Cucsa.277570 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.277570
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	MYB transcription factor
Location	scaffold02604 : 2699 .. 6300 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGGCATTGCTTGGACTGAAGAAGAAGATTACTTACTCAAGAAATGCATTGAACAATATGGAGAAGGGAAATGGCATCGTGTTCCTCAATTGGCTGGTTTGTTTCATTTTGCTTTTTCTACCTTTCATAGTTGCTTTATTTATATTTTTGTCTTTATAGTTTTCTATATAAACTCACTGATTTCCATGTTTGATCATAACAAGATAAAATGGTGATTTCATCACTTCAAAATTTCCGAGTTTAGTTTGAGTGGTATATTACTTGCTATATGGTTTATGCTCGTATCATTAATTCAAATTTTCAAAAAAAaaTTGTGAGTACCTACTCTCAATTGAAACATAGATTTTTTCGTTGTTAATTAATACATTCACATGTTAGCTAAGCTAGGATGACTTTGGCACAACAATTTTACTATATTAGTTACTATTGATAATATTTTTCTATAGTTGCGTCTAGTTGTCAAGAAACTCGAAAAAGAAAATGAAAAAAATTACTAAATTTTTCAATTTTAAAATTCTAGGTGTATAAATTTCACTAATATTCAAAGAAGATAGTATGTTCAAATAATATTTTGAAATGAATGAATATGTAAACAGCTAAATGGATTTCCATATACTGAAATCTGAGCTTCTGAAACTATACTTTTCTTTTGAATGCATTAATACAAAGTTAGCATATTGACGTACTTACATTTATTAGCACAAATTTATAAAAAAaTGTTAGGTAAAAaaAAaTATATAGATAGGTTTTATAGCCATTTTATAAAAaTAATAATATAAAATCTTGATATACTTAAAAATACATCCATTTTAGTATGTCATTCAGTAAAGATATTCTAGTTTATATTCACATGTATTGGAAATGCTATGGACATTTAACTATACAGTGCTTTTAAAAAAAGTGAAGAGTCAAGTTGAATTTGAAAAACCAATCTTAGGTCGAAACCCCTCTCGATATCAATTTCATCATTTGTTAAAATTACCAATAACTAATCGAGGTCATTAAATGACAACTAAAGACAGGTGATCGATCTTCTACAAAATTGATAATTTGAATAATTGAGTTAGAAACATTTCTCAATCCAATCTAGACGAACTCGTGAACAATCTACTTCAAAAGATATTAATAAAACATTGAAATTGAGAGTTTCATAAATGTCATTGAATTTAGAAACAAGGGCAGATAATAGAGATGGTCCTCCAAAAAAaCAAAGATGCAATGATGCACATGTGTGTCACCTACCTGTTAGCTTTGAATGCTGCATGTGGTGTGTGTATAATTTTGCATTGTCTATTTTAGGCATTTCTTTAAACACTTTATGAACTTGAGTTTGCATTTTGGTCACATTTAGGGAGCTAGCTATTTTTATCTATGTTTATTTAGACCATATGTTGTGAACATATGGGGCTAATGATAGTACCAAAGAAGAAAACGATGTTTTAAATATAGTTGGTGGCACTGTTTTTCAAACCTCACCATCAACCATTATTACTGCTTACTGTTTAAATCAAGGGTTAGGTTGAGAAAATAAACTTAAGAGGAAGAATTGGGTAAGTTATAAATTCTGAAAGTTTTTTCTTTCTTTTGTCCTAACTTCAAAGAAAATATATACTAATTATAATTTTTGAACTTTCATTTGAGTCTACTTAAAGTTGATCACGTTATTATTATATTGAAATGTTTTAGGTGATATCGTTGATTGAACAAAAACTCGATATACTTCACAACCATATTGTATAAAGTTATCATACATAAATTAAGTATAAAATATTAGAAGAATGAATTGGGAGAAAAAAAAaaTAATGAGACAAATATATACATTTACTATATCCTTTAGGTTTAGACCCTACTTTAGTCTTTGTATTTTCCACATTCATGTACTTTCGTAATATCTATTGTGTCCACCCTTGAGGCTGGCCCCTCAATATGGTTGCTTGATCTTAAAGATTGGCCATGAGTGATTGAATGATGGTTAAATCTGTACTTAAAATCCATCAAGTTACTAAACTAAGAAAATGGATACTTTATATTTTTAACTCGCAAATAGATCAATTAATTTTTtATAAAAAAaTCTACATGTCAAGAGACATGACTGAACATCAAATTCAAAGGTGTATTAGACATTTTTGAAGTTTTTTTCAATATCCGTGAATGTCCGGACCAATTTACGCCCACCACGACTAATCTTATGTGACAAGTGTGATCCTACAACATTTAGATGTCAAGAAAAATTCGTAGAGATGTAAATTTTAGGTAGGTGGCATATGAATTGAATCCAAAGCCTTAGTTAATGATATAGAATAGAAAATTAAAAGTTGATGAAACTAAATTTGTGATTAAAATTTTTCTAAACCAAGTTTTTGAACAAAAAAaaTTCAAGATCTTATCACTACTCATGATCCATCCTATGGATGGGTTTTTGAAGTTAAATCCATAAGCATTGGTTTGTGTGTGAGTTGAATTGATTATGAGTTCAAAGAAATATCTATAAGTTAGTTGGTGTAAGAAGATTTTAGTTGTTTTTATGGTATAGTTTTTAAGAACTGATGGAAGTTAATTAGTGTGATTTTGGTGATTGTGAAAAAGGTTTAAACAGATGCAGAAAGAGTTGTAGACTAAGATGGTTAAATTACCTTCGTCCAAATATCAAAAGAGGAAGCTTTACACCACAAGAAGTTGACCTCATTCTTAACCTTCACAATATCCTCGGCAACAGGCAAGCTATAGAAAATTTTTAGATTCTATCACTTGATATAAACTGATAAACTTCTGTCACTGTCTATCAATATTACTAATAGAAACATATAATTGTCTATTAATGTTTATTATTGATAAAATCTAACGTTTGTTTTTGTCATTTTCCCTTCTTTTAAAATTAGAGTTATTTTTTGATTGTGCTATAATGTTTCACTTGAGGCTTCCTTTCAAATACACTATCATATCAACAAAATAGTAAACTATATAAGTATTATTGAAAATCTTATCCTATCATGGGTTAAGCTTTCACCCATAGATCAGGCTACCAATCAAATAAATTTGTTGTGATTCATATATGAGTAGTCTATTGCTATAGATTTCAATCGGACAACTTAAACATTTTATATGAGTTGAATAAAGTTAGCAAAATTTGAAATTTTTTTGAACTTATAGATGTTAGTACACATTTTTTATGGTTGTTATGTTTTAATTTGCAACTGTCTCTTTGGTTTTTGCCATGTTAGGTGGTCAATTATTGCAGGAAGATTGCCAGGAAGAACAGCAAACGACATAAAGAACTATTGGAATTGTCATTTGAGCAAAAAGTTGAATGGTCAGGGAGTTGAGAAGCCAAATTCCACCAAAGAAGGATCCAATTTTGGGAAACAGTCGAAGTGGAAGCCACTTCAAGAAGAAAGCAGCAAATCGAAAGGAAAAGAATACGTTGATGATGATCAAAATAATGAAAGCCAAGGAATATTGGTACAAAATAATCAGAATCAAAATACACAACCAATTGTTGTTGAACAAAATAGTAGCATGAGTTTAGGAAATATGCAAATGGACTTATTCCAATTTGATCAACAAGTGCTCAAAGCAATGGAGgATGAAGATGGCTGCA

mRNA sequence

ATGGGAGGCATTGCTTGGACTGAAGAAGAAGATTACTTACTCAAGAAATGCATTGAACAATATGGAGAAGGGAAATGGCATCGTGTTCCTCAATTGGCTGGTTTAAACAGATGCAGAAAGAGTTGTAGACTAAGATGGTTAAATTACCTTCGTCCAAATATCAAAAGAGGAAGCTTTACACCACAAGAAGTTGACCTCATTCTTAACCTTCACAATATCCTCGGCAACAGGTGGTCAATTATTGCAGGAAGATTGCCAGGAAGAACAGCAAACGACATAAAGAACTATTGGAATTGTCATTTGAGCAAAAAGTTGAATGGTCAGGGAGTTGAGAAGCCAAATTCCACCAAAGAAGGATCCAATTTTGGGAAACAGTCGAAGTGGAAGCCACTTCAAGAAGAAAGCAGCAAATCGAAAGGAAAAGAATACGTTGATGATGATCAAAATAATGAAAGCCAAGGAATATTGGTACAAAATAATCAGAATCAAAATACACAACCAATTGTTGTTGAACAAAATAGTAGCATGAGTTTAGGAAATATGCAAATGGACTTATTCCAATTTGATCAACAAGTGCTCAAAGCAATGGAGGATGAAGATGGCTGCA

Coding sequence (CDS)

ATGGGAGGCATTGCTTGGACTGAAGAAGAAGATTACTTACTCAAGAAATGCATTGAACAATATGGAGAAGGGAAATGGCATCGTGTTCCTCAATTGGCTGGTTTAAACAGATGCAGAAAGAGTTGTAGACTAAGATGGTTAAATTACCTTCGTCCAAATATCAAAAGAGGAAGCTTTACACCACAAGAAGTTGACCTCATTCTTAACCTTCACAATATCCTCGGCAACAGGTGGTCAATTATTGCAGGAAGATTGCCAGGAAGAACAGCAAACGACATAAAGAACTATTGGAATTGTCATTTGAGCAAAAAGTTGAATGGTCAGGGAGTTGAGAAGCCAAATTCCACCAAAGAAGGATCCAATTTTGGGAAACAGTCGAAGTGGAAGCCACTTCAAGAAGAAAGCAGCAAATCGAAAGGAAAAGAATACGTTGATGATGATCAAAATAATGAAAGCCAAGGAATATTGGTACAAAATAATCAGAATCAAAATACACAACCAATTGTTGTTGAACAAAATAGTAGCATGAGTTTAGGAAATATGCAAATGGACTTATTCCAATTTGATCAACAAGTGCTCAAAGCAATGGAGgATGAAGATGGCTGCA

Protein sequence

MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFTPQEVDLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGSNFGKQSKWKPLQEESSKSKGKEYVDDDQNNESQGILVQNNQNQNTQPIVVEQNSSMSLGNMQMDLFQFDQQVLKAMEDEDGCX

Homology

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BLAST of Cucsa.277570 vs. Swiss-Prot
Match: MY114_ARATH (Transcription factor MYB114 OS=Arabidopsis thaliana GN=MYB114 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.9e-44
Identity = 78/100 (78.00%), Postives = 89/100 (89.00%), Query Frame = 1


Query: 5   AWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFTPQEV 64
           AWT EED LL++CI +YGEGKWH+VP  AGLNRCRKSCRLRWLNYL+P+IKRG F+  EV
Sbjct: 12  AWTAEEDSLLRQCIGKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGKFSSDEV 71

Query: 65  DLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKK 105
           DL+L LH +LGNRWS+IAGRLPGRTAND+KNYWN HLSKK
Sbjct: 72  DLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111

[Close]

BLAST of Cucsa.277570 vs. Swiss-Prot
Match: MYB75_ARATH (Transcription factor MYB75 OS=Arabidopsis thaliana GN=MYB75 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.4e-43
Identity = 77/100 (77.00%), Postives = 88/100 (88.00%), Query Frame = 1


Query: 5   AWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFTPQEV 64
           AWT EED LL++CI +YGEGKWH+VP  AGLNRCRKSCRLRWLNYL+P+IKRG  +  EV
Sbjct: 12  AWTTEEDSLLRQCINKYGEGKWHQVPVRAGLNRCRKSCRLRWLNYLKPSIKRGKLSSDEV 71

Query: 65  DLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKK 105
           DL+L LH +LGNRWS+IAGRLPGRTAND+KNYWN HLSKK
Sbjct: 72  DLLLRLHRLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111

[Close]

BLAST of Cucsa.277570 vs. Swiss-Prot
Match: MY113_ARATH (Transcription factor MYB113 OS=Arabidopsis thaliana GN=MYB113 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.4e-43
Identity = 76/99 (76.77%), Postives = 86/99 (86.87%), Query Frame = 1


Query: 6   WTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFTPQEVD 65
           WT EED LL++CI++YGEGKWHRVP   GLNRCRKSCRLRWLNYL+P+IKRG     EVD
Sbjct: 13  WTTEEDILLRQCIDKYGEGKWHRVPLRTGLNRCRKSCRLRWLNYLKPSIKRGKLCSDEVD 72

Query: 66  LILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKK 105
           L+L LH +LGNRWS+IAGRLPGRTAND+KNYWN HLSKK
Sbjct: 73  LVLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111

[Close]

BLAST of Cucsa.277570 vs. Swiss-Prot
Match: MYB90_ARATH (Transcription factor MYB90 OS=Arabidopsis thaliana GN=MYB90 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.2e-43
Identity = 77/100 (77.00%), Postives = 88/100 (88.00%), Query Frame = 1


Query: 5   AWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFTPQEV 64
           AWT EED LL+ CI++YGEGKWH+VP  AGLNRCRKSCRLRWLNYL+P+IKRG  +  EV
Sbjct: 12  AWTAEEDSLLRLCIDKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGRLSNDEV 71

Query: 65  DLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKK 105
           DL+L LH +LGNRWS+IAGRLPGRTAND+KNYWN HLSKK
Sbjct: 72  DLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111

[Close]

BLAST of Cucsa.277570 vs. Swiss-Prot
Match: MYB1R_BETVU (Transcription factor MYB1 OS=Beta vulgaris GN=MYB1 PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.1e-38
Identity = 80/168 (47.62%), Postives = 105/168 (62.50%), Query Frame = 1


Query: 5   AWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFTPQEV 64
           +W++EED LL+KCI++YGEG W RVP+ AGLNRCRKSCR RWLNYL+P+IKRG F   EV
Sbjct: 18  SWSDEEDDLLRKCIQKYGEGNWKRVPERAGLNRCRKSCRWRWLNYLKPSIKRGHFNEDEV 77

