Cucsa.263980 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.263980
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Zinc finger CCCH domain-containing protein
Location	scaffold02330 : 92105 .. 98737 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTCCCAATCTCTCTAATTTTTCTCCATAGCTTTTTTAAAAaaCCtCAATATCCCGTTCTCCACCATAACCCCCTCCGACACTAGGGTTAGGGTTTTTtCCACTTCTTTCTTcTtCTACTTCTTCTTCTTCTTCTtCTTCTTCTtCTTCTTCTTCTTCTTTTCAATTTTTtCTTTTCACTTCCTTCGTTTCTCTAATCTCTGCAACCGTTTGTTCACTCCTTGCTTTTCTCTTGTCGATTTACTTTTCTCGATCTCGATCTGTGCTTCTCTTCAATGGATATGCGCAAGCGAGGGAGGCCCGAAGCTGCCTTCAATTCTAATGGTTCATTTAAGAAGCATAAGCAAGGTTCGTTTTTCTATATTTtAATTTTTTTtATTAAAAaCAAAAAGCTTTTAGTCCATGCTTTGTATGGTTGCTTATAGGAGGGAGGAGAGACAAATTATGTGCTTGGTCATTGCTTTGTTTTGTTCAATGTAGGGGGAGATATGATTGCTGGTTTCTGTTTATTATCCTTTTCTTTTCTTTtCTTTTCTGTAGTTAGAATTGTCGCTTTTACTGTCTTAGTGGATCATCTTGCATTTGTTTCTATGGATTGTTGAGTTGGATTACGAGAATTACTGGCTCCATGTGTTCGTGCTTGTGGTTTACCCTTATAATTGCGTTTATCCAATTTTATCTTTATTGTTTATTTTtCTTTGTTTAAACTAGAGATGACTGGAAATACTCCCTTAGCAAGTGGATCTGCTTCCAGTAGTTCAAGGTGGTTATTATTTGTAGGTTATGCGACTAAGGGAAAGGTCTGTTATCACTAGTGGTGAAATAGGAAAGTGAGTAATTGGACAAATTTTAGAACTATATCTGTTGGTCATGATTTTTGGGACCATTTTAGGGTTTTTGGTCTTCATTGTCATTCTTTAACAAAGTGTCCCATTGGGCTCACGATCAACCATTAATACTTGACTAATTTTTCCAGTAGTCTGTTGGGATTGTTGATGAAAAACAAAGAATCGGGGAGGAAGATACCCTGCCGTATACCTCTTGTCTTGATGCAAGTATTCTACTCCTTGGACTAGTAGCTAGCATTTCTAATGCTTGCTTTGTCTCAAATTTTCTATTTGTTGCGAACTTGAAATTATCGTTAACAGAATTCCTATCAGTTCAATCTCTCCTTTCTTTTATTTTATGTTCTACTGAAGTCCTTATTCACCATTTGGGGGCATTCAGTTGTATGTTGTTTTATCTCTTATTCTTGGCTATTACTTTCAAGCCAGTTAGTAAGAGATAACATGTGGCTTTTAACACTCTAGGATTTTTGTGACTTAGAAGTACTGGTCACCATTCATCAACGTGCTTGTTATCATACTAGGAGCTATCTGTAAACCAGGTTCTTGGTGATTATTTATGTACTGGCTTGGTTATTCCAACTGATACAGTCCATCTCTAAGGAACTACTTTCAGCAGAATCTCCCCCGAAACTTGGTCCTTAACCACACAAAATTCAGGGTGAAACTCAACATGAACATTATTATCACGAGCAAGTTTAGGTACACTAAAAAGATTCTTGGCAATTGTAGGAACACATAAAACATCATTTAGTTTCAGATAGTCATTCTTAAAAACAAGATTCGATGTCCCTAATCGAGATATAGGCAGTTGTGGACCATTACCAACAATAATTCGCTCATTACCTGCATAGTCAACTGGGGAATTCAAGGAGTTTTGATAGGCTGTAATGTGATTCAATGCACCACTGTCAGCATACCAGTTCAGATTTGCCACAACTTCAGGATTAGCAACAGAAGAGTTTGCAACTAGGGCAGTAGGATTAGTGTATTGACCTTGGTTTGGAGTATAATTCGACTCAACTCTGTAATGAGTTTGCTTTGGATTATTAATCTCCTTGTTAAAGTGGAAGAAACAGACTCCTGCTGTATGACTTAAGTTCTCCATACACTTGGCATGTTGGATGTCTGGTAGACGCATTGTTGCAACGCCCACGACCACGGCCCTGTTCTCTAAAGGATGGGTTTGAATTTTTGAACATTTGTTTTGATTTTGTCGATTCTGATATGATCCTCCACTTGAATGGGATCCACTTTGTACCATAGTAACAGATGCAGCATTACTATTAATAGAAAGAGAGATTAGACAAACCAGATTTCAACCTGAGTTGATACTCCAGCCGAGCTTCATAGGCAAGCAAATCAGACTGCATATCAGTCCATGAAATGTCATATTTACCTTGGACTGATATACCTACTGGATATACACTTCATCAAGCCCTGCAAGAACCTGAGAAACAAGATTGCTGACTAAAACAGGGCTACTGGCGAGGGCCAAACCATCAAAATACTTTTTCATTCGTGTAAAATACTCATTCATTTTTTACTATTCTTTGCGAGAAGTATAAAAAAGACATTTGAGATAGTCAATTTCAGAACTATATTGCATTCCAAAGAGCACTTGTACAGCAGCCCATAAATTTTTAGAAGTTTGAAAACCCATTCCATTACCTGTATTGCAATCGCTTGGGTGATTGAGTTGTATATCCAACCCAAAATTAATTGATCAAGAGCAACCCAGGCTTCATATTCTGGGTTTGGAATCTTCTCAGTTAGAACACCAACCGATGCAAAGGAGCCCTCACCTGGAGTGCTTTCTCGATTCACAACTCTAGTAATGGTCCTACACATGGTTTTTCTCCGGTCAGATGACCTTCCCAATGGTAGCTGCCTAAAATATGCCAAACAAGATTTGCCACAGTGGAAATTCTATCCATCTTGATAACCGTAATTTGATTCAAAAGTTAGTTCTGAGGAGGAGGACCAGATATGCACTGGGTGCAGCAATAGAGCTAAAGGTAGATCGACTTGAATGAGCCATTTGAGGCTCTGATACCAACTTAAGTTCCAGAGAAGAAGAAATAACTTGGAGAAGAATTTTTTTCTCTTTCACTATATTGCAACTTGTATTTTCTCTAATGAAATACAAAGGAGAGGTCGGTTTAATTGATAAACAAAGAGAGTAATTACATGAATAAAGAATGAAGAGTATTATCACAGAAAACTATATACGTGCCAACATCCTATTGAGTAAAGCATAACAGACTGGAAACCGTGAAGCTTCTATAGAATGGAATACCCAGATTTGGCTGGGAGAATCCATGTTGCCTGCCACATGTTGCTGACTCACTGTTTTGACTGGTCTGTTTCTTACTAGAATGGTCCTCAATAACCATGTCATTAGATGAGTAACTTAGCCTACCAGCATTTTTGAGTTATATATGCATCTTAGGAGATATGAGTTGAATATGGAAAGGAAAGTTTGAAGAATTGTGACTTAGAACTCAAGGACACAGTTGTATAACCCATAGAATAGATCTTGTTCAAGCAAGGTCGCAGTTCAAGAATTATGACTTTAAGAACAGTTCGTTTGCTACCGTATTCTAAAATTTTTTATATCATCTTTATATATGGTCAACAATCAAGATACCCTTAGGATCAAGACAAAAGTTCAAAAAAAaTTTTGGCTATAAGTTTATTATATCCTTAGGTTAGTCATTTGGACTATATAGAAGGCTTAGAATGGAGGGTTAAAATATTTTATCTACCATTGATAAGATTCAGTTTTAGGTGGGGTTTCCCCTCCCTGTCCCCTTTTATTTGATGTTGGGTCATTTTGTATTTATTACAATTTTAGGTGACCTTGAAATCCAACTGAAACAGTGGACGTTACCCAATTCATATATTAAGAATGTTACCCTACATTAACAGAAAGCTACAAATTATTTAGTAATGTGTTAGTTGCCTAAATAATTTAAATGTAAAGATGTATTAAAGTGTTAGAGTAAAAATCTTAACAAATTATAACTGAGAAAGAACAATTAATGTTTTGCAACAGAATTGGAGTCCTTATCAACTGTAGGGAGCAAATCGAAGCCATGCACCAAGTTTTTCAGGTTCATATCTTACCTACCTAAATAAGTACTTGAACTGTATATTATCTTTCCCTAACGATCTAAACTTGCTGTAAGAATTTAATTGATCACGAGTTTCAAATTAAAGCTGAGTGATTGTGCTTCTGAAAACTGGGAACACAGGTATAAACTATTACTCTAAGCCTTCAACCAAGGGAATAAAATTTTAAAACTGAACTTATTAGTGAGTTTTAGAGTTTTAGAAATTTTCTCAATTATTACAAAACTCGGAGGCTCTCTTTCTCAGTTTTCAGCATATTTTGCTCTACAGAAGAAATATGATCTCATTCTGGTTGATTCAAACTTAGTTTCATCATCTTTTTTtACTTTTAGTTTATTAGTATTTTCGTTTGGTCCAGTTCTATTTTATTAGCTGAAGTCCATTGTTGCATTTATCTTTATAATGCAGTTTGGAGCCTTAATTTCATCTATATATCTCTTATCTGAAAAGAGATGACTTGTCTTCCTTTTCCCCCTGTCACTTAAACAGTTTTACAATATGTTTTTAGAAAACAACTAAAATATTTTGTAGAATAGTCACTTTAAACAGCCCTTCGTTGGAACTGATGGAAGCTGTTCCTAAAAATGGAAAAGAATAGAAAATAGTTCTATAAAATTTTTAGAATAACTTCTAAAATATTTTGTAGAATAGTCACTTAAACAGTCTTTTGTTGGGACTGATTGGAAGCTGTTTCTAAAAGTAAAATCTTGCTTCTTTGAATGAGAAAGAGTGAACTGTACAATTTAAATGTTGGTCGTGGTGGGTTTTTAAATTTAATTTTTAAAACAAAAATTAATATTGTCGTCATCATCACTATCACCATCATCATTTTTTTTTtGTTCTTCTATCCTATCCCCTGTTTAATTCTTAAAAATGATTTGATCTTATAAAGAAAAGATTTTGGTAACACGTTGTGGGGAGGCATTGTTCTGACAGTAAAAGAGGATGGGGTCTTTAGCATTAACAAGAAGTTAGGGTCTGATGGAAGAGGATGTTGATTGCTAAAGATTGCCAAGTAAAGTGCCAAAGACAAAAAGTGGTCTTTTGGGGGAAGCTCGAATATTATTTCCATTCTGTAGAGTCCCAAGAGGGTTTCTTTCATCGTGTTATCTTTCTATGTCATTTGTTGATTTCTCTTGACAAGTTTTTGTCTTAGCTGAAATATTGTCTTTTTCTTTGTAATTCTCTATTTATTTATTTATTTTTATTTCATTCTTAGTGGATTTGGTATCTTTTAAGCATTAATCTCTATTCATTCATCAATAAAAAGTTGCATTTCTTGTTTAGAAAAaTTTTAAAAAaTAAATAAGATATTCCAGGAGGTTTAGGGTTATGATCTATTTGCTAATTCATTTCTAGTGGGGCTATTTCTTACAAAAAGGCTGTTTATAGTTTCTTTTTCAATATAGTGGATTTCTTTTTGTTTGTTTCGTTCTAAAAGTTTCTTTCTTGACATGGAAGAAAGTTGTATTTCAACACAACCCTGAATATCATAGATTTGCAATATGCATTTGTTTGATGCCACTTCTCAATAATATACAACTTCTTGAAGTATTTGGGCTTTTAGCAAGAGGAAAAGATGATATTACCTTATGGCAAAAGATATGCATGCGATTTCATGTGAAATTGGATTTCTCTTGTGTATTGTTTGTACTGTCTAATGAGTGGCAGTCTTTAGATTTATGAATTTCTGTGGGATCCTGCTTTGATCTTTACCAATGTGTTATTTTATCATCTTGGATTTCAGTACTGCTGGTTGCCCATTTGGTGAAAGCTGCCACTTCTTGCACTACGTTCCTGGTGGTTATAATGTTGTAGCCCAAATGATGAATCTTGCTCCTGTTGGTGCTCAACCATCTAGAAATATAGCTGCCCCACCTTCTGTTACTAATGGCGGGCCCTCTGCTCCATCCCAAGTCAAAACTCGCATGTGCAACAAGTACAACACTGCTGAAGGCTGCAAGTTTGGTGATAAATGCAATTTTGCTCATGGAGAGTGGGAACTCGGGAGGCCTAATCCTCCATCTCATGATAATCCTCGTGCTATGGGAGGAGGTGGAGGTGGAGGTGGAGGAGTACATATGGTTGGTCGTATGGGTGGTCGAATGGACCTGCCACCGCCGGGTCCTGCTGCAAGCTTTGGCGCTTCAGCTACTGCAAAGATCAGTATAGATGCCTCCCTTGCTGGAGCGATCATTGGCAAGGGTGGGATCAACTCCAAACAGATTTGTCGTCAAACGGGTGCGAAACTCTCCATCAGGGACCATGAATCGGATCCGAATCTGAGGAACATCGAACTGGAGGGCACTTTTGAGCAAATCAATGAAGCAAGTGCAATGGTGAGAGAGCTAATTATCACAGTTTCGATGGCAGGACCGGGTAAAGCATCTGGCGGGATGGGAGGAGGTCCTGCACCAACAGGTAGCAACTATAAAACAAAGCTATGTGATAATTTTGCGAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCGCACGGGGCTGCTGAGTTACGCAAGTCTGGAGTATGATTAAGTCCCCGATTTTGTCTAGTTTTTATTAAAAGGAAGTTTTGCATTGAAGCGTTCAATCAACACGAGTGCGGTATTTGTAGTTGGGTTCAGGTCCTTCTGTTGTAGCTTTATGAGA

