Cucsa.275470 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.275470
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	zinc knuckle (CCHC-type) family protein
Location	scaffold02581 : 399050 .. 409719 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTAGTCTCATATCCACTTCTTCCCATGTAACCCTTCTTCGAGATGTCCTCATCGCTCTGTTTCTCAATTCCGGCATTGACGCCGCACTACTGGCGCCCGAAGAACTTCAGATTTTTCCTTTTACTTCAATCAAACCGATGTATTTGCTTCGCACCTCGCTTCGTTGCTTCCTTGAACAACGACGACTCTGTTGCAATACCCAAACCTGCTCCGGTATTCACTTCCTCATCTTTTGTTTTGGATTTCGACCTTCTACACTCTCTCTTTTTTTTTTTTTACTTCTTCTGGTTTCGCAGCTGGCTTTCGATCCCGCGGAGGAGCTGTACGGACTTGACGTCGATTTAAAACCCAGGTTAGTATATTCGGCTTTAATTCTTGTGATTTGAAGTAGATTCTGTGCTGAATTGGTTGTCGTTGCTGTCTATTTCATCTTGGCACTTCAGTTCTTAGATTTGAATTCAGAGCGTAGAAGTTAATTTTGCATTTCAGGAATTCAGCTTCTAGCGCACCTGAACCCAGGTCCTGGTTTGGCCCAAATGGTCAGTATATTAAAGAATTACCATGTCCAAGTTGCCGAGGTAGGGGTTATGCGCCTTGTACGGAATGTGGAATTGAAAGATCCCGTGCTGACTGTTCTGTGTGTAATGGAAAGGTAATTGCTCTAGCTGACTAATTGACCATGTTAGCTCCTCCATCCTCTATTTTTAATTTCAACTATGTGGTTGATTCTTGGATTTTTGGGGGTCTGTTTGCAATGCATGTAAAAGAAGTCAAAATCATCATGGTTGGGAGTGATTTATACATGTTAAGAAGTCAAAAGCATGTAAAAGACTTGGTGAGGTAGCACTTCACTTGTTAAGTGCTTTAGACCTAGCTGATTGTTAGGGAAGCATTTAAAAACATATTTAAGGATGTAGTTGAACAATACATCCAAATAGTTTGTCACCGGACACTTTAATAATCAGAGTATTTTTGCTAAGATTCACCTTCTCAAAAGCACGCCCAACAAACTATCAATTTAACTAATTCTGCTTTCACCAGGATGTAGTAGAACAATACATCCAAATAATTTGTCATCGGACACTTTAATAATCAGAGTATTTTTGCTAAGATTCACCATCTCAAAAGCACGCCCGACAAACTATCAATTTAACTTGTTCTGCTTTCACCTAGTGTTGGATTTTAATATGTAAATTTTGGGAGCCCAAGGATACAAACCTGTTTAAGAAATAAATTTAGAAAGCCTAGTAATTGACATCTGTGGTAACAAATGACTGCTAGATGATCTATCGGACGTGAGCCTTTTCATCTTGGATAGCACATTCATCTCAATTTGGCAGTAATCATACTGCATGGAAATGCTTGTAGTTGGCCGATTGACTCTACAAAGAAATGGAAGACTTATTTGATTTCAAAGGGCCAACGACATTCAATCTATATTCCATATTTTGGAATGACTCTTATCCAAACAAGATTAAAGTTTTCCTTTGGGAACTTACGCATGGAGGGTTAAAATGGCTAATTGGTTTCAAAGGAGGATGCAAAACTTCCATCTGTCTTCATCCTAGAGTGTCAGGCGTAAAATGCATGCAGAATTGCAGTGCCGTCTTTTTGGTTGCCATCCTGGCAAAACGATATTGGAATTATCTTTTAGAAACATAAGGGTGGAAAGTTCATTCCAGGAAATATTTATGATATTTTGGATTCTATTTTCATGGTACGTTCATTCAAAGGAGACAATAAAACTCTTTGACTTGCTATCATAAAAACTTTCTTCAGGAATCTTTAGTGTGAGAAGAATAGGTGAATCTTCAAGGATAAGCTCTCCACTTCTTTTAGCTTTATGGATTTGGTTACTTTTAGTGCACTTTATTGGTGTCCACGTAAACATGATATTGGTTATAGTATTTTGTCCTGAATTTCCAATCGAAGATCTTTTTTGTAATCCACCATTGGTGGGTGGGAGTGTTTTAACTCCTCATTTCATTTATCAATCAGATTCATTATGTTTTTCTTTCAGAACAAAAGAAAAAATGTTGGCTGTTCCACTCGTTCCTATTTGTTTGTTTACCTTTTATCCCCATGTTGTTAGGGTATAGTGACCTGCCACCAATGTTTGGGGGATCGTGTCATATGGGAAGAGTCCATTGATGAAAGACCATGGGAGAAAGCACGCTCCACGTAACTAACATCCTTCTCTTTCTTTTACTCCTGTTGATTTTTATTTTCATTTTAAATTTCATTGGACTCTAGCTTGTAGGCAGTGAAGGAGTCAAGCTGAGGGAAAATTGATTTATGGCATTATTCTCTATTTATCGGAAGAAATCACATGCCTCGTTACCATTCCAAAATTGGAAGTCTAAAACTGAAAATCATGAGCATCTCTATCCAATGAGGGTGGGGGTTTCTCTGTTACAAAATACAGACCGGATTCTTAGAATAGATCAGAATGTTGTTTGGGTGAACTTAATTGAAAATTTTAGGGAAGAATCTTCTTTCTCAATCAAAGTTTTTGCAATACAAAAAAAAGGTGTGAGGGAGACATTTTAGATTGACAGTCTGCAAAGAATGTTCGCATGGTTGGTCCTGTCTCTGAATTGGTATTCATTTTGCAGATTTTAAAATATTTTTTTTATTAGTCTAGTGATTGGTTCTTACTCTCTCAGTGATAGTTCTTTTATTATTTTCTGCTTTTAGCAATCTTACTGTGGCACAGTTTATTATCCAGACAACTGCAATAGTGAATGTATTACATGTCATGCATCCTCACTTTGTAGTAATAACATATGAGTACCCTATTTCCTAGACCCAGTTCCTATTAATGTTTCTGAAATTGTGTATTCAATAAATTTTTCAATTTTGTGTACTTGCTATGCAGTCTCGATTCTACATGTCTATTCCAGTTAAGTCTTTGTGGTTTTGGGTATCTAAGTGTTTCACGTGTTTTTCATGCCAGTTCTCCTTTAAGAATGAAGGAGGATGATGAAGTCGATAACTTGGAAATAAAGCTGGAAGAAAAGAAGAAATCGAAGCGTGTTTACCAATCACCTCCTCCTGAAGTTGGTTTAAAGATCAGTCGATCATTAAAAGTTTGTTCTCTACCTTCCCTTACTGTGACCTGTTAGCTATGTCATACATTGCTGGATCGATAACCTAAACGATTGTGGATGAAAATATGCACGGACATTATTTATAGTCTAAATAATAGAACAAGAATGTAGTCTCTTGAATCCTATTGATGCCGAGGAATATAGTTATATCTGGCAAACTGATTTTTTAAGGAAACAAGAAACACGACTTTTCATTGATTGATAAAAGATATATAAAGTTTTGGGAAAAAAATTCCAAATGGAAGAGAATAAGAGAAAAAATATGCAAACCCAAGAGGGAGATATCGAAGTATTGCTCTCCAATCATACTTGTTTGCTATTTACCAGTTCATGAATTTAATCTTTGTCGTTTAGTTGAATGATTGCAGATTCTCAATGCCAAAACAGGTATATTTAGTAAGAGAATGAAGATTATCCATCGTGACCCTGCTCTTCATGCTCAGAGAGTGGCTGCAATTAAGGTAATTTTTTGAAATAATTTTTTTTTCCCAGTGCTGTAGTTTTGGATATTGTTAGAATCTCTCTTTTCTTAACCTACTAGTTTGATTTACTTACTAAAAGTAATAAGCTATAGTGTAATAATAGCAATTTTAATAAAACAAATAACCGGGATCTCATGAAACCAAATGATATTTAATTGATATTTAATTGGTGTCCTTTAGTTTTACTATTAAATAAAATCATAGACTTCTGTTTGCTAATAATTGATACGTGTAAGTGTACTGGTCAAATTTTAATTAGAAATGGTTTGAGACTAAGTATTGTCTTCTGGAGATTGGGCTATTAATTTTCTTAGCTATTGTGGATATTTTACCAATTTTATTAAGGGAATTGTAGTCGATGGTGGTTACACTGAAATTACAGCAAGTTAATTTATTTTTTTTAGAAATAACTACTTTCAATGAGAAAATCAAGGGAATTTTAGTCGATGGTGGTTGCACTCAAGTTAAAGCAAGTTAATTTACTTTTTTTTATAGAAATAACTACTTTCACTGAGAAAAAAATGAAAGAAAGCAAGAGCATACAAAAAAAAAAAAAACCAAAGCCCACAAAACCCCTTAGAGAAAACATCTCTAGCCAAGTAAAATATTGCCCGGTGAATAGTTACAAAAAGTTTTCAAAATCAAAACCCAAAGAGAACATTAAATTTTTCCAGGGTCTCTCTCCTCCCCACGAAACACTTTATTGTTTCTATCCCCCCAAAGATTTTACAAACTCGTGCACTCCCTCACAAACCAAAGAAAACAACCTTTCTCTTTGAAAGGCAGATGGAGGAGTAACTCCCTAATCATCAATTGAACATTCCCTTAACGAGCAAGCGTAAAATCAAATTTTTGAAAGAAATCATCTCACATAGATCTGGCAAACTGATACTCCTAGAGAACGTGATCTAGATTTTCATCCGCCTTCCGATAAAAGATACAACACCTAGGGCCCAATAACAAGGCGTCTTTCTCATGAGCCTATTTGACGTGCTCAAACGCCCACGCAGAACTTGCCAAGAGAAGAACTTAACTTTCTTTGGAATCTTTGATCCTCCATAAAACATCAAAGACTAACTCAACAACGGGAGGGGGATCAAGTACTAAAGAATGACTTACACAAGAAGCCCTCCGTAAGGGGGGTTCCACACACGAACATCCTTTCTCCCAATCCTAAAGTCAAAACCCTCAATCTAGGTAGGGGGTGTGAGAACCCAAACCGAACCGAACCGCTTCTGCTTGGTTCAGTTTTATTGTTAAATGAAACCGAACCATGGTTTGGTTTTGCTTTGCCTGAACCAAGGTGGCACCTTTCGTTGTTACGAGCAGAAGATCGTTGAGGTAGGAGGGACCACGAAAGAGTTGCCTATTTGTCGTATATGTGGAAAACACCATTCAAGTTGCTATATGTTCGGTAAAAGAGTTTGCTTCAAATGCAAATAGAGGGGCACTGGGCTGACAAATGCCCTCAAAGACCGTTTGAGGCTATTTCGAAGTAGGATTTATCTTGCAGCAACTAGCAGGGGAAAGTTTTTGCCACTAATCAGCAGAAGACCGAGAAAGCTGATACAGTGGTGGACACTATTTCTAGACACGCATGCTGTACAAAGACTGAAGATATAAAAGAATGCGAAGACCCAAAGTCAAACAGTACTAGTGCATAGTGTCCCAAGATTGGGAGTGTACCTATCACCACCGTGTCAGCTTTCTTGGCCTCCTTCGATTAGTAGCAAAAACTCTCCCCTATTGCGAGGTAGAATCCTGGTCTGAAATAGACTCAAACGATCTTTGAGGGCATATATCAGCTATTGCTCTTCTTATTTGCATTTGAAGCAAACTCTTTTACCGGCCAGATAGCGACTCGAATGGTGTTTTCCACCAATACGACAAATAGGCAACTCTTTTGTGGTCCTTCCCGCCTTAGTGATCTCTTGCTAGTAACGACGAAAAGTGCCACTTGACCTCAGATTCCTCGTGGAACGTTAGTAGGCTGTTGCTCATCCTTTCTCTTCTGTGTTGTGGTTGATCCCTTCCCTGAAGTCGCAGGGCATCATCCTCATGGGCGCTCATATCCACCGCTAGGCGCAGTGCCTCAGCTTGGGTAGTTGGCTTGAAGGCTCGAACAAATCCTTGCAAATCCCTCAACAAGCCTCTAACAAACCTCTTAGCTCATGGCAGCCTCGGTCCCAACTAACTCAGGGGCAAAATGGGACAGCATGTCGTACTTCTGGTCGTACTGCTATACTGTCATCTGGACTTGCTTCAGTTCCAAGAAAAGACGCTTGGCATCCTTAAAGTTGGCGAAGAAAAACTTGGCACAGAAGCTTTCCTTGAACTACTGTCAAGTAATCTGGCTCACATCTCCACCAAGCATTCTCTCTGTAGTCTGTCACCAAATAAGATCTCTCCCTAAGCAGAAACACAACACATTGAACCTTCTGGTTATCAGGACATTTCATGTAACGGAATATGGTTTCCACATACCTTGGTAGGGTCCTCCAAAGATCTATCAAAAGTTTGCGACTCGTACTTCCTGAAATCTCTCAGATGCTTTGCTTAGCTAACAATTGATCCAGCAAGTTCTGAGATACAGCTGGAGCCTGAATAGGGGTTGGCTGAGCTGGCTGGAACTGTGCCAACACCTCTGATACAATATCTCTGAATCTCTGCCTCAACTAGGTTGACATAGTGGCCAAGTCCGCATGGTGTAGCGTGGTTGGCAGTTTGTACAACAGGCTGACCTTCTAGCTGATTACGCCTACTCCTCTGCCTCCCTGACCACCCCTTCGTGCCCTCTACGTGGCAACATTTTTCCTAAATTCCACCACAGAAAATCCTTCACAGATAAGTCTTAACATTCATGTAATTCTAGTTTAATACATGCAAAGTCACGTGCATAATCATAATCATAAACATACTTGGCGAGTGACGAAGGACCATATAGCCGTACGGACAAAAACTGAAGACTCACATCGTAAGTCAGTTTATAGAATGTAAAAACTTAGGCTCTTGTACCAATTGAAACGACTTAGGCTCAGAAGTCAAAAGTCGAATCCCCAACATTCCCTTGCATTCCTTGCGACCTGTCAACATCATCTTTACTTGTTTTAAAGGCTTATTAGAGTGTAAGTTGTCCTTACAAACCAACACGAGTCCTTTCAGCCTGCGTTGTCCTCGCTCACATGCATCCTAGGAAAATTCCCAAAAGGTCACCAAATAAATGAATGTTTCAAACTAAGCACGCTTAAGTCTAGAGTTCTTATAATTGAGCCATTGGAAATGAAGGTGCACCTTATTAGTATAAGTAGTAACTTTTAATTTTTAAAACTTTTTCATAACTGTATTTTCATGTCCTCAGAATCCCTCTCATTCAGATGTGATATAGGGTCATTCATGTCCCCCTCCTAAACTCAGGCGTTACATGGACCACAATTAACGTTGAATGTCAGAGGGTGAGAGGTCAACTGGGAATATGGCACTCAGAACAAAAGTAGGAAATTCTTAAATAGAATTTTCTCAACAATTATTGAAAGACTCGTTTGATAGCTATGTACAAAATATAGCCATACTCGGTACAAATTAGATTTTGTATTTAGTTTGGTGTATTTTAAATATATTGCTTTGATTGTTACTCCTAGTATTCGAAAAAAAAAACCATTTTATTAGATATTTATTATGGAGGTTTACTGCAAACACAATTCAAATGAAATTCGATGCAGTTCTGGTTGCACTAGATGGTTTGCTGATAGCATGTGATATTTATGTGGATTACAAATTTTCTTTTCCCTTTTATTTTTAAATGGGAATTATGCCTGAATAGTGAATACCACTTATGAGTCGCAGCCAAAACGGACTTAAATTTCATTTTACAATGTTTTCAAATGCATGTAGTTGTCAATTTGTACCTCCAACCTATGAGCTCTTACAAATATTTGATGTTTTCTTTGTTACACAGAAAGCCAAAGGAAGTGCTGAAGCAAGAAAACGTACTTCTGAGGCTTTGAAAGCATTCTTTAGTGACCCAGAAAACCGTAGAAAGCGGAGCAGTGCAATGAAAGGTAAACTTTTGTACTAAAATTTCAACACCTAGTTCAGCTTTATTATAATAAGAAAGCTATAGTGTTTCTATTATTAGATTCTATGGGGTTAGATACCTATAGAATGTTAAACATTTCATTGTCAACCCAATTATTGTTCAACTGGTTCAATGATCAAAATTTTGGCCAAAAAGTCAGAAGTTCAAATTCATAGAAAATAAATATTTCAATATAATTTTGGTATCACAATTTTCTACGTTGATACCAAATTTTGACCAAGGAAAAACACACGACTTTCATGTGACAATAGCGATACATTTGTAATTTAGAGACTGTAGAAAGGACTTACAAAACAAAGATAAAGAGTGCCGATGCCTAAGTTAGTAAGAAAACTAAATAATAGAAAAGAAGTCTGAAGTTCTTAGATGCCTCACATGTGTAATGATGTGTTTACAGGGGATTTAATCTAGGATTTATAGCCTCATAGGATTAAGATATTAGTTTTTTCTAATCCCAATCAAGAATAGATTAATTCTTACCTTATTTTGTTCTATCCTATCTTACTTTATTCTATCATTCCAAACTTCACCCATAACATTCTAGGCACACTATTTACTTTGACCTTAAAAACGATTAACAAAGAATTTACTTATACCCTAAATGATTGGCAATAAATATGATTTCACCTTAACGTTTTGCTTTGGCAAACATTTAACTAAAAGTTAGAAACTATCGTCATTTTCAAAAGTTGGAGAGAGTTTTCCACATCTTTTTCTGTTGGGAGAGAAGTTTGCATGAACTGTTAAAAACCCCCATTTCTCGAGAATCTTGACAACGTTTTTAGGTCTTTGAGATACAGATGGAAAGTAGACAGGAAACTTTAAAAACACCATCAGGAATTAGTAGGTCTCTTCTCCTTTGTGTAAAAACGTCTTTTTTCTTTTCTGCATGTTGAATCTTTAGGCCTTTTGAATAGATTTGACAAAACTTAATGTGATATAACGTTAAATTTGTCTTCACCCATTAGATTAAGCTTTTGGGTTAAGTATAACAATTGTGGTAGGAGGATTCAAACCACAGATCTTGTGGTTACTTGTATACTTAGATGTCAATTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCTTGTTGGCAACTTAAGCTTTTTGATTAATTGGTGATTTAAGATGGTATCAGAGCAAGTGGTTCTGAAAGTCCTGTGTTCACCCATGGAGTGTTATTTCCTCCCTAATTAAAATTGATTTCCTCTTTGTTGGATCTTTTACATGTTTCAAACCTACGAGTGAAATGGAGTGTTAGATTATATAACATCATATTTGTTTTGAAGTTTTTGTGTCAATTGGTGATTTAAGACTTAGGAACAAGAATTCTCACCTTGTGATATATCAAAGTACTTGAGCCGTTCTCTCGTAGTGCATCAAATATTAGAAGCTTAGATAAAAAATCACACTGGACTAGTTTTGGTAAAGCTGATTTTCATTCCAGCAATCCTTCCAAAAACTGAGAATACTGAAAATTTATGAAACTCTCAATTGTCGCTCCAAAAATAAGTCTATCGTTGGCAAAATGAAAACTACAGATGTTATAAAAGTTTTCTTTCTAACTGAATGGGGTTGAATTGATGACCTTTCTTGAATAAAATCTGTTCTATAGGTTGTGTTCTTTAGAATGTGGTTGAATTGATAGACAACTTCCAACCTACAAGTCTTAGTTGTTAAGGTGATAGTTCCAGGTTCACCTGCACAAGTACGTGCAGGTTGTACCATGACTCGTGGAAATTTCTGAAGTTATTAGCACATTACTGAAAACTATTGTCTTTTATCGTATTATACTGAAGCTGACATCTTTGTCAAATGCAGGAGTGAAATTTTACTGTAAAAACTGTGGCCGTGAAGGGCATCGAAGACACTATTGCCCCGAACTTAAGGAAGATTCCATCGATAGGCGATTCAGATGTCGAGTATGTGGAGAGAAGGGCCATAACAGGAAGACTTGTGAGAAGTCTGGGTTGAATGTTACACCAATAACCGCAACAATTCAGCGTCACTGTGGGATATGTGGTTTGAAGGGCCACAACAAGAGGAACTGTCAGAAGTCCGATGCACATCGTCAGAGCCATCAAAACGTGTTGAGGCCGAACTTGATAAGTGAATACAGGGCGAGCAATGAAAATAGGAGAGTGAGGCAGTATCATTGTAGGATTTGCAAGGAAAGCGGGCACAGTCAACGGAATTGTCCCAGTACTGATCGGGAAGGCAATGGTCTGAGTACTAGAAGATCATACAGTTGCAAACTTTGTCATGAAAAAGGGCACAATATTAGGACATGCCCAAATAGAAGTACGAACAATCTACAGAAAAATCCTCCTGTTGCTTTAAACCAATAATTTTTATTGTAGTATTCATTGAAATTCAACTACATTTATGACATGAAGCAACGCTCAGGAAAGATTCATGACATGAAATTCAACTACATTTATGACATGAAGTAACAAATTTATTTTATTTATTACTTTTCCTTTTT

