Cucsa.279430 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.279430
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold02622 : 6335 .. 6873 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCAATCTTCTTCCTCACTCTCCGTTTCTCCCCTTCCTTCTTCACTCTCCTCCTTCTTCTTCTAATCCCTGCCATTCTCTTCATCGCTAACAAAAAATCCAATCCCCTTTACCATCACCTGTTCGACGAAAACCCTCAAACAACTCCCATACAAGAATCCACCACACAAATCGGACAACACATTTCTTCCGATGATGAAACTAGTTGTAGCAGCAGCAGTAACGATGGTGGATTAGGAAGTGGAGATTTCAAGTCCGATCTCTGGATGCATTTGGACGAACTGACTCGGAATCTTCCGTTGTCTGAGGATTATTCGAGTTCCGAAGATGACGACGACGATAGCTTGATTGAAATTCCTCTTCTTCCAAATTCGAATGGGATTCGGAATCTTGAAACGTGTTTGCCTAATTTGTTACCAGATTCTGTTTTGAGACAGCATGGATTTGTTGAGCTTTTGGAAGAGATCAATGAGGAAGATAACTTGATTGAGATCGATATTTCCAAAGGTTTCAACCGATTTCCCACTGTTTGCAATTGA

mRNA sequence

cttcaatcttcttcctcactctccgtttctccccttccttcttcactctcctccttcttcttctaatccctgccattctcttcATCGCTAACAAAAAATCCAATCCCCTTTACCATCACCTGTTCGACGAAAACCCTCAAACAACTCCCATACAAGAATCCACCACACAAATCGGACAACACATTTCTTCCGATGATGAAACTAGTTGTAGCAGCAGCAGTAACGATGGTGGATTAGGAAGTGGAGATTTCAAGTCCGATCTCTGGATGCATTTGGACGAACTGACTCGGAATCTTCCGTTGTCTGAGGATTATTCGAGTTCCGAAGATGACGACGACGATAGCTTGATTGAAATTCCTCTTCTTCCAAATTCGAATGGGATTCGGAATCTTGAAACGTGTTTGCCTAATTTGTTACCAGATTCTGTTTTGAGACAGCATGGATTTGTTGAGCTTTTGGAAGAGATCAATGAGGAAGATAACTTGATTGAGATCGATATTTCCAAAGGTTTCAACCGATTTCCCACTGTTTGCAATTGA

Coding sequence (CDS)

CTTCAATCTTCTTCCTCACTCTCCGTTTCTCCCCTTCCTTCTTCACTCTCCTCCTTCTTCTTCTAATCCCTGCCATTCTCTTCATCGCTAACAAAAAATCCAATCCCCTTTACCATCACCTGTTCGACGAAAACCCTCAAACAACTCCCATACAAGAATCCACCACACAAATCGGACAACACATTTCTTCCGATGATGAAACTAGTTGTAGCAGCAGCAGTAACGATGGTGGATTAGGAAGTGGAGATTTCAAGTCCGATCTCTGGATGCATTTGGACGAACTGACTCGGAATCTTCCGTTGTCTGAGGATTATTCGAGTTCCGAAGATGACGACGACGATAGCTTGATTGAAATTCCTCTTCTTCCAAATTCGAATGGGATTCGGAATCTTGAAACGTGTTTGCCTAATTTGTTACCAGATTCTGTTTTGAGACAGCATGGATTTGTTGAGCTTTTGGAAGAGATCAATGAGGAAGATAACTTGATTGAGATCGATATTTCCAAAGGTTTCAACCGATTTCCCACTGTTTGCAATTGA

Protein sequence

SIFFLTLRFSPSFFTLLLLLLIPAILFIANKKSNPLYHHLFDENPQTTPIQESTTQIGQHISSDDETSCSSSSNDGGLGSGDFKSDLWMHLDELTRNLPLSEDYSSSEDDDDDSLIEIPLLPNSNGIRNLETCLPNLLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFPTVCN*
Homology
[Close]
BLAST of Cucsa.279430 vs. TrEMBL
Match: A0A0A0K6W9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G101780 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 4.0e-97
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1 

Query: 1   SIFFLTLRFSPSFFTLLLLLLIPAILFIANKKSNPLYHHLFDENPQTTPIQESTTQIGQH 60
           SIFFLTLRFSPSFFTLLLLLLIPAILFIANKKSNPLYHHLFDENPQTTPIQESTTQIGQH
Sbjct: 34  SIFFLTLRFSPSFFTLLLLLLIPAILFIANKKSNPLYHHLFDENPQTTPIQESTTQIGQH 93

