAGRREFYALYVQEGI 257
           +PEF+RWNKQESWGRKTWKEA+EST+PKM+GEGVYGVGPVLAALSAGRREFYALYVQEG+
Sbjct: 266 KPEFRRWNKQESWGRKTWKEATESTVPKMVGEGVYGVGPVLAALSAGRREFYALYVQEGL 325

Query: 258 DLNNNNKKKKDKKGFEKVLKLAEKNALTIKEISKHDLNMISDNRPHQGLVLDASPLEMVK 317
           DL +NN+KKKDKKGFEKV ++AEK  L++KE+SKHDLNM+ DNRPHQGLVLDASPLEMVK
Sbjct: 326 DLGSNNRKKKDKKGFEKVFRMAEKFGLSVKEVSKHDLNMVVDNRPHQGLVLDASPLEMVK 385

Query: 318 IKELDPVSLEDDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSK 377
           IKEL+PVS++++KGSLW+ALDEVTDPQNLGAIIRS YFFGASGVVLCAKNSAPLSGVVSK
Sbjct: 386 IKELEPVSIDEEKGSLWIALDEVTDPQNLGAIIRSGYFFGASGVVLCAKNSAPLSGVVSK 445

Query: 378 ASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLKEVLPGAPTILVLGSEG 437
           ASAGSLELMELRYCKNMMQFL SSAENGWRVLGASVSSK++ L EVLPG PTILVLGSEG
Sbjct: 446 ASAGSLELMELRYCKNMMQFLVSSAENGWRVLGASVSSKAVPLNEVLPGVPTILVLGSEG 505

Query: 438 TGLRPLVERSCSQLVRIPGNIPVDVTIDTENDIETTD---GRSVDEFRSFMAVESLNVSV 497
           TGLRPLVERSC+QLVRIPGNIPVD+     +D+  T+   G S +EF+SF+AVESLNVSV
Sbjct: 506 TGLRPLVERSCTQLVRIPGNIPVDIAAREVDDLGATEVDSGCSGEEFQSFLAVESLNVSV 565

Query: 498 AAGVFVHHLVGNSY 504
           AAGV +HHL+G S+
Sbjct: 566 AAGVLLHHLIGKSH 575

[Close]

BLAST of Cucsa.288820 vs. TrEMBL
Match: M5VUQ6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002880mg PE=4 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 1.0e-169
Identity = 322/524 (61.45%), Postives = 392/524 (74.81%), Query Frame = 1


Query: 14  LSVGSSLRSVSLN----KSRCFSSSYRLKDEGVLS----GNKLPWLAAASSVEKAKWLDK 73
           +S G  LR+ + N    + R FSS    K  G  S    G +LPWL A +  + AK L+K
Sbjct: 92  VSSGFRLRNATQNWLLIRGRAFSSWSGQKVNGGSSVARAGKRLPWLPA-NKAKGAKGLEK 151

Query: 74  STTKKRGDRSPWKESDFKSKRFGKN-------------GNRSSRDEPEKRYGKEPIGSAN 133
           +TT K    S W+ES  + +    N             G++SS D+  KR  +EP     
Sbjct: 152 ATTAKTSISS-WEESAKRLEEVNDNASWGESARSLDGDGSKSSWDKSAKRLEEEPKSKTG 211

Query: 134 RSTWEVSAEKFARRSIELADEKRESRRTRMDNEEQKDDDIE-RRGSYEEVE------DEE 193
           RS+WEVSAE + RRS      ++ESR   +     +  D   R    EE E      +EE
Sbjct: 212 RSSWEVSAETYVRRSGPSERGRKESRTGMVSMAHDRQSDYRGREKRLEEAETEGDEKEEE 271

Query: 194 TEAIADPRWDKIKSRFRGMVDERGATERPEFQRWNKQESWGRKTWKEASESTLPKMIGEG 253
            EA+ DPRWD+I+++FRGM D +   ERPEF+RWN+QE WG+KTWKEA+ES++P+MIG+G
Sbjct: 272 MEAVDDPRWDRIQNKFRGMEDVKSGRERPEFRRWNRQEDWGKKTWKEATESSVPRMIGQG 331

Query: 254 VYGVGPVLAALSAGRREFYALYVQEGIDLNNNNKKKKDKKGFEKVLKLAEKNALTIKEIS 313
           VYGVGPVLAALSAGRREFYALY+QEG+DL+ NN+KKKDKKGFE++L +A+K  L++K++S
Sbjct: 332 VYGVGPVLAALSAGRREFYALYIQEGLDLSKNNRKKKDKKGFERILIMADKLGLSVKDVS 391

Query: 314 KHDLNMISDNRPHQGLVLDASPLEMVKIKELDPVSLEDDKGSLWLALDEVTDPQNLGAII 373
           KHDLNM +DNRPHQGLVLDASPLEMVKIKELDPVS+E+DK SLW+ALDEVTDPQNLGAII
Sbjct: 392 KHDLNMATDNRPHQGLVLDASPLEMVKIKELDPVSVEEDKCSLWVALDEVTDPQNLGAII 451

Query: 374 RSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLG 433
           RS+YFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLG
Sbjct: 452 RSSYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLG 511

Query: 434 ASVSSKSIDLKEVLPGAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIPVDVTIDTENDI 493
            SVSS++I L EV+P  PT+LVLGSEGTGLRPLVE+SC+ L+RIPGNIPVDV+    +DI
Sbjct: 512 GSVSSRAIPLNEVVPSVPTVLVLGSEGTGLRPLVEKSCTDLIRIPGNIPVDVSAGGADDI 571