Query: 65  DLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNST-------- 124
             I+  H +LGNRWS+IA +LPGRT ND+KNY N HL KK + + +  P +         
Sbjct: 78  KFIIQQHKLLGNRWSLIAAKLPGRTINDVKNYCNTHLYKKHSIENIPAPATNTMTHNTSS 137

Query: 125 ----KEGSNFGKQSKW-------KPLQEESSKSKGKEYVDDDQNNESQ 154
                E S   K+ KW          +E+  KS+    +D +Q+N  Q
Sbjct: 138 CVDRPESSATIKEPKWWENILVELQREEKEGKSQNCSGLDFEQDNLGQ 185

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BLAST of Cucsa.277570 vs. TrEMBL
Match: A0A061F261_THECC (Myb domain protein 113, putative OS=Theobroma cacao GN=TCM_026054 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.1e-54
Identity = 116/216 (53.70%), Postives = 143/216 (66.20%), Query Frame = 1


Query: 1   MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFT 60
           MGG+AWTEEED+LLKKCIEQYGEGKWHRVP LAGLNRCRKSCRLRWLNYLRPNIKRGSF 
Sbjct: 1   MGGVAWTEEEDHLLKKCIEQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYLRPNIKRGSFA 60

Query: 61  PQEVDLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLN-GQGVEKPNST--- 120
            +EV LI+ LH +LGNRWS+IAGRLPGRTAND+KNYWNCHLSKKLN GQ  E+  +    
Sbjct: 61  KEEVQLIIKLHRLLGNRWSLIAGRLPGRTANDVKNYWNCHLSKKLNIGQETEEKENAINA 120

Query: 121 ----KEGSNFGKQSKWKPLQEESSKSKGKEYVDDDQNNESQGILVQNNQNQNTQPIVVEQ 180
               + G N       KP  ++   +      +   +     + V     Q  Q +V E+
Sbjct: 121 VIRPQPGGN-ATTGSVKPRSQDIVPNSQLTIEESSMSTPFHFVEVA----QQGQELVKEE 180

Query: 181 NSSMS------LGNMQMDLFQFDQQVLKAMEDEDGC 203
           +SS+       LG+M+ D+ QF +  L  +  ++GC
Sbjct: 181 DSSLGVEEPGILGDMRTDIGQFHE--LNILSTDEGC 209

[Close]

BLAST of Cucsa.277570 vs. TrEMBL
Match: A0A142D8G1_9CARY (Myb transcription factor 5 (Fragment) OS=Silene littorea PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 8.9e-53
Identity = 101/179 (56.42%), Postives = 131/179 (73.18%), Query Frame = 1


Query: 1   MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFT 60
           MGG+AW+EEED+LL+KCIEQYGEGKWHR+P LAG+NRCRKSCRLRWLNYLRPNI+RG FT
Sbjct: 1   MGGVAWSEEEDHLLRKCIEQYGEGKWHRIPLLAGINRCRKSCRLRWLNYLRPNIRRGKFT 60

Query: 61  PQEVDLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGS 120
            +EV+LI+ LHN+LGNRWS+IAGRLPGRTAND+KNYW+CHLSK+LN   ++  N+     
Sbjct: 61  DEEVELIIKLHNLLGNRWSLIAGRLPGRTANDVKNYWHCHLSKRLNSNILKTTNNNIIMK 120

Query: 121 NFGKQSK-----WKPLQEESSKSKGKEYVDDDQNNESQGILVQNNQNQNTQPIVVEQNS 175
           N  +Q +          +E ++S+ +++V + + N S          +   P VVE NS
Sbjct: 121 NSTRQEEVMLMTSSSTNKEKAESRTQDHVIEFETNVS--------SKEEIAPCVVEDNS 171

[Close]

BLAST of Cucsa.277570 vs. TrEMBL
Match: A0A059B607_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04157 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.2e-52
Identity = 94/110 (85.45%), Postives = 105/110 (95.45%), Query Frame = 1


Query: 1   MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFT 60
           MGG+AWTEEED+LLK+CIEQYGEGKW RVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFT
Sbjct: 1   MGGVAWTEEEDHLLKRCIEQYGEGKWRRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFT 60

Query: 61  PQEVDLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGV 111
            +EVDLI+ LH++LGNRWS+IAGRLPGRTAND+KNYWNCHLSKKL+ Q +
Sbjct: 61  EEEVDLIIQLHSLLGNRWSLIAGRLPGRTANDVKNYWNCHLSKKLDPQQI 110

[Close]

BLAST of Cucsa.277570 vs. TrEMBL
Match: A0A0B2PC47_GLYSO (Transcription factor MYB113 OS=Glycine soja GN=glysoja_034950 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.5e-52
Identity = 106/200 (53.00%), Postives = 132/200 (66.00%), Query Frame = 1