Query: 61  ISSDDETSCSSSSNDGGLGSGDFKSDLWMHLDELTRNLPLSEDYSSSEDDDDDSLIEIPL 120
           ISSDDETSCSSSSNDGGLGSGDFKSDLWMHLDELTRNLPLSEDYSSSEDDDDDSLIEIPL
Sbjct: 94  ISSDDETSCSSSSNDGGLGSGDFKSDLWMHLDELTRNLPLSEDYSSSEDDDDDSLIEIPL 153

Query: 121 LPNSNGIRNLETCLPNLLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFPTVCN 179
           LPNSNGIRNLETCLPNLLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFPTVCN
Sbjct: 154 LPNSNGIRNLETCLPNLLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFPTVCN 211

[Close]
BLAST of Cucsa.279430 vs. TrEMBL
Match: A0A0D2Q3D5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G099600 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 6.5e-15
Identity = 68/194 (35.05%), Postives = 99/194 (51.03%), Query Frame = 1 

Query: 4   FLTLRFSPSFFTLLLLLLIPAILFIANKKSNPLYHHLFDENPQTTPIQESTTQIGQHISS 63
           FL L F    FT  +L++  + L   +KKSN +      ENP +T +Q     +   + +
Sbjct: 77  FLGLGFYVILFTTTILIISTSFLVKFSKKSNGV----LVENPSSTKLQVEDEVLTPLLMN 136

Query: 64  DDETSCSSSSNDGGLGSGDFKSDL------------WMHLDE-LTRNLPLSEDYSSSEDD 123
              +  +  +++G +        L            WM     L RN  +S++YS+SE+D
Sbjct: 137 KTVSDAAIEADNGIVNEFQVDDSLDLTSEREYVEMKWMISGNVLERNREISDEYSTSEED 196

Query: 124 DDDSLIEIPLLPN-SNGIR-----NLETCLPNLLPDSVLRQHGFVELLEEINE---EDNL 176
           D++ LIEI +  N + G+      NL+  LP LLP+ V  Q   VELLEEINE   E+NL
Sbjct: 197 DEEGLIEIAIPSNDTTGLNEEPKPNLQPNLPTLLPEPVSHQQDLVELLEEINEANEEENL 256

[Close]
BLAST of Cucsa.279430 vs. TrEMBL
Match: B9S9T8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0522220 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.1e-12
Identity = 52/119 (43.70%), Postives = 73/119 (61.34%), Query Frame = 1 

Query: 61  ISSDDETSCSSSSNDGGLGSGDFKSDLWMHLDELTRNLPLSE-DYSSSEDDDDDSLIEIP 120
           + S D  S S SS+D    S +F+ + WM  + + +N+ +SE   SSS+DD+DD+LIEI 
Sbjct: 122 VESTDFPSASESSDDFS-ASDNFELN-WMSFNNVGKNVAISECSISSSDDDEDDNLIEIS 181

Query: 121 LLPNSNGIRN------LETCLPNLLPDSVLRQHGFVELLEEI---NEEDNLIEIDISKG 170
              N++   N      L+T LP   P+S+ RQ G +ELL EI   NEE+NLIEID+S G
Sbjct: 182 FPDNNSSELNEESEEKLQTELPEYFPESIFRQEGLMELLAEISEVNEEENLIEIDLSVG 238

[Close]
BLAST of Cucsa.279430 vs. TrEMBL
Match: C6TE55_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-09
Identity = 51/133 (38.35%), Postives = 77/133 (57.89%), Query Frame = 1 

Query: 50  IQESTTQIGQHISSDDETSCSSSSNDGGLGSGDFKSDLWMHLDE--LTRNLPLSEDYSSS 109
           +QE   Q  + + SD      S S+D  +    F+ D   + +E  ++ +L   +DY   
Sbjct: 130 VQEHRLQ--EDMQSDYSLPSDSESSDDSIMGESFEMDHIGNQNEDIISESLNSDDDYEED 189

Query: 110 EDDDD-DSLIEIPLLPNSN-------GIRNLETCLPNLLPDSVLRQHGFVELLEEI---N 169
           ED+++ D+LIEI L P+S+         + L+T LP+ LPDS+ +Q G +ELLEEI   N
Sbjct: 190 EDEEEEDTLIEINL-PSSHFPDLIEDPKQKLQTKLPDFLPDSIFKQQGLMELLEEINDMN 249

[Close]
BLAST of Cucsa.279430 vs. TrEMBL
Match: A0A0B2PNZ4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_039404 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-09
Identity = 51/133 (38.35%), Postives = 77/133 (57.89%), Query Frame = 1 

Query: 50  IQESTTQIGQHISSDDETSCSSSSNDGGLGSGDFKSDLWMHLDE--LTRNLPLSEDYSSS 109
           +QE   Q  + + SD      S S+D  +    F+ D   + +E  ++ +L   +DY   
Sbjct: 130 VQEHRLQ--EDMQSDYSLPSDSESSDDSIMGESFEMDHIGNQNEDIISESLNSDDDYEED 189

Query: 110 EDDDD-DSLIEIPLLPNSN-------GIRNLETCLPNLLPDSVLRQHGFVELLEEI---N 169
           ED+++ D+LIEI L P+S+         + L+T LP+ LPDS+ +Q G +ELLEEI   N
Sbjct: 190 EDEEEEDTLIEINL-PSSHFPDLIEDPKQKLQTKLPDFLPDSIFKQQGLMELLEEINDMN 249

[Close]
BLAST of Cucsa.279430 vs. NCBI nr
Match: gi|700188779|gb|KGN44012.1| (hypothetical protein Csa_7G101780 [Cucumis sativus])

HSP 1 Score: 362.1 bits (928), Expect = 5.7e-97
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1 

Query: 1   SIFFLTLRFSPSFFTLLLLLLIPAILFIANKKSNPLYHHLFDENPQTTPIQESTTQIGQH 60
           SIFFLTLRFSPSFFTLLLLLLIPAILFIANKKSNPLYHHLFDENPQTTPIQESTTQIGQH
Sbjct: 34  SIFFLTLRFSPSFFTLLLLLLIPAILFIANKKSNPLYHHLFDENPQTTPIQESTTQIGQH 93

Query: 61  ISSDDETSCSSSSNDGGLGSGDFKSDLWMHLDELTRNLPLSEDYSSSEDDDDDSLIEIPL 120
           ISSDDETSCSSSSNDGGLGSGDFKSDLWMHLDELTRNLPLSEDYSSSEDDDDDSLIEIPL
Sbjct: 94  ISSDDETSCSSSSNDGGLGSGDFKSDLWMHLDELTRNLPLSEDYSSSEDDDDDSLIEIPL 153

Query: 121 LPNSNGIRNLETCLPNLLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFPTVCN 179
           LPNSNGIRNLETCLPNLLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFPTVCN
Sbjct: 154 LPNSNGIRNLETCLPNLLPDSVLRQHGFVELLEEINEEDNLIEIDISKGFNRFPTVCN 211

[Close]
BLAST of Cucsa.279430 vs. NCBI nr
Match: gi|823132289|ref|XP_012461751.1| (PREDICTED: uncharacterized protein LOC105781776 [Gossypium raimondii])

HSP 1 Score: 89.0 bits (219), Expect = 9.3e-15
Identity = 68/194 (35.05%), Postives = 99/194 (51.03%), Query Frame = 1 

Query: 4   FLTLRFSPSFFTLLLLLLIPAILFIANKKSNPLYHHLFDENPQTTPIQESTTQIGQHISS 63
           FL L F    FT  +L++  + L   +KKSN +      ENP +T +Q     +   + +
Sbjct: 77  FLGLGFYVILFTTTILIISTSFLVKFSKKSNGV----LVENPSSTKLQVEDEVLTPLLMN 136

Query: 64  DDETSCSSSSNDGGLGSGDFKSDL------------WMHLDE-LTRNLPLSEDYSSSEDD 123
              +  +  +++G +        L            WM     L RN  +S++YS+SE+D
Sbjct: 137 KTVSDAAIEADNGIVNEFQVDDSLDLTSEREYVEMKWMISGNVLERNREISDEYSTSEED 196

Query: 124 DDDSLIEIPLLPN-SNGIR-----NLETCLPNLLPDSVLRQHGFVELLEEINE---EDNL 176
           D++ LIEI +  N + G+      NL+  LP LLP+ V  Q   VELLEEINE   E+NL
Sbjct: 197 DEEGLIEIAIPSNDTTGLNEEPKPNLQPNLPTLLPEPVSHQQDLVELLEEINEANEEENL 256

[Close]
BLAST of Cucsa.279430 vs. NCBI nr
Match: gi|255563510|ref|XP_002522757.1| (PREDICTED: uncharacterized protein LOC8286842 [Ricinus communis])

HSP 1 Score: 79.3 bits (194), Expect = 7.4e-12
Identity = 52/119 (43.70%), Postives = 73/119 (61.34%), Query Frame = 1 

Query: 61  ISSDDETSCSSSSNDGGLGSGDFKSDLWMHLDELTRNLPLSE-DYSSSEDDDDDSLIEIP 120
           + S D  S S SS+D    S +F+ + WM  + + +N+ +SE   SSS+DD+DD+LIEI 
Sbjct: 122 VESTDFPSASESSDDFS-ASDNFELN-WMSFNNVGKNVAISECSISSSDDDEDDNLIEIS 181

