Cucsa.277800 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.277800
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionMembrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain, putative isoform 2
Locationscaffold02604 : 401969 .. 402702 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGCAAAGCTCCCACCCCCTGTTAAAGTAAACAATGTCAAACAATTTGGGTTTTTAGTAATAAGCTTCTTTTCAAATTCTGTAGTTTCTTAAACTCTTTGGTTTTAGTTTGCATATTTTGTGAAGCTTATTTTTACGTCAATCTTGCAGCAATTAACTCTCCAACATCCTGCTGTCCGCAGTAAATTGGGATTGCCTTCCAGGGATGCTCCTGTGGGCACTACAACTCTCAGAGAAACCAATAATCCAGGCAAAATACCGTTGGAGACAACCACTAAGTGGAAAAAAATTTCTGTAGAGAAGCTGTCTCCTAAGGAATTGCTTGCTGTAAATTATGCTGAGCTCAATTAtTTTTTTGTGTTGGTTCAATTTAGTGTAAATATGTAATACAAACATTTCAGGTAGCTAATGGTTAAACTTGACAGCTTTCTGTCCAACTCCTATCAAAAGGGCAAAAaGAAAAGGCTATTCCTTTACTGCGGTAAGCTCTCTAGGCTTCTCTCAGATTCCACTATCATGTATATGTTCTATATGGGTTTCTCAGGCAGGTTGTTTTGGCCTAAATTGAAGGGGAAAAAAAaGTTGGCGACACATGACTAATTTAATACTTTAGACAGGCACTTAACAAGGAACCTGAGTATGTTCGAGCTTTGGTTGTCATGGGGCAAACTCTGTTACAAAATGCACAACCTGCAGAGGCTACTGTATACTTAGAGCGTGCAATTTCCAAG

mRNA sequence

ATGGGTGCAAAGCTCCCACCCCCTGTTAAATTTGCATATTTTGTGAAGCTTATTTTTACGTCAATCTTGCAGCAATTAACTCTCCAACATCCTGCTGTCCGCAGTAAATTGGGATTGCCTTCCAGGGATGCTCCTGTGGGCACTACAACTCTCAGAGAAACCAATAATCCAGGCAAAATACCGTTGGAGACAACCACTAAGTGGAAAAAAATTTCTGTAGAGAAGCTGTCTCCTAAGGAATTGCTTGCTCTTTCTGTCCAACTCCTATCAAAAGGGCAAAAAGAAAAGGCTATTCCTTTACTGCGACAGGCACTTAACAAGGAACCTGAGTATGTTCGAGCTTTGGTTGTCATGGGGCAAACTCTGTTACAAAATGCACAACCTGCAGAGGCTACTGTATACTTAGAGCGTGCAATTTCCAAG

Coding sequence (CDS)

ATGGGTGCAAAGCTCCCACCCCCTGTTAAATTTGCATATTTTGTGAAGCTTATTTTTACGTCAATCTTGCAGCAATTAACTCTCCAACATCCTGCTGTCCGCAGTAAATTGGGATTGCCTTCCAGGGATGCTCCTGTGGGCACTACAACTCTCAGAGAAACCAATAATCCAGGCAAAATACCGTTGGAGACAACCACTAAGTGGAAAAAAATTTCTGTAGAGAAGCTGTCTCCTAAGGAATTGCTTGCTCTTTCTGTCCAACTCCTATCAAAAGGGCAAAAaGAAAAGGCTATTCCTTTACTGCGACAGGCACTTAACAAGGAACCTGAGTATGTTCGAGCTTTGGTTGTCATGGGGCAAACTCTGTTACAAAATGCACAACCTGCAGAGGCTACTGTATACTTAGAGCGTGCAATTTCCAAG

Protein sequence

MGAKLPPPVKFAYFVKLIFTSILQQLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKIPLETTTKWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQTLLQNAQPAEATVYLERAISK
Homology
[Close]
BLAST of Cucsa.277800 vs. Swiss-Prot
Match: ALB32_ARATH (ALBINO3-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=ALB3L2 PE=2 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 1.7e-24
Identity = 66/135 (48.89%), Postives = 89/135 (65.93%), Query Frame = 1 

Query: 7   PPVKFAYFVKLIFTSILQQLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKIPLETTT 66
           P     Y+V     +I QQL+L+HP V +KLGL S+ A  G     E +      +++ +
Sbjct: 275 PQGSLVYWVTNSSVNIFQQLSLKHPTVGAKLGLLSQGATPGMGHSMEISESVIKYVDSDS 334