Query: 1   MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFT 60
           MGG+AWTEEED+LLKKCI+QYGEGKWHRVP LAGLNRCRKSCRLRWLNYLRPNIKRG+F 
Sbjct: 1   MGGVAWTEEEDHLLKKCIQQYGEGKWHRVPILAGLNRCRKSCRLRWLNYLRPNIKRGNFA 60

Query: 61  PQEVDLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGS 120
            +EV++I+ LH +LGNRWS+IAGRLPGRTAND+KNYWNCHLSK+LN    E    T++  
Sbjct: 61  EEEVEMIIKLHKLLGNRWSLIAGRLPGRTANDVKNYWNCHLSKRLNALEAEDRPITRDVQ 120

Query: 121 NFGKQSKWKPLQEESSKSKGKEYVDDDQNNESQGILVQNNQNQNTQPIVVEQNSSMSLGN 180
               Q +                     N  S  +  +  QN++     V+Q SSMS  +
Sbjct: 121 VIRPQPR---------------------NIGSSSVKRRGGQNESATDKGVQQESSMS--S 177

Query: 181 MQMDLFQFDQQVLKAMEDED 201
           +  D       +L++ +D D
Sbjct: 181 LTFDASDGQNHMLESQQDND 177

[Close]

BLAST of Cucsa.277570 vs. TrEMBL
Match: I1KK72_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G141100 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.5e-52
Identity = 106/200 (53.00%), Postives = 132/200 (66.00%), Query Frame = 1


Query: 1   MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFT 60
           MGG+AWTEEED+LLKKCI+QYGEGKWHRVP LAGLNRCRKSCRLRWLNYLRPNIKRG+F 
Sbjct: 1   MGGVAWTEEEDHLLKKCIQQYGEGKWHRVPILAGLNRCRKSCRLRWLNYLRPNIKRGNFA 60

Query: 61  PQEVDLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGS 120
            +EV++I+ LH +LGNRWS+IAGRLPGRTAND+KNYWNCHLSK+LN    E    T++  
Sbjct: 61  EEEVEMIIKLHKLLGNRWSLIAGRLPGRTANDVKNYWNCHLSKRLNALEAEDRPITRDVQ 120

Query: 121 NFGKQSKWKPLQEESSKSKGKEYVDDDQNNESQGILVQNNQNQNTQPIVVEQNSSMSLGN 180
               Q +                     N  S  +  +  QN++     V+Q SSMS  +
Sbjct: 121 VIRPQPR---------------------NIGSSSVKRRGGQNESATDKGVQQESSMS--S 177

Query: 181 MQMDLFQFDQQVLKAMEDED 201
           +  D       +L++ +D D
Sbjct: 181 LTFDASDGQNHMLESQQDND 177

[Close]

BLAST of Cucsa.277570 vs. TAIR10
Match: AT1G66380.1 (AT1G66380.1 myb domain protein 114)

HSP 1 Score: 179.1 bits (453), Expect = 2.7e-45
Identity = 78/100 (78.00%), Postives = 89/100 (89.00%), Query Frame = 1


Query: 5   AWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFTPQEV 64
           AWT EED LL++CI +YGEGKWH+VP  AGLNRCRKSCRLRWLNYL+P+IKRG F+  EV
Sbjct: 12  AWTAEEDSLLRQCIGKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGKFSSDEV 71

Query: 65  DLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKK 105
           DL+L LH +LGNRWS+IAGRLPGRTAND+KNYWN HLSKK
Sbjct: 72  DLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111

[Close]

BLAST of Cucsa.277570 vs. TAIR10
Match: AT1G56650.1 (AT1G56650.1 production of anthocyanin pigment 1)

HSP 1 Score: 177.6 bits (449), Expect = 8.0e-45
Identity = 77/100 (77.00%), Postives = 88/100 (88.00%), Query Frame = 1


Query: 5   AWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFTPQEV 64
           AWT EED LL++CI +YGEGKWH+VP  AGLNRCRKSCRLRWLNYL+P+IKRG  +  EV
Sbjct: 12  AWTTEEDSLLRQCINKYGEGKWHQVPVRAGLNRCRKSCRLRWLNYLKPSIKRGKLSSDEV 71

Query: 65  DLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKK 105
           DL+L LH +LGNRWS+IAGRLPGRTAND+KNYWN HLSKK
Sbjct: 72  DLLLRLHRLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111

[Close]

BLAST of Cucsa.277570 vs. TAIR10
Match: AT1G66370.1 (AT1G66370.1 myb domain protein 113)

HSP 1 Score: 176.8 bits (447), Expect = 1.4e-44
Identity = 76/99 (76.77%), Postives = 86/99 (86.87%), Query Frame = 1


