Cucsa.288630 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCCTCAGCGGCTTGTTATCGGAAGTTAAGCACCGGGAAGGTTCCGAAGCAATCAATCAGCCATGGGTGAGCAAAACCCCAGCTCTTGATTTCCTCACATTTGATCAGTTCTCTTTCTTGTGTCTATCGGTTCTTTCATCCGTATGAATCTGTTTGTGAATTGCGTGTATTCGTGCTTTTATCGATTTCAGGTAAAGTACACGGATCTCTGGCTCGTGCCGGTAAGGTGAGAGGTCAAACTCCAAAAGTAGCGAAGCAGGACAAGAAGAAGAAGCCCCGTGGACGTGCACACAAGCGGATGCAATACAATCGCAGATTCGTCACTGCAGGTAACATATTGTTTTGCAAATTATTTTGTTTATCAGATGTTTTACCGGTTTAGCATTGATGATTTTGGTTTAACATTGTATTCAATCACTATTCTGAGAAGTAAGTTAATTGGTTTATTTGTTAGCCTAGATGCAGTTCCTTACCAGAACAAATTTTTATTGCATTAGTAAGATTTTTGTATCAGAGTACGATAAGAATCATTCTGATGTGAGATTTAAATTTGTTTGATCTTTACAGTGGTTGGTTTTGGAAAGAAGAGAGGACCCAACTCCTCTGAGAAGTAAGCAAATAGAGCGACCTCATCGGGGGAGCTTTGCCGCTAGAGAGGCGTGGTTTTGTGCTTTACTATTAATCTTTTTCTTCCTATTTCTCATAGATGTTTTAGTTTATTGAGGTTTTTGGCTGTGTAAAAGATGTTTATTTTGACAATATATCAGAGTAATGTGATTTGGATCTGAATTTTGTCCTTAGTCCAACATTCTCTTTCTGAATTTTTATAGGT TCTCCTCAGCGGCTTGTTATCGGAAGTTAAGCACCGGGAAGGTTCCGAAGCAATCAATCAGCCATGGGTAAAGTACACGGATCTCTGGCTCGTGCCGGTAAGGTGAGAGGTCAAACTCCAAAAGTAGCGAAGCAGGACAAGAAGAAGAAGCCCCGTGGACGTGCACACAAGCGGATGCAATACAATCGCAGATTCGTCACTGCAGTGGTTGGTTTTGGAAAGAAGAGAGGACCCAACTCCTCTGAGAAGTAAGCAAATAGAGCGACCTCATCGGGGGAGCTTTGCCGCTAGAGAGGCGTGGTTTTGTGCTTTACTATTAATCTTTTTCTTCCTATTTCTCATAGATGTTTTAGTTTATTGAGGTTTTTGGCTGTGTAAAAGATGTTTATTTTGACAATATATCAGAGTAATGTGATTTGGATCTGAATTTTGTCCTTAGTCCAACATTCTCTTTCTGAATTTTTATAGGT ATGGGTAAAGTACACGGATCTCTGGCTCGTGCCGGTAAGGTGAGAGGTCAAACTCCAAAAGTAGCGAAGCAGGACAAGAAGAAGAAGCCCCGTGGACGTGCACACAAGCGGATGCAATACAATCGCAGATTCGTCACTGCAGTGGTTGGTTTTGGAAAGAAGAGAGGACCCAACTCCTCTGAGAAGTAA MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK*
BLAST of Cucsa.288630 vs. Swiss-Prot
Match: RS30_ARATH (40S ribosomal protein S30 OS=Arabidopsis thaliana GN=RPS30A PE=3 SV=3) HSP 1 Score: 125.6 bits (314), Expect = 2.0e-28 Identity = 60/62 (96.77%), Postives = 62/62 (100.00%), Query Frame = 1
BLAST of Cucsa.288630 vs. Swiss-Prot
Match: RS30_RAT (40S ribosomal protein S30 OS=Rattus norvegicus GN=Fau PE=1 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 9.8e-20 Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 1
BLAST of Cucsa.288630 vs. Swiss-Prot
Match: RS30_PONAB (40S ribosomal protein S30 OS=Pongo abelii GN=FAU PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 9.8e-20 Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 1
BLAST of Cucsa.288630 vs. Swiss-Prot
Match: RS30_PIG (40S ribosomal protein S30 OS=Sus scrofa GN=FAU PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 9.8e-20 Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 1
BLAST of Cucsa.288630 vs. Swiss-Prot
Match: RS30_BOVIN (40S ribosomal protein S30 OS=Bos taurus GN=FAU PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 9.8e-20 Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 1
BLAST of Cucsa.288630 vs. TrEMBL
Match: C6TEP1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G059600 PE=2 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 2.6e-27 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1
BLAST of Cucsa.288630 vs. TrEMBL
Match: A0A061GCX2_THECC (Ribosomal protein S30 family protein OS=Theobroma cacao GN=TCM_028966 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 2.6e-27 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1
BLAST of Cucsa.288630 vs. TrEMBL
Match: A0A0E0DXS3_9ORYZ (Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 2.6e-27 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1
BLAST of Cucsa.288630 vs. TrEMBL
Match: U5D4V4_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00036p00192320 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 2.6e-27 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1
BLAST of Cucsa.288630 vs. TrEMBL
Match: A0A0B2SEH7_GLYSO (Protein transport protein Sec16B OS=Glycine soja GN=glysoja_018940 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 2.6e-27 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1
BLAST of Cucsa.288630 vs. TAIR10
Match: AT2G19750.1 (AT2G19750.1 Ribosomal protein S30 family protein) HSP 1 Score: 125.6 bits (314), Expect = 1.1e-29 Identity = 60/62 (96.77%), Postives = 62/62 (100.00%), Query Frame = 1
BLAST of Cucsa.288630 vs. TAIR10
Match: AT4G29390.1 (AT4G29390.1 Ribosomal protein S30 family protein) HSP 1 Score: 125.6 bits (314), Expect = 1.1e-29 Identity = 60/62 (96.77%), Postives = 62/62 (100.00%), Query Frame = 1
BLAST of Cucsa.288630 vs. TAIR10
Match: AT5G56670.1 (AT5G56670.1 Ribosomal protein S30 family protein) HSP 1 Score: 125.6 bits (314), Expect = 1.1e-29 Identity = 60/62 (96.77%), Postives = 62/62 (100.00%), Query Frame = 1
BLAST of Cucsa.288630 vs. NCBI nr
Match: gi|944267741|gb|KQL31981.1| (hypothetical protein SETIT_019362mg, partial [Setaria italica]) HSP 1 Score: 128.6 bits (322), Expect = 3.7e-27 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1
BLAST of Cucsa.288630 vs. NCBI nr
Match: gi|641836965|gb|KDO55923.1| (hypothetical protein CISIN_1g042287mg, partial [Citrus sinensis]) HSP 1 Score: 128.6 bits (322), Expect = 3.7e-27 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1
BLAST of Cucsa.288630 vs. NCBI nr
Match: gi|226499664|ref|NP_001149323.1| (uncharacterized protein LOC100282946 [Zea mays]) HSP 1 Score: 128.6 bits (322), Expect = 3.7e-27 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1
BLAST of Cucsa.288630 vs. NCBI nr
Match: gi|297743124|emb|CBI35991.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 128.6 bits (322), Expect = 3.7e-27 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1
BLAST of Cucsa.288630 vs. NCBI nr
Match: gi|661881573|emb|CDP14733.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 128.6 bits (322), Expect = 3.7e-27 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |