Cucsa.259480 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.259480
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Translation initiation factor IF-2
Location	scaffold02229 : 5953363 .. 5956210 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCTCTTCCTCTTCTTCTTCTTCCATAGCCCATCTCTCTCTGTTTCCATCAGAAGAATCAGAGGATGGCCATTACTCTCAGCCTTCCAAAACTTCCCCATAAAACTCCCATTTCTTCTTCCAAGCTTCCCATTCCCTCCATTCCAACGAACTTGGTCTTATCTCAAAACCCCAAATGCTCAAACAATTTATTCATTCAGACTGTTCAAAATCTCAAACCTTATACCATTCCCCTCACCGCTCTCACATTGCCTTTCTTCCTTCATCCACAGGTCGGTTTCTATTATCTATCTTATTTGCAGCTTTAGTTTGTGCGATTCTCGAATTCGATTTCATTGGTTTCAGGATGCTCTTGCTGTTGGAGGGGAGTTTGGGATTTTGGAAGGTAGGTCCTTTGCCCTCATTCATCCTCTTGTTATGGGTGGTCTTTTTGTCTACACTCTCTGGGCTGGCTATTTGGGATGGCAATGGCGGCGGGTCAGAACGGTTCAGAATGAAATTAATGAGTTGAAGAAGCAAGTGGCTCCTGCGGCTGTAACCCCAGATGGGAAGCCAGTTGAAGCACCTCCATCTCCCACTGAATTGAAGATTCAGCAGCTCACAGAGGTATGATGACTGTCTTCTTAACCCAATCAAAATCTGAATTATGGGCAAGTCTAAATGGTGTTTGTGACACATATAGGTTTAGGGTCTATCCCAAAAAATTAAAGACAAGATACAAGTGTTTTCCTTGGACATTGAAATTTGAGTTGTAAATTAACATGGTTAGGCGTTGAATATGTAGAATGGATGGGTATACGATTGATTATTGGAGAAGGAATTTGAATAGTTTCTGTTGAAGGGAATTTTTTGGGGGAGTCTAGGGAAGAGCAAAAAAaTTGGAGATTTGGGCAATAGAAAAGGCATAAACCTTCCTGTGTAGATATAAGAGATGTAAATTTAGCATTCCAATAACTAAACTTTTTATTAGCATTCCAAGAAGAAAATGAGTGGGATTGATTAGAGCCATGTCCTAATTACTCTAATGGGCATGGAGAGAAACTACTGATACTAGAACACTGCACCAAGTTAATTTCTATAAAAAaTAGTACAGAGGACCCTCTGTAGCTCAGCTGCTCAATGCTATTTGTATTTGAGTTTTATTCTATTGAGTGAATGAGTCAACTCAAATAAAAGTAAACTCTTCAAGTGGTAAAGATTATGGTTAAACTTTCAACAATCTTAACAAAACTGACATGTGGTTAAGTTCTCTTGGGAATATTGTTGGAAGGAAGACAAGGAGGTGGTCCTTTGTTAGTGATTGTCAAGGCTTTAAGGGTGTGAAAAAGAAAGATCATAGCTATATAAATAAGCCCAGTATCTATATAGGCAAAAAAAAAaaTTGTGGGTGGAATCTAACTCGGAAGAGCTGACTAATTTGATTGGTTCTTTtCTTTTTCTTAGAATGGGACAGATCCCTTTGTCCTGATAATTCTAGAATCAAAATAGAAATAGACAAATCTGTATAGTGAATGCTTGCCGAACATATCTGATGCCATTGGTTTTTGAAGTTCAGGAGAGGAAAGAGTTGATCAAAGGGTCCTTCAGAGATAGGCACTTCAATGCTGGTTCCATATTATTAGGATTCGGAGTTTTGGAAGCGATTGGTGGAGGCGTAAATACCTGGTTTAGAACAGGAAAGCTTTTTCCTGGCCCTCATTTGTTTGCAGGAGCAGGTAAAACAAAAGCTTTTGCATCTGAATGCTTTCTTTTAGAAATTGACCTATCATATGAATGTGATGTCATTGCATTCAGTTCCACTCAGATCCCTCTACTTTGGTACTTTAGTCTGATTTCAACTGTTGATAACATCGCAACCCGAATTCAAAATAAGTTTCGGGCAAACTATGAAATGAGAGGATCTATTTCTATGTCGTTACTGTGATCTGATATGCATTTTGCTTTTATGCTATTGCCTGTGAGCAGGGATTACTGTTCTCTGGGCTCTGGCAGCTGCTCTTGTACCTGCAATGCAGAAGGGAAACGAGACAGCCAGAAACCTTCACATTGCGTTGAATACATTGAATGTTCTACTTTTTATATGGCAGATTCCCACTGGAATTGACATTGTCCTCAAAGTTTTTGAATTCACAAAATGGCCTTGATTTAATGATACTCCTATGTAAACTTCCTTCCCcTTTtCCTTATGGTCTGAGGTCTCTCTCTGTCTTAAGTCTGTACATGTCTGGACCTTTTCTTTCCACTTTCCCATTTTCCAATTCTTGCCTCCTACAATTTTTCTTCCCTTCAGGTATGACTTGTTACCCAAGCACTTGAAGTCTATAAGAATTACGTTTCAATCTATGCATTTTTTAACCATCTCCCGGTATAGCTCTATGTTTCAGTTTGTTCATTTTTAAAGTCTGCAGTCTCACTGGTACAGAGAAATGCTGCAGATTCAAGTACCTTGTACTTCAAACTGACGTGAGACTGTGTTTGTATCTTCATCGCAACTCAAATCAACCACTTGCCCTCTAAACAGCCCAAACTAAATAAGGACCAGCCCCAACCCTGCAGTCAGTTGGCGCAATCAAGCTACCACACAGAAGAAAGTGCTATCTAGGGAACAGAAGCATCTCCTTCTTCCCTCATTTTTATCAACGAACAATGCGTATTCAGATTCAGAAAGAAGTCTGTCCATTAGAGTCACTGTGATTTCTTCCATGTTCACATATTTCAAACGGCAATGATGTTAGCAATAATAGTAACATCCAAAGAGGATGCTTTCCTTTCCCTTGTTTTTCACCCTTTTCTTCATATAGTATTTGTGTATTTGTTATTCAAAGAAGCATTTCAAGTTTTTtCTTT