Query: 6   WTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFTPQEVD 65
           WT EED LL++CI++YGEGKWHRVP   GLNRCRKSCRLRWLNYL+P+IKRG     EVD
Sbjct: 13  WTTEEDILLRQCIDKYGEGKWHRVPLRTGLNRCRKSCRLRWLNYLKPSIKRGKLCSDEVD 72

Query: 66  LILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKK 105
           L+L LH +LGNRWS+IAGRLPGRTAND+KNYWN HLSKK
Sbjct: 73  LVLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111

[Close]

BLAST of Cucsa.277570 vs. TAIR10
Match: AT1G66390.1 (AT1G66390.1 myb domain protein 90)

HSP 1 Score: 176.4 bits (446), Expect = 1.8e-44
Identity = 77/100 (77.00%), Postives = 88/100 (88.00%), Query Frame = 1


Query: 5   AWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFTPQEV 64
           AWT EED LL+ CI++YGEGKWH+VP  AGLNRCRKSCRLRWLNYL+P+IKRG  +  EV
Sbjct: 12  AWTAEEDSLLRLCIDKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGRLSNDEV 71

Query: 65  DLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKK 105
           DL+L LH +LGNRWS+IAGRLPGRTAND+KNYWN HLSKK
Sbjct: 72  DLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111

[Close]

BLAST of Cucsa.277570 vs. TAIR10
Match: AT1G22640.1 (AT1G22640.1 myb domain protein 3)

HSP 1 Score: 158.3 bits (399), Expect = 5.0e-39
Identity = 69/111 (62.16%), Postives = 91/111 (81.98%), Query Frame = 1


Query: 5   AWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFTPQEV 64
           AWT+EED LL   I ++GEG W  +P+ AGL RC KSCRLRW+NYLRP++KRG+FT +E 
Sbjct: 16  AWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMNYLRPDLKRGNFTEEED 75

Query: 65  DLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNS 116
           +LI+ LH++LGN+WS+IAGRLPGRT N+IKNYWN H+ +KL  +G++ PNS
Sbjct: 76  ELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSRGID-PNS 125

[Close]

BLAST of Cucsa.277570 vs. NCBI nr
Match: gi|449442413|ref|XP_004138976.1| (PREDICTED: transcription factor MYB1-like [Cucumis sativus])

HSP 1 Score: 426.0 bits (1094), Expect = 3.6e-116
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1


Query: 1   MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFT 60
           MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFT
Sbjct: 1   MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFT 60

Query: 61  PQEVDLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGS 120
           PQEVDLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGS
Sbjct: 61  PQEVDLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGS 120

Query: 121 NFGKQSKWKPLQEESSKSKGKEYVDDDQNNESQGILVQNNQNQNTQPIVVEQNSSMSLGN 180
           NFGKQSKWKPLQEESSKSKGKEYVDDDQNNESQGILVQNNQNQNTQPIVVEQNSSMSLGN
Sbjct: 121 NFGKQSKWKPLQEESSKSKGKEYVDDDQNNESQGILVQNNQNQNTQPIVVEQNSSMSLGN 180

Query: 181 MQMDLFQFDQQVLKAMEDEDGC 203
           MQMDLFQFDQQVLKAMEDEDGC
Sbjct: 181 MQMDLFQFDQQVLKAMEDEDGC 202

[Close]

BLAST of Cucsa.277570 vs. NCBI nr
Match: gi|659082379|ref|XP_008441809.1| (PREDICTED: transcription factor MYB90-like [Cucumis melo])

HSP 1 Score: 397.5 bits (1020), Expect = 1.4e-107
Identity = 192/204 (94.12%), Postives = 196/204 (96.08%), Query Frame = 1


Query: 1   MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFT 60
           MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFT
Sbjct: 1   MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFT 60

Query: 61  PQEVDLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQGVEKPNSTKEGS 120
           PQEVDLILNLHN+LGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQ VEKPNS K+GS
Sbjct: 61  PQEVDLILNLHNLLGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLNGQVVEKPNSIKQGS 120

Query: 121 NFGKQSKWKPLQEESSKSKGKEYVDDD--QNNESQGILVQNNQNQNTQPIVVEQNSSMSL 180
            FGK SKWKPLQEESSKSKGKEYVDDD   NNESQGILV+NNQNQNT PIV+EQNSSMSL
Sbjct: 121 IFGKPSKWKPLQEESSKSKGKEYVDDDDQNNNESQGILVENNQNQNT-PIVIEQNSSMSL 180

Query: 181 GNMQMDLFQFDQQVLKAMEDEDGC 203
           GNMQMDLFQFDQQVLKAMEDEDGC
Sbjct: 181 GNMQMDLFQFDQQVLKAMEDEDGC 203

[Close]

BLAST of Cucsa.277570 vs. NCBI nr
Match: gi|590641507|ref|XP_007030250.1| (Myb domain protein 113, putative [Theobroma cacao])