mRNA sequence

CAATTCCCAATCTCTCTAATTTTTCTCCATAGCTTTTTTAAAAAACCTCAATATCCCGTTCTCCACCATAACCCCCTCCGACACTAGGGTTAGGGTTTTTTCCACTTCTttcttcttctacttcttcttcttcttcttcttcttcttcttcttcttcttcttTTCAATTTTTTCTTTTCACTTCCTTCGTTTCTCTAATCTCTGCAACCGTTTGTTCACTCCTTGCTTTTCTCTTGTCGATTTACTTTTCTCGATCTCGATCTGTGCTTCTCTTCAATGGATATGCGCAAGCGAGGGAGGCCCGAAGCTGCCTTCAATTCTAATGGTTCATTTAAGAAGCATAAGCAAGAATTGGAGTCCTTATCAACTGTAGGGAGCAAATCGAAGCCATGCACCAAGTTTTTCAGTACTGCTGGTTGCCCATTTGGTGAAAGCTGCCACTTCTTGCACTACGTTCCTGGTGGTTATAATGTTGTAGCCCAAATGATGAATCTTGCTCCTGTTGGTGCTCAACCATCTAGAAATATAGCTGCCCCACCTTCTGTTACTAATGGCGGGCCCTCTGCTCCATCCCAAGTCAAAACTCGCATGTGCAACAAGTACAACACTGCTGAAGGCTGCAAGTTTGGTGATAAATGCAATTTTGCTCATGGAGAGTGGGAACTCGGGAGGCCTAATCCTCCATCTCATGATAATCCTCGTGCTATGGGAGGAGGTGGAGGTGGAGGTGGAGGAGTACATATGGTTGGTCGTATGGGTGGTCGAATGGACCTGCCACCGCCGGGTCCTGCTGCAAGCTTTGGCGCTTCAGCTACTGCAAAGATCAGTATAGATGCCTCCCTTGCTGGAGCGATCATTGGCAAGGGTGGGATCAACTCCAAACAGATTTGTCGTCAAACGGGTGCGAAACTCTCCATCAGGGACCATGAATCGGATCCGAATCTGAGGAACATCGAACTGGAGGGCACTTTTGAGCAAATCAATGAAGCAAGTGCAATGGTGAGAGAGCTAATTATCACAGTTTCGATGGCAGGACCGGGTAAAGCATCTGGCGGGATGGGAGGAGGTCCTGCACCAACAGGTAGCAACTATAAAACAAAGCTATGTGATAATTTTGCGAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCGCACGGGGCTGCTGAGTTACGCAAGTCTGGAGTATGATTAAGTCCCCGATTTTGTCTAGTTTTTATTAAAAGGAAGTTTTGCATTGAAGCGTTCAATCAACACGAGTGCGGTATTTGTAGTTGGGTTCAGGTCCTTCTGTTGTAGCTTTATGAGA