mRNA sequence

TTTTCTCTTCCTCTTCTTCTTCTTCCATAGCCCATCTCTCTCTGTTTCCATCAGAAGAATCAGAGGATGGCCATTACTCTCAGCCTTCCAAAACTTCCCCATAAAACTCCCATTTCTTCTTCCAAGCTTCCCATTCCCTCCATTCCAACGAACTTGGTCTTATCTCAAAACCCCAAATGCTCAAACAATTTATTCATTCAGACTGTTCAAAATCTCAAACCTTATACCATTCCCCTCACCGCTCTCACATTGCCTTTCTTCCTTCATCCACAGGATGCTCTTGCTGTTGGAGGGGAGTTTGGGATTTTGGAAGGTAGGTCCTTTGCCCTCATTCATCCTCTTGTTATGGGTGGTCTTTTTGTCTACACTCTCTGGGCTGGCTATTTGGGATGGCAATGGCGGCGGGTCAGAACGGTTCAGAATGAAATTAATGAGTTGAAGAAGCAAGTGGCTCCTGCGGCTGTAACCCCAGATGGGAAGCCAGTTGAAGCACCTCCATCTCCCACTGAATTGAAGATTCAGCAGCTCACAGAGGAGAGGAAAGAGTTGATCAAAGGGTCCTTCAGAGATAGGCACTTCAATGCTGGTTCCATATTATTAGGATTCGGAGTTTTGGAAGCGATTGGTGGAGGCGTAAATACCTGGTTTAGAACAGGAAAGCTTTTTCCTGGCCCTCATTTGTTTGCAGGAGCAGGGATTACTGTTCTCTGGGCTCTGGCAGCTGCTCTTGTACCTGCAATGCAGAAGGGAAACGAGACAGCCAGAAACCTTCACATTGCGTTGAATACATTGAATGTTCTACTTTTTATATGGCAGATTCCCACTGGAATTGACATTGTCCTCAAAGTTTTTGAATTCACAAAATGGCCTTGATTTAATGATACTCCTATGTAAACTTCCTTCCCCTTTTCCTTATGGTCTGAGGTCTCTCTCTGTCTTAAGTCTGTACATGTCTGGACCTTTTCTTTCCACTTTCCCATTTTCCAATTCTTGCCTCCTACAATTTTTCTTCCCTTCAGTCTGCAGTCTCACTGGTACAGAGAAATGCTGCAGATTCAAGTACCTTGTACTTCAAACTGACGTGAGACTGTGTTTGTATCTTCATCGCAACTCAAATCAACCACTTGCCCTCTAAACAGCCCAAACTAAATAAGGACCAGCCCCAACCCTGCAGTCAGTTGGCGCAATCAAGCTACCACACAGAAGAAAGTGCTATCTAGGGAACAGAAGCATCTCCTTCTTCCCTCATTTTTATCAACGAACAATGCGTATTCAGATTCAGAAAGAAGTCTGTCCATTAGAGTCACTGTGATTTCTTCCATGTTCACATATTTCAAACGGCAATGATGTTAGCAATAATAGTAACATCCAAAGAGGATGCTTTCCTTTCCCTTGTTTTTCACCCTTTTCTTCATATAGTATTTGTGTATTTGTTATTCAAAGAAGCATTTCAAGTTTTTTCTTT