HSP 1 Score: 220.3 bits (560), Expect = 3.0e-54
Identity = 116/216 (53.70%), Postives = 143/216 (66.20%), Query Frame = 1


Query: 1   MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFT 60
           MGG+AWTEEED+LLKKCIEQYGEGKWHRVP LAGLNRCRKSCRLRWLNYLRPNIKRGSF 
Sbjct: 1   MGGVAWTEEEDHLLKKCIEQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYLRPNIKRGSFA 60

Query: 61  PQEVDLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLN-GQGVEKPNST--- 120
            +EV LI+ LH +LGNRWS+IAGRLPGRTAND+KNYWNCHLSKKLN GQ  E+  +    
Sbjct: 61  KEEVQLIIKLHRLLGNRWSLIAGRLPGRTANDVKNYWNCHLSKKLNIGQETEEKENAINA 120

Query: 121 ----KEGSNFGKQSKWKPLQEESSKSKGKEYVDDDQNNESQGILVQNNQNQNTQPIVVEQ 180
               + G N       KP  ++   +      +   +     + V     Q  Q +V E+
Sbjct: 121 VIRPQPGGN-ATTGSVKPRSQDIVPNSQLTIEESSMSTPFHFVEVA----QQGQELVKEE 180

Query: 181 NSSMS------LGNMQMDLFQFDQQVLKAMEDEDGC 203
           +SS+       LG+M+ D+ QF +  L  +  ++GC
Sbjct: 181 DSSLGVEEPGILGDMRTDIGQFHE--LNILSTDEGC 209

[Close]

BLAST of Cucsa.277570 vs. NCBI nr
Match: gi|1021506567|ref|XP_016196641.1| (PREDICTED: transcription factor MYB113-like isoform X2 [Arachis ipaensis])

HSP 1 Score: 216.5 bits (550), Expect = 4.4e-53
Identity = 115/227 (50.66%), Postives = 149/227 (65.64%), Query Frame = 1


Query: 1   MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFT 60
           MGG+AWTEEED+LLKKCI+QYGEGKWHRVP LAGLNRCRKSCRLRWLNYLRPNIKRG+F 
Sbjct: 1   MGGVAWTEEEDHLLKKCIQQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYLRPNIKRGNFA 60

Query: 61  PQEVDLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLNG-QGVEKPNSTK-- 120
            +EV++I+ LH +LGNRWS+IAGRLPGRTAND+KNYWNCHLSKKLN  +G E+  +TK  
Sbjct: 61  EEEVEMIVKLHKLLGNRWSLIAGRLPGRTANDVKNYWNCHLSKKLNAMEGEERSQATKNV 120

Query: 121 -----EGSNFGKQSKWK---PLQEESSK------------SKGKEYVDDDQNNESQGILV 180
                +  N G  S  K    +Q ESS             S     +  D + +S   ++
Sbjct: 121 EVIRPQARNIGTSSSMKRRRGIQGESSSPIESDLLAQQEISGMSSTMSFDADGQSHHNML 180

Query: 181 QNNQNQNTQPIVVEQNSSMSLGNMQMDLFQFD---QQVLKAMEDEDG 202
           ++    N    + +Q+    +G + MD F+F+   ++++ A E   G
Sbjct: 181 ESQLENNIYSCLEQQD---IVGELPMD-FRFEGGVEEIINAGEGSSG 223

[Close]

BLAST of Cucsa.277570 vs. NCBI nr
Match: gi|1012114514|ref|XP_015960816.1| (PREDICTED: transcription factor MYB113-like isoform X2 [Arachis duranensis])

HSP 1 Score: 215.3 bits (547), Expect = 9.8e-53
Identity = 114/227 (50.22%), Postives = 149/227 (65.64%), Query Frame = 1


Query: 1   MGGIAWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYLRPNIKRGSFT 60
           MGG+AWTEEED+LLKKCI+QYGEGKWHRVP LAGLNRCRKSCRLRWLNYLRPNIKRG+F 
Sbjct: 1   MGGVAWTEEEDHLLKKCIQQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYLRPNIKRGNFA 60

Query: 61  PQEVDLILNLHNILGNRWSIIAGRLPGRTANDIKNYWNCHLSKKLNG-QGVEKPNSTK-- 120
            +EV++I+ LH +LGNRWS+IAGRLPGRTAND+KNYWNCHLSKKLN  +G ++  +TK  
Sbjct: 61  EEEVEMIVKLHKLLGNRWSLIAGRLPGRTANDVKNYWNCHLSKKLNAMEGEDRSQATKNV 120

Query: 121 -----EGSNFGKQSKWK---PLQEESSK------------SKGKEYVDDDQNNESQGILV 180
                +  N G  S  K    +Q ESS             S     +  D + +S   ++
Sbjct: 121 EVIRPQARNIGTSSSMKRRRGIQGESSSPIESDLLAQQEISGMSSTMSFDADGQSHHNML 180