Coding sequence (CDS)

ATGGATATGCGCAAGCGAGGGAGGCCCGAAGCTGCCTTCAATTCTAATGGTTCATTTAAGAAGCATAAGCAAGAATTGGAGTCCTTATCAACTGTAGGGAGCAAATCGAAGCCATGCACCAAGTTTTTCAGTACTGCTGGTTGCCCATTTGGTGAAAGCTGCCACTTCTTGCACTACGTTCCTGGTGGTTATAATGTTGTAGCCCAAATGATGAATCTTGCTCCTGTTGGTGCTCAACCATCTAGAAATATAGCTGCCCCACCTTCTGTTACTAATGGCGGGCCCTCTGCTCCATCCCAAGTCAAAACTCGCATGTGCAACAAGTACAACACTGCTGAAGGCTGCAAGTTTGGTGATAAATGCAATTTTGCTCATGGAGAGTGGGAACTCGGGAGGCCTAATCCTCCATCTCATGATAATCCTCGTGCTATGGGAGGAGGTGGAGGTGGAGGTGGAGGAGTACATATGGTTGGTCGTATGGGTGGTCGAATGGACCTGCCACCGCCGGGTCCTGCTGCAAGCTTTGGCGCTTCAGCTACTGCAAAGATCAGTATAGATGCCTCCCTTGCTGGAGCGATCATTGGCAAGGGTGGGATCAACTCCAAACAGATTTGTCGTCAAACGGGTGCGAAACTCTCCATCAGGGACCATGAATCGGATCCGAATCTGAGGAACATCGAACTGGAGGGCACTTTTGAGCAAATCAATGAAGCAAGTGCAATGGTGAGAGAGCTAATTATCACAGTTTCGATGGCAGGACCGGGTAAAGCATCTGGCGGGATGGGAGGAGGTCCTGCACCAACAGGTAGCAACTATAAAACAAAGCTATGTGATAATTTTGCGAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCGCACGGGGCTGCTGAGTTACGCAAGTCTGGAGTATGA

Protein sequence

MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV*

Homology

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BLAST of Cucsa.263980 vs. Swiss-Prot
Match: C3H31_ORYSJ (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 7.7e-94
Identity = 187/313 (59.74%), Postives = 212/313 (67.73%), Query Frame = 1


Query: 4   RKRGRPEAAFNSNGSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHYVPG 63
           RKR RP+ A N   +  K  +E ES  T + SK KPCTKFFST GCPFGE CHF H+VPG
Sbjct: 8   RKRSRPDTA-NGGAAGGKRSRETESFQTGLSSKLKPCTKFFSTIGCPFGEGCHFSHFVPG 67

Query: 64  GYNVVAQMMNLA-PVGAQPSRNIAAPPSVTNGGPSAP-SQVKTRMCNKYNTAEGCKFGDK 123
           GY  VA+ +NL  P    P+R   AP     GG S P S  KTRMC KYNTAEGCKFGDK
Sbjct: 68  GYQAVAKTLNLGNPAVPAPAR---APMDHAAGGNSHPASSGKTRMCTKYNTAEGCKFGDK 127

Query: 124 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPG----PAASFG 183
           C+FAHGE ELG+P   SH++  A   GG          R GGR + PPP     PA +FG
Sbjct: 128 CHFAHGERELGKPAYMSHESAMAPPMGG----------RYGGRPEPPPPAAMGPPAGNFG 187

Query: 184 ASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQIN 243
           ASATAKIS+DASLAG IIGKGG+N+KQICR TG KLSIRDHESD NL+NIELEG F+QI 
Sbjct: 188 ASATAKISVDASLAGGIIGKGGVNTKQICRVTGVKLSIRDHESDSNLKNIELEGNFDQIK 247

Query: 244 EASAMVRELIITVSMAGPGKASGGMGGGPAPTG-------SNYKTKLCDNFAKGSCTFGE 303
           +AS MV ELI T+S + P K   G   G AP G       SNYKTKLC+NF KG+CTFG+
Sbjct: 248 QASNMVGELIATISPSTPAKKPAGSAAGAAPAGRGGPGGRSNYKTKLCENFVKGTCTFGD 306

[Close]

BLAST of Cucsa.263980 vs. Swiss-Prot
Match: C3H14_ORYSJ (Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=Os02g0194200 PE=2 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 5.5e-92
Identity = 187/311 (60.13%), Postives = 213/311 (68.49%), Query Frame = 1


Query: 4   RKRGRPEAAFNSNGSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHYVPG 63
           RKRG+P+ A   NG+  K  +E ES  T VGSKSKPCTKFFST+GCPFGE CHFLH+ PG
Sbjct: 6   RKRGKPDGA---NGAGGKRARESESFQTGVGSKSKPCTKFFSTSGCPFGEGCHFLHHFPG 65

Query: 64  GYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGDKCN 123
           GY  VA+M NL      P        +    GP  P+ VKTR+CNKYNTAEGCK+GDKC+
Sbjct: 66  GYQAVAKMTNLGGPAIAPPPGRMPMGNAVPDGPPTPT-VKTRLCNKYNTAEGCKWGDKCH 125

Query: 124 FAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPP-PGPA----ASFGA 183
           FAHGE ELG+P       P  MG             R  G    PP P PA    ASFGA
Sbjct: 126 FAHGERELGKPMLMDSSMPPPMGP------------RPTGHFAPPPMPSPAMSTPASFGA 185

Query: 184 SATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINE 243
           SATAKIS+DASLAG IIG+GG+N+KQI R TGAKL+IRDHESD NL+NIELEGTF+QI  
Sbjct: 186 SATAKISVDASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNIELEGTFDQIKN 245

Query: 244 ASAMVRELIITVSMAGP---GKASGG--MGGGPAPTGSNYKTKLCDNFAKGSCTFGERCH 303
           ASAMVRELI+++    P    K  GG   GGGP   GSN+KTKLC+NF KGSCTFG+RCH
Sbjct: 246 ASAMVRELIVSIGGGAPPQGKKPVGGSHRGGGP---GSNFKTKLCENFTKGSCTFGDRCH 297

[Close]

BLAST of Cucsa.263980 vs. Swiss-Prot
Match: C3H44_ORYSJ (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.9e-85
Identity = 172/308 (55.84%), Postives = 201/308 (65.26%), Query Frame = 1


Query: 5   KRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGGY 64
           KR  PE    +NG+ K+ +    S   VGSK KPCTKFFST+GCPFG SCHFLH  PGGY
Sbjct: 7   KRAAPEG---TNGAAKRARASESSQVGVGSKLKPCTKFFSTSGCPFGSSCHFLHNFPGGY 66