Query: 494 ET---TDGRSVDEFRSFMAVESLNVSVAAGVFVHHLVGNSYKNE 507
           ET   + G S +EFRSF+AVESLNVSVAAGV +HHL GN+ + +
Sbjct: 572 ETGEVSHGCSAEEFRSFLAVESLNVSVAAGVLLHHLTGNNNEKD 613

[Close]

BLAST of Cucsa.288820 vs. TrEMBL
Match: W9SEI1_9ROSA (Mitochondrial rRNA methyltransferase OS=Morus notabilis GN=L484_007000 PE=4 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 1.2e-167
Identity = 316/490 (64.49%), Postives = 376/490 (76.73%), Query Frame = 1


Query: 25  LNKSRCFSSSYRLKDEGVLSGNKLPWLAA--ASSVEKAKWLDKSTTKKRG-DRSPWKESD 84
           L K+R FS+S   K    +SG KLPWLA+   + V   + +     +K G ++  W+ES 
Sbjct: 38  LVKARVFSNSSAQK----ISGKKLPWLASRDGNKVGGERQISGKRAEKVGSNKCSWEES- 97

Query: 85  FKSKRFGKNGNRSSRDEPEKRYGKEPIGSANRSTWEVSAEKFARRSIELADEKRESRRTR 144
             +KR  +   +SS DE  KR G   +GS  R                + D   + R   
Sbjct: 98  --AKRLDRESGKSSWDEFAKRSGASLVGSEERRN-------------RIIDRVEDPRGNY 157

Query: 145 MDNEEQKDDDIERRGSYEEVEDEETEAIADPRWDKIKSRFRGMVDERGATERPEFQRWNK 204
           +  EE+ ++++E        EDEE+E ++DPRWDKIKSRFRG+VD R   E+P+F+RWNK
Sbjct: 158 ISGEERVEENVEE-------EDEESEVVSDPRWDKIKSRFRGVVDARDRYEKPDFRRWNK 217

Query: 205 QESWGRKTWKEASESTLPKMIGEGVYGVGPVLAALSAGRREFYALYVQEGIDLNNNNKKK 264
           QE+WGR+TWKEA+ES++PK++GEGVYGVGPVLAALSAGRREFYALYVQEG+DL++NN+KK
Sbjct: 218 QENWGRRTWKEATESSVPKVVGEGVYGVGPVLAALSAGRREFYALYVQEGLDLSSNNRKK 277

Query: 265 KDKKGFEKVLKLAEKNALTIKEISKHDLNMISDNRPHQGLVLDASPLEMVKIKELDPVSL 324
           KDKKGFEKVLK+AEK  L+I E+SKHDLNM+ DNRPHQGLVLDASPLEMVKIKELDPVS+
Sbjct: 278 KDKKGFEKVLKMAEKLGLSINEVSKHDLNMVVDNRPHQGLVLDASPLEMVKIKELDPVSV 337

Query: 325 EDDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELM 384
           E+DK SLW+ALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELM
Sbjct: 338 EEDKNSLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELM 397

Query: 385 ELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLKEVLPGAPTILVLGSEGTGLRPLVER 444
           ELRYCKNMMQFL SSAENGWRVLG SVSSK+I L E +PGAPTILVLGSEG GLRPLVER
Sbjct: 398 ELRYCKNMMQFLVSSAENGWRVLGGSVSSKAIPLNEAVPGAPTILVLGSEGMGLRPLVER 457

Query: 445 SCSQLVRIPGNIPVDVTIDTENDIETTD---GRSVDEFRSFMAVESLNVSVAAGVFVHHL 504
           SC+QLV+IP N+PVD+    E   ET +   G    EFRSF+AVESLNVSVAAGV +HHL
Sbjct: 458 SCTQLVKIPSNVPVDIIPGGEEHSETAEQNAGCLAGEFRSFLAVESLNVSVAAGVLLHHL 500

Query: 505 VG-NSYKNES 508
           +G N YKN++
Sbjct: 518 IGDNYYKNDT 500

[Close]

BLAST of Cucsa.288820 vs. TrEMBL
Match: A0A0D2PIW6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G010100 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 1.2e-165
Identity = 319/495 (64.44%), Postives = 373/495 (75.35%), Query Frame = 1


Query: 16  VGSSLRSVSLNKSRCFSS--SYRLKDEGVLS--GNKLPWLAAASSVEKAKWLDKSTTKKR 75
           + S+++  SL ++R FSS  S R+ ++ V S  G  LPWLA+   V + K   K    K 
Sbjct: 70  IRSAIQCCSLVRARSFSSLNSKRVGEDRVFSKAGKALPWLASGE-VNRGKGSHKVAIAKT 129

Query: 76  GDRSPWKESDFKSKRFGKNGNRSSRDEPEKRYGKEPIGSANRSTWEVSAEKFARRSIELA 135
             RS W+ES     R  K  N SS  E            +N S +     K  + S    
Sbjct: 130 DSRSSWEES---LDRLEKENNSSSSWE-----------ESNESFFGKIGGKDVKESRHRK 189

Query: 136 DEKRESRRTRMDNEEQKDDDIERRGSYEEVEDEETEAIADPRWDKIKSRFRGMVDERGAT 195
            +    RR  ++    K D+     + EE   EE E + DPRWDKIK RFRGMVD    +
Sbjct: 190 VDMIRDRRNGLNGSHSKRDE----SNEEEEVREEDELVNDPRWDKIKGRFRGMVDREFGS 249

Query: 196 ERPEFQRWNKQESWGRKTWKEASESTLPKMIGEGVYGVGPVLAALSAGRREFYALYVQEG 255
           E+PEF+RWNKQESWGRKTWKEA+ESTLPKM+GEGVYGVGPVLAALSAGRREFYALYVQEG
Sbjct: 250 EKPEFRRWNKQESWGRKTWKEATESTLPKMVGEGVYGVGPVLAALSAGRREFYALYVQEG 309