Query: 181 QNNQNQNTQPIVVEQNSSMSLGNMQMDLFQFD---QQVLKAMEDEDG 202
           ++    N    + +Q+    +G + MD F+F+   ++++ A E   G
Sbjct: 181 ESQLENNIYSCLEQQD---IVGELPMD-FRFEGGVEEIINAGEGSSG 223

The following BLAST results are available for this feature:

BLAST of Cucsa.277570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MY114_ARATH	4.9e-44	78.00	Transcription factor MYB114 OS=Arabidopsis thaliana GN=MYB114 PE=1 SV=1	[more]
MYB75_ARATH	1.4e-43	77.00	Transcription factor MYB75 OS=Arabidopsis thaliana GN=MYB75 PE=1 SV=1	[more]
MY113_ARATH	2.4e-43	76.77	Transcription factor MYB113 OS=Arabidopsis thaliana GN=MYB113 PE=1 SV=1	[more]
MYB90_ARATH	3.2e-43	77.00	Transcription factor MYB90 OS=Arabidopsis thaliana GN=MYB90 PE=1 SV=1	[more]
MYB1R_BETVU	3.1e-38	47.62	Transcription factor MYB1 OS=Beta vulgaris GN=MYB1 PE=1 SV=1	[more]

BLAST of Cucsa.277570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061F261_THECC	2.1e-54	53.70	Myb domain protein 113, putative OS=Theobroma cacao GN=TCM_026054 PE=4 SV=1	[more]
A0A142D8G1_9CARY	8.9e-53	56.42	Myb transcription factor 5 (Fragment) OS=Silene littorea PE=2 SV=1	[more]
A0A059B607_EUCGR	1.2e-52	85.45	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04157 PE=4 SV=1	[more]
A0A0B2PC47_GLYSO	1.5e-52	53.00	Transcription factor MYB113 OS=Glycine soja GN=glysoja_034950 PE=4 SV=1	[more]
I1KK72_SOYBN	1.5e-52	53.00	Uncharacterized protein OS=Glycine max GN=GLYMA_07G141100 PE=4 SV=1	[more]

BLAST of Cucsa.277570 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G66380.1	2.7e-45	78.00	myb domain protein 114	[more]
AT1G56650.1	8.0e-45	77.00	production of anthocyanin pigment 1	[more]
AT1G66370.1	1.4e-44	76.77	myb domain protein 113	[more]
AT1G66390.1	1.8e-44	77.00	myb domain protein 90	[more]
AT1G22640.1	5.0e-39	62.16	myb domain protein 3	[more]

BLAST of Cucsa.277570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442413\|ref\|XP_004138976.1\|	3.6e-116	100.00	PREDICTED: transcription factor MYB1-like [Cucumis sativus]	[more]
gi\|659082379\|ref\|XP_008441809.1\|	1.4e-107	94.12	PREDICTED: transcription factor MYB90-like [Cucumis melo]	[more]
gi\|590641507\|ref\|XP_007030250.1\|	3.0e-54	53.70	Myb domain protein 113, putative [Theobroma cacao]	[more]
gi\|1021506567\|ref\|XP_016196641.1\|	4.4e-53	50.66	PREDICTED: transcription factor MYB113-like isoform X2 [Arachis ipaensis]	[more]
gi\|1012114514\|ref\|XP_015960816.1\|	9.8e-53	50.22	PREDICTED: transcription factor MYB113-like isoform X2 [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.277570.1	Cucsa.277570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 5..50 score: 1.5E-15coord: 56..98 score: 1.5
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 55..103 score: 8.0E-15coord: 2..52 score: 3.1
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 58..105 score: 3.3E-24coord: 5..57 score: 3.7
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 5..97 score: 1.17
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 51..105 score: 23.851coord: 1..50 score: 16
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 190..201 score: 1.0E-80coord: 5..146 score: 1.0
None	No IPR available	PANTHER	PTHR10641:SF526	TRANSCRIPTION FACTOR MYB113-RELATED	coord: 190..201 score: 1.0E-80coord: 5..146 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.277570	ClCG11G010180	Watermelon (Charleston Gray)	cgywcgB480
Cucsa.277570	CSPI02G07780	Wild cucumber (PI 183967)	cgycpiB419
Cucsa.277570	CmaCh05G007790	Cucurbita maxima (Rimu)	cgycmaB0774
Cucsa.277570	CsaV3_2G010190	Cucumber (Chinese Long) v3	cgycucB426
Cucsa.277570	Cla97C11G216460	Watermelon (97103) v2	cgywmbB483
Cucsa.277570	Bhi06G000909	Wax gourd	cgywgoB560

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None