Query: 67  KWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQTLLQNA 126
           K + +S++ L+P+ELL+LSVQ+LSKG KE +I LLR AL K+P YVR LV+MGQ LLQ  
Sbjct: 335 KEQTLSLQTLTPEELLSLSVQVLSKGDKETSIQLLRLALEKDPGYVRGLVLMGQALLQKT 394

Query: 127 QPAEATVYLERAISK 142
           Q +EAT YLE AISK
Sbjct: 395 QLSEATEYLELAISK 409

[Close]
BLAST of Cucsa.277800 vs. Swiss-Prot
Match: ALB33_ARATH (ALBINO3-like protein 3, mitochondrial OS=Arabidopsis thaliana GN=ALB3L3 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.1e-21
Identity = 62/138 (44.93%), Postives = 85/138 (61.59%), Query Frame = 1 

Query: 7   PPVKFAYFVKLIFTSILQQLTLQHPAVRSKLGLPSRDA---PVGTTTLRETNNPGKIPLE 66
           P     Y+   +  SI QQ  L HP V +KLGL + D+     G   L   N  GK+  +
Sbjct: 314 PQGSLLYWATNLSFSIAQQSILNHPVVSAKLGLQANDSVQKEAGNPILTNINE-GKLT-D 373

Query: 67  TTTKWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQTLL 126
            ++K + ISV  L+PKEL+ALS + LS G K+K+IPLLR AL K+PEY++A++++GQ L 
Sbjct: 374 PSSKGRLISVHNLTPKELVALSAKYLSGGHKDKSIPLLRLALEKDPEYLQAMIILGQALY 433

Query: 127 QNAQPAEATVYLERAISK 142
           Q  Q AEA   LE+A SK
Sbjct: 434 QKDQFAEAAKCLEQAASK 449

[Close]
BLAST of Cucsa.277800 vs. TrEMBL
Match: A0A0A0LHD0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G094360 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.5e-59
Identity = 126/141 (89.36%), Postives = 127/141 (90.07%), Query Frame = 1 

Query: 1   MGAKLPPPVKFAYFVKLIFTSILQQLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKI 60
           MGAKLPPPV              +QLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKI
Sbjct: 1   MGAKLPPPV--------------KQLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKI 60

Query: 61  PLETTTKWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQ 120
           PLETTTKWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQ
Sbjct: 61  PLETTTKWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQ 120

Query: 121 TLLQNAQPAEATVYLERAISK 142
           TLLQNAQPAEATVYLERAISK
Sbjct: 121 TLLQNAQPAEATVYLERAISK 127

[Close]
BLAST of Cucsa.277800 vs. TrEMBL
Match: M5WAE5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003958mg PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.6e-32
Identity = 75/135 (55.56%), Postives = 96/135 (71.11%), Query Frame = 1 

Query: 7   PPVKFAYFVKLIFTSILQQLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKIPLETTT 66
           P     Y+V     S++QQL L+ PAVR+KLGLP +DAP  T    +   P   PL + T
Sbjct: 284 PQGSLVYWVTNSSLSVIQQLVLKDPAVRAKLGLPDKDAPTDTAISEKPGTPEISPLASPT 343

Query: 67  KWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQTLLQNA 126
           +WKKI+++ LSP ELL LSVQ+LS+G KEKA+PLL+ AL K+PEY RAL+VMGQTLLQ +
Sbjct: 344 RWKKITLQNLSPTELLNLSVQVLSEGDKEKALPLLKLALEKDPEYARALIVMGQTLLQKS 403

Query: 127 QPAEATVYLERAISK 142
             AEAT Y +RAI+K
Sbjct: 404 LDAEATEYFQRAITK 418

[Close]
BLAST of Cucsa.277800 vs. TrEMBL
Match: B9RFU8_RICCO (Cytochrome oxidase biogenesis protein, putative OS=Ricinus communis GN=RCOM_1437450 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.3e-28
Identity = 71/135 (52.59%), Postives = 95/135 (70.37%), Query Frame = 1 

Query: 7   PPVKFAYFVKLIFTSILQQLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKIPLETTT 66
           P     Y+V     S++QQ++L+HPAVR+KLGLP++DAP  +    E  +P +  L+  +
Sbjct: 298 PQGSLVYWVTNSSLSVIQQMSLKHPAVRAKLGLPAKDAPAASADSEEMGSP-QASLDAPS 357

Query: 67  KWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQTLLQNA 126
           K  K+ VE L+PK+LLA+SVQLLS   +E+AIPLL+ AL K+P Y+ ALVVMGQTLLQ  
Sbjct: 358 KNGKVPVENLNPKQLLAISVQLLSNQHRERAIPLLQLALQKDPNYIGALVVMGQTLLQKE 417

