Cucsa.279480 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.279480
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Retrotransposon protein, putative, Ty3-gypsy subclass
Location	scaffold02622 : 70972 .. 73311 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGAGGTTCATGGAGCTTATGGATGCTATGGCTAACCAGCAGGCACCAGCTGTTCTGCCTACATCGTGGCCCCCTCTGTATCAGCAGCTCCATATACACTTGTGGCCCTCCCTGCACAGGGACTGGCTGCACAGCAGCCACATATACTACTAAATCAGCTTTCTGCCGAGGCGAAACACTTGAGAGACTTTAGGAAATATGACCCTCAGACTTTTGATGGATCACTGGAGGATCCTACCAAGGCAGAGTTGTGGTTGTCTTATGTGGAAACCATATTTAACTACATGAGGTGTCCGGAGGAGCATAGGGTTCAATGTGCTGCTTTTCTCTTCAGGGACAGAGGTATCATCTGGTGGAGGTCCACGATGCGTATGTTAGGTGGGAaTGTGAGACAGATTACTTGAGATCAGTTTAGAGACTGCTTTTATACCAAGTTTTtCTTGGCTAACCTTAGAGATGCTAAAAGCCAGGAATTCTTGGAATTGAAGCAATGACACATGGCAGTTGAGGAGTATGACCAAGAGTTCGACATGATGTTGCGCTTTGCCCCTGAGCTTGTTGGTAATGAGCAGACCATAGCTGAGAGGTTTGTTAAAGGATTGAGGGATGAGATCAGAGGCTTTGTGCGAGCACTAAAGCCCACCACTCAGGCTGAAGCACTACATCTAGCAGTGGATATGAGTATTGGAAAGGACGAAGTTCATGCAAAGAGTTCTGATAAGGGAACGTCGTCTGGCCAGAAAAGAAAAGTAGAGTAGAGGTTTTATGAAAGTTCCTCAGAGAAACTTGAGATCGGGTGGTCCTTTTCGCAGTTTCCAACAGAGTTCTGGTGGGGCAGGGGACACTACTAGAGAAGCCACTATGCAACACGTGTGGGAAGCGCCATCTGGGCCGTTGTTTGGTTGGAACCAGAGTTTGCTTCAAATGCAAGCAAGAGGGACACATGGTTGATCGTTGTCCCTTGAGATCTACTGAGACTTGACAGAGCAGTCAGGGAGTGAGAACTCCACAACGGGGTAAAGTTTTTGCCACTCGTAGATCAAAGGCAGAGAAGGCTGGCATAGTGGTGACAGGTACGCTACCAGTGTTAGGGCACTTTGCCTTAACTTTGTTTGACTCATGATCTTCTCATTCTTTTATTTCTTCGTTATTTGTAATACATGCATGCTTAGAGGTGGAGTTCTTAGACAATGTTTTATCAGTGTCAACACCGTCTGGGGAAATTATGTTGTCTAAGGAAAATGTCAAAGCATGTAAAATTGAAATAACTGGTCATGTGTTGGACGTAACTTTGTTAGTGTTGGGATATGTGTGACTTTGATGTAATCTTAGGCATGGATTGGTTAGTTGTTAATCATGCTAGCATGGATTCTTCTTGTAAGGAGGTAGTGTTCAGTCCTCCTACCGAGCCTAGTTTTAAATTCAAAGGGGTAGAAACAGTGGTACTACCTAAAGTGATTTCAGCTATGAAAGCTAGTAAACTGCTTAACCAGGGTACCTAAGTATTTTGGCCAGTGCGGTGGATACTCAGAACTTGTGGTAAGAGAATTCCCATATGTGTTTTCAGAAGAGATTCCAGGACTTACGCCTCACTGGGAGATTGATTTTGCCATTGAGTTGGAGCTAGACACTACTCTTATTTCTATAGCTCCTTATAGGATGCCTCCTGCTGAATTGAAAGAACCGAAGGTACATGAGTTGCTTGACAAAGATTTTATTCGACCTAGTGTGTCGCCTTGGGGTGCATCAGTACCGTTTGTGAAGAAGAAGGATGGGTCGATGCGTCTTTGCATTGACTATAGAGAGCTGTAACGATCAAGAACAGGTATCCTTTACCTAGAATCGATGATTTGTTTGATCAGTTACAAGGAGTCACTGTATTCTCTAAGATTGACTTGCGCTCAGGTTATCACCAGTTGAGGATTAGAGATAGTGATATTCCTAAGACTGCTTTTCGTTCGAGCTATGAACATTATGAATTCATTGTAATATCTTTTGGTTTGACCAATGCACCTATAGTATTTATGGATTTGATGAACAAGGTGTTTAAGAATTTCTTAGACACTTTTGTAATAGTATTGATATCTTGGTTTACTCCAAGAGAAAGACTGAACATGAGGAGCATTTACATAAAGTTTTAGAGACTCTTCGAGCCAATAAACTTTATGCTAAATTCTCAAAGTGCGAATTTTGGTTGAAGCAAGTGGCTTTCCTTGGTCATGTGGTATCTAGTGAGGGAGTTTATGTGGATCCTTTAAAGATTGAAGTTGTTACCAGTTGGTCTCGACCCTCTATAGTTAGTGAGGTCACTACTACAGAAATTGGTTACTTGAC