Query: 256 IDLNNNNKKKKDKKGFEKVLKLAEKNALTIKEISKHDLNMISDNRPHQGLVLDASPLEMV 315
           +DL++NN+KKKDKKGFEKV KLAEK  L +KE+SKHDLNMI+DNRPHQGLVLDASPLEMV
Sbjct: 310 LDLSSNNRKKKDKKGFEKVFKLAEKLGLNVKEVSKHDLNMIADNRPHQGLVLDASPLEMV 369

Query: 316 KIKELDPVSLEDDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVS 375
           KIKELDPV  +++K SLW+ALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVS
Sbjct: 370 KIKELDPVP-DEEKVSLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVS 429

Query: 376 KASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLKEVLPGAPTILVLGSE 435
           KASAGSLELMELRYCKNMMQFL SSA+NGWRVLG SVS +++ L +VLPG PTILVLGSE
Sbjct: 430 KASAGSLELMELRYCKNMMQFLVSSAQNGWRVLGGSVSPRAVPLNKVLPGVPTILVLGSE 489

Query: 436 GTGLRPLVERSCSQLVRIPGNIPVDVTIDTENDIETTD---GRSVDEFRSFMAVESLNVS 495
           GTGLRPLVERSC+QLVRIPGNIP D+T    +D+ET +   G S++EFRSF+AVESLNVS
Sbjct: 490 GTGLRPLVERSCTQLVRIPGNIPTDITTGDVDDMETKEVNSGCSIEEFRSFLAVESLNVS 544

Query: 496 VAAGVFVHHLVGNSY 504
           VAAGV +HHL+G+S+
Sbjct: 550 VAAGVLLHHLIGSSH 544

[Close]

BLAST of Cucsa.288820 vs. TAIR10
Match: AT2G19870.1 (AT2G19870.1 tRNA/rRNA methyltransferase (SpoU) family protein)

HSP 1 Score: 493.4 bits (1269), Expect = 1.7e-139
Identity = 273/517 (52.80%), Postives = 347/517 (67.12%), Query Frame = 1


Query: 24  SLNKSRCFSSSYRLK---DEGVLSGNKLPWLAAASSVEKAKWLDKSTTKKRGDRSPWKES 83
           S  KS   S +YR K     G  SG+ + W+ +     + ++       +RGDR  W++ 
Sbjct: 95  SRGKSGLGSKAYRDKRSGGSGRSSGDSI-WVKSDEKPVEERF-------QRGDRPSWEKR 154

Query: 84  D----------FKSKRFGKNGNR-----------SSRDEPEKRYGKEPIGSANRSTWEVS 143
           D           +S+ +G+  NR           S  +E  K+ G         S W  +
Sbjct: 155 DGRNDSGSDRRSRSRGYGETRNRDSFRGRRDDRISEVEEESKKGG-------GNSIWVAN 214

Query: 144 AEKFARRSIELADEKRESRRTRMDNEEQKDDDIERRGSYEEVEDEETEAIA--------- 203
            +K A+         R + R+  D+  +  +    RG     E+ E E +          
Sbjct: 215 DDKPAKEQ-----SPRVNNRSSWDDRTRNQNSFSARGDDRITEEAEEETMNHAPEDGDGI 274

Query: 204 ------DPRWDKIKSRFRGMVDERGATERPEFQRWNKQESWGRKTWKEASESTLPKMIGE 263
                 + RW +IK+RF          +   ++ WN+QESWGRKTW+EA+ES++P++ GE
Sbjct: 275 VEEEPDNTRWSEIKNRFNRYDVRDQGRDDAAYRNWNRQESWGRKTWQEATESSVPRLEGE 334

Query: 264 GVYGVGPVLAALSAGRREFYALYVQEGIDLNNNNKKKKDKKGFEKVLKLAEKNALTIKEI 323
            VYGV PVLAALS GRREFYALYVQEG+DL++NN+KKKDKKGFE+VLK++EK  L IKE 
Sbjct: 335 VVYGVSPVLAALSVGRREFYALYVQEGLDLSSNNRKKKDKKGFERVLKISEKLGLNIKET 394

Query: 324 SKHDLNMISDNRPHQGLVLDASPLEMVKIKELDPVSLEDDKGSLWLALDEVTDPQNLGAI 383
           SKHDLNM++DNRPHQGLVLDASPLE+VK+KELDP+S E++K SLW+ALDEVTDPQNLGAI
Sbjct: 395 SKHDLNMVADNRPHQGLVLDASPLELVKVKELDPISSEEEKYSLWVALDEVTDPQNLGAI 454

Query: 384 IRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVL 443
           IRSAYFFGA+GVV+CAKNSAPLS VVSKASAGSLE+MELRYCKNMMQFL +SAENGWRV+
Sbjct: 455 IRSAYFFGATGVVVCAKNSAPLSAVVSKASAGSLEVMELRYCKNMMQFLEASAENGWRVV 514

Query: 444 GASVSSKSIDLKEVLPGAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIPVDVTIDTEND 502
           G SVS K++ L EVLPG+PTILVLG+EGTGLRPLVERSC+ LVRI GN+P +V +   +D
Sbjct: 515 GGSVSPKAVALNEVLPGSPTILVLGNEGTGLRPLVERSCTDLVRISGNMPNEVAVTESDD 574

[Close]

BLAST of Cucsa.288820 vs. TAIR10
Match: AT4G38020.1 (AT4G38020.1 tRNA/rRNA methyltransferase (SpoU) family protein)

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-07
Identity = 63/259 (24.32%), Postives = 104/259 (40.15%), Query Frame = 1