Query: 65  NVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAP-----SQVKTRMCNKYNTAEGCKFGD 124
              A+M +           +AAPP     GP AP     S VKTRMCNKYNTAEGCK+G 
Sbjct: 67  QAAAKMTSHGGTA------VAAPPGRMPLGPGAPNGPPTSSVKTRMCNKYNTAEGCKWGS 126

Query: 125 KCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPP-PGP----AAS 184
           KC+FAHGE ELG+P    +  P  MG                   + PP PGP     ++
Sbjct: 127 KCHFAHGERELGKPMLLDNSMPHPMGSMP---------------FEAPPMPGPDIVPPST 186

Query: 185 FGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQ 244
           FGASATAKIS+DASLAG IIGKGG N+K I R TGAKL+IRD+ES+PNL+NIELEGTF+Q
Sbjct: 187 FGASATAKISVDASLAGGIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKNIELEGTFDQ 246

Query: 245 INEASAMVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFA 303
           I  ASAMV ELI+ +S   P   + G G      GSN+KTKLC+NF KGSCTFG+RCHFA
Sbjct: 247 IKHASAMVTELIVRISGNAPPAKNPGRGSHAGGPGSNFKTKLCENFNKGSCTFGDRCHFA 290

[Close]

BLAST of Cucsa.263980 vs. Swiss-Prot
Match: C3H52_ARATH (Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana GN=At5g06770 PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 5.8e-57
Identity = 119/211 (56.40%), Postives = 144/211 (68.25%), Query Frame = 1


Query: 102 KTRMCNKYNTAEGCKFGDKCNFAH-------GEWELGRPNPPSHDNPRAMGGGGGGGGGV 161
           K++ C K+ +  GC FGD C+F H          ++    PP     R M G GG GG  
Sbjct: 38  KSKPCTKFFSTSGCPFGDNCHFLHYVPGGYNAAAQMTNLRPPVSQVSRNMQGSGGPGG-- 97

Query: 162 HMVGRMGGRMDLPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSI 221
               R  GR D P  GP + FGAS T+KIS+DASLAGAIIGKGGI+SKQICR+TGAKLSI
Sbjct: 98  ----RFSGRGD-PGSGPVSIFGAS-TSKISVDASLAGAIIGKGGIHSKQICRETGAKLSI 157

Query: 222 RDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPAPTGSNYKT 281
           +DHE DPNL+ IELEGTFEQIN AS MVRELI  +      +  GG  G P P GSNYKT
Sbjct: 158 KDHERDPNLKIIELEGTFEQINVASGMVRELIGRLGSVKKPQGIGGPEGKPHP-GSNYKT 217

Query: 282 KLCDNFAKGSCTFGERCHFAHGAAELRKSGV 306
           K+CD ++KG+CT+G+RCHFAHG +ELR+SG+
Sbjct: 218 KICDRYSKGNCTYGDRCHFAHGESELRRSGI 239

HSP 2 Score: 134.0 bits (336), Expect = 2.7e-30
Identity = 67/98 (68.37%), Postives = 77/98 (78.57%), Query Frame = 1


Query: 1  MDMRKRGRPEAA--FNSNGSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFL 60
          MD RKRGRPEAA   NSNG FK+ KQE+ES+ST +GSKSKPCTKFFST+GCPFG++CHFL
Sbjct: 1  MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60

Query: 61 HYVPGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGP 96
          HYVPGGYN  AQM NL P  +Q SRN+       +GGP
Sbjct: 61 HYVPGGYNAAAQMTNLRPPVSQVSRNMQG-----SGGP 93

HSP 3 Score: 44.3 bits (103), Expect = 2.8e-03
Identity = 19/40 (47.50%), Postives = 27/40 (67.50%), Query Frame = 1


Query: 93  GGPSAPSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGR 133
           G P   S  KT++C++Y+    C +GD+C+FAHGE EL R
Sbjct: 198 GKPHPGSNYKTKICDRYSKGN-CTYGDRCHFAHGESELRR 236

[Close]

BLAST of Cucsa.263980 vs. Swiss-Prot
Match: C3H36_ARATH (Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana GN=At3g12130 PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 8.3e-56
Identity = 117/219 (53.42%), Postives = 148/219 (67.58%), Query Frame = 1


Query: 102 KTRMCNKYNTAEGCKFGDKCNFAH---GEW----ELGRPNPPSHDNPRAMGGGGGGGGGV 161
           K++ C K+ +  GC FG+ C+F H   G +    ++    PP     R M G G GG   
Sbjct: 38  KSKPCTKFFSTSGCPFGENCHFLHYVPGGYNAVSQMTNMGPPIPQVSRNMQGSGNGG--- 97

Query: 162 HMVGRMGGRMDLPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSI 221
               R  GR +   PG  ++FG SATA+ S+DASLAGAIIGKGG++SKQICRQTG KLSI
Sbjct: 98  ----RFSGRGE-SGPGHVSNFGDSATARFSVDASLAGAIIGKGGVSSKQICRQTGVKLSI 157

Query: 222 RDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGG--------PA 281
           +DHE DPNL+NI LEGT EQI+EASAMV++LI  ++ A      GG+GGG        P 
Sbjct: 158 QDHERDPNLKNIVLEGTLEQISEASAMVKDLIGRLNSAAKKPPGGGLGGGGGMGSEGKPH 217

Query: 282 PTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 306
           P GSN+KTK+C+ F+KG+CTFG+RCHFAHG AELRKSG+
Sbjct: 218 P-GSNFKTKICERFSKGNCTFGDRCHFAHGEAELRKSGI 247

HSP 2 Score: 129.8 bits (325), Expect = 5.1e-29
Identity = 70/117 (59.83%), Postives = 83/117 (70.94%), Query Frame = 1


Query: 1   MDMRKRGRPEA-AFNSNGS-FKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFL 60
           MD RKRGRPEA +FNSNG  +KK KQE+ES ST +GSKSKPCTKFFST+GCPFGE+CHFL
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60

Query: 61  HYVPGGYNVVAQMMNLAPVGAQPSRNI--------------AAPPSVTNGGPSAPSQ 101
           HYVPGGYN V+QM N+ P   Q SRN+              + P  V+N G SA ++
Sbjct: 61  HYVPGGYNAVSQMTNMGPPIPQVSRNMQGSGNGGRFSGRGESGPGHVSNFGDSATAR 117

HSP 3 Score: 42.7 bits (99), Expect = 8.2e-03
Identity = 18/40 (45.00%), Postives = 26/40 (65.00%), Query Frame = 1


Query: 91  TNGGPSAPSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWEL 131
           + G P   S  KT++C +++    C FGD+C+FAHGE EL
Sbjct: 204 SEGKPHPGSNFKTKICERFSKGN-CTFGDRCHFAHGEAEL 242

[Close]

BLAST of Cucsa.263980 vs. TrEMBL
Match: A0A0A0KZ79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507380 PE=4 SV=1)

HSP 1 Score: 636.7 bits (1641), Expect = 1.4e-179
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 1


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGDK 120
           PGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASAT 180
           CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASAT
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASAT 180

Query: 181 AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA 240
           AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA
Sbjct: 181 AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA 240

Query: 241 MVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300
           MVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
Sbjct: 241 MVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300

Query: 301 RKSGV 306
           RKSGV
Sbjct: 301 RKSGV 305

[Close]

BLAST of Cucsa.263980 vs. TrEMBL
Match: M5W9V3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009316mg PE=4 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 7.4e-128
Identity = 237/308 (76.95%), Postives = 260/308 (84.42%), Query Frame = 1


Query: 1   MDMRKRGRPEA-AFNSNGSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLH 60
           MD RKRGR EA AF++NG FKK+KQELES ST VGSKSKPCTKFFSTAGCPFGESCHFLH
Sbjct: 2   MDTRKRGRHEAGAFHANGGFKKNKQELESFSTGVGSKSKPCTKFFSTAGCPFGESCHFLH 61