mRNA sequence

atggagaagaggttcatggagcttatggatgctatggctaaccagcaggcaccagctgttctgcctacatcgtggccccctctgaaatatgaccctcagacttttgatggatcactggaggatcctaccaaggcagagttgtggttgtcttatgtggaaaccatatttaactacatgaggtgtccggaggagcatagggttcaatgtgctgcttttctcttcagggacagaggtatcatctggtggaggtccacgatgcttgaggagtatgaccaagagttcgacatgatgttgcgctttgcccctgagcttgttggtaatgagcagaccatagctgagaggtttgttaaaggattgagggatgagatcagaggctttgtgcgagcactaaagcccaccactcaggctgaagcactacatctagcagtggatatgagtattggaaaggacgaagttcatgcaaagagttctgataagggaacgtcgtctggccagaaaagaaaatgttgggatatgtgtgactttgatgtaatcttaggcatggattggttagttgttaatcatgctagcatggattcttcttgtaaggaggtagtgttcagtcctcctaccgagcctaaacttgtggtaagagaattcccatatgtgttttcagaagagattccaggacttacgcctcactgggagattgattttgccattgagttggagctagacactactcttatttctatagctccttataggatgcctcctgctgaattgaaagaaccgaaggtacatgagttgcttgacaaagattttattcgacctagtgtgtcgccttggggtgcatcagtaccgtttgtgaagaagaaggatgggtcgatgcgtctttgcattgactatagagagctaatcgatgatttgtttgatcagttacaaggagtcactgtattctctaagattgacttgcgctcaggttatcaccagttgaggattagagatagtgatattcctaagactgcttttcgttcgagctatgaacattatgaattcattgtaatatcttttggtttgaccaatgcacctatagtatttatggatttgatgaacaaggtgtttaagaatttcttagacacttttgtaataactgaacatgaggagcatttacataaagttttagagactcttcgagccaataaactttatgctaaattctcaaagtgcgaattttggttgaagcaagtggctttccttggtcatgtggtatctagtgagggagtttatgtggatcctttaaagattgaagttgttaccagttggtctcgaccctctatagttagtgaggtCACTACTACAgaaattggttacttgac

Coding sequence (CDS)

ATGGAGAAGAGGTTCATGGAGCTTATGGATGCTATGGCTAACCAGCAGGCACCAGCTGTTCTGCCTACATCGTGGCCCCCTCTGAAATATGACCCTCAGACTTTTGATGGATCACTGGAGGATCCTACCAAGGCAGAGTTGTGGTTGTCTTATGTGGAAACCATATTTAACTACATGAGGTGTCCGGAGGAGCATAGGGTTCAATGTGCTGCTTTTCTCTTCAGGGACAGAGGTATCATCTGGTGGAGGTCCACGATGCTTGAGGAGTATGACCAAGAGTTCGACATGATGTTGCGCTTTGCCCCTGAGCTTGTTGGTAATGAGCAGACCATAGCTGAGAGGTTTGTTAAAGGATTGAGGGATGAGATCAGAGGCTTTGTGCGAGCACTAAAGCCCACCACTCAGGCTGAAGCACTACATCTAGCAGTGGATATGAGTATTGGAAAGGACGAAGTTCATGCAAAGAGTTCTGATAAGGGAACGTCGTCTGGCCAGAAAAGAAAATGTTGGGATATGTGTGACTTTGATGTAATCTTAGGCATGGATTGGTTAGTTGTTAATCATGCTAGCATGGATTCTTCTTGTAAGGAGGTAGTGTTCAGTCCTCCTACCGAGCCTAAACTTGTGGTAAGAGAATTCCCATATGTGTTTTCAGAAGAGATTCCAGGACTTACGCCTCACTGGGAGATTGATTTTGCCATTGAGTTGGAGCTAGACACTACTCTTATTTCTATAGCTCCTTATAGGATGCCTCCTGCTGAATTGAAAGAACCGAAGGTACATGAGTTGCTTGACAAAGATTTTATTCGACCTAGTGTGTCGCCTTGGGGTGCATCAGTACCGTTTGTGAAGAAGAAGGATGGGTCGATGCGTCTTTGCATTGACTATAGAGAGCTAATCGATGATTTGTTTGATCAGTTACAAGGAGTCACTGTATTCTCTAAGATTGACTTGCGCTCAGGTTATCACCAGTTGAGGATTAGAGATAGTGATATTCCTAAGACTGCTTTTCGTTCGAGCTATGAACATTATGAATTCATTGTAATATCTTTTGGTTTGACCAATGCACCTATAGTATTTATGGATTTGATGAACAAGGTGTTTAAGAATTTCTTAGACACTTTTGTAATAACTGAACATGAGGAGCATTTACATAAAGTTTTAGAGACTCTTCGAGCCAATAAACTTTATGCTAAATTCTCAAAGTGCGAATTTTGGTTGAAGCAAGTGGCTTTCCTTGGTCATGTGGTATCTAGTGAGGGAGTTTATGTGGATCCTTTAAAGATTGAAGTTGTTACCAGTTGGTCTCGACCCTCTATAGTTAGTGAGGTCACTACTACAGAAATTGGTTACTTGAC

Protein sequence

MEKRFMELMDAMANQQAPAVLPTSWPPLKYDPQTFDGSLEDPTKAELWLSYVETIFNYMRCPEEHRVQCAAFLFRDRGIIWWRSTMLEEYDQEFDMMLRFAPELVGNEQTIAERFVKGLRDEIRGFVRALKPTTQAEALHLAVDMSIGKDEVHAKSSDKGTSSGQKRKCWDMCDFDVILGMDWLVVNHASMDSSCKEVVFSPPTEPKLVVREFPYVFSEEIPGLTPHWEIDFAIELELDTTLISIAPYRMPPAELKEPKVHELLDKDFIRPSVSPWGASVPFVKKKDGSMRLCIDYRELIDDLFDQLQGVTVFSKIDLRSGYHQLRIRDSDIPKTAFRSSYEHYEFIVISFGLTNAPIVFMDLMNKVFKNFLDTFVITEHEEHLHKVLETLRANKLYAKFSKCEFWLKQVAFLGHVVSSEGVYVDPLKIEVVTSWSRPSIVSEVTTTEIGYLX

Homology

[Close]

BLAST of Cucsa.279480 vs. Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 1.6e-26
Identity = 85/283 (30.04%), Postives = 132/283 (46.64%), Query Frame = 1


Query: 187 NHASMDSSCKEVVFSPPTEPKLVVREFPYVFSEEIPGLTPHWEIDFAIELELDTTLISIA 246
           +H++ D+ C   V+      +++  + P       P    +  +   IE++    L  + 
Sbjct: 572 DHSNKDTFCTLPVWLQQKYREIIRNDLP-----PRPADINNIPVKHDIEIKPGARLPRLQ 631

Query: 247 PYRMPPAELKEPK--VHELLDKDFIRPSVSPWGASVPFVKKKDGSMRLCIDYREL----- 306
           PY +     +E    V +LLD  FI PS SP  + V  V KKDG+ RLC+DYR L     
Sbjct: 632 PYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATI 691

Query: 307 --------IDDLFDQLQGVTVFSKIDLRSGYHQLRIRDSDIPKTAFRSSYEHYEFIVISF 366
                   ID+L  ++    +F+ +DL SGYHQ+ +   D  KTAF +    YE+ V+ F
Sbjct: 692 SDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPF 751

Query: 367 GLTNAPIVFMDLMNKVFKN------FLDTFVI-----TEHEEHLHKVLETLRANKLYAKF 426
           GL NAP  F   M   F++      +LD  +I      EH +HL  VLE L+   L  K 
Sbjct: 752 GLVNAPSTFARYMADTFRDLRFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKK 811

Query: 427 SKCEFWLKQVAFLGHVVSSEGVYVDPLKIEVVTSWSRPSIVSE 444
            KC+F  ++  FLG+ +  + +     K   +  +  P  V +
Sbjct: 812 KKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQ 849

[Close]

BLAST of Cucsa.279480 vs. Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 122.1 bits (305), Expect = 1.6e-26
Identity = 85/283 (30.04%), Postives = 132/283 (46.64%), Query Frame = 1


Query: 187 NHASMDSSCKEVVFSPPTEPKLVVREFPYVFSEEIPGLTPHWEIDFAIELELDTTLISIA 246
           +H++ D+ C   V+      +++  + P       P    +  +   IE++    L  + 
Sbjct: 546 DHSNKDTFCTLPVWLQQKYREIIRNDLP-----PRPADINNIPVKHDIEIKPGARLPRLQ 605

Query: 247 PYRMPPAELKEPK--VHELLDKDFIRPSVSPWGASVPFVKKKDGSMRLCIDYREL----- 306
           PY +     +E    V +LLD  FI PS SP  + V  V KKDG+ RLC+DYR L     
Sbjct: 606 PYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATI 665

Query: 307 --------IDDLFDQLQGVTVFSKIDLRSGYHQLRIRDSDIPKTAFRSSYEHYEFIVISF 366
                   ID+L  ++    +F+ +DL SGYHQ+ +   D  KTAF +    YE+ V+ F
Sbjct: 666 SDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPF 725

Query: 367 GLTNAPIVFMDLMNKVFKN------FLDTFVI-----TEHEEHLHKVLETLRANKLYAKF 426
           GL NAP  F   M   F++      +LD  +I      EH +HL  VLE L+   L  K 
Sbjct: 726 GLVNAPSTFARYMADTFRDLRFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKK 785

Query: 427 SKCEFWLKQVAFLGHVVSSEGVYVDPLKIEVVTSWSRPSIVSE 444
            KC+F  ++  FLG+ +  + +     K   +  +  P  V +
Sbjct: 786 KKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQ 823

[Close]

BLAST of Cucsa.279480 vs. Swiss-Prot
Match: TF24_SCHPO (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.0e-25
Identity = 77/268 (28.73%), Postives = 137/268 (51.12%), Query Frame = 1


Query: 205 EPKL--VVREFPYVFSE----EIPGLTPHWEIDFAIELELDTTLISIAPYRMPPAELK-- 264
           EP+L  + +EF  + +E    ++P   P   ++F +EL  +   + I  Y +PP +++  
Sbjct: 371 EPELPDIYKEFKDITAETNTEKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAM 430

Query: 265 EPKVHELLDKDFIRPSVSPWGASVPFVKKKDGSMRLCIDYREL-------------IDDL 324
             ++++ L    IR S +     V FV KK+G++R+ +DY+ L             I+ L
Sbjct: 431 NDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQL 490

Query: 325 FDQLQGVTVFSKIDLRSGYHQLRIRDSDIPKTAFRSSYEHYEFIVISFGLTNAPIVFMDL 384
             ++QG T+F+K+DL+S YH +R+R  D  K AFR     +E++V+ +G++ AP  F   
Sbjct: 491 LAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYF 550

Query: 385 MNKVFKNFLDTFVI-------------TEHEEHLHKVLETLRANKLYAKFSKCEFWLKQV 439
           +N +     ++ V+             +EH +H+  VL+ L+   L    +KCEF   QV
Sbjct: 551 INTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQV 610

[Close]

BLAST of Cucsa.279480 vs. Swiss-Prot
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.0e-25
Identity = 77/268 (28.73%), Postives = 137/268 (51.12%), Query Frame = 1


Query: 205 EPKL--VVREFPYVFSE----EIPGLTPHWEIDFAIELELDTTLISIAPYRMPPAELK-- 264
           EP+L  + +EF  + +E    ++P   P   ++F +EL  +   + I  Y +PP +++  
Sbjct: 371 EPELPDIYKEFKDITAETNTEKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAM 430

Query: 265 EPKVHELLDKDFIRPSVSPWGASVPFVKKKDGSMRLCIDYREL-------------IDDL 324
             ++++ L    IR S +     V FV KK+G++R+ +DY+ L             I+ L
Sbjct: 431 NDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQL 490

Query: 325 FDQLQGVTVFSKIDLRSGYHQLRIRDSDIPKTAFRSSYEHYEFIVISFGLTNAPIVFMDL 384
             ++QG T+F+K+DL+S YH +R+R  D  K AFR     +E++V+ +G++ AP  F   
Sbjct: 491 LAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYF 550

Query: 385 MNKVFKNFLDTFVI-------------TEHEEHLHKVLETLRANKLYAKFSKCEFWLKQV 439
           +N +     ++ V+             +EH +H+  VL+ L+   L    +KCEF   QV
Sbjct: 551 INTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQV 610

[Close]

BLAST of Cucsa.279480 vs. Swiss-Prot
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.0e-25
Identity = 77/268 (28.73%), Postives = 137/268 (51.12%), Query Frame = 1


Query: 205 EPKL--VVREFPYVFSE----EIPGLTPHWEIDFAIELELDTTLISIAPYRMPPAELK-- 264
           EP+L  + +EF  + +E    ++P   P   ++F +EL  +   + I  Y +PP +++  
Sbjct: 371 EPELPDIYKEFKDITAETNTEKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAM 430

Query: 265 EPKVHELLDKDFIRPSVSPWGASVPFVKKKDGSMRLCIDYREL-------------IDDL 324
             ++++ L    IR S +     V FV KK+G++R+ +DY+ L             I+ L
Sbjct: 431 NDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQL 490

Query: 325 FDQLQGVTVFSKIDLRSGYHQLRIRDSDIPKTAFRSSYEHYEFIVISFGLTNAPIVFMDL 384
             ++QG T+F+K+DL+S YH +R+R  D  K AFR     +E++V+ +G++ AP  F   
Sbjct: 491 LAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYF 550

Query: 385 MNKVFKNFLDTFVI-------------TEHEEHLHKVLETLRANKLYAKFSKCEFWLKQV 439
           +N +     ++ V+             +EH +H+  VL+ L+   L    +KCEF   QV
Sbjct: 551 INTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQV 610

[Close]

BLAST of Cucsa.279480 vs. TrEMBL
Match: A0A061FHZ8_THECC (DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_033345 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 2.2e-91
Identity = 186/302 (61.59%), Postives = 213/302 (70.53%), Query Frame = 1


Query: 171 DMCDFDVILGMDWLVVNHASMDSSCKEVVFSPPTEPKLVVREFPYVFSEEIPGLTPHWEI 230
           D  DFDVILGMDWL   HAS+D   K V     T+   VV+EF  VF EE+PGL P  EI
Sbjct: 568 DTLDFDVILGMDWLSPCHASVDCYHKLVKIGDVTQVS-VVKEFVDVFPEELPGLPPEREI 627

Query: 231 DFAIELELDTTLISIAPYRMPPAELKEPK--VHELLDKDFIRPSVSPWGASVPFVKKKDG 290
           +F I+L  DT  ISI PYRM PAELKE K  + +LLDK FIRPSVSPWGA V FVKKKDG
Sbjct: 628 EFCIDLIPDTRPISIPPYRMAPAELKELKDQLEDLLDKGFIRPSVSPWGAPVLFVKKKDG 687

Query: 291 SMRLCIDYREL-------------IDDLFDQLQGVTVFSKIDLRSGYHQLRIRDSDIPKT 350
           S+RLCIDYR+L             IDDLFDQLQG   FSKIDLRSGYHQLRIR+ DIPK 
Sbjct: 688 SLRLCIDYRQLNKVTVKNKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRIRNEDIPKI 747

Query: 351 AFRSSYEHYEFIVISFGLTNAPIVFMDLMNKVFKNFLDTFVIT-------------EHEE 410
           AF++ Y HYEF+V+SFGLTNAP  FMDLMN+VFK +LD FV+              EHE+
Sbjct: 748 AFQTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDKFVVVFIDDILIYSKSREEHEQ 807

Query: 411 HLHKVLETLRANKLYAKFSKCEFWLKQVAFLGHVVSSEGVYVDPLKIEVVTSWSRPSIVS 445
           HL  VL+ LR ++LYAKFSKCEFWL+ VAFLGHVVS EG+ VD  KIE V  W RP+ V+
Sbjct: 808 HLKIVLQILREHRLYAKFSKCEFWLESVAFLGHVVSKEGIQVDTKKIEAVEKWPRPTSVT 867

[Close]

BLAST of Cucsa.279480 vs. TrEMBL
Match: A0A061FHZ8_THECC (DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_033345 PE=4 SV=1)

HSP 1 Score: 38.9 bits (89), Expect = 2.0e+01
Identity = 24/83 (28.92%), Postives = 41/83 (49.40%), Query Frame = 1


Query: 84  STMLEEYDQEFDMMLRFAPELVGNEQTIAERFVKGLRDEIRGFVRALKPTTQAEALHLA- 143
           S  + EYD +F  + R+AP LV  E+   +RFV GL + +   V +   TT + A+  A 
Sbjct: 236 SMTVSEYDIKFTQLARYAPYLVSTEEMKIQRFVDGLVESLFRAVASRDFTTYSAAVDRAQ 295

Query: 144 -VDMSIGKDEVHAKSSDKGTSSG 165
            ++M   +       + +G + G
Sbjct: 296 RIEMRTSESRAARDRAKRGKTEG 318

HSP 2 Score: 329.3 bits (843), Expect = 7.2e-87
Identity = 172/326 (52.76%), Postives = 215/326 (65.95%), Query Frame = 1


Query: 172 MCDFDVILGMDWLVVNHASMDSSCKEVVFSPPTEPKL----------------------- 231
           M D DVIL MDWL  + AS++   KEVVFS P  P++                       
Sbjct: 410 MVDLDVILWMDWLAKHCASVNCFRKEVVFSSPRRPEVTFYVEPMTAKQLLIKWCSGYIAH 469

Query: 232 ---------------VVREFPYVFSEEIPGLTPHWEIDFAIELELDTTLISIAPYRMPPA 291
                          +V+EFP VF E++PGL PH EI+F I+L      IS APYRM PA
Sbjct: 470 VINTRDNRLRLEDIPIVQEFPNVFPEDLPGLPPHREIEFIIKLAPGMNPISQAPYRMAPA 529

Query: 292 ELKEPKVH--ELLDKDFIRPSVSPWGASVPFVKKKDGSMRLCIDYREL------------ 351
           EL+E K+   EL+DK FIRPS SPWG    FVKKKDG+MRLCIDYR+L            
Sbjct: 530 ELRELKIQLQELVDKGFIRPSFSPWGPPALFVKKKDGTMRLCIDYRQLNKVTVRNRYPLP 589

Query: 352 -IDDLFDQLQGVTVFSKIDLRSGYHQLRIRDSDIPKTAFRSSYEHYEFIVISFGLTNAPI 411
            +DDLFDQL+G  +FSKIDLRSGYHQLR+R+ D+PKT FR+ YEHYEF+V+ FGLTN P 
Sbjct: 590 RVDDLFDQLKGAKIFSKIDLRSGYHQLRVREEDVPKTIFRTRYEHYEFLVMPFGLTNVPA 649

Query: 412 VFMDLMNKVFKNFLDTFVITEHEEHLHKVLETLRANKLYAKFSKCEFWLKQVAFLGHVVS 445
            F+DL+N+VF+ +LD FVI  H +HLH VL+TLR  +L AKFSKC+FWL +V+FLGHV+S
Sbjct: 650 AFVDLINRVFRCYLDRFVIKAHMKHLHIVLKTLRRRQLNAKFSKCQFWLDRVSFLGHVIS 709

[Close]

BLAST of Cucsa.279480 vs. TrEMBL
Match: E5GC03_CUCME (Ty3-gypsy retrotransposon protein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 3.0e-85
Identity = 181/289 (62.63%), Postives = 200/289 (69.20%), Query Frame = 1


Query: 171 DMCDFDVILGMDWLVVNHASMDSSCKEVVFSPPTEPKLVVREFPYVFSEEIPGLTPHWE- 230
           DM DFDVILGMDWL  NHAS+D S KEV F+PP        +F    S  +P +      
Sbjct: 27  DMHDFDVILGMDWLAANHASIDCSRKEVTFNPPLMANF---KFKGEGSRSLPKVISAMRA 86

Query: 231 ----IDFAIELELDTTLISIAPYRMPPAELKEPKVH--ELLDKDFIRPSVSPWGASVPFV 290
               + F+IELE  T  I  AP  M PAELKE KV   ELLDK FIRPSVSP G  V FV
Sbjct: 87  RNCLVGFSIELEPGTVPIFRAPNIMAPAELKELKVQLQELLDKGFIRPSVSPSGVPVLFV 146

Query: 291 KKKDGSMRLCIDYREL-------------IDDLFDQLQGVTVFSKIDLRSGYHQLRIRDS 350
           KKKDGSMRLCIDYREL             IDDLFDQLQG TVFSKIDLRSGYHQLRI+DS
Sbjct: 147 KKKDGSMRLCIDYRELNKVTVQNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDS 206

Query: 351 DIPKTAFRSSYEHYEFIVISFGLTNAPIVFMDLMNKVFKNFLDTFVI------------- 410
           D+PK  FRS Y HYEFI++SFGLTNAPIVFMDLMN+VF+  LDTFVI             
Sbjct: 207 DVPKITFRSRYGHYEFIIMSFGLTNAPIVFMDLMNRVFRELLDTFVIVFIDDILIYSKTE 266

Query: 411 TEHEEHLHKVLETLRANKLYAKFSKCEFWLKQVAFLGHVVSSEGVYVDP 427
            EH+EHL  VLETLRAN+L+AKFSKCEFWLKQV+FLGHVVS  G+ +DP
Sbjct: 267 AEHKEHLRMVLETLRANELFAKFSKCEFWLKQVSFLGHVVSKAGISMDP 312

[Close]

BLAST of Cucsa.279480 vs. TrEMBL
Match: Q6L3M7_SOLDE (Gag-pol protein, putative OS=Solanum demissum GN=SDM1_27t00008 PE=4 SV=2)

HSP 1 Score: 319.7 bits (818), Expect = 5.7e-84
Identity = 163/264 (61.74%), Postives = 195/264 (73.86%), Query Frame = 1


Query: 209 VVREFPYVFSEEIPGLTPHWEIDFAIELELDTTLISIAPYRMPPAELKEPK--VHELLDK 268
           +VREFP VF +++PG+ P  EIDF I+L  DT  ISI PYRM P+ELKE K  + +LLDK
Sbjct: 710 IVREFPKVFPDDLPGIPPEREIDFGIDLIPDTHPISIPPYRMAPSELKELKEQLKDLLDK 769

Query: 269 DFIRPSVSPWGASVPFVKKKDGSMRLCIDYREL-------------IDDLFDQLQGVTVF 328
            FIRPSVSPWGA V FV+KKDGS+R+CIDYR+L             IDDLF+QLQG T F
Sbjct: 770 GFIRPSVSPWGAPVLFVRKKDGSLRMCIDYRQLNKVTIKNKYPLPRIDDLFNQLQGATCF 829

Query: 329 SKIDLRSGYHQLRIRDSDIPKTAFRSSYEHYEFIVISFGLTNAPIVFMDLMNKVFKNFLD 388
           SKIDLRSGYHQLR+R+ DIPKTAFR+ Y HYEF+V+SFGLTNAP  FMDLMN+VFK +LD
Sbjct: 830 SKIDLRSGYHQLRVRECDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLD 889

Query: 389 TFVIT-------------EHEEHLHKVLETLRANKLYAKFSKCEFWLKQVAFLGHVVSSE 445
           TFVI              +H  HL  VL+TL+ NKLYAKFSKCEFWLK VAFLGH+VS +
Sbjct: 890 TFVIVFIDDILVYSRNEEDHASHLRTVLQTLKDNKLYAKFSKCEFWLKSVAFLGHIVSGD 949

[Close]

BLAST of Cucsa.279480 vs. TrEMBL
Match: Q6L3M7_SOLDE (Gag-pol protein, putative OS=Solanum demissum GN=SDM1_27t00008 PE=4 SV=2)

HSP 1 Score: 42.7 bits (99), Expect = 1.4e+00
Identity = 20/36 (55.56%), Postives = 24/36 (66.67%), Query Frame = 1


Query: 171 DMCDFDVILGMDWLVVNHASMDSSCKEVVFSPPTEP 207
           DM DFDVILGM+WL   +AS+D   + V F  P EP
Sbjct: 624 DMVDFDVILGMNWLHACYASLDCRTRVVKFQFPNEP 659

HSP 2 Score: 319.3 bits (817), Expect = 7.5e-84
Identity = 168/264 (63.64%), Postives = 192/264 (72.73%), Query Frame = 1


Query: 209 VVREFPYVFSEEIPGLTPHWEIDFAIELELDTTLISIAPYRMPPAELKEPK--VHELLDK 268
           VV+EF  VF EE+P L P  E++F I+L  DT  ISI PYRM PAELKE K  + +LLDK
Sbjct: 513 VVKEFVDVFPEELPSLPPEREVEFCIDLIPDTRPISIPPYRMAPAELKELKDQLEDLLDK 572

Query: 269 DFIRPSVSPWGASVPFVKKKDGSMRLCIDYREL-------------IDDLFDQLQGVTVF 328
            FIRPSVSPWGA V FVKKKDGS+RLCIDYR+L             IDDLFDQLQG   F
Sbjct: 573 GFIRPSVSPWGAPVLFVKKKDGSLRLCIDYRQLNKVTVKNKYPLPRIDDLFDQLQGAQCF 632

Query: 329 SKIDLRSGYHQLRIRDSDIPKTAFRSSYEHYEFIVISFGLTNAPIVFMDLMNKVFKNFLD 388
           SKIDLRSGYHQLRIR+ DIPKTAFR+ Y HYEF+V+SFGLTNAP  FMDLMN+VFK +LD
Sbjct: 633 SKIDLRSGYHQLRIRNEDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLD 692

Query: 389 TFVIT-------------EHEEHLHKVLETLRANKLYAKFSKCEFWLKQVAFLGHVVSSE 445
            FV+              EHE+HL  VL+ LR ++LYAKFSKCEFWL+ VAFLGHVVS E
Sbjct: 693 KFVVVFIDDILIYSKSREEHEQHLKIVLQILREHRLYAKFSKCEFWLESVAFLGHVVSKE 752

[Close]

BLAST of Cucsa.279480 vs. NCBI nr
Match: gi|702455653|ref|XP_010026793.1| (PREDICTED: uncharacterized protein LOC104417177 [Eucalyptus grandis])

HSP 1 Score: 347.1 bits (889), Expect = 4.8e-92
Identity = 184/301 (61.13%), Postives = 214/301 (71.10%), Query Frame = 1


Query: 172 MCDFDVILGMDWLVVNHASMDSSCKEVVFSPPTEPKLVVREFPYVFSEEIPGLTPHWEID 231
           M DFDVI+GMDWL    A MD   K + F+P  E   VVREFP VF +E+PGL P  EI+
Sbjct: 498 MYDFDVIIGMDWLTKQRAKMDCYRKAIQFNP-LEDIAVVREFPDVFPKELPGLPPEREIE 557

Query: 232 FAIELELDTTLISIAPYRMPPAELKEPKVH--ELLDKDFIRPSVSPWGASVPFVKKKDGS 291
           F IEL   T  IS APYRM  +ELKE KV   ELLDK FIRPS SPWGA V FVKKKDGS
Sbjct: 558 FVIELAPGTEPISKAPYRMALSELKELKVQMQELLDKGFIRPSASPWGAPVLFVKKKDGS 617

Query: 292 MRLCIDYREL-------------IDDLFDQLQGVTVFSKIDLRSGYHQLRIRDSDIPKTA 351
           +RLCIDYR+L             IDDLFDQLQG ++FSKIDLR+GYHQLRI+  DIPK+A
Sbjct: 618 LRLCIDYRQLNQVTIKNKYPLPRIDDLFDQLQGASIFSKIDLRTGYHQLRIKKEDIPKSA 677

Query: 352 FRSSYEHYEFIVISFGLTNAPIVFMDLMNKVFKNFLDTFVIT-------------EHEEH 411
           FR+ Y HYEF V+ FGLTNAP  FMDLMN+VFK +LD FVI              +HE+H
Sbjct: 678 FRTRYGHYEFTVMPFGLTNAPAAFMDLMNRVFKEYLDQFVIVFIDDILVYSRSSEDHEKH 737

Query: 412 LHKVLETLRANKLYAKFSKCEFWLKQVAFLGHVVSSEGVYVDPLKIEVVTSWSRPSIVSE 445
           L  VL+TLR ++LYAKFSKCEFWL +VAFLGHV+S EG+ VDP KIE V +W RP+ V+E
Sbjct: 738 LRIVLQTLRDHELYAKFSKCEFWLTRVAFLGHVISGEGISVDPAKIEAVINWPRPTTVTE 797

[Close]

BLAST of Cucsa.279480 vs. NCBI nr
Match: gi|702455653|ref|XP_010026793.1| (PREDICTED: uncharacterized protein LOC104417177 [Eucalyptus grandis])

HSP 1 Score: 34.3 bits (77), Expect = 6.9e+02
Identity = 15/41 (36.59%), Postives = 25/41 (60.98%), Query Frame = 1


Query: 87  LEEYDQEFDMMLRFAPELVGNEQTIAERFVKGLRDEIRGFV 128
           +++Y+ +F  + ++APELV        RF  GLR E+R F+
Sbjct: 245 VDQYEAKFAELSQYAPELVQKPADRIRRFRDGLRSEVRSFL 285

HSP 2 Score: 344.4 bits (882), Expect = 3.1e-91
Identity = 186/302 (61.59%), Postives = 213/302 (70.53%), Query Frame = 1


Query: 171 DMCDFDVILGMDWLVVNHASMDSSCKEVVFSPPTEPKLVVREFPYVFSEEIPGLTPHWEI 230
           D  DFDVILGMDWL   HAS+D   K V     T+   VV+EF  VF EE+PGL P  EI
Sbjct: 568 DTLDFDVILGMDWLSPCHASVDCYHKLVKIGDVTQVS-VVKEFVDVFPEELPGLPPEREI 627

Query: 231 DFAIELELDTTLISIAPYRMPPAELKEPK--VHELLDKDFIRPSVSPWGASVPFVKKKDG 290
           +F I+L  DT  ISI PYRM PAELKE K  + +LLDK FIRPSVSPWGA V FVKKKDG
Sbjct: 628 EFCIDLIPDTRPISIPPYRMAPAELKELKDQLEDLLDKGFIRPSVSPWGAPVLFVKKKDG 687

Query: 291 SMRLCIDYREL-------------IDDLFDQLQGVTVFSKIDLRSGYHQLRIRDSDIPKT 350
           S+RLCIDYR+L             IDDLFDQLQG   FSKIDLRSGYHQLRIR+ DIPK 
Sbjct: 688 SLRLCIDYRQLNKVTVKNKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRIRNEDIPKI 747

Query: 351 AFRSSYEHYEFIVISFGLTNAPIVFMDLMNKVFKNFLDTFVIT-------------EHEE 410
           AF++ Y HYEF+V+SFGLTNAP  FMDLMN+VFK +LD FV+              EHE+
Sbjct: 748 AFQTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDKFVVVFIDDILIYSKSREEHEQ 807

Query: 411 HLHKVLETLRANKLYAKFSKCEFWLKQVAFLGHVVSSEGVYVDPLKIEVVTSWSRPSIVS 445
           HL  VL+ LR ++LYAKFSKCEFWL+ VAFLGHVVS EG+ VD  KIE V  W RP+ V+
Sbjct: 808 HLKIVLQILREHRLYAKFSKCEFWLESVAFLGHVVSKEGIQVDTKKIEAVEKWPRPTSVT 867

[Close]

BLAST of Cucsa.279480 vs. NCBI nr
Match: gi|590613116|ref|XP_007022574.1| (DNA/RNA polymerases superfamily protein [Theobroma cacao])

HSP 1 Score: 38.9 bits (89), Expect = 2.8e+01
Identity = 24/83 (28.92%), Postives = 41/83 (49.40%), Query Frame = 1


Query: 84  STMLEEYDQEFDMMLRFAPELVGNEQTIAERFVKGLRDEIRGFVRALKPTTQAEALHLA- 143
           S  + EYD +F  + R+AP LV  E+   +RFV GL + +   V +   TT + A+  A 
Sbjct: 236 SMTVSEYDIKFTQLARYAPYLVSTEEMKIQRFVDGLVESLFRAVASRDFTTYSAAVDRAQ 295

Query: 144 -VDMSIGKDEVHAKSSDKGTSSG 165
            ++M   +       + +G + G
Sbjct: 296 RIEMRTSESRAARDRAKRGKTEG 318

HSP 2 Score: 342.0 bits (876), Expect = 1.5e-90
Identity = 191/350 (54.57%), Postives = 219/350 (62.57%), Query Frame = 1


Query: 171 DMCDFDVILGMDWLVVNHASMDSSCKEVVFSPP----------------------TEPKL 230
           D+   DVILGMDWL  NHAS+D   KEV F  P                      T  KL
Sbjct: 211 DLSGLDVILGMDWLARNHASVDCFSKEVTFRRPGLPEVVFHGGIGRPLPRLISTITAKKL 270

Query: 231 --------------------------VVREFPYVFSEEIPGLTPHWEIDFAIELELDTTL 290
                                     VVR+FP VF EE+PGL P  E+DF IEL   T  
Sbjct: 271 LNKGCQGYLAHVIDTRVSGVRLEDMPVVRDFPNVFPEELPGLPPEREVDFPIELIPGTVP 330

Query: 291 ISIAPYRMPPAELKEPKVH--ELLDKDFIRPSVSPWGASVPFVKKKDGSMRLCIDYREL- 350
           IS+ PYRM P EL+E KV   +L+DK FIRPS+SPWGA V FVKKKDGS+RLCIDYR+L 
Sbjct: 331 ISLPPYRMAPTELRELKVQLQDLVDKGFIRPSISPWGAPVLFVKKKDGSLRLCIDYRQLN 390

Query: 351 ------------IDDLFDQLQGVTVFSKIDLRSGYHQLRIRDSDIPKTAFRSSYEHYEFI 410
                       ID LFDQLQG  VFSKIDLRSGYHQLRIR+SDIPKTAFR+ Y HYEF+
Sbjct: 391 KVTIPNRYPLPRIDYLFDQLQGAKVFSKIDLRSGYHQLRIRESDIPKTAFRTRYGHYEFL 450

Query: 411 VISFGLTNAPIVFMDLMNKVFKNFLDTFVIT-------------EHEEHLHKVLETLRAN 445
           V+SFGLTNAP  FMDLMN+VF+ +LD FVI              EH  HL +VL+TLR +
Sbjct: 451 VMSFGLTNAPAAFMDLMNRVFRPYLDRFVIVFIDDILIYSRSQEEHVRHLKRVLQTLRQH 510

[Close]

BLAST of Cucsa.279480 vs. NCBI nr
Match: gi|595796147|ref|XP_007201110.1| (hypothetical protein PRUPE_ppa024392mg [Prunus persica])

HSP 1 Score: 329.3 bits (843), Expect = 1.0e-86
Identity = 172/326 (52.76%), Postives = 215/326 (65.95%), Query Frame = 1


Query: 172 MCDFDVILGMDWLVVNHASMDSSCKEVVFSPPTEPKL----------------------- 231
           M D DVIL MDWL  + AS++   KEVVFS P  P++                       
Sbjct: 410 MVDLDVILWMDWLAKHCASVNCFRKEVVFSSPRRPEVTFYVEPMTAKQLLIKWCSGYIAH 469

Query: 232 ---------------VVREFPYVFSEEIPGLTPHWEIDFAIELELDTTLISIAPYRMPPA 291
                          +V+EFP VF E++PGL PH EI+F I+L      IS APYRM PA
Sbjct: 470 VINTRDNRLRLEDIPIVQEFPNVFPEDLPGLPPHREIEFIIKLAPGMNPISQAPYRMAPA 529

Query: 292 ELKEPKVH--ELLDKDFIRPSVSPWGASVPFVKKKDGSMRLCIDYREL------------ 351
           EL+E K+   EL+DK FIRPS SPWG    FVKKKDG+MRLCIDYR+L            
Sbjct: 530 ELRELKIQLQELVDKGFIRPSFSPWGPPALFVKKKDGTMRLCIDYRQLNKVTVRNRYPLP 589

Query: 352 -IDDLFDQLQGVTVFSKIDLRSGYHQLRIRDSDIPKTAFRSSYEHYEFIVISFGLTNAPI 411
            +DDLFDQL+G  +FSKIDLRSGYHQLR+R+ D+PKT FR+ YEHYEF+V+ FGLTN P 
Sbjct: 590 RVDDLFDQLKGAKIFSKIDLRSGYHQLRVREEDVPKTIFRTRYEHYEFLVMPFGLTNVPA 649

