Cucsa.281910 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.281910
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Ring finger protein, putative
Location	scaffold02641 : 78049 .. 79158 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCACCCTTCCCAATTCCTTCTCCCTCTTCTCTCTCTTTTTCCTCTTCACCGCCGTCTCTCCGGCAGCCCCcACCACCTACCACCGACCTCTAAACCTTATCCTAACCCACCCTTTAAaGGAAACTGTTTTtCTTGCTTCTTCTTCTTCTTCTCCTCCCCCACCACCTCTGTTTATTCCCTCTGCTCCACCCCCCGAGGAGAAGCCGGTCTACTCTCCATTCCGGCCGAGCATGGCGGTGGTGGTGGGTGTCCTGACCACCACTTTCTCCATTACTTTCCTTCTTCTTTTATACGCCAAGCACTGCAAGCGTGGGAATGCGGCGGTGGTGGTCGGTTACTCGATGCGTCCCAATACGATGATGGGTGTTCCGAGCTTCTCGACGAGGAAGAACTCTGGCATCGACCAGACTGTTATCGAATCGTTACCGATTTTCCGATTTGGGTCGTTGAGTGGACAGAAGGAAGGCCTGGAATGCGCTGTTTGTTTGAACAGATTCGAGCCGACGGAGGTTCTGAGACTTCTTCCGAAATGCAAACACGCTTTCCATGTTGAATGTGTCGATACTTGGCTCGACGCTCACTCCACTTGCCCTCTCTGTCGCTACAGAGTCGACCCGGAGGACGTGTTATTAGTTGAAGACGTCAATATCTTTCTTCACGACCAACCACCTCCACCACCTCAGCCGCCGCCGCCGCCACCACGGGAATCGAATTCCAAGGATGTAGTGTTGAACTTAGAACAGGGGAGAAGAAGCGGCAAGGCTGGATCCGGGAGAGTCTCCGGTAGACACTCGTCAGTGGGCGAGAAGAGAACAGGGGAGTCCAGTTACCGTGATCCAGCATTGTTGAGACGGTCACTCGACAGCAAGAGAACCGAAACGGTGTCTGTTGGGTGCTTCGATCGGCACCGAAAAGACGGGTTACTTTTGCCGGAGGAGAAAACAAATCAAAATCAGAATCAGAACAGATTGGAGCACAGGATCATAGTGTCGCCGAAGGTGCCGGTGGTGGAGAGATGGAGCGATGTCCAAGGTTCGGATCTGTTGTATCTACGGTCAGAAATGATAATATCCGACAGCCGGAGATTTTCAGTAGCTTCATTACCA

mRNA sequence

ATGGGCACCCTTCCCAATTCCTTCTCCCTCTTCTCTCTCTTTTTCCTCTTCACCGCCGTCTCTCCGGCAGCCCCCACCACCTACCACCGACCTCTAAACCTTATCCTAACCCACCCTTTAAAGGAAACTGTTTTTCTTGCTTCTTCTTCTTCTTCTCCTCCCCCACCACCTCTGTTTATTCCCTCTGCTCCACCCCCCGAGGAGAAGCCGGTCTACTCTCCATTCCGGCCGAGCATGGCGGTGGTGGTGGGTGTCCTGACCACCACTTTCTCCATTACTTTCCTTCTTCTTTTATACGCCAAGCACTGCAAGCGTGGGAATGCGGCGGTGGTGGTCGGTTACTCGATGCGTCCCAATACGATGATGGGTGTTCCGAGCTTCTCGACGAGGAAGAACTCTGGCATCGACCAGACTGTTATCGAATCGTTACCGATTTTCCGATTTGGGTCGTTGAGTGGACAGAAGGAAGGCCTGGAATGCGCTGTTTGTTTGAACAGATTCGAGCCGACGGAGGTTCTGAGACTTCTTCCGAAATGCAAACACGCTTTCCATGTTGAATGTGTCGATACTTGGCTCGACGCTCACTCCACTTGCCCTCTCTGTCGCTACAGAGTCGACCCGGAGGACGTGTTATTAGTTGAAGACGTCAATATCTTTCTTCACGACCAACCACCTCCACCACCTCAGCCGCCGCCGCCGCCACCACGGGAATCGAATTCCAAGGATGTAGTGTTGAACTTAGAACAGGGGAGAAGAAGCGGCAAGGCTGGATCCGGGAGAGTCTCCGGTAGACACTCGTCAGTGGGCGAGAAGAGAACAGGGGAGTCCAGTTACCGTGATCCAGCATTGTTGAGACGGTCACTCGACAGCAAGAGAACCGAAACGGTGTCTGTTGGGTGCTTCGATCGGCACCGAAAAGACGGGTTACTTTTGCCGGAGGAGAAAACAAATCAAAATCAGAATCAGAACAGATTGGAGCACAGGATCATAGTGTCGCCGAAGGTGCCGGTGGTGGAGAGATGGAGCGATGTCCAAGGTTCGGATCTGTTGTATCTACGGTCAGAAATGATAATATCCGACAGCCGGAGATTTTCAGTAGCTTCATTACCA

Coding sequence (CDS)

ATGGGCACCCTTCCCAATTCCTTCTCCCTCTTCTCTCTCTTTTTCCTCTTCACCGCCGTCTCTCCGGCAGCCCCcACCACCTACCACCGACCTCTAAACCTTATCCTAACCCACCCTTTAAaGGAAACTGTTTTtCTTGCTTCTTCTTCTTCTTCTCCTCCCCCACCACCTCTGTTTATTCCCTCTGCTCCACCCCCCGAGGAGAAGCCGGTCTACTCTCCATTCCGGCCGAGCATGGCGGTGGTGGTGGGTGTCCTGACCACCACTTTCTCCATTACTTTCCTTCTTCTTTTATACGCCAAGCACTGCAAGCGTGGGAATGCGGCGGTGGTGGTCGGTTACTCGATGCGTCCCAATACGATGATGGGTGTTCCGAGCTTCTCGACGAGGAAGAACTCTGGCATCGACCAGACTGTTATCGAATCGTTACCGATTTTCCGATTTGGGTCGTTGAGTGGACAGAAGGAAGGCCTGGAATGCGCTGTTTGTTTGAACAGATTCGAGCCGACGGAGGTTCTGAGACTTCTTCCGAAATGCAAACACGCTTTCCATGTTGAATGTGTCGATACTTGGCTCGACGCTCACTCCACTTGCCCTCTCTGTCGCTACAGAGTCGACCCGGAGGACGTGTTATTAGTTGAAGACGTCAATATCTTTCTTCACGACCAACCACCTCCACCACCTCAGCCGCCGCCGCCGCCACCACGGGAATCGAATTCCAAGGATGTAGTGTTGAACTTAGAACAGGGGAGAAGAAGCGGCAAGGCTGGATCCGGGAGAGTCTCCGGTAGACACTCGTCAGTGGGCGAGAAGAGAACAGGGGAGTCCAGTTACCGTGATCCAGCATTGTTGAGACGGTCACTCGACAGCAAGAGAACCGAAACGGTGTCTGTTGGGTGCTTCGATCGGCACCGAAAAGACGGGTTACTTTTGCCGGAGGAGAAAACAAATCAAAATCAGAATCAGAACAGATTGGAGCACAGGATCATAGTGTCGCCGAAGGTGCCGGTGGTGGAGAGATGGAGCGATGTCCAAGGTTCGGATCTGTTGTATCTACGGTCAGAAATGATAATATCCGACAGCCGGAGATTTTCAGTAGCTTCATTACCA