mRNA sequence

TGGTAGTCTCATATCCACTTCTTCCCATGTAACCCTTCTTCGAGATGTCCTCATCGCTCTGTTTCTCAATTCCGGCATTGACGCCGCACTACTGGCGCCCGAAGAACTTCAGATTTTTCCTTTTACTTCAATCAAACCGATGTATTTGCTTCGCACCTCGCTTCGTTGCTTCCTTGAACAACGACGACTCTGTTGCAATACCCAAACCTGCTCCGCTGGCTTTCGATCCCGCGGAGGAGCTGTACGGACTTGACGTCGATTTAAAACCCAGGAATTCAGCTTCTAGCGCACCTGAACCCAGGTCCTGGTTTGGCCCAAATGGTCAGTATATTAAAGAATTACCATGTCCAAGTTGCCGAGGTAGGGGTTATGCGCCTTGTACGGAATGTGGAATTGAAAGATCCCGTGCTGACTGTTCTGTGTGTAATGGAAAGGGTATAGTGACCTGCCACCAATGTTTGGGGGATCGTGTCATATGGGAAGAGTCCATTGATGAAAGACCATGGGAGAAAGCACGCTCCACTTCTCCTTTAAGAATGAAGGAGGATGATGAAGTCGATAACTTGGAAATAAAGCTGGAAGAAAAGAAGAAATCGAAGCGTGTTTACCAATCACCTCCTCCTGAAGTTGGTTTAAAGATCAGTCGATCATTAAAAATTCTCAATGCCAAAACAGGTATATTTAGTAAGAGAATGAAGATTATCCATCGTGACCCTGCTCTTCATGCTCAGAGAGTGGCTGCAATTAAGAAAGCCAAAGGAAGTGCTGAAGCAAGAAAACGTACTTCTGAGGCTTTGAAAGCATTCTTTAGTGACCCAGAAAACCGTAGAAAGCGGAGCAGTGCAATGAAAGGAGTGAAATTTTACTGTAAAAACTGTGGCCGTGAAGGGCATCGAAGACACTATTGCCCCGAACTTAAGGAAGATTCCATCGATAGGCGATTCAGATGTCGAGTATGTGGAGAGAAGGGCCATAACAGGAAGACTTGTGAGAAGTCTGGGTTGAATGTTACACCAATAACCGCAACAATTCAGCGTCACTGTGGGATATGTGGTTTGAAGGGCCACAACAAGAGGAACTGTCAGAAGTCCGATGCACATCGTCAGAGCCATCAAAACGTGTTGAGGCCGAACTTGATAAGTGAATACAGGGCGAGCAATGAAAATAGGAGAGTGAGGCAGTATCATTGTAGGATTTGCAAGGAAAGCGGGCACAGTCAACGGAATTGTCCCAGTACTGATCGGGAAGGCAATGGTCTGAGTACTAGAAGATCATACAGTTGCAAACTTTGTCATGAAAAAGGGCACAATATTAGGACATGCCCAAATAGAAGTACGAACAATCTACAGAAAAATCCTCCTGTTGCTTTAAACCAATAATTTTTATTGTAGTATTCATTGAAATTCAACTACATTTATGACATGAAGCAACGCTCAGGAAAGATTCATGACATGAAATTCAACTACATTTATGACATGAAGTAACAAATTTATTTTATTTATTACTTTTCCTTTTT