Query: 258 NKKKKDKKGFEKV-LKLAEKNALTIKEISKHDLNMISDNRPHQGLVLDASPLEMVKIKEL 317
           +++ K  +G E + +++   ++L +K++S      +      + + L   P     +K+ 
Sbjct: 127 HEEAKIPQGLESLSIRIVRVSSLVMKKLSG-----VQSTESVEAIALMRIPSSFTDLKDD 186

Query: 318 DPVSLEDDK----GSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSK 377
             +  + +K        L LD + DP NLG ++RSA  F   G  L      P +    +
Sbjct: 187 KDIITDCNKWFPSAHRVLVLDSIQDPGNLGTLVRSAMAFNWDGAFLLPGCCDPYNDKALR 246

Query: 378 ASAGS-------------LELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLKEVL 437
           AS G+             L+L+E  +    M+ L        + L   VS  S++  + L
Sbjct: 247 ASRGASFQLPIVSGNWNHLKLLENEF---QMKLLAGHPATTTQKL-KPVSKLSVEFAQSL 306

Query: 438 PGAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIPVDVTIDTENDIETTDGRSVDEFRSF 497
              P  L+LGSEG GL     + C           V V+I    D               
Sbjct: 307 AEKPLCLILGSEGNGLSEQARKVC-----------VLVSIPMAGDF-------------- 348

Query: 498 MAVESLNVSVAAGVFVHHL 499
              ESLNVSVA G+F++ L
Sbjct: 367 ---ESLNVSVAGGIFLYML 348

[Close]

BLAST of Cucsa.288820 vs. NCBI nr
Match: gi|449435780|ref|XP_004135672.1| (PREDICTED: uncharacterized protein LOC101220884 [Cucumis sativus])

HSP 1 Score: 1011.9 bits (2615), Expect = 3.9e-292
Identity = 512/512 (100.00%), Postives = 512/512 (100.00%), Query Frame = 1


Query: 1   IRDLVSPQLNSLPLSVGSSLRSVSLNKSRCFSSSYRLKDEGVLSGNKLPWLAAASSVEKA 60
           IRDLVSPQLNSLPLSVGSSLRSVSLNKSRCFSSSYRLKDEGVLSGNKLPWLAAASSVEKA
Sbjct: 18  IRDLVSPQLNSLPLSVGSSLRSVSLNKSRCFSSSYRLKDEGVLSGNKLPWLAAASSVEKA 77

Query: 61  KWLDKSTTKKRGDRSPWKESDFKSKRFGKNGNRSSRDEPEKRYGKEPIGSANRSTWEVSA 120
           KWLDKSTTKKRGDRSPWKESDFKSKRFGKNGNRSSRDEPEKRYGKEPIGSANRSTWEVSA
Sbjct: 78  KWLDKSTTKKRGDRSPWKESDFKSKRFGKNGNRSSRDEPEKRYGKEPIGSANRSTWEVSA 137

Query: 121 EKFARRSIELADEKRESRRTRMDNEEQKDDDIERRGSYEEVEDEETEAIADPRWDKIKSR 180
           EKFARRSIELADEKRESRRTRMDNEEQKDDDIERRGSYEEVEDEETEAIADPRWDKIKSR
Sbjct: 138 EKFARRSIELADEKRESRRTRMDNEEQKDDDIERRGSYEEVEDEETEAIADPRWDKIKSR 197

Query: 181 FRGMVDERGATERPEFQRWNKQESWGRKTWKEASESTLPKMIGEGVYGVGPVLAALSAGR 240
           FRGMVDERGATERPEFQRWNKQESWGRKTWKEASESTLPKMIGEGVYGVGPVLAALSAGR
Sbjct: 198 FRGMVDERGATERPEFQRWNKQESWGRKTWKEASESTLPKMIGEGVYGVGPVLAALSAGR 257

Query: 241 REFYALYVQEGIDLNNNNKKKKDKKGFEKVLKLAEKNALTIKEISKHDLNMISDNRPHQG 300
           REFYALYVQEGIDLNNNNKKKKDKKGFEKVLKLAEKNALTIKEISKHDLNMISDNRPHQG
Sbjct: 258 REFYALYVQEGIDLNNNNKKKKDKKGFEKVLKLAEKNALTIKEISKHDLNMISDNRPHQG 317

Query: 301 LVLDASPLEMVKIKELDPVSLEDDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCA 360
           LVLDASPLEMVKIKELDPVSLEDDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCA
Sbjct: 318 LVLDASPLEMVKIKELDPVSLEDDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCA 377

Query: 361 KNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLKEVLP 420
           KNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLKEVLP
Sbjct: 378 KNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLKEVLP 437

Query: 421 GAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIPVDVTIDTENDIETTDGRSVDEFRSFM 480
           GAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIPVDVTIDTENDIETTDGRSVDEFRSFM
Sbjct: 438 GAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIPVDVTIDTENDIETTDGRSVDEFRSFM 497

Query: 481 AVESLNVSVAAGVFVHHLVGNSYKNESLETSI 513
           AVESLNVSVAAGVFVHHLVGNSYKNESLETSI
Sbjct: 498 AVESLNVSVAAGVFVHHLVGNSYKNESLETSI 529

[Close]

BLAST of Cucsa.288820 vs. NCBI nr
Match: gi|659099797|ref|XP_008450781.1| (PREDICTED: uncharacterized protein LOC103492262 [Cucumis melo])

HSP 1 Score: 964.1 bits (2491), Expect = 9.4e-278
Identity = 487/510 (95.49%), Postives = 499/510 (97.84%), Query Frame = 1


Query: 1   IRDLVSPQLNSLPLSVGSSLRSVSLNKSRCFSSSYRLKDEGVLSGNKLPWLAAASSVEKA 60
           IRDLVSPQLNSLPLSVGSSL+S+SLNKSRCFSSSYRLKDEGVLSGNKLPWLAAA+SVEKA
Sbjct: 18  IRDLVSPQLNSLPLSVGSSLKSLSLNKSRCFSSSYRLKDEGVLSGNKLPWLAAANSVEKA 77