Protein sequence

MGTLPNSFSLFSLFFLFTAVSPAAPTTYHRPLNLILTHPLKETVFLASSSSSPPPPPLFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCKRGNAAVVVGYSMRPNTMMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNRFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHDQPPPPPQPPPPPPRESNSKDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRTGESSYRDPALLRRSLDSKRTETVSVGCFDRHRKDGLLLPEEKTNQNQNQNRLEHRIIVSPKVPVVERWSDVQGSDLLYLRSEMIISDSRRFSVASLP

Homology

[Close]

BLAST of Cucsa.281910 vs. Swiss-Prot
Match: ATL43_ARATH (RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2 SV=2)

HSP 1 Score: 300.8 bits (769), Expect = 2.0e-80
Identity = 184/362 (50.83%), Postives = 225/362 (62.15%), Query Frame = 1


Query: 32  LNLILTHPLKE--TVFLASSSSSPPPPPLFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTT 91
           L+L L   L +  T  + ++S +PPP P   P +PPP      S   P +AVV+ VLT  
Sbjct: 13  LSLFLNVSLADNHTAVVITTSDTPPPLP---PPSPPPRHN-FTSSLMPGIAVVIAVLTAF 72

Query: 92  FSITFLLLLYAKHCKRGNAAVVVGYSMR-PNTMMGVPSFST------RKNSGIDQTVIES 151
           FS+TFLLLLY KHCKR N +V V +  R   T  G   ++       RKNSGID++VIES
Sbjct: 73  FSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGGGVVGGRKNSGIDRSVIES 132

Query: 152 LPIFRFGSLSGQKEGLECAVCLNRFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCR 211
           LP+FRFG+LSG K+GLECAVCL RFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCR
Sbjct: 133 LPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCR 192

Query: 212 YRVDPEDVLLVEDVNIFLHDQPPPPPQPPPPPPRESNSKDVVLNLEQGRRSGKAGSGRVS 271
           YRVDPED+LL+ D N +   Q             ESNS    +N      +      R+S
Sbjct: 193 YRVDPEDILLIGDCNSWFELQFSKD---------ESNS----VNNNPPGLTRFIPVSRIS 252

Query: 272 GRHSSVGEK-------RTGESSYRDPALLRRSLDS---------KRTETVSVGCFDR-HR 331
           GRHSS GE+       RT  S   +P   RRSLDS         +++E+V+V C DR  R
Sbjct: 253 GRHSSAGERASRLNEIRTSSSYKSNPMSFRRSLDSSLKVNDAGEEKSESVAVNCLDRLQR 312

Query: 332 KDGLLLPEEKTNQNQNQNRLEHRIIVSPKVPVVERWSDVQGSDLLYLRSEMIISDSRRFS 368
           KDGLLL     N+   + R EHRII+S      +RWS+V+ SDLLYLRSEMI+SD R+ +
Sbjct: 313 KDGLLL---IPNRESFEGRFEHRIIISGGNRDDQRWSEVRPSDLLYLRSEMILSDCRKLA 354

[Close]

BLAST of Cucsa.281910 vs. Swiss-Prot
Match: ATL42_ARATH (E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42 PE=1 SV=2)

HSP 1 Score: 168.3 bits (425), Expect = 1.6e-40
Identity = 116/317 (36.59%), Postives = 171/317 (53.94%), Query Frame = 1


Query: 64  PPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCK---RGNAAVVVGYS--MRP 123
           PP     + + F PS+AVV GVL   F++TF+LL+YAK C    R  +     +   +R 
Sbjct: 22  PPFRNGDLVANFEPSLAVVTGVLAIMFALTFVLLVYAKCCHIDLRSGSGDRRRHDRRLRQ 81

Query: 124 NTMMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNRFEPTEVLRLLPK 183
                  + S+ + SG+D+T IESLP+FRF +L G K+GL+C+VCL++FE  E+LRLLPK
Sbjct: 82  GIFFNRSTASSDRFSGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPK 141

Query: 184 CKHAFHVECVDTWLDAHSTCPLCRYRVDPED---VLLVEDVNIFLHDQPPPPPQPPPPPP 243
           C+HAFH+ C+D WL+ H+TCPLCR RV  E+   VL   +   FL+              
Sbjct: 142 CRHAFHIGCIDQWLEQHATCPLCRDRVSMEEDSSVLTNGNSFRFLNQS----------EI 201

Query: 244 RESNSKDVVLNLEQG----RRSGKAGSGRVSGRHSSVGEKRTGESSYRDPALLRRSLDSK 303
           RE +S ++ +  E+      R   +GS R      S+GE      S+R            
Sbjct: 202 REDSSLELYIEREEEEERIHREELSGSSRF-----SIGE------SFR------------ 261

Query: 304 RTETVSVGCFDRHRKDGLLLPEEKTNQNQNQ--NRLEHRIIVSPKVPVVERWSDVQGSDL 363
             + + +G      K+  LL E   ++++ +  ++  HRI+VS  V    RWS+V  SDL
Sbjct: 262 --KILKLG-----NKEKTLLDEHVNDKDEKKLMHKFNHRIVVS-DVVFKNRWSNVSSSDL 297

Query: 364 LYLRSEMIIS-DSRRFS 366
           ++L SEM+ S  S RFS
Sbjct: 322 MFLNSEMVNSISSERFS 297

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BLAST of Cucsa.281910 vs. Swiss-Prot
Match: ATL12_ARATH (Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana GN=ATL12 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 8.9e-36
Identity = 77/167 (46.11%), Postives = 108/167 (64.67%), Query Frame = 1


Query: 49  SSSSPPPPPLFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAK--HCKRG 108
           S+ SPPPP L+  S            F+PS+A++ GV +  F++TF+LL+YAK  H    
Sbjct: 21  SAQSPPPPNLYATS----------DLFKPSLAIITGVFSIVFTLTFVLLVYAKCFHNDLR 80

Query: 109 NAAVVVGYSMRPNTMMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNR 168
           +     G  +R + +       + + SG+D+  IESLP FRF +L G K+GLEC+VCL++
Sbjct: 81  SETDSDGERIRHDRLWQGLFNRSSRFSGLDKKAIESLPFFRFSALKGLKQGLECSVCLSK 140

Query: 169 FEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLV 214
           FE  E+LRLLPKC+HAFH+ C+D WL+ H+TCPLCR RV+ ED L V
Sbjct: 141 FEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIEDDLSV 177

HSP 2 Score: 103.6 bits (257), Expect = 4.7e-21
Identity = 102/329 (31.00%), Postives = 148/329 (44.98%), Query Frame = 1


Query: 49  SSSSPPPPPLFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAK--HCKRG 108
           S+ SPPPP L+  S            F+PS+A++ GV +  F++TF+LL+YAK  H    
Sbjct: 21  SAQSPPPPNLYATS----------DLFKPSLAIITGVFSIVFTLTFVLLVYAKCFHNDLR 80

Query: 109 NAAVVVGYSMRPNTMMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNR 168
           +     G  +R + +       + + SG+D+  IESLP FRF +L G K+GLEC+VCL++
Sbjct: 81  SETDSDGERIRHDRLWQGLFNRSSRFSGLDKKAIESLPFFRFSALKGLKQGLECSVCLSK 140

Query: 169 FEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHDQPPP 228
           FE  E+LRL                       P CR+             +I   DQ   
Sbjct: 141 FEDVEILRL----------------------LPKCRHAF-----------HIGCIDQWLE 200

Query: 229 PPQPPPPPPRESNSKDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRTGESSYRDPALLRR 288
                P      N +D +  L         G+   S R  +  E R  +S        R 
Sbjct: 201 QHATCPLCRNRVNIEDDLSVL---------GNSSTSLRILNQSETREEDS--------RL 260

Query: 289 SLDSKRTETVSVGC-----FDRHRKDGLLLPEEKTNQNQNQNRL----EHRIIVSPKVPV 348
            +  +R E  + G      F +  K  LLL E + N+N ++ +L     HRI+VS  V  
Sbjct: 261 EIYIEREEGTNDGSSRFSSFRKILKKSLLL-EREGNENIDEKKLMHKFNHRIVVSDAV-F 287

Query: 349 VERWSDVQGSDLLYLRSEMIIS-DSRRFS 366
             RWS++  SDL +L SEM+ S  S RFS
Sbjct: 321 KNRWSNITSSDLTFLTSEMLNSVSSDRFS 287

[Close]

BLAST of Cucsa.281910 vs. Swiss-Prot
Match: ATL49_ARATH (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana GN=ATL49 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 3.5e-24
Identity = 69/173 (39.88%), Postives = 97/173 (56.07%), Query Frame = 1


Query: 32  LNLILTHPLKETVFLASSSSSPPPPPLFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFS 91
           +N IL   +K T  L SSS   PPPPL IP         + S   P++ +++ +L+  F 
Sbjct: 1   MNKILPE-MKSTQNLISSS---PPPPL-IPLKSNTSLSNLNSKITPNILLIIIILSIIFF 60

Query: 92  ITFLLLLYAKHCKRGNAAVVVGYSMRPNTMMG-VPSFSTRKNSGIDQTVIESLPIFRFGS 151
           I+ LL +  K     +      Y      + G +       +SG+DQ++I++LP+F + S
Sbjct: 61  ISGLLHILVKFLLTPSRESREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKS 120

Query: 152 LSGQK-EGLECAVCLNRFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCR 203
           + G K    +C VCL  FE  + LRLLPKC HAFHVEC+DTWL +HSTCPLCR
Sbjct: 121 IVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCR 168

[Close]

BLAST of Cucsa.281910 vs. Swiss-Prot
Match: ATL32_ARATH (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2 SV=3)

HSP 1 Score: 113.6 bits (283), Expect = 4.6e-24
Identity = 62/159 (38.99%), Postives = 82/159 (51.57%), Query Frame = 1


Query: 48  SSSSSPPPPPLFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCKRGN 107
           + S SP PP L              +   PS   V  VL T F +T LL +Y +HC R N
Sbjct: 28  AQSFSPSPPDL-------------QTGHTPSKTTVFAVLVTLFFLTGLLSVYIRHCARSN 87

Query: 108 AAVVVGYSM-RPNTMMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEG---LECAVC 167
                 Y   R N         + +  G+D  V+ES P+F + S+   K G   LECA+C
Sbjct: 88  PDSSTRYFRNRAND-------GSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAIC 147

Query: 168 LNRFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCR 203
           LN  E  E +RLLP C H FH++C+DTWL +H+TCP+CR
Sbjct: 148 LNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCR 166

[Close]

BLAST of Cucsa.281910 vs. TrEMBL
Match: A0A0A0M016_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G433100 PE=4 SV=1)

HSP 1 Score: 753.4 bits (1944), Expect = 1.3e-214
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 1


Query: 1   MGTLPNSFSLFSLFFLFTAVSPAAPTTYHRPLNLILTHPLKETVFLASSSSSPPPPPLFI 60
           MGTLPNSFSLFSLFFLFTAVSPAAPTTYHRPLNLILTHPLKETVFLASSSSSPPPPPLFI
Sbjct: 1   MGTLPNSFSLFSLFFLFTAVSPAAPTTYHRPLNLILTHPLKETVFLASSSSSPPPPPLFI 60

Query: 61  PSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCKRGNAAVVVGYSMRPNT 120
           PSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCKRGNAAVVVGYSMRPNT
Sbjct: 61  PSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCKRGNAAVVVGYSMRPNT 120

Query: 121 MMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNRFEPTEVLRLLPKCK 180
           MMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNRFEPTEVLRLLPKCK
Sbjct: 121 MMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNRFEPTEVLRLLPKCK 180

Query: 181 HAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHDQPPPPPQPPPPPPRESNS 240
           HAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHDQPPPPPQPPPPPPRESNS
Sbjct: 181 HAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHDQPPPPPQPPPPPPRESNS 240

Query: 241 KDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRTGESSYRDPALLRRSLDSKRTETVSVGC 300
           KDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRTGESSYRDPALLRRSLDSKRTETVSVGC
Sbjct: 241 KDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRTGESSYRDPALLRRSLDSKRTETVSVGC 300

Query: 301 FDRHRKDGLLLPEEKTNQNQNQNRLEHRIIVSPKVPVVERWSDVQGSDLLYLRSEMIISD 360
           FDRHRKDGLLLPEEKTNQNQNQNRLEHRIIVSPKVPVVERWSDVQGSDLLYLRSEMIISD
Sbjct: 301 FDRHRKDGLLLPEEKTNQNQNQNRLEHRIIVSPKVPVVERWSDVQGSDLLYLRSEMIISD 360

Query: 361 SRRFSVASLP 371
           SRRFSVASLP
Sbjct: 361 SRRFSVASLP 370

[Close]

BLAST of Cucsa.281910 vs. TrEMBL
Match: D7SQD9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00530 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.7e-92
Identity = 200/337 (59.35%), Postives = 226/337 (67.06%), Query Frame = 1


Query: 44  VFLASSSSSPPPPPLFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHC 103
           V  A+ S SPP PP  +P       +P +SPFRPS+AV+VGVLTT FSITFLLLLYAKHC
Sbjct: 28  VVAANPSQSPPLPPPALP-------RPNFSPFRPSIAVIVGVLTTMFSITFLLLLYAKHC 87

Query: 104 KRGNAAVVVGYSMRPNTMMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVC 163
           KRGN  V  G            S + RKNSGID+TVIESLP+FRF SL GQK+GLECAVC
Sbjct: 88  KRGNGVVYTGTPPL--------SSAARKNSGIDRTVIESLPVFRFASLRGQKDGLECAVC 147

Query: 164 LNRFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHDQ 223
           LNRFEPTE+LRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPED+LLVE+  I +   
Sbjct: 148 LNRFEPTEILRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLVEEPKISV--A 207

Query: 224 PPPPPQPP--PPPPRESNSKDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRTGESSY--- 283
           PPP P PP    P  E  + +V                RVSGRHSS GE+R+G       
Sbjct: 208 PPPEPDPPEVEKPDAEPRNPEV---------------RRVSGRHSSAGERRSGLVQIVLH 267

Query: 284 --RDPALLRRSLDS------KRTETVSVGCFDRHRKDGLLLPEEKTNQNQNQNRLEHRII 343
              +    RRSLDS      KR E V+VGCFDR RKD LLL  E  ++N  + RL+HRII
Sbjct: 268 KPDETTSSRRSLDSSSSSSRKRNEPVAVGCFDRPRKDELLLTSE--DRNSFERRLDHRII 327

Query: 344 VSP--KVPVVERWSDVQGSDLLYLRSEMIISDSRRFS 366
           VS        +RWSDVQ SDLLYLRSEMIISD+RR S
Sbjct: 328 VSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNRRLS 330

[Close]

BLAST of Cucsa.281910 vs. TrEMBL
Match: V4UJV7_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10010271mg PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.1e-88
Identity = 189/346 (54.62%), Postives = 229/346 (66.18%), Query Frame = 1


Query: 34  LILTHPLKETVFLASSSSSPPPPPLFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSIT 93
           +++T  L +     +++++   PP FI           +SPF+PSMAVVVGVLTT FS+T
Sbjct: 99  ILITPSLADNHDSRTTNNNSLCPPPFIQDKANANANKNFSPFKPSMAVVVGVLTTMFSMT 158

Query: 94  FLLLLYAKHCKRGNAAVVVGYSMRPNTMMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSG 153
           FLLLLYAKHCKRGN+  VVGY    + ++  PS + RKNSGID+TVIESLPIFRFG+L G
Sbjct: 159 FLLLLYAKHCKRGNS--VVGYGTSHSALIN-PSSTNRKNSGIDRTVIESLPIFRFGALRG 218

Query: 154 QKEGLECAVCLNRFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLV 213
            K+GLECAVCL RFEPTEVLRLLPKCKHAFHVECVDTWLD+HSTCPLCRYRVDPED+LL 
Sbjct: 219 HKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTCPLCRYRVDPEDILLS 278

Query: 214 EDVNIFLHDQPPPPPQPPPPPPRESNSKDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRT 273
            + NI   +    PP+P P  P                        RVSGRHSS GE   
Sbjct: 279 FEKNIDSAESEAAPPEPNPNHPE---------------------FRRVSGRHSSAGE--- 338

Query: 274 GESSYRDPALLRRSLDS------KRTETVSVGCFDRHRKDGLLLPEEKT-NQNQNQNRLE 333
             S  ++P   RRSLD       ++ E+V+VGCFDR RKDGLLL +  T ++  ++ R E
Sbjct: 339 FGSCSQNPTSSRRSLDGAFSKKREQAESVAVGCFDRPRKDGLLLTDGLTADRKSSERRFE 398

Query: 334 HRIIVSPKVPV----VERWSDVQGSDLLYLRSEMIISDSRRFSVAS 369
           HRII+S           RWSDVQ SDLLYLRSEM++SDSRRF+  S
Sbjct: 399 HRIIISAGAGAGGGFSRRWSDVQPSDLLYLRSEMLLSDSRRFASGS 417

[Close]

BLAST of Cucsa.281910 vs. TrEMBL
Match: M5XL88_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017787mg PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 2.2e-86
Identity = 189/328 (57.62%), Postives = 220/328 (67.07%), Query Frame = 1


Query: 46  LASSSSSPPPPPLFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCKR 105
           +AS+SSS P P      +PP  +    S FRPS+A++VGVLTT FSITFLLLLYAKHCKR
Sbjct: 13  IASTSSSNPSP------SPPNADPAKASSFRPSIAIIVGVLTTLFSITFLLLLYAKHCKR 72

Query: 106 GNAAVVVGYSMRPNTMMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLN 165
           G   V  G     N   G    + RKNSGID++V+ESLP+FRFGSL GQKEGLECAVCL 
Sbjct: 73  GALVVATG-----NANSGPSGSTQRKNSGIDRSVVESLPVFRFGSLRGQKEGLECAVCLT 132

Query: 166 RFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHDQPP 225
           RF+  EVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLV+D +  LH Q  
Sbjct: 133 RFDRAEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVDDASKILHSQ-- 192

Query: 226 PPPQPPPPPPRESNSKDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRTGESSYRDPAL-- 285
                         S DVVL++E        G  RVSGRHS  GE+R G     +P L  
Sbjct: 193 -------------QSSDVVLDIE-----NDPGYRRVSGRHSFAGEQRPG-----NPILTW 252

Query: 286 -LRRSLDS-----KRTETVSVGCFDRHRKDGLLLPEEKTNQNQNQNRLEHRIIVSPKVP- 345
             RRSLDS     K++E  +VGC DR RKDGLLL +++T       RLEHRII+SP +  
Sbjct: 253 SFRRSLDSWTAFRKKSEPSTVGCLDRPRKDGLLLGQDRT-------RLEHRIIISPGLAC 297

Query: 346 ----VVERWSDVQGSDLLYLRSEMIISD 361
               + +RWSDVQ SDLLYLRSEMI+S+
Sbjct: 313 GPGGLHQRWSDVQPSDLLYLRSEMIMSE 297

[Close]

BLAST of Cucsa.281910 vs. TrEMBL
Match: A0A067F3N8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016846mg PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.8e-83
Identity = 178/301 (59.14%), Postives = 207/301 (68.77%), Query Frame = 1


Query: 79  MAVVVGVLTTTFSITFLLLLYAKHCKRGNAAVVVGYSMRPNTMMGVPSFSTRKNSGIDQT 138
           MAVVVGVLTT FS+TFLLLLYAKHCKRGN+  VVGY    + ++  PS + RKNSGID+T
Sbjct: 1   MAVVVGVLTTMFSMTFLLLLYAKHCKRGNS--VVGYGTSHSALIN-PSSTNRKNSGIDRT 60

Query: 139 VIESLPIFRFGSLSGQKEGLECAVCLNRFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTC 198
           VIESLPIFRFG+L G K+GLECAVCL RFEPTEVLRLLPKCKHAFHVECVDTWLD+HSTC
Sbjct: 61  VIESLPIFRFGALRGHKDGLECAVCLTRFEPTEVLRLLPKCKHAFHVECVDTWLDSHSTC 120

Query: 199 PLCRYRVDPEDVLLVEDVNIFLHDQPPPPPQPPPPPPRESNSKDVVLNLEQGRRSGKAGS 258
           PLCRYRVDPED+LL  + NI   +    PP+P P  P                       
Sbjct: 121 PLCRYRVDPEDILLSFEKNIDSAESEAAPPEPNPNHPE---------------------F 180

Query: 259 GRVSGRHSSVGEKRTGESSYRDPALLRRSLDS------KRTETVSVGCFDRHRKDGLLLP 318
            RVSGRHSS GE     S  ++P   RRSLD       ++ E+V+VGCFDR RKDGLLL 
Sbjct: 181 RRVSGRHSSAGE---FGSCSQNPTSSRRSLDGAFSKKREQAESVAVGCFDRPRKDGLLLT 240

Query: 319 EEKT-NQNQNQNRLEHRIIVSPKVPV----VERWSDVQGSDLLYLRSEMIISDSRRFSVA 369
           +  T ++  ++ R EHRII+S           RWSDVQ SDLLYLRSEM++SDSRRF+  
Sbjct: 241 DGLTADRKSSERRFEHRIIISAGAGAGGGFSRRWSDVQPSDLLYLRSEMLLSDSRRFASG 274

[Close]

BLAST of Cucsa.281910 vs. TAIR10
Match: AT5G05810.1 (AT5G05810.1 RING/U-box superfamily protein)

HSP 1 Score: 286.2 bits (731), Expect = 2.9e-77
Identity = 169/315 (53.65%), Postives = 203/315 (64.44%), Query Frame = 1


Query: 77  PSMAVVVGVLTTTFSITFLLLLYAKHCKRGNAAVVVGYSMR-PNTMMGVPSFST------ 136
           P +AVV+ VLT  FS+TFLLLLY KHCKR N +V V +  R   T  G   ++       
Sbjct: 2   PGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGGGVVGG 61

Query: 137 RKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNRFEPTEVLRLLPKCKHAFHVECVD 196
           RKNSGID++VIESLP+FRFG+LSG K+GLECAVCL RFEPTEVLRLLPKCKHAFHVECVD
Sbjct: 62  RKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVD 121

Query: 197 TWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHDQPPPPPQPPPPPPRESNSKDVVLNLEQ 256
           TWLDAHSTCPLCRYRVDPED+LL+ D N +   Q             ESNS    +N   
Sbjct: 122 TWLDAHSTCPLCRYRVDPEDILLIGDCNSWFELQFSKD---------ESNS----VNNNP 181

Query: 257 GRRSGKAGSGRVSGRHSSVGEK-------RTGESSYRDPALLRRSLDS---------KRT 316
              +      R+SGRHSS GE+       RT  S   +P   RRSLDS         +++
Sbjct: 182 PGLTRFIPVSRISGRHSSAGERASRLNEIRTSSSYKSNPMSFRRSLDSSLKVNDAGEEKS 241

Query: 317 ETVSVGCFDR-HRKDGLLLPEEKTNQNQNQNRLEHRIIVSPKVPVVERWSDVQGSDLLYL 368
           E+V+V C DR  RKDGLLL     N+   + R EHRII+S      +RWS+V+ SDLLYL
Sbjct: 242 ESVAVNCLDRLQRKDGLLL---IPNRESFEGRFEHRIIISGGNRDDQRWSEVRPSDLLYL 300

[Close]

BLAST of Cucsa.281910 vs. TAIR10
Match: AT4G28890.1 (AT4G28890.1 RING/U-box superfamily protein)

HSP 1 Score: 168.3 bits (425), Expect = 8.8e-42
Identity = 116/317 (36.59%), Postives = 171/317 (53.94%), Query Frame = 1


Query: 64  PPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCK---RGNAAVVVGYS--MRP 123
           PP     + + F PS+AVV GVL   F++TF+LL+YAK C    R  +     +   +R 
Sbjct: 22  PPFRNGDLVANFEPSLAVVTGVLAIMFALTFVLLVYAKCCHIDLRSGSGDRRRHDRRLRQ 81

Query: 124 NTMMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNRFEPTEVLRLLPK 183
                  + S+ + SG+D+T IESLP+FRF +L G K+GL+C+VCL++FE  E+LRLLPK
Sbjct: 82  GIFFNRSTASSDRFSGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPK 141

Query: 184 CKHAFHVECVDTWLDAHSTCPLCRYRVDPED---VLLVEDVNIFLHDQPPPPPQPPPPPP 243
           C+HAFH+ C+D WL+ H+TCPLCR RV  E+   VL   +   FL+              
Sbjct: 142 CRHAFHIGCIDQWLEQHATCPLCRDRVSMEEDSSVLTNGNSFRFLNQS----------EI 201

Query: 244 RESNSKDVVLNLEQG----RRSGKAGSGRVSGRHSSVGEKRTGESSYRDPALLRRSLDSK 303
           RE +S ++ +  E+      R   +GS R      S+GE      S+R            
Sbjct: 202 REDSSLELYIEREEEEERIHREELSGSSRF-----SIGE------SFR------------ 261

Query: 304 RTETVSVGCFDRHRKDGLLLPEEKTNQNQNQ--NRLEHRIIVSPKVPVVERWSDVQGSDL 363
             + + +G      K+  LL E   ++++ +  ++  HRI+VS  V    RWS+V  SDL
Sbjct: 262 --KILKLG-----NKEKTLLDEHVNDKDEKKLMHKFNHRIVVS-DVVFKNRWSNVSSSDL 297

Query: 364 LYLRSEMIIS-DSRRFS 366
           ++L SEM+ S  S RFS
Sbjct: 322 MFLNSEMVNSISSERFS 297

[Close]

BLAST of Cucsa.281910 vs. TAIR10
Match: AT2G20030.1 (AT2G20030.1 RING/U-box superfamily protein)

HSP 1 Score: 152.5 bits (384), Expect = 5.0e-37
Identity = 77/167 (46.11%), Postives = 108/167 (64.67%), Query Frame = 1


Query: 49  SSSSPPPPPLFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAK--HCKRG 108
           S+ SPPPP L+  S            F+PS+A++ GV +  F++TF+LL+YAK  H    
Sbjct: 21  SAQSPPPPNLYATS----------DLFKPSLAIITGVFSIVFTLTFVLLVYAKCFHNDLR 80

Query: 109 NAAVVVGYSMRPNTMMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNR 168
           +     G  +R + +       + + SG+D+  IESLP FRF +L G K+GLEC+VCL++
Sbjct: 81  SETDSDGERIRHDRLWQGLFNRSSRFSGLDKKAIESLPFFRFSALKGLKQGLECSVCLSK 140

Query: 169 FEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLV 214
           FE  E+LRLLPKC+HAFH+ C+D WL+ H+TCPLCR RV+ ED L V
Sbjct: 141 FEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIEDDLSV 177

HSP 2 Score: 103.6 bits (257), Expect = 2.7e-22
Identity = 102/329 (31.00%), Postives = 148/329 (44.98%), Query Frame = 1


Query: 49  SSSSPPPPPLFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAK--HCKRG 108
           S+ SPPPP L+  S            F+PS+A++ GV +  F++TF+LL+YAK  H    
Sbjct: 21  SAQSPPPPNLYATS----------DLFKPSLAIITGVFSIVFTLTFVLLVYAKCFHNDLR 80

Query: 109 NAAVVVGYSMRPNTMMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNR 168
           +     G  +R + +       + + SG+D+  IESLP FRF +L G K+GLEC+VCL++
Sbjct: 81  SETDSDGERIRHDRLWQGLFNRSSRFSGLDKKAIESLPFFRFSALKGLKQGLECSVCLSK 140

Query: 169 FEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHDQPPP 228
           FE  E+LRL                       P CR+             +I   DQ   
Sbjct: 141 FEDVEILRL----------------------LPKCRHAF-----------HIGCIDQWLE 200

Query: 229 PPQPPPPPPRESNSKDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRTGESSYRDPALLRR 288
                P      N +D +  L         G+   S R  +  E R  +S        R 
Sbjct: 201 QHATCPLCRNRVNIEDDLSVL---------GNSSTSLRILNQSETREEDS--------RL 260

Query: 289 SLDSKRTETVSVGC-----FDRHRKDGLLLPEEKTNQNQNQNRL----EHRIIVSPKVPV 348
            +  +R E  + G      F +  K  LLL E + N+N ++ +L     HRI+VS  V  
Sbjct: 261 EIYIEREEGTNDGSSRFSSFRKILKKSLLL-EREGNENIDEKKLMHKFNHRIVVSDAV-F 287

Query: 349 VERWSDVQGSDLLYLRSEMIIS-DSRRFS 366
             RWS++  SDL +L SEM+ S  S RFS
Sbjct: 321 KNRWSNITSSDLTFLTSEMLNSVSSDRFS 287

[Close]

BLAST of Cucsa.281910 vs. TAIR10
Match: AT2G18650.1 (AT2G18650.1 RING/U-box superfamily protein)

HSP 1 Score: 114.0 bits (284), Expect = 2.0e-25
Identity = 69/173 (39.88%), Postives = 97/173 (56.07%), Query Frame = 1


Query: 32  LNLILTHPLKETVFLASSSSSPPPPPLFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFS 91
           +N IL   +K T  L SSS   PPPPL IP         + S   P++ +++ +L+  F 
Sbjct: 1   MNKILPE-MKSTQNLISSS---PPPPL-IPLKSNTSLSNLNSKITPNILLIIIILSIIFF 60

Query: 92  ITFLLLLYAKHCKRGNAAVVVGYSMRPNTMMG-VPSFSTRKNSGIDQTVIESLPIFRFGS 151
           I+ LL +  K     +      Y      + G +       +SG+DQ++I++LP+F + S
Sbjct: 61  ISGLLHILVKFLLTPSRESREDYFDNVTALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKS 120

Query: 152 LSGQK-EGLECAVCLNRFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCR 203
           + G K    +C VCL  FE  + LRLLPKC HAFHVEC+DTWL +HSTCPLCR
Sbjct: 121 IVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCR 168

[Close]

BLAST of Cucsa.281910 vs. TAIR10
Match: AT4G40070.1 (AT4G40070.1 RING/U-box superfamily protein)

HSP 1 Score: 113.6 bits (283), Expect = 2.6e-25
Identity = 62/159 (38.99%), Postives = 82/159 (51.57%), Query Frame = 1


Query: 48  SSSSSPPPPPLFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCKRGN 107
           + S SP PP L              +   PS   V  VL T F +T LL +Y +HC R N
Sbjct: 28  AQSFSPSPPDL-------------QTGHTPSKTTVFAVLVTLFFLTGLLSVYIRHCARSN 87

Query: 108 AAVVVGYSM-RPNTMMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEG---LECAVC 167
                 Y   R N         + +  G+D  V+ES P+F + S+   K G   LECA+C
Sbjct: 88  PDSSTRYFRNRAND-------GSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAIC 147

Query: 168 LNRFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCR 203
           LN  E  E +RLLP C H FH++C+DTWL +H+TCP+CR
Sbjct: 148 LNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCR 166

[Close]

BLAST of Cucsa.281910 vs. NCBI nr
Match: gi|778660887|ref|XP_004150747.2| (PREDICTED: RING-H2 finger protein ATL43 [Cucumis sativus])

HSP 1 Score: 753.4 bits (1944), Expect = 1.8e-214
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 1


Query: 1   MGTLPNSFSLFSLFFLFTAVSPAAPTTYHRPLNLILTHPLKETVFLASSSSSPPPPPLFI 60
           MGTLPNSFSLFSLFFLFTAVSPAAPTTYHRPLNLILTHPLKETVFLASSSSSPPPPPLFI
Sbjct: 1   MGTLPNSFSLFSLFFLFTAVSPAAPTTYHRPLNLILTHPLKETVFLASSSSSPPPPPLFI 60

Query: 61  PSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCKRGNAAVVVGYSMRPNT 120
           PSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCKRGNAAVVVGYSMRPNT
Sbjct: 61  PSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCKRGNAAVVVGYSMRPNT 120

Query: 121 MMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNRFEPTEVLRLLPKCK 180
           MMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNRFEPTEVLRLLPKCK
Sbjct: 121 MMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNRFEPTEVLRLLPKCK 180

Query: 181 HAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHDQPPPPPQPPPPPPRESNS 240
           HAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHDQPPPPPQPPPPPPRESNS
Sbjct: 181 HAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHDQPPPPPQPPPPPPRESNS 240

Query: 241 KDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRTGESSYRDPALLRRSLDSKRTETVSVGC 300
           KDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRTGESSYRDPALLRRSLDSKRTETVSVGC
Sbjct: 241 KDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRTGESSYRDPALLRRSLDSKRTETVSVGC 300

Query: 301 FDRHRKDGLLLPEEKTNQNQNQNRLEHRIIVSPKVPVVERWSDVQGSDLLYLRSEMIISD 360
           FDRHRKDGLLLPEEKTNQNQNQNRLEHRIIVSPKVPVVERWSDVQGSDLLYLRSEMIISD
Sbjct: 301 FDRHRKDGLLLPEEKTNQNQNQNRLEHRIIVSPKVPVVERWSDVQGSDLLYLRSEMIISD 360

Query: 361 SRRFSVASLP 371
           SRRFSVASLP
Sbjct: 361 SRRFSVASLP 370

[Close]

BLAST of Cucsa.281910 vs. NCBI nr
Match: gi|659107127|ref|XP_008453535.1| (PREDICTED: RING-H2 finger protein ATL43 [Cucumis melo])

HSP 1 Score: 699.9 bits (1805), Expect = 2.4e-198
Identity = 353/380 (92.89%), Postives = 358/380 (94.21%), Query Frame = 1


Query: 1   MGTLPNSFSLFSLFFLFTAVSPAAPTTYHRPLNLILTHPLKETVFLASSSSSP------- 60
           MGTLPNSFSLFSLFFLF AVSPAAPTT  R LNLILTH LKETVFLASSSSS        
Sbjct: 1   MGTLPNSFSLFSLFFLFIAVSPAAPTTDLRSLNLILTHHLKETVFLASSSSSSSSSSSSS 60

Query: 61  ---PPPPLFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCKRGNAAV 120
              PPPP FIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCKRGN AV
Sbjct: 61  SSSPPPPPFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHCKRGNGAV 120

Query: 121 VVGYSMRPNTMMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNRFEPT 180
           VVGYSMRPNT MGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNRFEPT
Sbjct: 121 VVGYSMRPNTTMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVCLNRFEPT 180

Query: 181 EVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHDQPPPPPQP 240
           EVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLH+QPPPP  P
Sbjct: 181 EVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHNQPPPP--P 240

Query: 241 PPPPPRESNSKDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRTGESSYRDPALLRRSLDS 300
           PPPPPRESNSKDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRTGESSYRDPALLRRSLDS
Sbjct: 241 PPPPPRESNSKDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRTGESSYRDPALLRRSLDS 300

Query: 301 KRTETVSVGCFDRHRKDGLLLPEEKTNQNQNQNRLEHRIIVSPKVPVVERWSDVQGSDLL 360
           KRTETVSVGCFDRHRKDG LLPEEK+NQNQNQNRLEHRIIVSP++PVVERWSDVQGSDLL
Sbjct: 301 KRTETVSVGCFDRHRKDGSLLPEEKSNQNQNQNRLEHRIIVSPRMPVVERWSDVQGSDLL 360

Query: 361 YLRSEMIISDSRRFSVASLP 371
           YLRSEMIISDSRR+SVASLP
Sbjct: 361 YLRSEMIISDSRRYSVASLP 378

[Close]

BLAST of Cucsa.281910 vs. NCBI nr
Match: gi|1009105853|ref|XP_015894853.1| (PREDICTED: RING-H2 finger protein ATL43 [Ziziphus jujuba])

HSP 1 Score: 381.7 bits (979), Expect = 1.4e-102
Identity = 217/360 (60.28%), Postives = 251/360 (69.72%), Query Frame = 1


Query: 44  VFLASSSSSPPPPPLFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHC 103
           + + S SSSPPPPP   P  PP   +  +SPFRPS+AV+VGVLTT FS+T LLLLYAKHC
Sbjct: 41  ISIPSPSSSPPPPPTLPPPPPPNLVRTKFSPFRPSIAVIVGVLTTMFSVTLLLLLYAKHC 100

Query: 104 KRGNAAVVVGYSMRP-NTMMG-----VPSFS-TRKNSGIDQTVIESLPIFRFGSLSGQKE 163
           KR +  +VVGY     N+ +G      PS S  RKNSGID++VIESLP+FRFGSL GQK+
Sbjct: 101 KRSDL-IVVGYGGHSLNSRVGGGSGVTPSSSYARKNSGIDRSVIESLPVFRFGSLMGQKD 160

Query: 164 GLECAVCLNRFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDV 223
           GLECAVCL RFE +EVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPED+LLVED 
Sbjct: 161 GLECAVCLTRFESSEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLVEDS 220

Query: 224 NIFLHDQ--PPPPPQPPPPPPRESNSKDVVLNLEQGRRSG------KAGSGRVSGRHSSV 283
            I   +Q     PP+PPPPP  E+ +   V ++E  R +G       +G  RVSGRHSS 
Sbjct: 221 KIVNQNQNHQLSPPEPPPPPLEEAEANGTVSDIESQRSAGGEWETANSGYRRVSGRHSSA 280

Query: 284 GE-----------KRTGESSYRDPA-LLRRSLDS------KRTETVSVGCFDRHRKDGLL 343
           GE           K  GES + D A   RRSLDS      K  E+V++GCFDR RKDGLL
Sbjct: 281 GEGGTGFLQVLVQKPGGESGHCDTASFYRRSLDSWSMQKKKSKESVAMGCFDRPRKDGLL 340

Query: 344 LPEEKTNQNQN-QNRLEHRIIVSPKVP-VVERWSDVQGSDLLYLRSEMIISDSRRFSVAS 369
           L EEKT  N + + R+EHRII+SP      +RWSDVQ SDLLYLRSEMIISDSRRFS  S
Sbjct: 341 LTEEKTRSNSSEERRVEHRIIISPGCSGFHQRWSDVQPSDLLYLRSEMIISDSRRFSGGS 399

[Close]

BLAST of Cucsa.281910 vs. NCBI nr
Match: gi|731408481|ref|XP_010656869.1| (PREDICTED: RING-H2 finger protein ATL43 [Vitis vinifera])

HSP 1 Score: 347.8 bits (891), Expect = 2.3e-92
Identity = 201/340 (59.12%), Postives = 227/340 (66.76%), Query Frame = 1


Query: 44  VFLASSSSSPPPPPLFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHC 103
           V  A+ S SPP PP  +P       +P +SPFRPS+AV+VGVLTT FSITFLLLLYAKHC
Sbjct: 28  VVAANPSQSPPLPPPALP-------RPNFSPFRPSIAVIVGVLTTMFSITFLLLLYAKHC 87

Query: 104 KRGNAAVVVGYSMRPNTMMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVC 163
           KRGN  V  G            S + RKNSGID+TVIESLP+FRF SL GQK+GLECAVC
Sbjct: 88  KRGNGVVYTGTPPL--------SSAARKNSGIDRTVIESLPVFRFASLRGQKDGLECAVC 147

Query: 164 LNRFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHDQ 223
           LNRFEPTE+LRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPED+LLVE+  I +   
Sbjct: 148 LNRFEPTEILRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLVEEPKISV--A 207

Query: 224 PPPPPQPP--PPPPRESNSKDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRTGESSY--- 283
           PPP P PP    P  E  + +V                RVSGRHSS GE+R+G       
Sbjct: 208 PPPEPDPPEVEKPDAEPRNPEV---------------RRVSGRHSSAGERRSGLVQIVLH 267

Query: 284 --RDPALLRRSLDS------KRTETVSVGCFDRHRKDGLLLPEEKTNQNQNQNRLEHRII 343
              +    RRSLDS      KR E V+VGCFDR RKD LLL  E  ++N  + RL+HRII
Sbjct: 268 KPDETTSSRRSLDSSSSSSRKRNEPVAVGCFDRPRKDELLLTSE--DRNSFERRLDHRII 327