Coding sequence (CDS)

ATGGCCATTACTCTCAGCCTTCCAAAACTTCCCCATAAAACTCCCATTTCTTCTTCCAAGCTTCCCATTCCCTCCATTCCAACGAACTTGGTCTTATCTCAAAACCCCAAATGCTCAAACAATTTATTCATTCAGACTGTTCAAAATCTCAAACCTTATACCATTCCCCTCACCGCTCTCACATTGCCTTTCTTCCTTCATCCACAGGATGCTCTTGCTGTTGGAGGGGAGTTTGGGATTTTGGAAGGTAGGTCCTTTGCCCTCATTCATCCTCTTGTTATGGGTGGTCTTTTTGTCTACACTCTCTGGGCTGGCTATTTGGGATGGCAATGGCGGCGGGTCAGAACGGTTCAGAATGAAATTAATGAGTTGAAGAAGCAAGTGGCTCCTGCGGCTGTAACCCCAGATGGGAAGCCAGTTGAAGCACCTCCATCTCCCACTGAATTGAAGATTCAGCAGCTCACAGAGGAGAGGAAAGAGTTGATCAAAGGGTCCTTCAGAGATAGGCACTTCAATGCTGGTTCCATATTATTAGGATTCGGAGTTTTGGAAGCGATTGGTGGAGGCGTAAATACCTGGTTTAGAACAGGAAAGCTTTTTCCTGGCCCTCATTTGTTTGCAGGAGCAGGGATTACTGTTCTCTGGGCTCTGGCAGCTGCTCTTGTACCTGCAATGCAGAAGGGAAACGAGACAGCCAGAAACCTTCACATTGCGTTGAATACATTGAATGTTCTACTTTTTATATGGCAGATTCCCACTGGAATTGACATTGTCCTCAAAGTTTTTGAATTCACAAAATGGCCTTGA

Protein sequence

MAITLSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVQNLKPYTIPLTALTLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTVQNEINELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLGFGVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALNTLNVLLFIWQIPTGIDIVLKVFEFTKWP*

Homology

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BLAST of Cucsa.259480 vs. TrEMBL
Match: A0A0A0L3S2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119320 PE=4 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 2.9e-152
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 1


Query: 1   MAITLSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVQNLKPYTIPLTAL 60
           MAITLSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVQNLKPYTIPLTAL
Sbjct: 1   MAITLSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVQNLKPYTIPLTAL 60

Query: 61  TLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTVQNE 120
           TLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTVQNE
Sbjct: 61  TLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTVQNE 120

Query: 121 INELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLGF 180
           INELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLGF
Sbjct: 121 INELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLGF 180

Query: 181 GVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240
           GVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN
Sbjct: 181 GVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240

Query: 241 TLNVLLFIWQIPTGIDIVLKVFEFTKWP 269
           TLNVLLFIWQIPTGIDIVLKVFEFTKWP
Sbjct: 241 TLNVLLFIWQIPTGIDIVLKVFEFTKWP 268

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BLAST of Cucsa.259480 vs. TrEMBL
Match: A0A061DSD9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_005085 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 2.9e-112
Identity = 203/271 (74.91%), Postives = 225/271 (83.03%), Query Frame = 1


Query: 1   MAITLSL---PKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVQNLKPYTIPL 60
           MA TLSL   P LP K      KLP+ S PT  ++S        LF +T+ +LK  ++PL
Sbjct: 1   MAATLSLLKLPFLPQKPHYPQPKLPLLSNPTKKIISNESINPPKLFTETIDSLKSASLPL 60

Query: 61  TALTLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTV 120
           T L LPFFL  +DALAV GEFGILEGRSFAL+HP+VMGGLF YTLWAGYLGWQWRRVRT+
Sbjct: 61  TTLALPFFLDTKDALAVDGEFGILEGRSFALLHPIVMGGLFFYTLWAGYLGWQWRRVRTI 120

Query: 121 QNEINELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIL 180
           QNEINELKKQV P  VTP+GKPVEA PSP ELKIQQLTEERKEL+KGS+RDRH+NAGSIL
Sbjct: 121 QNEINELKKQVKPTPVTPEGKPVEAAPSPVELKIQQLTEERKELLKGSYRDRHYNAGSIL 180