Query: 61  YVPGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFG 120
           YVPGGYN VAQMMNLAP   Q SRNIA PPS +NG  S+ S VK+R+CNKYN+AEGCKFG
Sbjct: 62  YVPGGYNAVAQMMNLAPA-PQASRNIAPPPSNSNG--SSSSAVKSRLCNKYNSAEGCKFG 121

Query: 121 DKCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGAS 180
           DKC+FAHGEWELG+    SHD+PRAMG G G         RM   M+ P  GPA+SFGAS
Sbjct: 122 DKCHFAHGEWELGKHLAQSHDDPRAMGPGPG---------RMTNWMEPPLAGPASSFGAS 181

Query: 181 ATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEA 240
           +TAKIS+DASLAGAIIGKGG+NSKQICRQTGAKLSIR+HESDPNLRNIELEGTFEQI +A
Sbjct: 182 STAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGTFEQIQQA 241

Query: 241 SAMVRELIITVSMAGPGKA-SGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGA 300
           SAMVRELI+TVSM+GP K   GG  G PAP GSNYKTKLCDNF KG+CTFG+RCHFAHGA
Sbjct: 242 SAMVRELIVTVSMSGPAKTPGGGAPGAPAPPGSNYKTKLCDNFTKGTCTFGDRCHFAHGA 297

Query: 301 AELRKSGV 306
           AELRKSG+
Sbjct: 302 AELRKSGM 297

[Close]

BLAST of Cucsa.263980 vs. TrEMBL
Match: A0A067JYK9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25535 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 3.1e-126
Identity = 224/306 (73.20%), Postives = 256/306 (83.66%), Query Frame = 1


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHY 60
           MD+RKRGRPEA FN+ G FKK+KQE++SLST VGSKSKPCTKFFSTAGCPFGESCHFLHY
Sbjct: 1   MDIRKRGRPEAGFNAGGGFKKYKQEMDSLSTGVGSKSKPCTKFFSTAGCPFGESCHFLHY 60

Query: 61  VPGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGD 120
           VPGGYN VAQMMNLAP     SRNIAAPP+V+NG  S    VK+R+CNKYN+AEGCKFGD
Sbjct: 61  VPGGYNAVAQMMNLAPAVTPVSRNIAAPPAVSNG--STQPLVKSRLCNKYNSAEGCKFGD 120

Query: 121 KCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASA 180
           KC FAHGEWELG+   PSHD+PR +G          + GRMGGRM+  PPGPAA+FGASA
Sbjct: 121 KCRFAHGEWELGKAVAPSHDDPRTIGT---------IPGRMGGRMEPTPPGPAANFGASA 180

Query: 181 TAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEAS 240
           TAKI+++ASLAGAIIGKGG+NSKQICRQTGAKLSIR+HE+DPNLRNIE EG+FEQI +AS
Sbjct: 181 TAKIAVEASLAGAIIGKGGVNSKQICRQTGAKLSIREHETDPNLRNIEFEGSFEQIRQAS 240

Query: 241 AMVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAE 300
           +M+ ELI +VS+A     S G  GG A  GSN+KTKLC+NF KGSCTFG++CHFAHGAAE
Sbjct: 241 SMISELIASVSLANSSAKSMGAPGGHAHPGSNFKTKLCENFTKGSCTFGQKCHFAHGAAE 295

Query: 301 LRKSGV 306
           LRKSGV
Sbjct: 301 LRKSGV 295

[Close]

BLAST of Cucsa.263980 vs. TrEMBL
Match: C6TAD1_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 4.1e-126
Identity = 226/306 (73.86%), Postives = 253/306 (82.68%), Query Frame = 1


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHY 60
           MD RKRGRPE  F+ NG FKK KQE+ESLST VGSKSKPCTKFFSTAGCPFGE CHFLHY
Sbjct: 1   MDTRKRGRPEPGFSLNGGFKKSKQEMESLSTGVGSKSKPCTKFFSTAGCPFGEGCHFLHY 60

Query: 61  VPGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGD 120
           VPGGYN VA MMNL P     SRN+AAPP V NG  SAP  VKTR+CNK+NTAEGCKFGD
Sbjct: 61  VPGGYNAVAHMMNLTPAAPPASRNVAAPPPVPNG--SAPPAVKTRICNKFNTAEGCKFGD 120

Query: 121 KCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASA 180
           KC+FAHGEWELG+   PS D+ R MG  G        VGR+ GRM+ PPPGPAASFGA+A
Sbjct: 121 KCHFAHGEWELGKHIAPSFDDHRTMGPTG--------VGRLAGRME-PPPGPAASFGANA 180

Query: 181 TAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEAS 240
           TAKIS++ASLAGAIIGKGG+NSKQICRQTGAKLSIR+HESDPNLRNIELEG+F QI EAS
Sbjct: 181 TAKISVEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGSFVQIKEAS 240

Query: 241 AMVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAE 300
            MV++L++T+ M+ P K + G+ G PA  GSN+KTKLC+NF KGSCTFG+RCHFAHGAAE
Sbjct: 241 NMVKDLLLTLQMSAPPKTTPGVPGAPASHGSNFKTKLCENFTKGSCTFGDRCHFAHGAAE 295

Query: 301 LRKSGV 306
           LRKSGV
Sbjct: 301 LRKSGV 295

[Close]

BLAST of Cucsa.263980 vs. TrEMBL
Match: I1N979_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G147100 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 9.1e-126
Identity = 226/306 (73.86%), Postives = 253/306 (82.68%), Query Frame = 1


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLHY 60
           MD RKRGRPE  F+ NG FKK KQE+ESLST VGSKSKPCTKFFSTAGCPFGE CHFLHY
Sbjct: 1   MDTRKRGRPEPGFSLNGGFKKSKQEMESLSTGVGSKSKPCTKFFSTAGCPFGEGCHFLHY 60

Query: 61  VPGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGD 120
           VPGGYN VA MMNL P     SRN+AA P V NG  SAP  VKTR+CNK+NTAEGCKFGD
Sbjct: 61  VPGGYNAVAHMMNLTPAAPPASRNVAALPPVPNG--SAPPAVKTRICNKFNTAEGCKFGD 120

Query: 121 KCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASA 180
           KC+FAHGEWELG+   PS D+ R MG  G        VGR+ GRM+ PPPGPAASFGA+A
Sbjct: 121 KCHFAHGEWELGKHIAPSFDDHRTMGPTG--------VGRLAGRME-PPPGPAASFGANA 180

Query: 181 TAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEAS 240
           TAKIS++ASLAGAIIGKGG+NSKQICRQTGAKLSIR+HESDPNLRNIELEG+FEQI EAS
Sbjct: 181 TAKISVEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGSFEQIKEAS 240

Query: 241 AMVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAE 300
            MV++L++T+ M+ P K + G+ G PA  GSN+KTKLC+NF KGSCTFG+RCHFAHGAAE
Sbjct: 241 NMVKDLLLTLQMSAPPKTTPGVPGAPASHGSNFKTKLCENFTKGSCTFGDRCHFAHGAAE 295

Query: 301 LRKSGV 306
           LRKSGV
Sbjct: 301 LRKSGV 295

[Close]

BLAST of Cucsa.263980 vs. TAIR10
Match: AT5G06770.1 (AT5G06770.1 KH domain-containing protein / zinc finger (CCCH type) family protein)

HSP 1 Score: 222.6 bits (566), Expect = 3.3e-58
Identity = 119/211 (56.40%), Postives = 144/211 (68.25%), Query Frame = 1


Query: 102 KTRMCNKYNTAEGCKFGDKCNFAH-------GEWELGRPNPPSHDNPRAMGGGGGGGGGV 161
           K++ C K+ +  GC FGD C+F H          ++    PP     R M G GG GG  
Sbjct: 38  KSKPCTKFFSTSGCPFGDNCHFLHYVPGGYNAAAQMTNLRPPVSQVSRNMQGSGGPGG-- 97

Query: 162 HMVGRMGGRMDLPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSI 221
               R  GR D P  GP + FGAS T+KIS+DASLAGAIIGKGGI+SKQICR+TGAKLSI
Sbjct: 98  ----RFSGRGD-PGSGPVSIFGAS-TSKISVDASLAGAIIGKGGIHSKQICRETGAKLSI 157

Query: 222 RDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGGPAPTGSNYKT 281
           +DHE DPNL+ IELEGTFEQIN AS MVRELI  +      +  GG  G P P GSNYKT
Sbjct: 158 KDHERDPNLKIIELEGTFEQINVASGMVRELIGRLGSVKKPQGIGGPEGKPHP-GSNYKT 217

Query: 282 KLCDNFAKGSCTFGERCHFAHGAAELRKSGV 306
           K+CD ++KG+CT+G+RCHFAHG +ELR+SG+
Sbjct: 218 KICDRYSKGNCTYGDRCHFAHGESELRRSGI 239

HSP 2 Score: 134.0 bits (336), Expect = 1.5e-31
Identity = 67/98 (68.37%), Postives = 77/98 (78.57%), Query Frame = 1


Query: 1  MDMRKRGRPEAA--FNSNGSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFL 60
          MD RKRGRPEAA   NSNG FK+ KQE+ES+ST +GSKSKPCTKFFST+GCPFG++CHFL
Sbjct: 1  MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60

Query: 61 HYVPGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGP 96
          HYVPGGYN  AQM NL P  +Q SRN+       +GGP
Sbjct: 61 HYVPGGYNAAAQMTNLRPPVSQVSRNMQG-----SGGP 93

HSP 3 Score: 44.3 bits (103), Expect = 1.6e-04
Identity = 19/40 (47.50%), Postives = 27/40 (67.50%), Query Frame = 1


Query: 93  GGPSAPSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGR 133
           G P   S  KT++C++Y+    C +GD+C+FAHGE EL R
Sbjct: 198 GKPHPGSNYKTKICDRYSKGN-CTYGDRCHFAHGESELRR 236

[Close]

BLAST of Cucsa.263980 vs. TAIR10
Match: AT3G12130.1 (AT3G12130.1 KH domain-containing protein / zinc finger (CCCH type) family protein)

HSP 1 Score: 218.8 bits (556), Expect = 4.7e-57
Identity = 117/219 (53.42%), Postives = 148/219 (67.58%), Query Frame = 1


Query: 102 KTRMCNKYNTAEGCKFGDKCNFAH---GEW----ELGRPNPPSHDNPRAMGGGGGGGGGV 161
           K++ C K+ +  GC FG+ C+F H   G +    ++    PP     R M G G GG   
Sbjct: 38  KSKPCTKFFSTSGCPFGENCHFLHYVPGGYNAVSQMTNMGPPIPQVSRNMQGSGNGG--- 97

Query: 162 HMVGRMGGRMDLPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSI 221
               R  GR +   PG  ++FG SATA+ S+DASLAGAIIGKGG++SKQICRQTG KLSI
Sbjct: 98  ----RFSGRGE-SGPGHVSNFGDSATARFSVDASLAGAIIGKGGVSSKQICRQTGVKLSI 157

Query: 222 RDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGGG--------PA 281
           +DHE DPNL+NI LEGT EQI+EASAMV++LI  ++ A      GG+GGG        P 
Sbjct: 158 QDHERDPNLKNIVLEGTLEQISEASAMVKDLIGRLNSAAKKPPGGGLGGGGGMGSEGKPH 217

Query: 282 PTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 306
           P GSN+KTK+C+ F+KG+CTFG+RCHFAHG AELRKSG+
Sbjct: 218 P-GSNFKTKICERFSKGNCTFGDRCHFAHGEAELRKSGI 247

HSP 2 Score: 129.8 bits (325), Expect = 2.9e-30
Identity = 70/117 (59.83%), Postives = 83/117 (70.94%), Query Frame = 1


Query: 1   MDMRKRGRPEA-AFNSNGS-FKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFL 60
           MD RKRGRPEA +FNSNG  +KK KQE+ES ST +GSKSKPCTKFFST+GCPFGE+CHFL
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60

Query: 61  HYVPGGYNVVAQMMNLAPVGAQPSRNI--------------AAPPSVTNGGPSAPSQ 101
           HYVPGGYN V+QM N+ P   Q SRN+              + P  V+N G SA ++
Sbjct: 61  HYVPGGYNAVSQMTNMGPPIPQVSRNMQGSGNGGRFSGRGESGPGHVSNFGDSATAR 117

HSP 3 Score: 42.7 bits (99), Expect = 4.6e-04
Identity = 18/40 (45.00%), Postives = 26/40 (65.00%), Query Frame = 1


Query: 91  TNGGPSAPSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWEL 131
           + G P   S  KT++C +++    C FGD+C+FAHGE EL
Sbjct: 204 SEGKPHPGSNFKTKICERFSKGN-CTFGDRCHFAHGEAEL 242

[Close]

BLAST of Cucsa.263980 vs. TAIR10
Match: AT1G32360.1 (AT1G32360.1 Zinc finger (CCCH-type) family protein)

HSP 1 Score: 66.2 bits (160), Expect = 3.9e-11
Identity = 43/120 (35.83%), Postives = 55/120 (45.83%), Query Frame = 1


Query: 35  KSKPCTKFFSTAGCPFGESCHFLHYVPGGYNVVAQMMNLAPVG-AQPSRNIAAPPSVTNG 94
           K + C KF++  GCP+GESC FLH      N  +  ++L P G        +   SV  G
Sbjct: 174 KGRHCKKFYTEEGCPYGESCTFLHD-EASRNRESVAISLGPGGYGSGGGGGSGGGSVGGG 233

Query: 95  GPSA---------------------PSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGR 133
           G S+                     PS  KTR+CNK+     C FG KC+FAHG  EL R
Sbjct: 234 GSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHR 292

HSP 2 Score: 52.4 bits (124), Expect = 5.8e-07
Identity = 29/67 (43.28%), Postives = 40/67 (59.70%), Query Frame = 1


Query: 250 SMAGPGKAS-----GGMGGGPAPTG------SNYKTKLCDNFA-KGSCTFGERCHFAHGA 305
           S+ G G +S     GG GG  + +G      SN+KT++C+ +   G C FG +CHFAHGA
Sbjct: 228 SVGGGGSSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGA 287

[Close]

BLAST of Cucsa.263980 vs. TAIR10
Match: AT3G19360.1 (AT3G19360.1 Zinc finger (CCCH-type) family protein)

HSP 1 Score: 62.4 bits (150), Expect = 5.6e-10
Identity = 65/225 (28.89%), Postives = 86/225 (38.22%), Query Frame = 1


Query: 80  PSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGDKCNFAHGEWELGRPNPPSHD 139
           PS N   PP V  G  +A    KTRMC K+  A  C+ G+ CNFAHG  +L +P  PS  
Sbjct: 89  PSLN---PPPVNKG--TANIFYKTRMCAKFR-AGTCRNGELCNFAHGIEDLRQP--PS-- 148

Query: 140 NPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATAKISIDASLAGAIIGKGGI 199
           N + + G    G             + P   P  +       KI +   L          
Sbjct: 149 NWQEIVGPPPAGQDRERERERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGEEC 208

Query: 200 NSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIITVSMAGPGKASG 259
                C      LS +  E    LR   +        +  +     +I V+  G      
Sbjct: 209 PYGDRCNFIHEDLS-KFREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPA 268

Query: 260 GMGGGPAPTGSNYKTKLCDNF-AKGSCTFGERCHFAHGAAELRKS 304
            M  G       +KT+LC  F   G C FG++CHFAHG AEL  S
Sbjct: 269 PMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELHNS 302