Coding sequence (CDS)

ATGTCCTCATCGCTCTGTTTCTCAATTCCGGCATTGACGCCGCACTACTGGCGCCCGAAGAACTTCAGATTTTTCCTTTTACTTCAATCAAACCGATGTATTTGCTTCGCACCTCGCTTCGTTGCTTCCTTGAACAACGACGACTCTGTTGCAATACCCAAACCTGCTCCGCTGGCTTTCGATCCCGCGGAGGAGCTGTACGGACTTGACGTCGATTTAAAACCCAGGAATTCAGCTTCTAGCGCACCTGAACCCAGGTCCTGGTTTGGCCCAAATGGTCAGTATATTAAAGAATTACCATGTCCAAGTTGCCGAGGTAGGGGTTATGCGCCTTGTACGGAATGTGGAATTGAAAGATCCCGTGCTGACTGTTCTGTGTGTAATGGAAAGGGTATAGTGACCTGCCACCAATGTTTGGGGGATCGTGTCATATGGGAAGAGTCCATTGATGAAAGACCATGGGAGAAAGCACGCTCCACTTCTCCTTTAAGAATGAAGGAGGATGATGAAGTCGATAACTTGGAAATAAAGCTGGAAGAAAAGAAGAAATCGAAGCGTGTTTACCAATCACCTCCTCCTGAAGTTGGTTTAAAGATCAGTCGATCATTAAAAATTCTCAATGCCAAAACAGGTATATTTAGTAAGAGAATGAAGATTATCCATCGTGACCCTGCTCTTCATGCTCAGAGAGTGGCTGCAATTAAGAAAGCCAAAGGAAGTGCTGAAGCAAGAAAACGTACTTCTGAGGCTTTGAAAGCATTCTTTAGTGACCCAGAAAACCGTAGAAAGCGGAGCAGTGCAATGAAAGGAGTGAAATTTTACTGTAAAAACTGTGGCCGTGAAGGGCATCGAAGACACTATTGCCCCGAACTTAAGGAAGATTCCATCGATAGGCGATTCAGATGTCGAGTATGTGGAGAGAAGGGCCATAACAGGAAGACTTGTGAGAAGTCTGGGTTGAATGTTACACCAATAACCGCAACAATTCAGCGTCACTGTGGGATATGTGGTTTGAAGGGCCACAACAAGAGGAACTGTCAGAAGTCCGATGCACATCGTCAGAGCCATCAAAACGTGTTGAGGCCGAACTTGATAAGTGAATACAGGGCGAGCAATGAAAATAGGAGAGTGAGGCAGTATCATTGTAGGATTTGCAAGGAAAGCGGGCACAGTCAACGGAATTGTCCCAGTACTGATCGGGAAGGCAATGGTCTGAGTACTAGAAGATCATACAGTTGCAAACTTTGTCATGAAAAAGGGCACAATATTAGGACATGCCCAAATAGAAGTACGAACAATCTACAGAAAAATCCTCCTGTTGCTTTAAACCAATAA

Protein sequence

MSSSLCFSIPALTPHYWRPKNFRFFLLLQSNRCICFAPRFVASLNNDDSVAIPKPAPLAFDPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKILNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYCKNCGREGHRRHYCPELKEDSIDRRFRCRVCGEKGHNRKTCEKSGLNVTPITATIQRHCGICGLKGHNKRNCQKSDAHRQSHQNVLRPNLISEYRASNENRRVRQYHCRICKESGHSQRNCPSTDREGNGLSTRRSYSCKLCHEKGHNIRTCPNRSTNNLQKNPPVALNQ*

Homology

[Close]

BLAST of Cucsa.275470 vs. TrEMBL
Match: A0A0A0KS13_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G489320 PE=4 SV=1)

HSP 1 Score: 936.4 bits (2419), Expect = 1.3e-269
Identity = 444/444 (100.00%), Postives = 444/444 (100.00%), Query Frame = 1


Query: 1   MSSSLCFSIPALTPHYWRPKNFRFFLLLQSNRCICFAPRFVASLNNDDSVAIPKPAPLAF 60
           MSSSLCFSIPALTPHYWRPKNFRFFLLLQSNRCICFAPRFVASLNNDDSVAIPKPAPLAF
Sbjct: 1   MSSSLCFSIPALTPHYWRPKNFRFFLLLQSNRCICFAPRFVASLNNDDSVAIPKPAPLAF 60

Query: 61  DPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERS 120
           DPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERS
Sbjct: 61  DPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERS 120

Query: 121 RADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEE 180
           RADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEE
Sbjct: 121 RADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEE 180

Query: 181 KKKSKRVYQSPPPEVGLKISRSLKILNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGS 240
           KKKSKRVYQSPPPEVGLKISRSLKILNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGS
Sbjct: 181 KKKSKRVYQSPPPEVGLKISRSLKILNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGS 240

Query: 241 AEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYCKNCGREGHRRHYCPELKEDSIDRRF 300
           AEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYCKNCGREGHRRHYCPELKEDSIDRRF
Sbjct: 241 AEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYCKNCGREGHRRHYCPELKEDSIDRRF 300

Query: 301 RCRVCGEKGHNRKTCEKSGLNVTPITATIQRHCGICGLKGHNKRNCQKSDAHRQSHQNVL 360
           RCRVCGEKGHNRKTCEKSGLNVTPITATIQRHCGICGLKGHNKRNCQKSDAHRQSHQNVL
Sbjct: 301 RCRVCGEKGHNRKTCEKSGLNVTPITATIQRHCGICGLKGHNKRNCQKSDAHRQSHQNVL 360

Query: 361 RPNLISEYRASNENRRVRQYHCRICKESGHSQRNCPSTDREGNGLSTRRSYSCKLCHEKG 420
           RPNLISEYRASNENRRVRQYHCRICKESGHSQRNCPSTDREGNGLSTRRSYSCKLCHEKG
Sbjct: 361 RPNLISEYRASNENRRVRQYHCRICKESGHSQRNCPSTDREGNGLSTRRSYSCKLCHEKG 420

Query: 421 HNIRTCPNRSTNNLQKNPPVALNQ 445
           HNIRTCPNRSTNNLQKNPPVALNQ
Sbjct: 421 HNIRTCPNRSTNNLQKNPPVALNQ 444

[Close]

BLAST of Cucsa.275470 vs. TrEMBL
Match: D7TND8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01710 PE=4 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 1.2e-150
Identity = 261/384 (67.97%), Postives = 295/384 (76.82%), Query Frame = 1


Query: 17  WRPKNFRFFLLLQSNRCICFAPRFVASLNNDDSVAIPKPAPLAFDPAEELYGLDVDLKPR 76
           W  KN RF + L S R I F PR ++S  NDDSV  PK   L +DP+ EL+GL+VDL+PR
Sbjct: 5   WSHKNVRFLIFLHSKRKIDFTPRIISSSINDDSV--PKQPQLGYDPSVELFGLEVDLQPR 64

Query: 77  NSASSAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCH 136
           N  S AP+ RSWFGPNGQYI+ELPCPSCRGRGY PCTECGIERSR DCS CNGKG+ TC 
Sbjct: 65  NVTSDAPKIRSWFGPNGQYIRELPCPSCRGRGYTPCTECGIERSRLDCSQCNGKGMQTCR 124

Query: 137 QCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVG 196
           +C GD VIWEESIDERPWEKARS SPL++KEDDEVDNL+IKL+ ++KSKRVYQSP PEVG
Sbjct: 125 KCFGDCVIWEESIDERPWEKARSVSPLKVKEDDEVDNLDIKLDVRRKSKRVYQSPSPEVG 184

Query: 197 LKISRSLKILNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFS 256
           LKISRSLK LNAKTG+FSKRMKIIHRDP LHAQRVAAIKKAKG+A ARKR SEALKAFF 
Sbjct: 185 LKISRSLKSLNAKTGLFSKRMKIIHRDPKLHAQRVAAIKKAKGTAAARKRASEALKAFFR 244