Query: 181 LGFGVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHI 240
           LGFGVLEA+ GGVNTWFRTGKLFPGPHLFAG  ITVLWA AAALVP+MQKG+ETAR+LHI
Sbjct: 181 LGFGVLEAVSGGVNTWFRTGKLFPGPHLFAGTAITVLWAAAAALVPSMQKGSETARSLHI 240

Query: 241 ALNTLNVLLFIWQIPTGIDIVLKVFEFTKWP 269
           ALN +NV LFIWQIPTGI+IV KVFEFTKWP
Sbjct: 241 ALNAVNVTLFIWQIPTGIEIVFKVFEFTKWP 271

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BLAST of Cucsa.259480 vs. TrEMBL
Match: A0A0D2SI22_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G111000 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.5e-111
Identity = 201/271 (74.17%), Postives = 225/271 (83.03%), Query Frame = 1


Query: 1   MAITLSL---PKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVQNLKPYTIPL 60
           MA TLSL   P LP K  +  SKLP+ S PT   +         LF +TV +LK  ++PL
Sbjct: 1   MAATLSLLKSPLLPQKPHLLQSKLPLLSNPTKQFICNESFNPPKLFAETVHHLKSASLPL 60

Query: 61  TALTLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTV 120
           T L  PF    +DALAVGGEFGILEGRSFAL+HP+VMGGLF YTLWAGYLGWQWRRVRT+
Sbjct: 61  TTLAFPFLFDAKDALAVGGEFGILEGRSFALVHPIVMGGLFFYTLWAGYLGWQWRRVRTI 120

Query: 121 QNEINELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIL 180
           QNEINELKKQV P  VTP+GKPVEA PSP EL+IQ+L+EERKEL+KGS+RDRHFNAGSIL
Sbjct: 121 QNEINELKKQVKPTPVTPEGKPVEAAPSPVELEIQKLSEERKELLKGSYRDRHFNAGSIL 180

Query: 181 LGFGVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHI 240
           LGFGVLE++GGGVNTWFRTGKLFPGPHLFAGA ITVLWA AAALVPAMQKG+ETAR+LHI
Sbjct: 181 LGFGVLESVGGGVNTWFRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKGSETARSLHI 240

Query: 241 ALNTLNVLLFIWQIPTGIDIVLKVFEFTKWP 269
           ALN +NV+LFIWQIPTGIDIV KVF+FT WP
Sbjct: 241 ALNAVNVILFIWQIPTGIDIVFKVFQFTNWP 271

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BLAST of Cucsa.259480 vs. TrEMBL
Match: B9T511_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0144260 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 5.6e-111
Identity = 208/272 (76.47%), Postives = 228/272 (83.82%), Query Frame = 1


Query: 1   MAITLSL---PKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVQNL-KPYTIP 60
           MA TL+L   P L  K P   SK P    P+ L LS+  K S+ L  + +  L    ++P
Sbjct: 1   MATTLTLLRSPVLARKLPYIHSKFPSLPKPSKLDLSK--KESSKLLNENIHQLISSASLP 60

Query: 61  LTALTLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRT 120
           +TA +LP FL  +DA AVGGEFGILEG++FALIHP VMG LF YTLWAGYLGWQWRRVRT
Sbjct: 61  ITAFSLPLFLDAKDAFAVGGEFGILEGKTFALIHPAVMGLLFFYTLWAGYLGWQWRRVRT 120

Query: 121 VQNEINELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSI 180
           +QNEI+ELKKQV PAAVTPDGKPVEAPPSP ELKIQQLTEERKELIKGS++DRHFNAGSI
Sbjct: 121 IQNEISELKKQVKPAAVTPDGKPVEAPPSPVELKIQQLTEERKELIKGSYKDRHFNAGSI 180

Query: 181 LLGFGVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLH 240
           LLGFGVLE+IGGG+NTWFRTGKLFPGPHLFAGAGITVLWA AAALVPAMQKGNETARNLH
Sbjct: 181 LLGFGVLESIGGGLNTWFRTGKLFPGPHLFAGAGITVLWAAAAALVPAMQKGNETARNLH 240

Query: 241 IALNTLNVLLFIWQIPTGIDIVLKVFEFTKWP 269
           IALN LNVLLFIWQIPTG +IVLKVFEFTKWP
Sbjct: 241 IALNALNVLLFIWQIPTGFEIVLKVFEFTKWP 270

[Close]

BLAST of Cucsa.259480 vs. TrEMBL
Match: A0A067JX33_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14213 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 3.6e-110
Identity = 205/272 (75.37%), Postives = 222/272 (81.62%), Query Frame = 1