HSP 2 Score: 62.0 bits (149), Expect = 7.4e-10
Identity = 44/146 (30.14%), Postives = 68/146 (46.58%), Query Frame = 1


Query: 4   RKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYVPGG 63
           R+R RP  A   N +++  ++ +        + K C KF     CP+G+ C+F+H     
Sbjct: 161 RERERPSLAPVVNNNWEDDQKII-------LRMKLCRKFCFGEECPYGDRCNFIHEDLSK 220

Query: 64  YNVVAQMM---NLAPVGA----QPSR------------NIAAPPSVTNGGPSAPSQVKTR 123
           +   +  +   ++  VGA    QPS             +I  P  + NGG       KTR
Sbjct: 221 FREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVPAPMNNGGVVKTVYWKTR 280

Query: 124 MCNKYNTAEGCKFGDKCNFAHGEWEL 131
           +C K++    C FGDKC+FAHG+ EL
Sbjct: 281 LCMKFDITGQCPFGDKCHFAHGQAEL 299

[Close]

BLAST of Cucsa.263980 vs. TAIR10
Match: AT2G25970.1 (AT2G25970.1 KH domain-containing protein)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-08
Identity = 38/101 (37.62%), Postives = 57/101 (56.44%), Query Frame = 1


Query: 168 PPGPAASFGA--SATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSI-RDHESDPN-- 227
           P     S+G+    T KI I     G IIGKGG   K +  Q+GAK+ + RD ++DPN  
Sbjct: 121 PSSIPVSYGSFQGTTKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNCA 180

Query: 228 LRNIELEGTFEQINEASAMVRELIITVSMAGPGKASGGMGG 264
            R ++L GT +QI++A  ++ + ++  + AG    SGG GG
Sbjct: 181 TRTVDLTGTPDQISKAEQLITD-VLQEAEAGNTAGSGGGGG 220

[Close]

BLAST of Cucsa.263980 vs. NCBI nr
Match: gi|449457299|ref|XP_004146386.1| (PREDICTED: zinc finger CCCH domain-containing protein 31-like [Cucumis sativus])

HSP 1 Score: 636.7 bits (1641), Expect = 2.1e-179
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 1


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGDK 120
           PGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASAT 180
           CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASAT
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASAT 180

Query: 181 AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA 240
           AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA
Sbjct: 181 AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA 240

Query: 241 MVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300
           MVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
Sbjct: 241 MVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300

Query: 301 RKSGV 306
           RKSGV
Sbjct: 301 RKSGV 305

[Close]

BLAST of Cucsa.263980 vs. NCBI nr
Match: gi|659082915|ref|XP_008442098.1| (PREDICTED: zinc finger CCCH domain-containing protein 36-like [Cucumis melo])

HSP 1 Score: 624.8 bits (1610), Expect = 8.1e-176
Identity = 301/305 (98.69%), Postives = 303/305 (99.34%), Query Frame = 1


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGDK 120
           PGGYNVVAQMMNLAPVGAQPSRN+AAPPSVTNGG SAPSQVKTRMCNK+NTAEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASAT 180
           CNFAHGEWELGRPNPPSHDNPRAMGGGG GGGGVHMVGRMGGRMDLPPPGPAASFGASAT
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGG-GGGGVHMVGRMGGRMDLPPPGPAASFGASAT 180

Query: 181 AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA 240
           AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA
Sbjct: 181 AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA 240

Query: 241 MVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300
           MVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
Sbjct: 241 MVRELIITVSMAGPGKASGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300

Query: 301 RKSGV 306
           RKSGV
Sbjct: 301 RKSGV 304

[Close]

BLAST of Cucsa.263980 vs. NCBI nr
Match: gi|645271493|ref|XP_008240939.1| (PREDICTED: zinc finger CCCH domain-containing protein 14 [Prunus mume])

HSP 1 Score: 466.1 bits (1198), Expect = 4.8e-128
Identity = 238/308 (77.27%), Postives = 260/308 (84.42%), Query Frame = 1


Query: 1   MDMRKRGRPEA-AFNSNGSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLH 60
           MD RKRGR EA AF++NG FKK+KQELES ST VGSKSKPCTKFFSTAGCPFGESCHFLH
Sbjct: 2   MDTRKRGRHEAGAFHANGGFKKNKQELESFSTGVGSKSKPCTKFFSTAGCPFGESCHFLH 61

Query: 61  YVPGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFG 120
           YVPGGYN VAQMMNLAP   Q SRNIA PPS +NG  S+ S VK+R+CNKYN+AEGCKFG
Sbjct: 62  YVPGGYNAVAQMMNLAPA-PQASRNIAPPPSNSNG--SSSSAVKSRLCNKYNSAEGCKFG 121

Query: 121 DKCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGAS 180
           DKC+FAHGEWELG+    SHD+PRAMG G G         RM   M+ P  GPA+SFGAS
Sbjct: 122 DKCHFAHGEWELGKHLAQSHDDPRAMGPGPG---------RMTNWMEPPLAGPASSFGAS 181

Query: 181 ATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEA 240
           +TAKIS+DASLAGAIIGKGG+NSKQICRQTGAKLSIR+HESDPNLRNIELEGTFEQI +A
Sbjct: 182 STAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGTFEQIQQA 241

Query: 241 SAMVRELIITVSMAGPGKA-SGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGA 300
           SAMVRELI+TVSM+GP K   GG  G PAP GSNYKTKLCDNF KG+CTFGERCHFAHGA
Sbjct: 242 SAMVRELIVTVSMSGPAKTPGGGAPGAPAPPGSNYKTKLCDNFTKGTCTFGERCHFAHGA 297

Query: 301 AELRKSGV 306
           AELRKSG+
Sbjct: 302 AELRKSGM 297

[Close]

BLAST of Cucsa.263980 vs. NCBI nr
Match: gi|595805980|ref|XP_007202376.1| (hypothetical protein PRUPE_ppa009316mg [Prunus persica])

HSP 1 Score: 464.9 bits (1195), Expect = 1.1e-127
Identity = 237/308 (76.95%), Postives = 260/308 (84.42%), Query Frame = 1


Query: 1   MDMRKRGRPEA-AFNSNGSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLH 60
           MD RKRGR EA AF++NG FKK+KQELES ST VGSKSKPCTKFFSTAGCPFGESCHFLH
Sbjct: 2   MDTRKRGRHEAGAFHANGGFKKNKQELESFSTGVGSKSKPCTKFFSTAGCPFGESCHFLH 61

Query: 61  YVPGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFG 120
           YVPGGYN VAQMMNLAP   Q SRNIA PPS +NG  S+ S VK+R+CNKYN+AEGCKFG
Sbjct: 62  YVPGGYNAVAQMMNLAPA-PQASRNIAPPPSNSNG--SSSSAVKSRLCNKYNSAEGCKFG 121

Query: 121 DKCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGAS 180
           DKC+FAHGEWELG+    SHD+PRAMG G G         RM   M+ P  GPA+SFGAS
Sbjct: 122 DKCHFAHGEWELGKHLAQSHDDPRAMGPGPG---------RMTNWMEPPLAGPASSFGAS 181

Query: 181 ATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEA 240
           +TAKIS+DASLAGAIIGKGG+NSKQICRQTGAKLSIR+HESDPNLRNIELEGTFEQI +A
Sbjct: 182 STAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGTFEQIQQA 241

Query: 241 SAMVRELIITVSMAGPGKA-SGGMGGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGA 300
           SAMVRELI+TVSM+GP K   GG  G PAP GSNYKTKLCDNF KG+CTFG+RCHFAHGA
Sbjct: 242 SAMVRELIVTVSMSGPAKTPGGGAPGAPAPPGSNYKTKLCDNFTKGTCTFGDRCHFAHGA 297

Query: 301 AELRKSGV 306
           AELRKSG+
Sbjct: 302 AELRKSGM 297

[Close]

BLAST of Cucsa.263980 vs. NCBI nr
Match: gi|658062904|ref|XP_008367363.1| (PREDICTED: zinc finger CCCH domain-containing protein 14-like [Malus domestica])