Query: 61  KWLDKSTTKKRGDRSPWKESDFKSKRFGKNGNRSSRDEPEKRYGKEPIGSANRSTWEVSA 120
           KWLDKSTTKKRGDRS WKESDFKSKRFGKNGNRSSRDEPEKRYGKEPIGSANRSTWEVSA
Sbjct: 78  KWLDKSTTKKRGDRSSWKESDFKSKRFGKNGNRSSRDEPEKRYGKEPIGSANRSTWEVSA 137

Query: 121 EKFARRSIELADEKRESRRTRMDNEEQKDDDIERRGSYEEVEDEETEAIADPRWDKIKSR 180
           EKFARR IE ADE+RE RRTRMDNEEQ++DDIERRG+YEE EDEE EAIADPRWDKIKSR
Sbjct: 138 EKFARRGIESADERRE-RRTRMDNEEQENDDIERRGNYEEGEDEEIEAIADPRWDKIKSR 197

Query: 181 FRGMVDERGATERPEFQRWNKQESWGRKTWKEASESTLPKMIGEGVYGVGPVLAALSAGR 240
           FRGMVDERGATERP+FQRWNKQESWGRKTWKEASESTLPKMIGEGVYGVGPVLAALSAGR
Sbjct: 198 FRGMVDERGATERPQFQRWNKQESWGRKTWKEASESTLPKMIGEGVYGVGPVLAALSAGR 257

Query: 241 REFYALYVQEGIDLNNNNKKKKDKKGFEKVLKLAEKNALTIKEISKHDLNMISDNRPHQG 300
           REFYALY+QEGIDLNNNNKKKKDKKGFEKVLKLAEKNALTIKEISKHDLNMISDNRPHQG
Sbjct: 258 REFYALYMQEGIDLNNNNKKKKDKKGFEKVLKLAEKNALTIKEISKHDLNMISDNRPHQG 317

Query: 301 LVLDASPLEMVKIKELDPVSLEDDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCA 360
           LVLD SPLEMVKIKELDPVSLEDDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCA
Sbjct: 318 LVLDTSPLEMVKIKELDPVSLEDDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCA 377

Query: 361 KNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLKEVLP 420
           KNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSA NGWRVLGASVSSKSIDL+EVLP
Sbjct: 378 KNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAGNGWRVLGASVSSKSIDLEEVLP 437

Query: 421 GAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIPVDVTIDTENDIETTDGRSVDEFRSFM 480
           GAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIP +VTID ENDIETTDG SVDEFRSFM
Sbjct: 438 GAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIPANVTIDKENDIETTDGCSVDEFRSFM 497

Query: 481 AVESLNVSVAAGVFVHHLVGNSYKNESLET 511
           AVESLNVSVAAGVFVHHL+GNSYKNESLET
Sbjct: 498 AVESLNVSVAAGVFVHHLIGNSYKNESLET 526

[Close]

BLAST of Cucsa.288820 vs. NCBI nr
Match: gi|590576712|ref|XP_007013032.1| (TRNA/rRNA methyltransferase family protein [Theobroma cacao])

HSP 1 Score: 609.8 bits (1571), Expect = 4.5e-171
Identity = 322/494 (65.18%), Postives = 381/494 (77.13%), Query Frame = 1


Query: 18  SSLRSVSLNKSRCFSS--SYRLKDEGVLS--GNKLPWLAAASSVEKAKWLDKSTTKKRGD 77
           S+++  S  ++R  SS  S R+ +E  LS  G  L WLA+   V +AK   K    K  +
Sbjct: 86  SAVQCCSSVRARSLSSLHSKRVAEERDLSRAGKSLRWLAS-EKVNEAKGSHKVAIGKTNN 145

Query: 78  RSPWKESDFKSKRFGKNGNRSSRDEPEKRYGKEPIGSANRSTWEVSAEKFARRSIELADE 137
           RS W+ES     R  K  N SS +E  KR  K  +G+  +S+WE S   F  +      +
Sbjct: 146 RSSWEES---LDRLAKENNHSSLEEIPKRLEKVTVGNTGQSSWEESGASFFGKKAAYPLD 205

Query: 138 KRESRRTRMDNEEQKDDDIERRGSYEEVE-DEETEAIADPRWDKIKSRFRGMVDERGATE 197
            +ESR+  M  + +    +    S EE    EE E + DPRWDKIKS FRGM D +  +E
Sbjct: 206 IKESRKVSMVRDHRNSSRVGGDESNEEKGVREEDEVVDDPRWDKIKSSFRGMGDIKPGSE 265

Query: 198 RPEFQRWNKQESWGRKTWKEASESTLPKMIGEGVYGVGPVLAALSAGRREFYALYVQEGI 257
           +PEF+RWNKQESWGRKTWKEA+EST+PKM+GEGVYGVGPVLAALSAGRREFYALYVQEG+
Sbjct: 266 KPEFRRWNKQESWGRKTWKEATESTVPKMVGEGVYGVGPVLAALSAGRREFYALYVQEGL 325

Query: 258 DLNNNNKKKKDKKGFEKVLKLAEKNALTIKEISKHDLNMISDNRPHQGLVLDASPLEMVK 317
           DL +NN+KKKDKKGFEKV ++AEK  L++KE+SKHDLNM+ DNRPHQGLVLDASPLEMVK
Sbjct: 326 DLGSNNRKKKDKKGFEKVFRMAEKFGLSVKEVSKHDLNMVVDNRPHQGLVLDASPLEMVK 385