Query: 1   MAITLSLPK---LPHKTPISSSKLPIPSIPTNLVLSQNP-KCSNNLFIQTVQNLKPYTIP 60
           MA TL L K   L  +     SKLP  S P+ L +S         LF +T+QNL   ++P
Sbjct: 1   MATTLGLLKSTVLVRRPLTIQSKLPYLSKPSKLDVSNKRFPVPQKLFSETIQNLCSASLP 60

Query: 61  LTALTLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRT 120
           LTA   P FL  +DALAVGGEFGILEGR+FALIHPLVMGGLF YTLWAGYLGWQWRRVRT
Sbjct: 61  LTAFAFPIFLDTKDALAVGGEFGILEGRTFALIHPLVMGGLFFYTLWAGYLGWQWRRVRT 120

Query: 121 VQNEINELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSI 180
           +QNEINELKKQV P  VTP+G PVEA PSP +LK+QQLTEERKELIKGSF+DRHFNAGSI
Sbjct: 121 IQNEINELKKQVKPTPVTPEGTPVEAAPSPIDLKVQQLTEERKELIKGSFKDRHFNAGSI 180

Query: 181 LLGFGVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLH 240
           LLGFGV E+I GG NTW RTGKLFPGPHLFAGAGIT+LWA AAALVPAMQKGNETARNLH
Sbjct: 181 LLGFGVFESIAGGFNTWLRTGKLFPGPHLFAGAGITILWAAAAALVPAMQKGNETARNLH 240

Query: 241 IALNTLNVLLFIWQIPTGIDIVLKVFEFTKWP 269
           IALN LNVLLFIWQIPTG+DIVLKVFEFTKWP
Sbjct: 241 IALNALNVLLFIWQIPTGLDIVLKVFEFTKWP 272

[Close]

BLAST of Cucsa.259480 vs. TAIR10
Match: AT3G61870.1 (AT3G61870.1 unknown protein)

HSP 1 Score: 368.2 bits (944), Expect = 4.2e-102
Identity = 183/265 (69.06%), Postives = 213/265 (80.38%), Query Frame = 1


Query: 7   LPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVQNLKPYTIPLTALTLPFFL 66
           LP+  H   ++S K PI +        + P   N L     Q LK  ++PL  + LPFFL
Sbjct: 14  LPRTHHPKTLNSLK-PITTKSQPCKTPEIPSTPNAL-----QLLKSSSLPLAVIALPFFL 73

Query: 67  HPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTVQNEINELKK 126
            PQDA A GGEFGILEGRSFALIHP+VMGGLF YTLW GYLGWQWRRVRT+Q+EI++LKK
Sbjct: 74  DPQDAAAAGGEFGILEGRSFALIHPIVMGGLFAYTLWTGYLGWQWRRVRTIQSEISDLKK 133

Query: 127 QVAPAAVTPDGKPV---EAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLGFGVL 186
           Q+ P  V+PDG       +PPS TEL+IQ+LTEERKEL+KGS+RD+HF+AGS+LLGFGVL
Sbjct: 134 QLKPTPVSPDGSTAVDSSSPPSTTELQIQRLTEERKELVKGSYRDKHFDAGSVLLGFGVL 193

Query: 187 EAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALNTLN 246
           EA+ GGVNT+ RTGKLFPGPHL+AGAGITVLWA AAALVPAMQKGN+TAR+LHIALN +N
Sbjct: 194 EAVFGGVNTYLRTGKLFPGPHLYAGAGITVLWAAAAALVPAMQKGNDTARSLHIALNAVN 253

Query: 247 VLLFIWQIPTGIDIVLKVFEFTKWP 269
           VLLFIWQIPTG+DIVLKVFEFTKWP
Sbjct: 254 VLLFIWQIPTGLDIVLKVFEFTKWP 272

[Close]

BLAST of Cucsa.259480 vs. NCBI nr
Match: gi|449432022|ref|XP_004133799.1| (PREDICTED: uncharacterized protein LOC101206421 [Cucumis sativus])

HSP 1 Score: 545.8 bits (1405), Expect = 4.2e-152
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 1


Query: 1   MAITLSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVQNLKPYTIPLTAL 60
           MAITLSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVQNLKPYTIPLTAL
Sbjct: 1   MAITLSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVQNLKPYTIPLTAL 60

Query: 61  TLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTVQNE 120
           TLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTVQNE
Sbjct: 61  TLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTVQNE 120

Query: 121 INELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLGF 180
           INELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLGF
Sbjct: 121 INELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLGF 180