Query: 127 QPAEATVYLERAISK 142
             AEA  +LERAISK
Sbjct: 418 MYAEARDHLERAISK 431

[Close]
BLAST of Cucsa.277800 vs. TrEMBL
Match: A0A061EYU4_THECC (Membrane insertion protein, putative isoform 3 OS=Theobroma cacao GN=TCM_025341 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.8e-27
Identity = 69/137 (50.36%), Postives = 96/137 (70.07%), Query Frame = 1 

Query: 5   LPPPVKFAYFVKLIFTSILQQLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKIPLET 64
           L P     Y+V     S++QQLTL+HPAVR+KLGLP +DA        E++  G   +E 
Sbjct: 140 LIPQGSLVYWVTNSSLSLIQQLTLKHPAVRAKLGLPDKDALATVENSEESSTAGTPSVEP 199

Query: 65  TTKWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQTLLQ 124
            +K ++I+V+ LSPKELLALS++ LS+ +K+ AI LL+ AL+K+PE+V+A+VVMGQTL+Q
Sbjct: 200 PSKQRRIAVQNLSPKELLALSIKHLSREEKDLAISLLKLALDKDPEHVKAMVVMGQTLMQ 259

Query: 125 NAQPAEATVYLERAISK 142
                EA+ YLE AISK
Sbjct: 260 KGLLVEASEYLEHAISK 276

[Close]
BLAST of Cucsa.277800 vs. TrEMBL
Match: A0A061EXZ7_THECC (Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain, putative isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_025341 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.8e-27
Identity = 69/137 (50.36%), Postives = 96/137 (70.07%), Query Frame = 1 

Query: 5   LPPPVKFAYFVKLIFTSILQQLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKIPLET 64
           L P     Y+V     S++QQLTL+HPAVR+KLGLP +DA        E++  G   +E 
Sbjct: 184 LIPQGSLVYWVTNSSLSLIQQLTLKHPAVRAKLGLPDKDALATVENSEESSTAGTPSVEP 243

Query: 65  TTKWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQTLLQ 124
            +K ++I+V+ LSPKELLALS++ LS+ +K+ AI LL+ AL+K+PE+V+A+VVMGQTL+Q
Sbjct: 244 PSKQRRIAVQNLSPKELLALSIKHLSREEKDLAISLLKLALDKDPEHVKAMVVMGQTLMQ 303

Query: 125 NAQPAEATVYLERAISK 142
                EA+ YLE AISK
Sbjct: 304 KGLLVEASEYLEHAISK 320

[Close]
BLAST of Cucsa.277800 vs. TAIR10
Match: AT1G65080.1 (AT1G65080.1 Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain)

HSP 1 Score: 113.6 bits (283), Expect = 9.8e-26
Identity = 66/135 (48.89%), Postives = 89/135 (65.93%), Query Frame = 1 

Query: 7   PPVKFAYFVKLIFTSILQQLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKIPLETTT 66
           P     Y+V     +I QQL+L+HP V +KLGL S+ A  G     E +      +++ +
Sbjct: 275 PQGSLVYWVTNSSVNIFQQLSLKHPTVGAKLGLLSQGATPGMGHSMEISESVIKYVDSDS 334

Query: 67  KWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQTLLQNA 126
           K + +S++ L+P+ELL+LSVQ+LSKG KE +I LLR AL K+P YVR LV+MGQ LLQ  
Sbjct: 335 KEQTLSLQTLTPEELLSLSVQVLSKGDKETSIQLLRLALEKDPGYVRGLVLMGQALLQKT 394

Query: 127 QPAEATVYLERAISK 142
           Q +EAT YLE AISK
Sbjct: 395 QLSEATEYLELAISK 409

[Close]
BLAST of Cucsa.277800 vs. TAIR10
Match: AT3G44370.1 (AT3G44370.1 Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain)

HSP 1 Score: 102.8 bits (255), Expect = 1.7e-22
Identity = 62/138 (44.93%), Postives = 85/138 (61.59%), Query Frame = 1 

Query: 7   PPVKFAYFVKLIFTSILQQLTLQHPAVRSKLGLPSRDA---PVGTTTLRETNNPGKIPLE 66
           P     Y+   +  SI QQ  L HP V +KLGL + D+     G   L   N  GK+  +
Sbjct: 314 PQGSLLYWATNLSFSIAQQSILNHPVVSAKLGLQANDSVQKEAGNPILTNINE-GKLT-D 373