Query: 318 IKELDPVSLEDDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSK 377
           IKEL+PVS++++KGSLW+ALDEVTDPQNLGAIIRS YFFGASGVVLCAKNSAPLSGVVSK
Sbjct: 386 IKELEPVSIDEEKGSLWIALDEVTDPQNLGAIIRSGYFFGASGVVLCAKNSAPLSGVVSK 445

Query: 378 ASAGSLELMELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLKEVLPGAPTILVLGSEG 437
           ASAGSLELMELRYCKNMMQFL SSAENGWRVLGASVSSK++ L EVLPG PTILVLGSEG
Sbjct: 446 ASAGSLELMELRYCKNMMQFLVSSAENGWRVLGASVSSKAVPLNEVLPGVPTILVLGSEG 505

Query: 438 TGLRPLVERSCSQLVRIPGNIPVDVTIDTENDIETTD---GRSVDEFRSFMAVESLNVSV 497
           TGLRPLVERSC+QLVRIPGNIPVD+     +D+  T+   G S +EF+SF+AVESLNVSV
Sbjct: 506 TGLRPLVERSCTQLVRIPGNIPVDIAAREVDDLGATEVDSGCSGEEFQSFLAVESLNVSV 565

Query: 498 AAGVFVHHLVGNSY 504
           AAGV +HHL+G S+
Sbjct: 566 AAGVLLHHLIGKSH 575

[Close]

BLAST of Cucsa.288820 vs. NCBI nr
Match: gi|595813648|ref|XP_007203612.1| (hypothetical protein PRUPE_ppa002880mg [Prunus persica])

HSP 1 Score: 604.7 bits (1558), Expect = 1.4e-169
Identity = 322/524 (61.45%), Postives = 392/524 (74.81%), Query Frame = 1


Query: 14  LSVGSSLRSVSLN----KSRCFSSSYRLKDEGVLS----GNKLPWLAAASSVEKAKWLDK 73
           +S G  LR+ + N    + R FSS    K  G  S    G +LPWL A +  + AK L+K
Sbjct: 92  VSSGFRLRNATQNWLLIRGRAFSSWSGQKVNGGSSVARAGKRLPWLPA-NKAKGAKGLEK 151

Query: 74  STTKKRGDRSPWKESDFKSKRFGKN-------------GNRSSRDEPEKRYGKEPIGSAN 133
           +TT K    S W+ES  + +    N             G++SS D+  KR  +EP     
Sbjct: 152 ATTAKTSISS-WEESAKRLEEVNDNASWGESARSLDGDGSKSSWDKSAKRLEEEPKSKTG 211

Query: 134 RSTWEVSAEKFARRSIELADEKRESRRTRMDNEEQKDDDIE-RRGSYEEVE------DEE 193
           RS+WEVSAE + RRS      ++ESR   +     +  D   R    EE E      +EE
Sbjct: 212 RSSWEVSAETYVRRSGPSERGRKESRTGMVSMAHDRQSDYRGREKRLEEAETEGDEKEEE 271

Query: 194 TEAIADPRWDKIKSRFRGMVDERGATERPEFQRWNKQESWGRKTWKEASESTLPKMIGEG 253
            EA+ DPRWD+I+++FRGM D +   ERPEF+RWN+QE WG+KTWKEA+ES++P+MIG+G
Sbjct: 272 MEAVDDPRWDRIQNKFRGMEDVKSGRERPEFRRWNRQEDWGKKTWKEATESSVPRMIGQG 331

Query: 254 VYGVGPVLAALSAGRREFYALYVQEGIDLNNNNKKKKDKKGFEKVLKLAEKNALTIKEIS 313
           VYGVGPVLAALSAGRREFYALY+QEG+DL+ NN+KKKDKKGFE++L +A+K  L++K++S
Sbjct: 332 VYGVGPVLAALSAGRREFYALYIQEGLDLSKNNRKKKDKKGFERILIMADKLGLSVKDVS 391

Query: 314 KHDLNMISDNRPHQGLVLDASPLEMVKIKELDPVSLEDDKGSLWLALDEVTDPQNLGAII 373
           KHDLNM +DNRPHQGLVLDASPLEMVKIKELDPVS+E+DK SLW+ALDEVTDPQNLGAII
Sbjct: 392 KHDLNMATDNRPHQGLVLDASPLEMVKIKELDPVSVEEDKCSLWVALDEVTDPQNLGAII 451

Query: 374 RSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLG 433
           RS+YFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLG
Sbjct: 452 RSSYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLTSSAENGWRVLG 511

Query: 434 ASVSSKSIDLKEVLPGAPTILVLGSEGTGLRPLVERSCSQLVRIPGNIPVDVTIDTENDI 493
            SVSS++I L EV+P  PT+LVLGSEGTGLRPLVE+SC+ L+RIPGNIPVDV+    +DI
Sbjct: 512 GSVSSRAIPLNEVVPSVPTVLVLGSEGTGLRPLVEKSCTDLIRIPGNIPVDVSAGGADDI 571

Query: 494 ET---TDGRSVDEFRSFMAVESLNVSVAAGVFVHHLVGNSYKNE 507
           ET   + G S +EFRSF+AVESLNVSVAAGV +HHL GN+ + +
Sbjct: 572 ETGEVSHGCSAEEFRSFLAVESLNVSVAAGVLLHHLTGNNNEKD 613

[Close]

BLAST of Cucsa.288820 vs. NCBI nr
Match: gi|703154225|ref|XP_010110885.1| (Mitochondrial rRNA methyltransferase [Morus notabilis])

HSP 1 Score: 597.8 bits (1540), Expect = 1.8e-167
Identity = 316/490 (64.49%), Postives = 376/490 (76.73%), Query Frame = 1