Query: 121 LLPNSNGIRN------LETCLPNLLPDSVLRQHGFVELLEEI---NEEDNLIEIDISKG 170
              N++   N      L+T LP   P+S+ RQ G +ELL EI   NEE+NLIEID+S G
Sbjct: 182 FPDNNSSELNEESEEKLQTELPEYFPESIFRQEGLMELLAEISEVNEEENLIEIDLSVG 238

[Close]
BLAST of Cucsa.279430 vs. NCBI nr
Match: gi|1009176662|ref|XP_015869551.1| (PREDICTED: uncharacterized protein LOC107406855 [Ziziphus jujuba])

HSP 1 Score: 76.3 bits (186), Expect = 6.2e-11
Identity = 47/84 (55.95%), Postives = 61/84 (72.62%), Query Frame = 1 

Query: 96  RNLPLSEDYSSSEDDDDD-SLIEIPLLPN-SNGIR-----NLETCLPNLLPDSVLRQHGF 155
           +NL +S+   S EDDDDD SLIEI L  + S+GI+     NL++ LP LLP+S+ R+HGF
Sbjct: 156 QNLAVSDSSVSEEDDDDDDSLIEISLPGSESSGIKENANLNLQSKLPELLPESIFREHGF 215

Query: 156 VELLE---EINEEDNLIEIDISKG 170
            EL+E   E+NEE+NLIEIDIS G
Sbjct: 216 RELIEEMNEMNEEENLIEIDISMG 239

[Close]
BLAST of Cucsa.279430 vs. NCBI nr
Match: gi|1009177747|ref|XP_015870143.1| (PREDICTED: uncharacterized protein LOC107407378 [Ziziphus jujuba])

HSP 1 Score: 75.9 bits (185), Expect = 8.2e-11
Identity = 47/85 (55.29%), Postives = 61/85 (71.76%), Query Frame = 1 

Query: 96  RNLPLSEDYSSSEDDDDD--SLIEIPLLPN-SNGIR-----NLETCLPNLLPDSVLRQHG 155
           +NL +S+   S EDDDDD  SLIEI L  + S+GI+     NL++ LP LLP+S+ R+HG
Sbjct: 155 QNLAVSDSSVSEEDDDDDDDSLIEISLPGSESSGIKENANLNLQSKLPELLPESIFREHG 214

Query: 156 FVELLE---EINEEDNLIEIDISKG 170
           F EL+E   E+NEE+NLIEIDIS G
Sbjct: 215 FRELIEEMNEMNEEENLIEIDISMG 239

The following BLAST results are available for this feature:
BLAST of Cucsa.279430 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6W9_CUCSA4.0e-97100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G101780 PE=4 SV=1[more]
A0A0D2Q3D5_GOSRA6.5e-1535.05Uncharacterized protein OS=Gossypium raimondii GN=B456_002G099600 PE=4 SV=1[more]
B9S9T8_RICCO5.1e-1243.70Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0522220 PE=4 SV=1[more]
C6TE55_SOYBN2.4e-0938.35Putative uncharacterized protein OS=Glycine max PE=2 SV=1[more]
A0A0B2PNZ4_GLYSO2.4e-0938.35Uncharacterized protein OS=Glycine soja GN=glysoja_039404 PE=4 SV=1[more]
BLAST of Cucsa.279430 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188779|gb|KGN44012.1|5.7e-97100.00hypothetical protein Csa_7G101780 [Cucumis sativus][more]
gi|823132289|ref|XP_012461751.1|9.3e-1535.05PREDICTED: uncharacterized protein LOC105781776 [Gossypium raimondii][more]
gi|255563510|ref|XP_002522757.1|7.4e-1243.70PREDICTED: uncharacterized protein LOC8286842 [Ricinus communis][more]
gi|1009176662|ref|XP_015869551.1|6.2e-1155.95PREDICTED: uncharacterized protein LOC107406855 [Ziziphus jujuba][more]
gi|1009177747|ref|XP_015870143.1|8.2e-1155.29PREDICTED: uncharacterized protein LOC107407378 [Ziziphus jujuba][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.279430.1Cucsa.279430.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.279430Cla003306Watermelon (97103) v1cgywmB510
Cucsa.279430MELO3C024932Melon (DHL92) v3.5.1cgymeB466
Cucsa.279430ClCG09G021280Watermelon (Charleston Gray)cgywcgB482
Cucsa.279430MELO3C024932.2Melon (DHL92) v3.6.1cgymedB462
Cucsa.279430Bhi09G001472Wax gourdcgywgoB563
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None