Query: 257 DPENRRKRSSAMKGVKFYCKNCGREGHRRHYCPELKEDSIDRRFRCRVCGEKGHNRKTCE 316
           DPENRRKRS AMKG KFYCKNCGREGHRRHYCPEL   S+DRRFRCR+CGEKGHNR+TC 
Sbjct: 245 DPENRRKRSIAMKGAKFYCKNCGREGHRRHYCPELANSSVDRRFRCRLCGEKGHNRRTCR 304

Query: 317 KSGLNVTPITATIQRHCGICGLKGHNKRNCQKSDAHRQSHQNVLRPNLISEYRASNENRR 376
           +S  + T  T +   HC ICG  GHN+R C +    +       R +LIS  R       
Sbjct: 305 RSRESGTRSTVSRHHHCRICGHSGHNRRTCPQGTGLKLDAGGTNRGSLISGSRI------ 364

Query: 377 VRQYHCRICKESGHSQRNCPSTDR 401
              Y CR+C E GH+ R CPS ++
Sbjct: 365 ---YACRLCLEKGHNIRTCPSKNK 377

[Close]

BLAST of Cucsa.275470 vs. TrEMBL
Match: D7TND8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01710 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 3.2e-02
Identity = 24/61 (39.34%), Postives = 31/61 (50.82%), Query Frame = 1


Query: 373 ENRRVR-------QYHCRICKESGHSQRNCPSTDREGNGLSTRRSYSCKLCHEKGHNIRT 427
           ENRR R       +++C+ C   GH +  CP         S  R + C+LC EKGHN RT
Sbjct: 245 ENRRKRSIAMKGAKFYCKNCGREGHRRHYCPELANS----SVDRRFRCRLCGEKGHNRRT 301

HSP 2 Score: 523.9 bits (1348), Expect = 2.0e-145
Identity = 258/412 (62.62%), Postives = 300/412 (72.82%), Query Frame = 1


Query: 3   SSLCFSIPALTPHYWRPKNFRFFLLLQSNRCICFAPRFVASLNNDDSVAIPKPAPLAFDP 62
           SSLC     L P  WR K+ RF ++L S   +CF P   +S +NDDS ++P+ + L +DP
Sbjct: 2   SSLCPCFRPLLPQ-WRYKSARFLVILHSKTKVCFKPWVFSSSSNDDSASLPRQSQLGYDP 61

Query: 63  AEELYGLDVDLKP-----------------RNSASSAPEPRSWFGPNGQYIKELPCPSCR 122
           +EEL+GL VD KP                  N+    P+PRSWFGPNGQYI+ELPCPSCR
Sbjct: 62  SEELFGLSVDPKPSPILTSLFVSEREYLSINNALPGTPKPRSWFGPNGQYIRELPCPSCR 121

Query: 123 GRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRM 182
           GRGY PCTECGIERSR DCS C+GKGI+TC QC GDRVIWEESIDE+PWEKARS SPLR+
Sbjct: 122 GRGYTPCTECGIERSRLDCSQCSGKGIMTCRQCSGDRVIWEESIDEKPWEKARSISPLRV 181

Query: 183 KEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKILNAKTGIFSKRMKIIHRDPA 242
           KEDDEVDNL++ L+ KKKSKRVYQSP PEVGLKISRSLK LNAKTG+FSKRMKIIHRDP 
Sbjct: 182 KEDDEVDNLDLNLDVKKKSKRVYQSPSPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPM 241

Query: 243 LHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYCKNCGREGHRR 302
           L AQRVAAIKKAKG+A ARKR SEALKAFFSDPENRRKRS +MKGVKFYC NCGREGHRR
Sbjct: 242 LQAQRVAAIKKAKGTAAARKRVSEALKAFFSDPENRRKRSISMKGVKFYCGNCGREGHRR 301

Query: 303 HYCPELKEDSIDRRFRCRVCGEKGHNRKTCEKSGLNVTPITATIQRHCGICGLKGHNKRN 362
           HYCPE+++ SID+RF+CR+CGEKGHNR+TC  S L+    +   +  C IC   GHN+R 
Sbjct: 302 HYCPEIRDSSIDKRFKCRLCGEKGHNRRTCPMSRLSNHKSSGRRRHRCKICCKSGHNRRT 361

Query: 363 CQKSDAHRQSHQNVLRPNLISEYRASNENRRVRQYHCRICKESGHSQRNCPS 398
           C +           +R NL S  R          Y CR+C+E GH+ R CPS
Sbjct: 362 CPRVIG--------VRDNLTSGSRI---------YTCRLCREKGHNIRTCPS 395

[Close]

BLAST of Cucsa.275470 vs. TrEMBL
Match: A0A061EBM7_THECC (Zinc knuckle family protein OS=Theobroma cacao GN=TCM_011796 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.4e-02
Identity = 26/68 (38.24%), Postives = 34/68 (50.00%), Query Frame = 1


Query: 373 ENRRVR-------QYHCRICKESGHSQRNCPSTDREGNGLSTRRSYSCKLCHEKGHNIRT 432
           ENRR R       +++C  C   GH +  CP    E    S  + + C+LC EKGHN RT
Sbjct: 274 ENRRKRSISMKGVKFYCGNCGREGHRRHYCP----EIRDSSIDKRFKCRLCGEKGHNRRT 333

Query: 433 CPNRSTNN 434
           CP    +N
Sbjct: 334 CPMSRLSN 337

HSP 2 Score: 520.8 bits (1340), Expect = 1.7e-144
Identity = 252/410 (61.46%), Postives = 300/410 (73.17%), Query Frame = 1


Query: 21  NFRFFLLLQSNRCICFAPRFVASLNNDDSVAIPKPAPLAFDPAEELYGLDVDLKPRNSAS 80
           N R  LLL  N      P  + S   DDS + PKP  L ++P EEL+ L+V+LKP    S
Sbjct: 25  NARPLLLLHPN-----TPTTLCSSLTDDSFSTPKPNQLGYNPPEELFELEVELKPSKGKS 84

Query: 81  SAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLG 140
            APEPRSWFGPNGQYI+ELPCPSCR RGY PCTECGIERSR DC  C GKGI+TCHQC G
Sbjct: 85  HAPEPRSWFGPNGQYIRELPCPSCRARGYTPCTECGIERSRPDCPKCYGKGILTCHQCSG 144

Query: 141 DRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKIS 200
           DRVIWEESIDE+PWE+A S SPL++KEDDEVD L+IKL+ KKKSKRVYQSPPPEVGLKIS
Sbjct: 145 DRVIWEESIDEKPWERAHSISPLKVKEDDEVDRLDIKLDVKKKSKRVYQSPPPEVGLKIS 204

Query: 201 RSLKILNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPEN 260
           RSLK LNAKTG+FS RMKIIH+DP L AQRVAAIKKAKG+  AR+ TS+ +KAFFSDP N
Sbjct: 205 RSLKSLNAKTGLFSNRMKIIHQDPKLQAQRVAAIKKAKGTVAARRHTSKTMKAFFSDPIN 264

Query: 261 RRKRSSAMKGVKFYCKNCGREGHRRHYCPELKEDSIDRRFRCRVCGEKGHNRKTCEKSGL 320
           R+KRS AMKGVKFYC+NCGREGHRR+YCPELK+ SIDRRF CRVCGEKGHNR+TC +  +
Sbjct: 265 RQKRSMAMKGVKFYCQNCGREGHRRYYCPELKDTSIDRRFTCRVCGEKGHNRRTC-RMMV 324

Query: 321 NVTPITATIQRHCGICGLKGHNKRNCQKSDAHRQSHQNVLRPNLISEYRASNENRRVRQY 380
           + +      Q  C +CG KGHN+R C+            LR +L        + R ++  
Sbjct: 325 SHSNERLIKQHQCRVCGEKGHNRRTCR-----------TLRISL-------RKGRVIKHR 384

Query: 381 HCRICKESGHSQRNCPSTDREGNGLSTRRSYSCKLCHEKGHNIRTCPNRS 431
            C++C + GH++R CP          +RR Y C+LC +KGHN RTCP+++
Sbjct: 385 KCKVCHQFGHNRRTCPEVVPSKRNTVSRRQYKCRLCKKKGHNSRTCPSKT 410