Query: 67  TTTKWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQTLL 126
            ++K + ISV  L+PKEL+ALS + LS G K+K+IPLLR AL K+PEY++A++++GQ L 
Sbjct: 374 PSSKGRLISVHNLTPKELVALSAKYLSGGHKDKSIPLLRLALEKDPEYLQAMIILGQALY 433

Query: 127 QNAQPAEATVYLERAISK 142
           Q  Q AEA   LE+A SK
Sbjct: 434 QKDQFAEAAKCLEQAASK 449

[Close]
BLAST of Cucsa.277800 vs. NCBI nr
Match: gi|700206226|gb|KGN61345.1| (hypothetical protein Csa_2G094360 [Cucumis sativus])

HSP 1 Score: 236.9 bits (603), Expect = 2.2e-59
Identity = 126/141 (89.36%), Postives = 127/141 (90.07%), Query Frame = 1 

Query: 1   MGAKLPPPVKFAYFVKLIFTSILQQLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKI 60
           MGAKLPPPV              +QLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKI
Sbjct: 1   MGAKLPPPV--------------KQLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKI 60

Query: 61  PLETTTKWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQ 120
           PLETTTKWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQ
Sbjct: 61  PLETTTKWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQ 120

Query: 121 TLLQNAQPAEATVYLERAISK 142
           TLLQNAQPAEATVYLERAISK
Sbjct: 121 TLLQNAQPAEATVYLERAISK 127

[Close]
BLAST of Cucsa.277800 vs. NCBI nr
Match: gi|449442253|ref|XP_004138896.1| (PREDICTED: ALBINO3-like protein 2, chloroplastic [Cucumis sativus])

HSP 1 Score: 231.9 bits (590), Expect = 7.0e-58
Identity = 121/135 (89.63%), Postives = 124/135 (91.85%), Query Frame = 1 

Query: 7   PPVKFAYFVKLIFTSILQQLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKIPLETTT 66
           P     Y+V     + +QQLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKIPLETTT
Sbjct: 321 PQGSLVYWVTNSSFTAIQQLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKIPLETTT 380

Query: 67  KWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQTLLQNA 126
           KWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQTLLQNA
Sbjct: 381 KWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQTLLQNA 440

Query: 127 QPAEATVYLERAISK 142
           QPAEATVYLERAISK
Sbjct: 441 QPAEATVYLERAISK 455

[Close]
BLAST of Cucsa.277800 vs. NCBI nr
Match: gi|659082283|ref|XP_008441760.1| (PREDICTED: ALBINO3-like protein 2, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 219.9 bits (559), Expect = 2.8e-54
Identity = 113/135 (83.70%), Postives = 120/135 (88.89%), Query Frame = 1 

Query: 7   PPVKFAYFVKLIFTSILQQLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKIPLETTT 66
           P     Y+V     + +QQLTLQHPAVRSKLGLPSRDAPVG   +RETNNPGKIPLET T
Sbjct: 322 PQGSLVYWVTNSSFTAIQQLTLQHPAVRSKLGLPSRDAPVGNANVRETNNPGKIPLETPT 381

Query: 67  KWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQTLLQNA 126
           KWKK+SVEKLSPKELLALSVQLLSKGQKE+AIPLLRQALNK+PEYVRALVVMGQTLLQNA
Sbjct: 382 KWKKVSVEKLSPKELLALSVQLLSKGQKERAIPLLRQALNKDPEYVRALVVMGQTLLQNA 441

Query: 127 QPAEATVYLERAISK 142
           QPAEATVYLERAISK
Sbjct: 442 QPAEATVYLERAISK 456

[Close]
BLAST of Cucsa.277800 vs. NCBI nr
Match: gi|659082281|ref|XP_008441758.1| (PREDICTED: ALBINO3-like protein 2, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 219.9 bits (559), Expect = 2.8e-54
Identity = 113/135 (83.70%), Postives = 120/135 (88.89%), Query Frame = 1 

Query: 7   PPVKFAYFVKLIFTSILQQLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKIPLETTT 66
           P     Y+V     + +QQLTLQHPAVRSKLGLPSRDAPVG   +RETNNPGKIPLET T
Sbjct: 322 PQGSLVYWVTNSSFTAIQQLTLQHPAVRSKLGLPSRDAPVGNANVRETNNPGKIPLETPT 381

Query: 67  KWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQTLLQNA 126
           KWKK+SVEKLSPKELLALSVQLLSKGQKE+AIPLLRQALNK+PEYVRALVVMGQTLLQNA
Sbjct: 382 KWKKVSVEKLSPKELLALSVQLLSKGQKERAIPLLRQALNKDPEYVRALVVMGQTLLQNA 441