Query: 181 GVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240
           GVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN
Sbjct: 181 GVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240

Query: 241 TLNVLLFIWQIPTGIDIVLKVFEFTKWP 269
           TLNVLLFIWQIPTGIDIVLKVFEFTKWP
Sbjct: 241 TLNVLLFIWQIPTGIDIVLKVFEFTKWP 268

[Close]

BLAST of Cucsa.259480 vs. NCBI nr
Match: gi|659074892|ref|XP_008437852.1| (PREDICTED: uncharacterized protein LOC103483159 [Cucumis melo])

HSP 1 Score: 539.3 bits (1388), Expect = 3.9e-150
Identity = 263/268 (98.13%), Postives = 265/268 (98.88%), Query Frame = 1


Query: 1   MAITLSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVQNLKPYTIPLTAL 60
           MAITLSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTV NLKPYTIPLTAL
Sbjct: 1   MAITLSLPKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVHNLKPYTIPLTAL 60

Query: 61  TLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTVQNE 120
           TLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRT+QNE
Sbjct: 61  TLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTIQNE 120

Query: 121 INELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLGF 180
           INELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLGF
Sbjct: 121 INELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSILLGF 180

Query: 181 GVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240
           GVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN
Sbjct: 181 GVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHIALN 240

Query: 241 TLNVLLFIWQIPTGIDIVLKVFEFTKWP 269
            LNV+LFIWQIPTGIDIV KVFEFTKWP
Sbjct: 241 ALNVILFIWQIPTGIDIVFKVFEFTKWP 268

[Close]

BLAST of Cucsa.259480 vs. NCBI nr
Match: gi|590720957|ref|XP_007051473.1| (Uncharacterized protein TCM_005085 [Theobroma cacao])

HSP 1 Score: 412.9 bits (1060), Expect = 4.2e-112
Identity = 203/271 (74.91%), Postives = 225/271 (83.03%), Query Frame = 1


Query: 1   MAITLSL---PKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVQNLKPYTIPL 60
           MA TLSL   P LP K      KLP+ S PT  ++S        LF +T+ +LK  ++PL
Sbjct: 1   MAATLSLLKLPFLPQKPHYPQPKLPLLSNPTKKIISNESINPPKLFTETIDSLKSASLPL 60

Query: 61  TALTLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTV 120
           T L LPFFL  +DALAV GEFGILEGRSFAL+HP+VMGGLF YTLWAGYLGWQWRRVRT+
Sbjct: 61  TTLALPFFLDTKDALAVDGEFGILEGRSFALLHPIVMGGLFFYTLWAGYLGWQWRRVRTI 120

Query: 121 QNEINELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIL 180
           QNEINELKKQV P  VTP+GKPVEA PSP ELKIQQLTEERKEL+KGS+RDRH+NAGSIL
Sbjct: 121 QNEINELKKQVKPTPVTPEGKPVEAAPSPVELKIQQLTEERKELLKGSYRDRHYNAGSIL 180

Query: 181 LGFGVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHI 240
           LGFGVLEA+ GGVNTWFRTGKLFPGPHLFAG  ITVLWA AAALVP+MQKG+ETAR+LHI
Sbjct: 181 LGFGVLEAVSGGVNTWFRTGKLFPGPHLFAGTAITVLWAAAAALVPSMQKGSETARSLHI 240

Query: 241 ALNTLNVLLFIWQIPTGIDIVLKVFEFTKWP 269
           ALN +NV LFIWQIPTGI+IV KVFEFTKWP
Sbjct: 241 ALNAVNVTLFIWQIPTGIEIVFKVFEFTKWP 271

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BLAST of Cucsa.259480 vs. NCBI nr
Match: gi|823187337|ref|XP_012490155.1| (PREDICTED: uncharacterized protein LOC105802826 [Gossypium raimondii])

HSP 1 Score: 410.6 bits (1054), Expect = 2.1e-111
Identity = 201/271 (74.17%), Postives = 225/271 (83.03%), Query Frame = 1


Query: 1   MAITLSL---PKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVQNLKPYTIPL 60
           MA TLSL   P LP K  +  SKLP+ S PT   +         LF +TV +LK  ++PL
Sbjct: 1   MAATLSLLKSPLLPQKPHLLQSKLPLLSNPTKQFICNESFNPPKLFAETVHHLKSASLPL 60

Query: 61  TALTLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRTV 120
           T L  PF    +DALAVGGEFGILEGRSFAL+HP+VMGGLF YTLWAGYLGWQWRRVRT+
Sbjct: 61  TTLAFPFLFDAKDALAVGGEFGILEGRSFALVHPIVMGGLFFYTLWAGYLGWQWRRVRTI 120