[Close]

BLAST of Cucsa.275470 vs. TrEMBL
Match: V4TJR8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031710mg PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 1.8e-143
Identity = 254/400 (63.50%), Postives = 299/400 (74.75%), Query Frame = 1


Query: 3   SSLCFSIPAL-TPHYWRPKNFRFFLLLQSNRCICFAPRFVASLNNDDSVAIPKPAPLAFD 62
           SS+C S   + TP   R K+ RF +L  S R + F+P  ++S  NDDSVA+PK   L +D
Sbjct: 2   SSICCSFGVIVTP--LRHKDKRFLVLYHSKRRVSFSPCSMSS-TNDDSVAVPKQNQLGYD 61

Query: 63  PAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSR 122
           P+EEL GL VDLKPRN+A S P+PRSWFGPNGQYI+ELPCPSCRGRGY PC ECGIER+R
Sbjct: 62  PSEELLGLGVDLKPRNAAPSTPKPRSWFGPNGQYIRELPCPSCRGRGYTPCVECGIERTR 121

Query: 123 ADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEK 182
           +DCS+CNGKGI+TCHQC GD VIWEESIDE+PWE A S SPL++KEDDEVDNLEIK+  K
Sbjct: 122 SDCSLCNGKGIMTCHQCSGDCVIWEESIDEQPWENAHSVSPLKVKEDDEVDNLEIKVGVK 181

Query: 183 KKSKRVYQSPPPEVGLKISRSLKILNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSA 242
           KKSKRVY SPPPEVGLKISRSLK LNAKTG+F+KRMKIIHRDP LHAQRVAAIKKAKG+A
Sbjct: 182 KKSKRVYHSPPPEVGLKISRSLKSLNAKTGLFTKRMKIIHRDPKLHAQRVAAIKKAKGTA 241

Query: 243 EARKRTSEALKAFFSDPENRRKRSSAMKGVKFYCKNCGREGHRRHYCPELKEDSIDRRFR 302
            ARK  SE LKAFFSDPENR+KRS AMKGV+FYCK+CGREGHR+ YCPELK+   DR F+
Sbjct: 242 AARKHASETLKAFFSDPENRQKRSIAMKGVRFYCKHCGREGHRKFYCPELKDGLTDRGFK 301

Query: 303 CRVCGEKGHNRKTCEKSGLNVTPITATIQRHCGICGLKGHNKRNCQKSDAHRQSHQNVLR 362
           CR+CGE+GHNR+TC KS L+    T +    C IC  +GHN+R C +    ++   N  +
Sbjct: 302 CRLCGERGHNRRTCPKSRLSYHNGTVSKHHRCQICRQRGHNRRTCPQVTGEKRHDSNGQK 361

Query: 363 PNLISEYRASNENRRVRQYHCRICKESGHSQRNCPSTDRE 402
               S  +            CR C E GH+ R CP  + E
Sbjct: 362 HIPTSASKTCT---------CRFCGEKGHNIRTCPRRNLE 389

[Close]

BLAST of Cucsa.275470 vs. TAIR10
Match: AT5G20220.1 (AT5G20220.1 zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 468.8 bits (1205), Expect = 3.8e-132
Identity = 235/389 (60.41%), Postives = 278/389 (71.47%), Query Frame = 1


Query: 18  RPKNFRFFLLLQSNRCICFAPRFVASL-------NNDDSVAIPKP--APLAFDPAEELYG 77
           R K  RF  LL  N    F PR ++S        NND SV+  +     + +DP+EEL+G
Sbjct: 2   RKKKTRFQFLLNPNSKFVFFPRAISSSSSSSSDNNNDGSVSSSRQNNRQMGYDPSEELFG 61

Query: 78  LDVDLKPRNSASSAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERSRADCSVCN 137
             VD KPR  +  + EPRSWFGPNGQYI+ELPCP+CRGRGY  C+ CGIERSR DC  C 
Sbjct: 62  --VDFKPRFISGDSREPRSWFGPNGQYIRELPCPTCRGRGYTSCSNCGIERSRLDCPQCK 121

Query: 138 GKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVY 197
           GKGI+TC +CLGD VIWEESIDERPWEKARS+SP R+KEDDEVDNLEIK  +++KSKR+Y
Sbjct: 122 GKGIMTCLRCLGDCVIWEESIDERPWEKARSSSPFRVKEDDEVDNLEIKFSKRRKSKRIY 181

Query: 198 QSPPPEVGLKISRSLKILNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGSAEARKRTS 257
           QSP PEVG KISRSLK LNAKTG+FSKRMKIIHRDP LHAQRVAAIKKAKG+  ARK  S
Sbjct: 182 QSPTPEVGQKISRSLKSLNAKTGLFSKRMKIIHRDPVLHAQRVAAIKKAKGTPAARKHAS 241

Query: 258 EALKAFFSDPENRRKRSSAMKGVKFYCKNCGREGHRRHYCPELKEDSIDRRFRCRVCGEK 317
           E++KAFFS+P NR +RS +MKG KFYCKNCG+EGHRRHYCPEL  ++ DR+FRCR CG K
Sbjct: 242 ESMKAFFSNPVNREQRSLSMKGTKFYCKNCGQEGHRRHYCPELGTNA-DRKFRCRGCGGK 301

Query: 318 GHNRKTCEKSGLNVTPITATIQRHCGICGLKGHNKRNCQKSDAHRQSHQNVLRPNLISEY 377
           GHNR+TC KS   VT   +T    CGICG +GHN R C+K           + P+   E 
Sbjct: 302 GHNRRTCPKSKSIVTKGISTRYHKCGICGERGHNSRTCRKPTG--------VNPSCSGEN 361

Query: 378 RASNENRRVRQYHCRICKESGHSQRNCPS 398
              +   ++  Y C  CK+ GH+ R CPS
Sbjct: 362 SGEDGVGKI-TYACGFCKKMGHNVRTCPS 378

HSP 2 Score: 45.1 bits (105), Expect = 1.4e-04
Identity = 18/49 (36.73%), Postives = 27/49 (55.10%), Query Frame = 1


Query: 379 QYHCRICKESGHSQRNCPSTDREGNGLSTRRSYSCKLCHEKGHNIRTCP 428
           +++C+ C + GH +  CP       G +  R + C+ C  KGHN RTCP
Sbjct: 263 KFYCKNCGQEGHRRHYCPEL-----GTNADRKFRCRGCGGKGHNRRTCP 306

[Close]

BLAST of Cucsa.275470 vs. NCBI nr
Match: gi|449452102|ref|XP_004143799.1| (PREDICTED: uncharacterized protein LOC101211176 [Cucumis sativus])

HSP 1 Score: 936.4 bits (2419), Expect = 1.8e-269
Identity = 444/444 (100.00%), Postives = 444/444 (100.00%), Query Frame = 1


Query: 1   MSSSLCFSIPALTPHYWRPKNFRFFLLLQSNRCICFAPRFVASLNNDDSVAIPKPAPLAF 60
           MSSSLCFSIPALTPHYWRPKNFRFFLLLQSNRCICFAPRFVASLNNDDSVAIPKPAPLAF
Sbjct: 1   MSSSLCFSIPALTPHYWRPKNFRFFLLLQSNRCICFAPRFVASLNNDDSVAIPKPAPLAF 60

Query: 61  DPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERS 120
           DPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERS
Sbjct: 61  DPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERS 120

Query: 121 RADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEE 180
           RADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEE
Sbjct: 121 RADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEE 180

Query: 181 KKKSKRVYQSPPPEVGLKISRSLKILNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGS 240
           KKKSKRVYQSPPPEVGLKISRSLKILNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGS
Sbjct: 181 KKKSKRVYQSPPPEVGLKISRSLKILNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGS 240

Query: 241 AEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYCKNCGREGHRRHYCPELKEDSIDRRF 300
           AEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYCKNCGREGHRRHYCPELKEDSIDRRF
Sbjct: 241 AEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYCKNCGREGHRRHYCPELKEDSIDRRF 300