Query: 344 VSP--KVPVVERWSDVQGSDLLYLRSEMIISDSRRFSVAS 369
           VS        +RWSDVQ SDLLYLRSEMIISD+RR S  S
Sbjct: 328 VSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNRRLSSVS 333

[Close]

BLAST of Cucsa.281910 vs. NCBI nr
Match: gi|297735430|emb|CBI17870.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 347.1 bits (889), Expect = 3.9e-92
Identity = 200/337 (59.35%), Postives = 226/337 (67.06%), Query Frame = 1


Query: 44  VFLASSSSSPPPPPLFIPSAPPPEEKPVYSPFRPSMAVVVGVLTTTFSITFLLLLYAKHC 103
           V  A+ S SPP PP  +P       +P +SPFRPS+AV+VGVLTT FSITFLLLLYAKHC
Sbjct: 28  VVAANPSQSPPLPPPALP-------RPNFSPFRPSIAVIVGVLTTMFSITFLLLLYAKHC 87

Query: 104 KRGNAAVVVGYSMRPNTMMGVPSFSTRKNSGIDQTVIESLPIFRFGSLSGQKEGLECAVC 163
           KRGN  V  G            S + RKNSGID+TVIESLP+FRF SL GQK+GLECAVC
Sbjct: 88  KRGNGVVYTGTPPL--------SSAARKNSGIDRTVIESLPVFRFASLRGQKDGLECAVC 147

Query: 164 LNRFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDVLLVEDVNIFLHDQ 223
           LNRFEPTE+LRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPED+LLVE+  I +   
Sbjct: 148 LNRFEPTEILRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLVEEPKISV--A 207

Query: 224 PPPPPQPP--PPPPRESNSKDVVLNLEQGRRSGKAGSGRVSGRHSSVGEKRTGESSY--- 283
           PPP P PP    P  E  + +V                RVSGRHSS GE+R+G       
Sbjct: 208 PPPEPDPPEVEKPDAEPRNPEV---------------RRVSGRHSSAGERRSGLVQIVLH 267

Query: 284 --RDPALLRRSLDS------KRTETVSVGCFDRHRKDGLLLPEEKTNQNQNQNRLEHRII 343
              +    RRSLDS      KR E V+VGCFDR RKD LLL  E  ++N  + RL+HRII
Sbjct: 268 KPDETTSSRRSLDSSSSSSRKRNEPVAVGCFDRPRKDELLLTSE--DRNSFERRLDHRII 327

Query: 344 VSP--KVPVVERWSDVQGSDLLYLRSEMIISDSRRFS 366
           VS        +RWSDVQ SDLLYLRSEMIISD+RR S
Sbjct: 328 VSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNRRLS 330

The following BLAST results are available for this feature:

BLAST of Cucsa.281910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATL43_ARATH	2.0e-80	50.83	RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2 SV=2	[more]
ATL42_ARATH	1.6e-40	36.59	E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42 PE=1 SV=2	[more]
ATL12_ARATH	8.9e-36	46.11	Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana GN=ATL12 PE=3 SV=1	[more]
ATL49_ARATH	3.5e-24	39.88	Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana GN=ATL49 PE=3 SV=1	[more]
ATL32_ARATH	4.6e-24	38.99	RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2 SV=3	[more]

BLAST of Cucsa.281910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M016_CUCSA	1.3e-214	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G433100 PE=4 SV=1	[more]
D7SQD9_VITVI	2.7e-92	59.35	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00530 PE=4 SV=...	[more]
V4UJV7_9ROSI	1.1e-88	54.62	Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10010271mg PE=...	[more]
M5XL88_PRUPE	2.2e-86	57.62	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017787mg PE=4 S...	[more]
A0A067F3N8_CITSI	1.8e-83	59.14	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016846mg PE=4 SV=1	[more]

BLAST of Cucsa.281910 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G05810.1	2.9e-77	53.65	RING/U-box superfamily protein	[more]
AT4G28890.1	8.8e-42	36.59	RING/U-box superfamily protein	[more]
AT2G20030.1	5.0e-37	46.11	RING/U-box superfamily protein	[more]
AT2G18650.1	2.0e-25	39.88	RING/U-box superfamily protein	[more]
AT4G40070.1	2.6e-25	38.99	RING/U-box superfamily protein	[more]

BLAST of Cucsa.281910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778660887\|ref\|XP_004150747.2\|	1.8e-214	100.00	PREDICTED: RING-H2 finger protein ATL43 [Cucumis sativus]	[more]
gi\|659107127\|ref\|XP_008453535.1\|	2.4e-198	92.89	PREDICTED: RING-H2 finger protein ATL43 [Cucumis melo]	[more]
gi\|1009105853\|ref\|XP_015894853.1\|	1.4e-102	60.28	PREDICTED: RING-H2 finger protein ATL43 [Ziziphus jujuba]	[more]
gi\|731408481\|ref\|XP_010656869.1\|	2.3e-92	59.12	PREDICTED: RING-H2 finger protein ATL43 [Vitis vinifera]	[more]
gi\|297735430\|emb\|CBI17870.3\|	3.9e-92	59.35	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.281910.1	Cucsa.281910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 159..202 score: 7.8
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 160..201 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 160..202 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 155..205 score: 4.6
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 46..236 score: 4.7
None	No IPR available	PANTHER	PTHR14155:SF78	RING-H2 FINGER PROTEIN ATL43	coord: 46..236 score: 4.7
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 140..207 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.281910	Cla018884	Watermelon (97103) v1	cgywmB517
Cucsa.281910	Csa1G433100	Cucumber (Chinese Long) v2	cgycuB401
Cucsa.281910	MELO3C017402	Melon (DHL92) v3.5.1	cgymeB471
Cucsa.281910	CSPI01G20810	Wild cucumber (PI 183967)	cgycpiB424
Cucsa.281910	CmaCh11G003400	Cucurbita maxima (Rimu)	cgycmaB0786
Cucsa.281910	CmoCh11G003430	Cucurbita moschata (Rifu)	cgycmoB0781
Cucsa.281910	Lsi06G012330	Bottle gourd (USVL1VR-Ls)	cgylsiB457
Cucsa.281910	Cp4.1LG04g13570	Cucurbita pepo (Zucchini)	cgycpeB0743
Cucsa.281910	CsaV3_1G032130	Cucumber (Chinese Long) v3	cgycucB432
Cucsa.281910	Bhi02G000145	Wax gourd	cgywgoB570
Cucsa.281910	Carg09073	Silver-seed gourd	carcgyB0675

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.281910	Cucurbita maxima (Rimu)	cgycmaB0785
Cucsa.281910	Cucurbita moschata (Rifu)	cgycmoB0780
Cucsa.281910	Watermelon (Charleston Gray)	cgywcgB488
Cucsa.281910	Cucurbita pepo (Zucchini)	cgycpeB0741
Cucsa.281910	Melon (DHL92) v3.6.1	cgymedB468
Cucsa.281910	Silver-seed gourd	carcgyB0900
Cucsa.281910	Watermelon (97103) v2	cgywmbB491