Query: 127 QPAEATVYLERAISK 142
           QPAEATVYLERAISK
Sbjct: 442 QPAEATVYLERAISK 456

[Close]
BLAST of Cucsa.277800 vs. NCBI nr
Match: gi|645223004|ref|XP_008218424.1| (PREDICTED: ALBINO3-like protein 2, chloroplastic [Prunus mume])

HSP 1 Score: 149.1 bits (375), Expect = 6.0e-33
Identity = 76/135 (56.30%), Postives = 97/135 (71.85%), Query Frame = 1 

Query: 7   PPVKFAYFVKLIFTSILQQLTLQHPAVRSKLGLPSRDAPVGTTTLRETNNPGKIPLETTT 66
           P     Y+V     S++QQL L+ PAVR+KLGLP +DAP  T    +   P   PL + T
Sbjct: 302 PQGSLVYWVTNSSLSVIQQLVLRDPAVRAKLGLPDKDAPTDTAISEKPGTPEISPLASPT 361

Query: 67  KWKKISVEKLSPKELLALSVQLLSKGQKEKAIPLLRQALNKEPEYVRALVVMGQTLLQNA 126
           +WKKI+++ LSPKELL LSVQ+LS+G KEKA+PLL+ AL K+PEY RAL+VMGQTLLQ +
Sbjct: 362 RWKKITLQNLSPKELLNLSVQVLSEGDKEKALPLLKLALEKDPEYARALIVMGQTLLQKS 421

Query: 127 QPAEATVYLERAISK 142
             AEAT Y +RAI+K
Sbjct: 422 LHAEATEYFQRAITK 436

The following BLAST results are available for this feature:
BLAST of Cucsa.277800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ALB32_ARATH1.7e-2448.89ALBINO3-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=ALB3L2 PE=2 SV=... [more]
ALB33_ARATH3.1e-2144.93ALBINO3-like protein 3, mitochondrial OS=Arabidopsis thaliana GN=ALB3L3 PE=2 SV=... [more]
BLAST of Cucsa.277800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHD0_CUCSA1.5e-5989.36Uncharacterized protein OS=Cucumis sativus GN=Csa_2G094360 PE=4 SV=1[more]
M5WAE5_PRUPE1.6e-3255.56Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003958mg PE=4 SV=1[more]
B9RFU8_RICCO5.3e-2852.59Cytochrome oxidase biogenesis protein, putative OS=Ricinus communis GN=RCOM_1437... [more]
A0A061EYU4_THECC5.8e-2750.36Membrane insertion protein, putative isoform 3 OS=Theobroma cacao GN=TCM_025341 ... [more]
A0A061EXZ7_THECC5.8e-2750.36Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain, puta... [more]
BLAST of Cucsa.277800 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G65080.19.8e-2648.89 Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat ... [more]
AT3G44370.11.7e-2244.93 Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat ... [more]
BLAST of Cucsa.277800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206226|gb|KGN61345.1|2.2e-5989.36hypothetical protein Csa_2G094360 [Cucumis sativus][more]
gi|449442253|ref|XP_004138896.1|7.0e-5889.63PREDICTED: ALBINO3-like protein 2, chloroplastic [Cucumis sativus][more]
gi|659082283|ref|XP_008441760.1|2.8e-5483.70PREDICTED: ALBINO3-like protein 2, chloroplastic isoform X2 [Cucumis melo][more]
gi|659082281|ref|XP_008441758.1|2.8e-5483.70PREDICTED: ALBINO3-like protein 2, chloroplastic isoform X1 [Cucumis melo][more]
gi|645223004|ref|XP_008218424.1|6.0e-3356.30PREDICTED: ALBINO3-like protein 2, chloroplastic [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001708YidC/ALB3/OXA1/COX18
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0051205protein insertion into membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051205 protein insertion into membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.277800.1Cucsa.277800.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001708Membrane insertase OXA1/ALB3/YidCPANTHERPTHR12428OXA1coord: 21..116
score: 6.5
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 77..139
score: 2.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 80..140
score: 5.2
IPR013026Tetratricopeptide repeat-containing domainPROFILEPS50293TPR_REGIONcoord: 78..141
score: 12
NoneNo IPR availablePANTHERPTHR12428:SF22ALBINO3-LIKE PROTEIN 2, CHLOROPLASTIC-RELATEDcoord: 21..116
score: 6.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.277800Csa2G094360Cucumber (Chinese Long) v2cgycuB396
Cucsa.277800MELO3C008585Melon (DHL92) v3.5.1cgymeB464
Cucsa.277800CSPI02G07990Wild cucumber (PI 183967)cgycpiB419
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None