HSP 1 Score: 461.1 bits (1185), Expect = 1.5e-126
Identity = 236/310 (76.13%), Postives = 258/310 (83.23%), Query Frame = 1


Query: 1   MDMRKRGRPEAA-FNSNGSFKKHKQELESLST-VGSKSKPCTKFFSTAGCPFGESCHFLH 60
           MD RKRGR E   F+SNG FKK+KQELES ST VGSKSKPCTKFFSTAGCPFGESCHFLH
Sbjct: 1   MDTRKRGRHEGGGFHSNGGFKKNKQELESFSTGVGSKSKPCTKFFSTAGCPFGESCHFLH 60

Query: 61  YVPGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFG 120
           YVPGGYN VAQMMNLAP    P RNI+ PPS +NG  S  S VK+R+CNKYN+AEGCKFG
Sbjct: 61  YVPGGYNAVAQMMNLAPA-PXPPRNISGPPSNSNGSNS--SGVKSRICNKYNSAEGCKFG 120

Query: 121 DKCNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGAS 180
           DKC+FAHGEWELG+P   +HD+PRAMG G G         RMG  M+     PA+SFGAS
Sbjct: 121 DKCHFAHGEWELGKPLAQTHDDPRAMGPGPG---------RMGNWMEPHAARPASSFGAS 180

Query: 181 ATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEA 240
           +TAKIS+DASLAGAIIGKGG++SKQICRQTGAKLSIRDHES+PNLRNIELEGTFEQI +A
Sbjct: 181 STAKISVDASLAGAIIGKGGVHSKQICRQTGAKLSIRDHESNPNLRNIELEGTFEQIQQA 240

Query: 241 SAMVRELIITVSMAGPGKASGGMGGG---PAPTGSNYKTKLCDNFAKGSCTFGERCHFAH 300
           SAMV ELI TVS++GPGKA GG GGG   PAP GSNYKTKLCDNF KG+CTFGERCHFAH
Sbjct: 241 SAMVSELIATVSISGPGKAPGGGGGGPGAPAPPGSNYKTKLCDNFTKGTCTFGERCHFAH 298

Query: 301 GAAELRKSGV 306
           GAAELRKSGV
Sbjct: 301 GAAELRKSGV 298

The following BLAST results are available for this feature:

BLAST of Cucsa.263980 vs. Swiss-Prot


Match Name	E-value	Identity	Description
C3H31_ORYSJ	7.7e-94	59.74	Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica GN...	[more]
C3H14_ORYSJ	5.5e-92	60.13	Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica GN...	[more]
C3H44_ORYSJ	2.9e-85	55.84	Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica GN...	[more]
C3H52_ARATH	5.8e-57	56.40	Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana GN=At5g067...	[more]
C3H36_ARATH	8.3e-56	53.42	Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana GN=At3g121...	[more]

BLAST of Cucsa.263980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ79_CUCSA	1.4e-179	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507380 PE=4 SV=1	[more]
M5W9V3_PRUPE	7.4e-128	76.95	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009316mg PE=4 SV=1	[more]
A0A067JYK9_JATCU	3.1e-126	73.20	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25535 PE=4 SV=1	[more]
C6TAD1_SOYBN	4.1e-126	73.86	Putative uncharacterized protein OS=Glycine max PE=2 SV=1	[more]
I1N979_SOYBN	9.1e-126	73.86	Uncharacterized protein OS=Glycine max GN=GLYMA_19G147100 PE=4 SV=1	[more]

BLAST of Cucsa.263980 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06770.1	3.3e-58	56.40	KH domain-containing protein / zinc finger (CCCH type) family protei...	[more]
AT3G12130.1	4.7e-57	53.42	KH domain-containing protein / zinc finger (CCCH type) family protei...	[more]
AT1G32360.1	3.9e-11	35.83	Zinc finger (CCCH-type) family protein	[more]
AT3G19360.1	5.6e-10	28.89	Zinc finger (CCCH-type) family protein	[more]
AT2G25970.1	1.1e-08	37.62	KH domain-containing protein	[more]

BLAST of Cucsa.263980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457299\|ref\|XP_004146386.1\|	2.1e-179	100.00	PREDICTED: zinc finger CCCH domain-containing protein 31-like [Cucumis sativus]	[more]
gi\|659082915\|ref\|XP_008442098.1\|	8.1e-176	98.69	PREDICTED: zinc finger CCCH domain-containing protein 36-like [Cucumis melo]	[more]
gi\|645271493\|ref\|XP_008240939.1\|	4.8e-128	77.27	PREDICTED: zinc finger CCCH domain-containing protein 14 [Prunus mume]	[more]
gi\|595805980\|ref\|XP_007202376.1\|	1.1e-127	76.95	hypothetical protein PRUPE_ppa009316mg [Prunus persica]	[more]
gi\|658062904\|ref\|XP_008367363.1\|	1.5e-126	76.13	PREDICTED: zinc finger CCCH domain-containing protein 14-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000571	Znf_CCCH
IPR004087	KH_dom
IPR004088	KH_dom_type_1
IPR000571	Znf_CCCH
IPR004087	KH_dom
IPR004088	KH_dom_type_1

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0003676	nucleic acid binding
GO:0003723	RNA binding
GO:0046872	metal ion binding
GO:0003676	nucleic acid binding
GO:0003723	RNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.263980.1	Cucsa.263980.1	mRNA
Cucsa.263980.2	Cucsa.263980.2	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	GENE3D	G3DSA:4.10.1000.10		coord: 198..233 score: 7.0E-17coord: 29..62 score: 3.0
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 33..58 score: 1.9E-5coord: 203..227 score: 8.4
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 202..228 score: 6.0E-8coord: 31..58 score: 0
IPR000571	Zinc finger, CCCH-type	PROFILE	PS50103	ZF_C3H1	coord: 202..229 score: 16.558coord: 31..59 score: 13
IPR000571	Zinc finger, CCCH-type	unknown	SSF90229	CCCH zinc finger	coord: 30..62 score: 3.14E-8coord: 201..232 score: 5.6
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 108..178 score: 7.3
IPR004088	K Homology domain, type 1	GENE3D	G3DSA:3.30.1370.10		coord: 108..177 score: 4.4
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 111..175 score: 3.8
IPR004088	K Homology domain, type 1	PROFILE	PS50084	KH_TYPE_1	coord: 109..173 score: 14
IPR004088	K Homology domain, type 1	unknown	SSF54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 98..179 score: 2.34
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 30..233 score: 1.2E
None	No IPR available	PANTHER	PTHR10288:SF154	SUBFAMILY NOT NAMED	coord: 30..233 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.263980	Csa4G507380	Cucumber (Chinese Long) v2	cgycuB381
Cucsa.263980	MELO3C008908	Melon (DHL92) v3.5.1	cgymeB444
Cucsa.263980	CSPI04G20280	Wild cucumber (PI 183967)	cgycpiB401
Cucsa.263980	CmaCh03G000290	Cucurbita maxima (Rimu)	cgycmaB0741
Cucsa.263980	CmoCh03G000290	Cucurbita moschata (Rifu)	cgycmoB0731
Cucsa.263980	Lsi01G020780	Bottle gourd (USVL1VR-Ls)	cgylsiB428
Cucsa.263980	Cp4.1LG10g12380	Cucurbita pepo (Zucchini)	cgycpeB0697
Cucsa.263980	MELO3C008908.2	Melon (DHL92) v3.6.1	cgymedB440
Cucsa.263980	CsaV3_4G030470	Cucumber (Chinese Long) v3	cgycucB406
Cucsa.263980	Bhi03G002332	Wax gourd	cgywgoB540

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.263980	Watermelon (Charleston Gray)	cgywcgB463
Cucsa.263980	Watermelon (97103) v1	cgywmB489
Cucsa.263980	Watermelon (97103) v2	cgywmbB464