Query: 412 VFMDLMNKVFKNFLDTFVITEHEEHLHKVLETLRANKLYAKFSKCEFWLKQVAFLGHVVS 445
            F+DL+N+VF+ +LD FVI  H +HLH VL+TLR  +L AKFSKC+FWL +V+FLGHV+S
Sbjct: 650 AFVDLINRVFRCYLDRFVIKAHMKHLHIVLKTLRRRQLNAKFSKCQFWLDRVSFLGHVIS 709

[Close]

BLAST of Cucsa.279480 vs. NCBI nr
Match: gi|672193193|ref|XP_008775966.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696207 [Phoenix dactylifera])

HSP 1 Score: 327.4 bits (838), Expect = 3.9e-86
Identity = 171/305 (56.07%), Postives = 209/305 (68.52%), Query Frame = 1


Query: 171 DMCDFDVILGMDWLVVNHASMDSSCKEVVFSPPTEPKLVVREFPYVFSEEIPGLTPHWEI 230
           +M DFD+ILGMDWL   H ++D   K V F     P  +VREFP VF E++PGL P  E+
Sbjct: 354 EMKDFDMILGMDWLATYHTTVDCFKKTVKFQISDIP--IVREFPDVFPEDLPGLPPDREV 413

Query: 231 DFAIELELDTTLISIAPYRMPPAELK--EPKVHELLDKDFIRPSVSPWGASVPFVKKKDG 290
           +F+I+L   T  IS A YR+ PAELK  + ++ ELLDK FIRPSVSPWGA V FVK+KDG
Sbjct: 414 EFSIDLIPGTEPISKALYRIAPAELKVLKEQLQELLDKGFIRPSVSPWGAPVLFVKRKDG 473

Query: 291 SMRLCIDYREL-------------IDDLFDQLQGVTVFSKIDLRSGYHQLRIRDSDIPKT 350
           S RLCIDYRE+             IDDLFDQLQG  +FSK+DLRS YHQL+I+  DIPKT
Sbjct: 474 SFRLCIDYREINGVTVRNKYPLPRIDDLFDQLQGTQIFSKLDLRSEYHQLKIQAEDIPKT 533

Query: 351 AFRSSYEHYEFIVISFGLTNAPIVFMDLMNKVFKNFLDTFVIT-------------EHEE 410
           AFR+ Y HYEF+V+ FGLTNAP  FMDLMN++FK +LD FV+               HEE
Sbjct: 534 AFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRMFKPYLDQFVVVFIDDILVYSKSPQAHEE 593

Query: 411 HLHKVLETLRANKLYAKFSKCEFWLKQVAFLGHVVSSEGVYVDPLKIEVVTSWSRPSIVS 448
           HL  VL+TLR N+LY K  KCEFWL  + FL HV+S +G+ VDP K+E V  WSRP+ VS
Sbjct: 594 HLRTVLQTLRENELYGKLQKCEFWLNSITFLEHVISKDGISVDPKKVEAVVDWSRPTNVS 653

The following BLAST results are available for this feature:

BLAST of Cucsa.279480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YI31B_YEAST	1.6e-26	30.04	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
YG31B_YEAST	1.6e-26	30.04	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
TF24_SCHPO	1.0e-25	28.73	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
TF212_SCHPO	1.0e-25	28.73	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
TF21_SCHPO	1.0e-25	28.73	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cucsa.279480 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061FHZ8_THECC	2.2e-91	61.59	DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_033345 PE=4 SV...	[more]
A0A061FHZ8_THECC	2.0e+01	28.92	DNA/RNA polymerases superfamily protein OS=Theobroma cacao GN=TCM_033345 PE=4 SV...	[more]
E5GC03_CUCME	3.0e-85	62.63	Ty3-gypsy retrotransposon protein (Fragment) OS=Cucumis melo subsp. melo PE=4 SV...	[more]
Q6L3M7_SOLDE	5.7e-84	61.74	Gag-pol protein, putative OS=Solanum demissum GN=SDM1_27t00008 PE=4 SV=2	[more]
Q6L3M7_SOLDE	1.4e+00	55.56	Gag-pol protein, putative OS=Solanum demissum GN=SDM1_27t00008 PE=4 SV=2	[more]

BLAST of Cucsa.279480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|702455653\|ref\|XP_010026793.1\|	4.8e-92	61.13	PREDICTED: uncharacterized protein LOC104417177 [Eucalyptus grandis]	[more]
gi\|702455653\|ref\|XP_010026793.1\|	6.9e+02	36.59	PREDICTED: uncharacterized protein LOC104417177 [Eucalyptus grandis]	[more]
gi\|590613116\|ref\|XP_007022574.1\|	2.8e+01	28.92	DNA/RNA polymerases superfamily protein [Theobroma cacao]	[more]
gi\|595796147\|ref\|XP_007201110.1\|	1.0e-86	52.76	hypothetical protein PRUPE_ppa024392mg [Prunus persica]	[more]
gi\|672193193\|ref\|XP_008775966.1\|	3.9e-86	56.07	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696207 [Phoenix da...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000477	RT_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.279480.1	Cucsa.279480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 290..416 score: 1.
None	No IPR available	GENE3D	G3DSA:3.10.10.10		coord: 233..355 score: 3.0
None	No IPR available	PANTHER	PTHR10178	GAG/POL/ENV POLYPROTEIN	coord: 8..112 score: 1.1E-99coord: 172..444 score: 1.1
None	No IPR available	PANTHER	PTHR10178:SF283	SUBFAMILY NOT NAMED	coord: 172..444 score: 1.1E-99coord: 8..112 score: 1.1
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 210..444 score: 8.89

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.279480	Melon (DHL92) v3.6.1	cgymedB462
Cucsa.279480	Wax gourd	cgywgoB563
Cucsa.279480	Melon (DHL92) v3.5.1	cgymeB466
Cucsa.279480	Watermelon (Charleston Gray)	cgywcgB482
Cucsa.279480	Watermelon (97103) v1	cgywmB510