Query: 121 QNEINELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSIL 180
           QNEINELKKQV P  VTP+GKPVEA PSP EL+IQ+L+EERKEL+KGS+RDRHFNAGSIL
Sbjct: 121 QNEINELKKQVKPTPVTPEGKPVEAAPSPVELEIQKLSEERKELLKGSYRDRHFNAGSIL 180

Query: 181 LGFGVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLHI 240
           LGFGVLE++GGGVNTWFRTGKLFPGPHLFAGA ITVLWA AAALVPAMQKG+ETAR+LHI
Sbjct: 181 LGFGVLESVGGGVNTWFRTGKLFPGPHLFAGAAITVLWAAAAALVPAMQKGSETARSLHI 240

Query: 241 ALNTLNVLLFIWQIPTGIDIVLKVFEFTKWP 269
           ALN +NV+LFIWQIPTGIDIV KVF+FT WP
Sbjct: 241 ALNAVNVILFIWQIPTGIDIVFKVFQFTNWP 271

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BLAST of Cucsa.259480 vs. NCBI nr
Match: gi|255585259|ref|XP_002533330.1| (PREDICTED: uncharacterized protein LOC8273045 [Ricinus communis])

HSP 1 Score: 408.7 bits (1049), Expect = 8.0e-111
Identity = 208/272 (76.47%), Postives = 228/272 (83.82%), Query Frame = 1


Query: 1   MAITLSL---PKLPHKTPISSSKLPIPSIPTNLVLSQNPKCSNNLFIQTVQNL-KPYTIP 60
           MA TL+L   P L  K P   SK P    P+ L LS+  K S+ L  + +  L    ++P
Sbjct: 1   MATTLTLLRSPVLARKLPYIHSKFPSLPKPSKLDLSK--KESSKLLNENIHQLISSASLP 60

Query: 61  LTALTLPFFLHPQDALAVGGEFGILEGRSFALIHPLVMGGLFVYTLWAGYLGWQWRRVRT 120
           +TA +LP FL  +DA AVGGEFGILEG++FALIHP VMG LF YTLWAGYLGWQWRRVRT
Sbjct: 61  ITAFSLPLFLDAKDAFAVGGEFGILEGKTFALIHPAVMGLLFFYTLWAGYLGWQWRRVRT 120

Query: 121 VQNEINELKKQVAPAAVTPDGKPVEAPPSPTELKIQQLTEERKELIKGSFRDRHFNAGSI 180
           +QNEI+ELKKQV PAAVTPDGKPVEAPPSP ELKIQQLTEERKELIKGS++DRHFNAGSI
Sbjct: 121 IQNEISELKKQVKPAAVTPDGKPVEAPPSPVELKIQQLTEERKELIKGSYKDRHFNAGSI 180

Query: 181 LLGFGVLEAIGGGVNTWFRTGKLFPGPHLFAGAGITVLWALAAALVPAMQKGNETARNLH 240
           LLGFGVLE+IGGG+NTWFRTGKLFPGPHLFAGAGITVLWA AAALVPAMQKGNETARNLH
Sbjct: 181 LLGFGVLESIGGGLNTWFRTGKLFPGPHLFAGAGITVLWAAAAALVPAMQKGNETARNLH 240

Query: 241 IALNTLNVLLFIWQIPTGIDIVLKVFEFTKWP 269
           IALN LNVLLFIWQIPTG +IVLKVFEFTKWP
Sbjct: 241 IALNALNVLLFIWQIPTGFEIVLKVFEFTKWP 270

The following BLAST results are available for this feature:

BLAST of Cucsa.259480 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3S2_CUCSA	2.9e-152	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119320 PE=4 SV=1	[more]
A0A061DSD9_THECC	2.9e-112	74.91	Uncharacterized protein OS=Theobroma cacao GN=TCM_005085 PE=4 SV=1	[more]
A0A0D2SI22_GOSRA	1.5e-111	74.17	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G111000 PE=4 SV=1	[more]
B9T511_RICCO	5.6e-111	76.47	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0144260 PE=4 SV=1	[more]
A0A067JX33_JATCU	3.6e-110	75.37	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14213 PE=4 SV=1	[more]

BLAST of Cucsa.259480 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61870.1	4.2e-102	69.06	unknown protein	[more]