Query: 25  LNKSRCFSSSYRLKDEGVLSGNKLPWLAA--ASSVEKAKWLDKSTTKKRG-DRSPWKESD 84
           L K+R FS+S   K    +SG KLPWLA+   + V   + +     +K G ++  W+ES 
Sbjct: 38  LVKARVFSNSSAQK----ISGKKLPWLASRDGNKVGGERQISGKRAEKVGSNKCSWEES- 97

Query: 85  FKSKRFGKNGNRSSRDEPEKRYGKEPIGSANRSTWEVSAEKFARRSIELADEKRESRRTR 144
             +KR  +   +SS DE  KR G   +GS  R                + D   + R   
Sbjct: 98  --AKRLDRESGKSSWDEFAKRSGASLVGSEERRN-------------RIIDRVEDPRGNY 157

Query: 145 MDNEEQKDDDIERRGSYEEVEDEETEAIADPRWDKIKSRFRGMVDERGATERPEFQRWNK 204
           +  EE+ ++++E        EDEE+E ++DPRWDKIKSRFRG+VD R   E+P+F+RWNK
Sbjct: 158 ISGEERVEENVEE-------EDEESEVVSDPRWDKIKSRFRGVVDARDRYEKPDFRRWNK 217

Query: 205 QESWGRKTWKEASESTLPKMIGEGVYGVGPVLAALSAGRREFYALYVQEGIDLNNNNKKK 264
           QE+WGR+TWKEA+ES++PK++GEGVYGVGPVLAALSAGRREFYALYVQEG+DL++NN+KK
Sbjct: 218 QENWGRRTWKEATESSVPKVVGEGVYGVGPVLAALSAGRREFYALYVQEGLDLSSNNRKK 277

Query: 265 KDKKGFEKVLKLAEKNALTIKEISKHDLNMISDNRPHQGLVLDASPLEMVKIKELDPVSL 324
           KDKKGFEKVLK+AEK  L+I E+SKHDLNM+ DNRPHQGLVLDASPLEMVKIKELDPVS+
Sbjct: 278 KDKKGFEKVLKMAEKLGLSINEVSKHDLNMVVDNRPHQGLVLDASPLEMVKIKELDPVSV 337

Query: 325 EDDKGSLWLALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELM 384
           E+DK SLW+ALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELM
Sbjct: 338 EEDKNSLWVALDEVTDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELM 397

Query: 385 ELRYCKNMMQFLTSSAENGWRVLGASVSSKSIDLKEVLPGAPTILVLGSEGTGLRPLVER 444
           ELRYCKNMMQFL SSAENGWRVLG SVSSK+I L E +PGAPTILVLGSEG GLRPLVER
Sbjct: 398 ELRYCKNMMQFLVSSAENGWRVLGGSVSSKAIPLNEAVPGAPTILVLGSEGMGLRPLVER 457

Query: 445 SCSQLVRIPGNIPVDVTIDTENDIETTD---GRSVDEFRSFMAVESLNVSVAAGVFVHHL 504
           SC+QLV+IP N+PVD+    E   ET +   G    EFRSF+AVESLNVSVAAGV +HHL
Sbjct: 458 SCTQLVKIPSNVPVDIIPGGEEHSETAEQNAGCLAGEFRSFLAVESLNVSVAAGVLLHHL 500

Query: 505 VG-NSYKNES 508
           +G N YKN++
Sbjct: 518 IGDNYYKNDT 500

The following BLAST results are available for this feature:

BLAST of Cucsa.288820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MRM1_DICDI	2.7e-35	32.30	rRNA methyltransferase 1, mitochondrial OS=Dictyostelium discoideum GN=mrm1 PE=3...	[more]
MRM1_SCHPO	2.6e-33	36.05	rRNA methyltransferase 1, mitochondrial OS=Schizosaccharomyces pombe (strain 972...	[more]
MRM1_HUMAN	1.2e-30	32.18	rRNA methyltransferase 1, mitochondrial OS=Homo sapiens GN=MRM1 PE=1 SV=1	[more]
MRM1_MOUSE	1.2e-30	33.22	rRNA methyltransferase 1, mitochondrial OS=Mus musculus GN=Mrm1 PE=2 SV=2	[more]
Y1447_MYCGI	1.3e-24	33.33	Uncharacterized tRNA/rRNA methyltransferase Mflv_1447 OS=Mycobacterium gilvum (s...	[more]

BLAST of Cucsa.288820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW97_CUCSA	2.7e-292	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G574920 PE=4 SV=1	[more]
A0A061GMB9_THECC	3.1e-171	65.18	TRNA/rRNA methyltransferase family protein OS=Theobroma cacao GN=TCM_037786 PE=4...	[more]
M5VUQ6_PRUPE	1.0e-169	61.45	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002880mg PE=4 SV=1	[more]
W9SEI1_9ROSA	1.2e-167	64.49	Mitochondrial rRNA methyltransferase OS=Morus notabilis GN=L484_007000 PE=4 SV=1	[more]
A0A0D2PIW6_GOSRA	1.2e-165	64.44	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G010100 PE=4 SV=1	[more]

BLAST of Cucsa.288820 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G19870.1	1.7e-139	52.80	tRNA/rRNA methyltransferase (SpoU) family protein	[more]
AT4G38020.1	1.2e-07	24.32	tRNA/rRNA methyltransferase (SpoU) family protein	[more]