Query: 301 RCRVCGEKGHNRKTCEKSGLNVTPITATIQRHCGICGLKGHNKRNCQKSDAHRQSHQNVL 360
           RCRVCGEKGHNRKTCEKSGLNVTPITATIQRHCGICGLKGHNKRNCQKSDAHRQSHQNVL
Sbjct: 301 RCRVCGEKGHNRKTCEKSGLNVTPITATIQRHCGICGLKGHNKRNCQKSDAHRQSHQNVL 360

Query: 361 RPNLISEYRASNENRRVRQYHCRICKESGHSQRNCPSTDREGNGLSTRRSYSCKLCHEKG 420
           RPNLISEYRASNENRRVRQYHCRICKESGHSQRNCPSTDREGNGLSTRRSYSCKLCHEKG
Sbjct: 361 RPNLISEYRASNENRRVRQYHCRICKESGHSQRNCPSTDREGNGLSTRRSYSCKLCHEKG 420

Query: 421 HNIRTCPNRSTNNLQKNPPVALNQ 445
           HNIRTCPNRSTNNLQKNPPVALNQ
Sbjct: 421 HNIRTCPNRSTNNLQKNPPVALNQ 444

[Close]

BLAST of Cucsa.275470 vs. NCBI nr
Match: gi|659131425|ref|XP_008465679.1| (PREDICTED: uncharacterized protein LOC103503314 isoform X2 [Cucumis melo])

HSP 1 Score: 876.7 bits (2264), Expect = 1.7e-251
Identity = 416/444 (93.69%), Postives = 425/444 (95.72%), Query Frame = 1


Query: 1   MSSSLCFSIPALTPHYWRPKNFRFFLLLQSNRCICFAPRFVASLNNDDSVAIPKPAPLAF 60
           MSSSLCFSIPALTPHYWR KNF FFLLLQSNRCICFAPRFVA L NDDSVAIPKPAPLAF
Sbjct: 1   MSSSLCFSIPALTPHYWRSKNFGFFLLLQSNRCICFAPRFVACLKNDDSVAIPKPAPLAF 60

Query: 61  DPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERS 120
           DPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERS
Sbjct: 61  DPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQYIKELPCPSCRGRGYAPCTECGIERS 120

Query: 121 RADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEE 180
           RADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEE
Sbjct: 121 RADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEE 180

Query: 181 KKKSKRVYQSPPPEVGLKISRSLKILNAKTGIFSKRMKIIHRDPALHAQRVAAIKKAKGS 240
           KKKSKRVYQSPPPEVGLKISRSLK LNAKTGIFSKRM+IIHRDPALHAQRVAAIKKAKGS
Sbjct: 181 KKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSKRMRIIHRDPALHAQRVAAIKKAKGS 240

Query: 241 AEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYCKNCGREGHRRHYCPELKEDSIDRRF 300
           AEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYCKNCGREGHRRHYCPELKEDSIDRRF
Sbjct: 241 AEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYCKNCGREGHRRHYCPELKEDSIDRRF 300

Query: 301 RCRVCGEKGHNRKTCEKSGLNVTPITATIQRHCGICGLKGHNKRNCQKSDAHRQSHQNVL 360
           RCRVCGEKGHNR+TCEKS LNVTP+  TIQRHCGICGLKGHN+RNCQKSD HRQSHQN+L
Sbjct: 301 RCRVCGEKGHNRRTCEKSVLNVTPMIPTIQRHCGICGLKGHNRRNCQKSDVHRQSHQNML 360

Query: 361 RPNLISEYRASNENRRVRQYHCRICKESGHSQRNCPSTDREGNGLSTRRSYSCKLCHEKG 420
           RPNLISEYR SNENRRVRQ HCRICK+ GHSQ  CPS DREGNGL+TRR Y+CKLCHEKG
Sbjct: 361 RPNLISEYRVSNENRRVRQDHCRICKKGGHSQWKCPSIDREGNGLTTRRLYTCKLCHEKG 420

Query: 421 HNIRTCPNRSTNNLQKNPPVALNQ 445
           HNIRTCP RS N+LQKN PVALNQ
Sbjct: 421 HNIRTCPIRSMNDLQKNLPVALNQ 444

[Close]

BLAST of Cucsa.275470 vs. NCBI nr
Match: gi|659131423|ref|XP_008465678.1| (PREDICTED: uncharacterized protein LOC103503314 isoform X1 [Cucumis melo])

HSP 1 Score: 862.8 bits (2228), Expect = 2.6e-247
Identity = 416/469 (88.70%), Postives = 425/469 (90.62%), Query Frame = 1


Query: 1   MSSSLCFSIPALTPHYWRPKNFRFFLLLQSNRCICFAPRFVASLNNDDSVAIPKPAP--- 60
           MSSSLCFSIPALTPHYWR KNF FFLLLQSNRCICFAPRFVA L NDDSVAIPKPAP   
Sbjct: 1   MSSSLCFSIPALTPHYWRSKNFGFFLLLQSNRCICFAPRFVACLKNDDSVAIPKPAPVFT 60

Query: 61  ----------------------LAFDPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQY 120
                                 LAFDPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQY
Sbjct: 61  SSSFVLDFDRLHSFCLLLLVSQLAFDPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQY 120

Query: 121 IKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWE 180
           IKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWE
Sbjct: 121 IKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWE 180

Query: 181 KARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKILNAKTGIFSK 240
           KARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLK LNAKTGIFSK
Sbjct: 181 KARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSK 240

Query: 241 RMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYC 300
           RM+IIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYC
Sbjct: 241 RMRIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYC 300

Query: 301 KNCGREGHRRHYCPELKEDSIDRRFRCRVCGEKGHNRKTCEKSGLNVTPITATIQRHCGI 360
           KNCGREGHRRHYCPELKEDSIDRRFRCRVCGEKGHNR+TCEKS LNVTP+  TIQRHCGI
Sbjct: 301 KNCGREGHRRHYCPELKEDSIDRRFRCRVCGEKGHNRRTCEKSVLNVTPMIPTIQRHCGI 360

Query: 361 CGLKGHNKRNCQKSDAHRQSHQNVLRPNLISEYRASNENRRVRQYHCRICKESGHSQRNC 420
           CGLKGHN+RNCQKSD HRQSHQN+LRPNLISEYR SNENRRVRQ HCRICK+ GHSQ  C
Sbjct: 361 CGLKGHNRRNCQKSDVHRQSHQNMLRPNLISEYRVSNENRRVRQDHCRICKKGGHSQWKC 420

Query: 421 PSTDREGNGLSTRRSYSCKLCHEKGHNIRTCPNRSTNNLQKNPPVALNQ 445
           PS DREGNGL+TRR Y+CKLCHEKGHNIRTCP RS N+LQKN PVALNQ
Sbjct: 421 PSIDREGNGLTTRRLYTCKLCHEKGHNIRTCPIRSMNDLQKNLPVALNQ 469

[Close]

BLAST of Cucsa.275470 vs. NCBI nr
Match: gi|659131427|ref|XP_008465680.1| (PREDICTED: uncharacterized protein LOC103503314 isoform X3 [Cucumis melo])

HSP 1 Score: 788.9 bits (2036), Expect = 4.7e-225
Identity = 381/427 (89.23%), Postives = 387/427 (90.63%), Query Frame = 1


Query: 1   MSSSLCFSIPALTPHYWRPKNFRFFLLLQSNRCICFAPRFVASLNNDDSVAIPKPAP--- 60
           MSSSLCFSIPALTPHYWR KNF FFLLLQSNRCICFAPRFVA L NDDSVAIPKPAP   
Sbjct: 1   MSSSLCFSIPALTPHYWRSKNFGFFLLLQSNRCICFAPRFVACLKNDDSVAIPKPAPVFT 60

Query: 61  ----------------------LAFDPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQY 120
                                 LAFDPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQY
Sbjct: 61  SSSFVLDFDRLHSFCLLLLVSQLAFDPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQY 120

Query: 121 IKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWE 180
           IKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWE
Sbjct: 121 IKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWE 180

Query: 181 KARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKILNAKTGIFSK 240
           KARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLK LNAKTGIFSK
Sbjct: 181 KARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSK 240

Query: 241 RMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYC 300
           RM+IIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYC
Sbjct: 241 RMRIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYC 300