BLAST of Cucsa.259480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449432022\|ref\|XP_004133799.1\|	4.2e-152	100.00	PREDICTED: uncharacterized protein LOC101206421 [Cucumis sativus]	[more]
gi\|659074892\|ref\|XP_008437852.1\|	3.9e-150	98.13	PREDICTED: uncharacterized protein LOC103483159 [Cucumis melo]	[more]
gi\|590720957\|ref\|XP_007051473.1\|	4.2e-112	74.91	Uncharacterized protein TCM_005085 [Theobroma cacao]	[more]
gi\|823187337\|ref\|XP_012490155.1\|	2.1e-111	74.17	PREDICTED: uncharacterized protein LOC105802826 [Gossypium raimondii]	[more]
gi\|255585259\|ref\|XP_002533330.1\|	8.0e-111	76.47	PREDICTED: uncharacterized protein LOC8273045 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025067	DUF4079
IPR025067	DUF4079
IPR025067	DUF4079

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044249	cellular biosynthetic process
biological_process	GO:0044085	cellular component biogenesis
biological_process	GO:0051186	cofactor metabolic process
biological_process	GO:0019682	glyceraldehyde-3-phosphate metabolic process
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:1901576	organic substance biosynthetic process
biological_process	GO:1901564	organonitrogen compound metabolic process
biological_process	GO:0009657	plastid organization
biological_process	GO:0044711	single-organism biosynthetic process
biological_process	GO:0044281	small molecule metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.259480.1	Cucsa.259480.1	mRNA
Cucsa.259480.2	Cucsa.259480.2	mRNA
Cucsa.259480.3	Cucsa.259480.3	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025067	Protein of unknown function DUF4079	PFAM	PF13301	DUF4079	coord: 87..261 score: 4.5
None	No IPR available	PANTHER	PTHR34679	FAMILY NOT NAMED	coord: 2..268 score: 1.2E
None	No IPR available	PANTHER	PTHR34679:SF2	SUBFAMILY NOT NAMED	coord: 2..268 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.259480	Cla021129	Watermelon (97103) v1	cgywmB479
Cucsa.259480	Csa3G119320	Cucumber (Chinese Long) v2	cgycuB366
Cucsa.259480	MELO3C005999	Melon (DHL92) v3.5.1	cgymeB439
Cucsa.259480	ClCG05G000610	Watermelon (Charleston Gray)	cgywcgB451
Cucsa.259480	CSPI03G07700	Wild cucumber (PI 183967)	cgycpiB383
Cucsa.259480	CmaCh14G021280	Cucurbita maxima (Rimu)	cgycmaB0709
Cucsa.259480	CmoCh14G021900	Cucurbita moschata (Rifu)	cgycmoB0700
Cucsa.259480	Lsi05G021550	Bottle gourd (USVL1VR-Ls)	cgylsiB415
Cucsa.259480	Cp4.1LG03g15980	Cucurbita pepo (Zucchini)	cgycpeB0682
Cucsa.259480	MELO3C005999.2	Melon (DHL92) v3.6.1	cgymedB432
Cucsa.259480	CsaV3_3G007830	Cucumber (Chinese Long) v3	cgycucB387
Cucsa.259480	Cla97C05G080670	Watermelon (97103) v2	cgywmbB452
Cucsa.259480	Bhi01G000382	Wax gourd	cgywgoB514
Cucsa.259480	Carg25712	Silver-seed gourd	carcgyB0148

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.259480	Cucurbita maxima (Rimu)	cgycmaB0725
Cucsa.259480	Cucurbita maxima (Rimu)	cgycmaB0728
Cucsa.259480	Cucurbita moschata (Rifu)	cgycmoB0703
Cucsa.259480	Cucurbita moschata (Rifu)	cgycmoB0712
Cucsa.259480	Cucurbita moschata (Rifu)	cgycmoB0718
Cucsa.259480	Wild cucumber (PI 183967)	cgycpiB387
Cucsa.259480	Cucumber (Chinese Long) v2	cgycuB369
Cucsa.259480	Melon (DHL92) v3.5.1	cgymeB426
Cucsa.259480	Watermelon (Charleston Gray)	cgywcgB446
Cucsa.259480	Watermelon (97103) v1	cgywmB481
Cucsa.259480	Cucurbita pepo (Zucchini)	cgycpeB0685
Cucsa.259480	Cucurbita pepo (Zucchini)	cgycpeB0687
Cucsa.259480	Bottle gourd (USVL1VR-Ls)	cgylsiB413
Cucsa.259480	Melon (DHL92) v3.6.1	cgymedB420
Cucsa.259480	Silver-seed gourd	carcgyB1110
Cucsa.259480	Cucumber (Chinese Long) v3	cgycucB393
Cucsa.259480	Watermelon (97103) v2	cgywmbB445
Cucsa.259480	Wax gourd	cgywgoB507
Cucsa.259480	Cucumber (Gy14) v1	cgycgyB116