BLAST of Cucsa.288820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449435780\|ref\|XP_004135672.1\|	3.9e-292	100.00	PREDICTED: uncharacterized protein LOC101220884 [Cucumis sativus]	[more]
gi\|659099797\|ref\|XP_008450781.1\|	9.4e-278	95.49	PREDICTED: uncharacterized protein LOC103492262 [Cucumis melo]	[more]
gi\|590576712\|ref\|XP_007013032.1\|	4.5e-171	65.18	TRNA/rRNA methyltransferase family protein [Theobroma cacao]	[more]
gi\|595813648\|ref\|XP_007203612.1\|	1.4e-169	61.45	hypothetical protein PRUPE_ppa002880mg [Prunus persica]	[more]
gi\|703154225\|ref\|XP_010110885.1\|	1.8e-167	64.49	Mitochondrial rRNA methyltransferase [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001537	SpoU_MeTrfase
IPR004441	rRNA_MeTrfase_TrmH
IPR013123	SpoU_subst-bd

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0008173	RNA methyltransferase activity
GO:0008168	methyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006396	RNA processing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001510	RNA methylation
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008173	RNA methyltransferase activity
molecular_function	GO:0008168	methyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.288820.1	Cucsa.288820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001537	tRNA/rRNA methyltransferase, SpoU type	PFAM	PF00588	SpoU_methylase	coord: 329..452 score: 1.1
IPR004441	RNA methyltransferase TrmH family	TIGRFAMs	TIGR00186	TIGR00186	coord: 255..498 score: 2.0
IPR013123	RNA 2-O ribose methyltransferase, substrate binding	PFAM	PF08032	SpoU_sub_bind	coord: 226..309 score: 2.9
IPR013123	RNA 2-O ribose methyltransferase, substrate binding	SMART	SM00967	SpoU_sub_bind_2	coord: 225..311 score: 4.
None	No IPR available	unknown	Coil	Coil	coord: 128..148 scor
None	No IPR available	PANTHER	PTHR12029	RNA METHYLTRANSFERASE	coord: 92..451 score: 1.0E-161coord: 479..499 score: 1.0E
None	No IPR available	PANTHER	PTHR12029:SF58	RRNA METHYLTRANSFERASE 1, MITOCHONDRIAL	coord: 92..451 score: 1.0E-161coord: 479..499 score: 1.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.288820	Cla011263	Watermelon (97103) v1	cgywmB531
Cucsa.288820	Csa1G574920	Cucumber (Chinese Long) v2	cgycuB414
Cucsa.288820	MELO3C015412	Melon (DHL92) v3.5.1	cgymeB481
Cucsa.288820	CSPI01G27530	Wild cucumber (PI 183967)	cgycpiB437
Cucsa.288820	Lsi06G002180	Bottle gourd (USVL1VR-Ls)	cgylsiB471
Cucsa.288820	MELO3C015412.2	Melon (DHL92) v3.6.1	cgymedB480
Cucsa.288820	CsaV3_1G039790	Cucumber (Chinese Long) v3	cgycucB446
Cucsa.288820	Bhi02G001631	Wax gourd	cgywgoB589

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.288820	Cucumber (Chinese Long) v3	cgycucB447
Cucsa.288820	Cucumber (Chinese Long) v3	cgycucB448
Cucsa.288820	Watermelon (97103) v2	cgywmbB505
Cucsa.288820	Watermelon (97103) v2	cgywmbB506
Cucsa.288820	Watermelon (97103) v2	cgywmbB507
Cucsa.288820	Wax gourd	cgywgoB588
Cucsa.288820	Cucumber (Gy14) v1	cgycgyB067
Cucsa.288820	Cucurbita maxima (Rimu)	cgycmaB0810
Cucsa.288820	Cucurbita maxima (Rimu)	cgycmaB0811
Cucsa.288820	Cucurbita maxima (Rimu)	cgycmaB0813
Cucsa.288820	Cucurbita maxima (Rimu)	cgycmaB0814
Cucsa.288820	Cucurbita moschata (Rifu)	cgycmoB0803
Cucsa.288820	Cucurbita moschata (Rifu)	cgycmoB0805
Cucsa.288820	Cucurbita moschata (Rifu)	cgycmoB0807
Cucsa.288820	Wild cucumber (PI 183967)	cgycpiB438
Cucsa.288820	Wild cucumber (PI 183967)	cgycpiB439
Cucsa.288820	Cucumber (Chinese Long) v2	cgycuB415
Cucsa.288820	Cucumber (Chinese Long) v2	cgycuB416
Cucsa.288820	Melon (DHL92) v3.5.1	cgymeB482
Cucsa.288820	Melon (DHL92) v3.5.1	cgymeB483
Cucsa.288820	Watermelon (Charleston Gray)	cgywcgB503
Cucsa.288820	Watermelon (Charleston Gray)	cgywcgB504
Cucsa.288820	Watermelon (Charleston Gray)	cgywcgB505
Cucsa.288820	Watermelon (Charleston Gray)	cgywcgB506
Cucsa.288820	Watermelon (97103) v1	cgywmB532
Cucsa.288820	Watermelon (97103) v1	cgywmB533
Cucsa.288820	Watermelon (97103) v1	cgywmB534
Cucsa.288820	Cucurbita pepo (Zucchini)	cgycpeB0765
Cucsa.288820	Cucurbita pepo (Zucchini)	cgycpeB0767
Cucsa.288820	Cucurbita pepo (Zucchini)	cgycpeB0768
Cucsa.288820	Cucurbita pepo (Zucchini)	cgycpeB0770
Cucsa.288820	Bottle gourd (USVL1VR-Ls)	cgylsiB470
Cucsa.288820	Bottle gourd (USVL1VR-Ls)	cgylsiB472
Cucsa.288820	Melon (DHL92) v3.6.1	cgymedB481
Cucsa.288820	Melon (DHL92) v3.6.1	cgymedB482
Cucsa.288820	Silver-seed gourd	carcgyB0043
Cucsa.288820	Silver-seed gourd	carcgyB0114
Cucsa.288820	Silver-seed gourd	carcgyB0646
Cucsa.288820	Silver-seed gourd	carcgyB1017