Query: 301 KNCGREGHRRHYCPELKEDSIDRRFRCRVCGEKGHNRKTCEKSGLNVTPITATIQRHCGI 360
           KNCGREGHRRHYCPELKEDSIDRRFRCRVCGEKGHNR+TCEKS LNVTP+  TIQRHCGI
Sbjct: 301 KNCGREGHRRHYCPELKEDSIDRRFRCRVCGEKGHNRRTCEKSVLNVTPMIPTIQRHCGI 360

Query: 361 CGLKGHNKRNCQKSDAHRQSHQNVLRPNLISEYRASNENRRVRQYHCRICKESGHSQRNC 403
           CGLKGHN+RNCQKSD HRQSHQN+LRPNLISEYR SNENRRVRQ HCRICK+ GHSQ  C
Sbjct: 361 CGLKGHNRRNCQKSDVHRQSHQNMLRPNLISEYRVSNENRRVRQDHCRICKKGGHSQWKC 420

[Close]

BLAST of Cucsa.275470 vs. NCBI nr
Match: gi|659131427|ref|XP_008465680.1| (PREDICTED: uncharacterized protein LOC103503314 isoform X3 [Cucumis melo])

HSP 1 Score: 48.1 bits (113), Expect = 4.5e-02
Identity = 24/67 (35.82%), Postives = 33/67 (49.25%), Query Frame = 1


Query: 373 ENRRVR-------QYHCRICKESGHSQRNCPSTDREGNGLSTRRSYSCKLCHEKGHNIRT 432
           ENRR R       +++C+ C   GH +  CP    +    S  R + C++C EKGHN RT
Sbjct: 284 ENRRKRSSAMKGVKFYCKNCGREGHRRHYCPELKED----SIDRRFRCRVCGEKGHNRRT 343

HSP 2 Score: 788.9 bits (2036), Expect = 4.7e-225
Identity = 381/427 (89.23%), Postives = 387/427 (90.63%), Query Frame = 1


Query: 1   MSSSLCFSIPALTPHYWRPKNFRFFLLLQSNRCICFAPRFVASLNNDDSVAIPKPAP--- 60
           MSSSLCFSIPALTPHYWR KNF FFLLLQSNRCICFAPRFVA L NDDSVAIPKPAP   
Sbjct: 1   MSSSLCFSIPALTPHYWRSKNFGFFLLLQSNRCICFAPRFVACLKNDDSVAIPKPAPVFT 60

Query: 61  ----------------------LAFDPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQY 120
                                 LAFDPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQY
Sbjct: 61  SSSFVLDFDRLHSFCLLLLVSQLAFDPAEELYGLDVDLKPRNSASSAPEPRSWFGPNGQY 120

Query: 121 IKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWE 180
           IKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWE
Sbjct: 121 IKELPCPSCRGRGYAPCTECGIERSRADCSVCNGKGIVTCHQCLGDRVIWEESIDERPWE 180

Query: 181 KARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKILNAKTGIFSK 240
           KARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLK LNAKTGIFSK
Sbjct: 181 KARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGIFSK 240

Query: 241 RMKIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYC 300
           RM+IIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYC
Sbjct: 241 RMRIIHRDPALHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPENRRKRSSAMKGVKFYC 300

Query: 301 KNCGREGHRRHYCPELKEDSIDRRFRCRVCGEKGHNRKTCEKSGLNVTPITATIQRHCGI 360
           KNCGREGHRRHYCPELKEDSIDRRFRCRVCGEKGHNR+TCEKS LNVTP+  TIQRHCGI
Sbjct: 301 KNCGREGHRRHYCPELKEDSIDRRFRCRVCGEKGHNRRTCEKSVLNVTPMIPTIQRHCGI 360

Query: 361 CGLKGHNKRNCQKSDAHRQSHQNVLRPNLISEYRASNENRRVRQYHCRICKESGHSQRNC 403
           CGLKGHN+RNCQKSD HRQSHQN+LRPNLISEYR SNENRRVRQ HCRICK+ GHSQ  C
Sbjct: 361 CGLKGHNRRNCQKSDVHRQSHQNMLRPNLISEYRVSNENRRVRQDHCRICKKGGHSQWKC 420

The following BLAST results are available for this feature:

BLAST of Cucsa.275470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS13_CUCSA	1.3e-269	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G489320 PE=4 SV=1	[more]
D7TND8_VITVI	1.2e-150	67.97	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01710 PE=4 SV=...	[more]
D7TND8_VITVI	3.2e-02	39.34	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01710 PE=4 SV=...	[more]
A0A061EBM7_THECC	1.4e-02	38.24	Zinc knuckle family protein OS=Theobroma cacao GN=TCM_011796 PE=4 SV=1	[more]
V4TJR8_9ROSI	1.8e-143	63.50	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031710mg PE=4 SV=1	[more]

BLAST of Cucsa.275470 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20220.1	3.8e-132	60.41	zinc knuckle (CCHC-type) family protein	[more]

BLAST of Cucsa.275470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449452102\|ref\|XP_004143799.1\|	1.8e-269	100.00	PREDICTED: uncharacterized protein LOC101211176 [Cucumis sativus]	[more]
gi\|659131425\|ref\|XP_008465679.1\|	1.7e-251	93.69	PREDICTED: uncharacterized protein LOC103503314 isoform X2 [Cucumis melo]	[more]
gi\|659131423\|ref\|XP_008465678.1\|	2.6e-247	88.70	PREDICTED: uncharacterized protein LOC103503314 isoform X1 [Cucumis melo]	[more]
gi\|659131427\|ref\|XP_008465680.1\|	4.7e-225	89.23	PREDICTED: uncharacterized protein LOC103503314 isoform X3 [Cucumis melo]	[more]
gi\|659131427\|ref\|XP_008465680.1\|	4.5e-02	35.82	PREDICTED: uncharacterized protein LOC103503314 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001878	Znf_CCHC
IPR025829	Zn_knuckle_CX2CX3GHX4C

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.275470.1	Cucsa.275470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	GENE3D	G3DSA:4.10.60.10		coord: 308..348 score: 2.9E-5coord: 376..429 score: 8.3E-9coord: 273..307 score: 3.
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 412..428 score: 0.38coord: 274..290 score: 0.34coord: 301..317 score: 0.35coord: 332..348 score: 1.2coord: 381..397 score: 0
IPR001878	Zinc finger, CCHC-type	PROFILE	PS50158	ZF_CCHC	coord: 382..397 score: 8.565coord: 275..290 score: 9.323coord: 301..317 score: 8
IPR001878	Zinc finger, CCHC-type	unknown	SSF57756	Retrovirus zinc finger-like domains	coord: 272..318 score: 3.14E-6coord: 371..430 score: 1.0
IPR025829	Zinc knuckle CX2CX3GHX4C	PFAM	PF13696	zf-CCHC_2	coord: 409..428 score: 4.
None	No IPR available	unknown	Coil	Coil	coord: 164..184 scor
None	No IPR available	PANTHER	PTHR23002	ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN	coord: 375..430 score: 3.4E-134coord: 58..349 score: 3.4E
None	No IPR available	PANTHER	PTHR23002:SF11	ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7	coord: 375..430 score: 3.4E-134coord: 58..349 score: 3.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.275470	Cla004747	Watermelon (97103) v1	cgywmB507
Cucsa.275470	Csa5G489320	Cucumber (Chinese Long) v2	cgycuB392
Cucsa.275470	MELO3C002903	Melon (DHL92) v3.5.1	cgymeB460
Cucsa.275470	ClCG09G020660	Watermelon (Charleston Gray)	cgywcgB478
Cucsa.275470	CSPI05G16710	Wild cucumber (PI 183967)	cgycpiB415
Cucsa.275470	CmoCh12G006510	Cucurbita moschata (Rifu)	cgycmoB0761
Cucsa.275470	Lsi02G017220	Bottle gourd (USVL1VR-Ls)	cgylsiB448
Cucsa.275470	Cp4.1LG07g05570	Cucurbita pepo (Zucchini)	cgycpeB0726
Cucsa.275470	MELO3C002903.2	Melon (DHL92) v3.6.1	cgymedB457
Cucsa.275470	CsaV3_5G025730	Cucumber (Chinese Long) v3	cgycucB422
Cucsa.275470	Cla97C09G182080	Watermelon (97103) v2	cgywmbB481
Cucsa.275470	Bhi06G000554	Wax gourd	cgywgoB557

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None