Cucsa.259120 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAACAAAGACCCCTCAAGCTAAGCCTTGTCATCCCCTCCATTCAATCATATCCCCCACCAAAAAAAAACCAGCCAAATTTAGCCTAAACCCTTTCTTGTTATGGTTGTTGAAGCTCTTTATTCAATTTTCTGAGCTTCAGAAAGTTGCCATGGAGGCCCTCAATGCAGCAAGTTTAAGCCCCTTGGCTGTTCTTTCCGACAGAAAAAGAGAACCCAAAAAAATCTTCCCAATCCCATCTTCTTCCTCCTTCAAGCTCCCAAATTTTGGTAGTTTAAACACAAATTTATCAGTCCCACAAGGGTTTTGTTTATCAAAAAGCTTACAAGGAAGTTTACTGTTGTTATCTTCAGTATTCAATGCCGGGGTTTCTGGAGCTCTTACTTATGAGGAGGCTCTCCAACAATCTATGACCACTTCTTCATCTGGGGATTTAGATTTAAATGGGATTCTTGATGGGATTGTAAATTTTGGAACAGAGAATCCTGGAATTGTTGTTGGCGGTGTTTCCATTTTGGCTCTCCCTTTGATTTTCTCTCTTTTTCAAGGAAAACCTAAGCCATGGGGTGTTGAATCTGCTAAAAGTGCTTATGCTAAATTGGGTGAGGATTCTAATGCTCAGCTACTTGATATTAGATCGCCAATTGAAATAAGGAAAGTTGGTGCTCCTGATCTCAAGGGTTTGGGTAAAAAACCTGTGTCCATTACTTACAAAGGTGAAGATAAGCCTGGTTTCTTAAAGAAGCTTGGTTTGAAGTTCAAGGAGCCACAAAATACCACATTGTTCATTTTAGACAAGTAAGACTTTGCATTTGTTAACTTAGTTTAGATTTTAGAGCCTTGTTTTGTGATTTGTTAGAGTTTACTATTTAAACTGCCAATAATGTACTGTCTTGTGATGGGTGTTAACTGAAAAAACAATGACAGGTCTAATAGATTCCATCAAGCTATATCACTAATTTGAAGATAAGAAATGTTCTTTTATTTCACACGGATCAATTAAACAGATAGCGAAATATGTCATTTGGTTAGCGAAAACAAGAAGTATGTCAATGAACTACTTGTACTAAATGTAAGCATCTTTTGTGATTTATATATGATTGAAACCAAGTGGTAGTCTAGAATCATAGTTACTCTGCAAGCTAAGGTATGAAAATGATCTGTCTAAATCTTGTTGGAAGACAGATATGATGGGAGCTCTGAACTCGTTGCAGAGTTGGTAACTGTGAATGGATTCAAAGCTGCTTTTGCTATTAAAGATGGCGCAGAAGGACCTCGTGGATGGACGGTTATCACCATTCTTCTTAGTCTTCATGTTTTCATTCAAGGAAATGTTTCAGTATATTTTAGGAGGTTCTCACTTGGATCTATGTCTTGTGCAGAATAGTGGACTTCCATGGTTAACACCGAAGCCAGGTTTGAGTCTTAGCAGTCTAACAGATGCCATTGCTGGTGCATTCGGTGTATGCATTTCTATTTCAATTTATCTACTTGCTCCTTTTTCCTTTGCATAACAATGCTTAAGTTTATAGGAAACAATAAGATTCTATTATGTTGAATCTCTCATGACTCTAAACAGCACATTTAGGTGGAAAAATGTATGTACACATAGAAGCAGCCATGATTCTGAAACTATCATATTGCATTGTCTAGATTACAATGAAAAACACAATTGTTGTAGTAAATATATTCCCTATCTAGATAATATTTTCATCTTCCTTGCTCAAAATTGATCTAAAAAGAATGAAATGAACAAATTTTTTATTGAAATTTATGTGTAGGAGGATTCTGAAGGTCTGCCTGCTGTTGCTACTGCTGTTGCTGCAGCAGCTACTGGATTAGGTTTATTGGCTTTTACTGAGGTTAGCCCATATCTTTTGCCTATGAAATTTCAACGAGAGAATCAATAATAATAAGCCTCAGATTACTTCTTTTGACAGATGGAAACGGTTCTCCAACTTCTGGGTTCAGCTGCAATCATTCAGTTTGTGAGCAGGAAACTCCTATATGCCGAGGTGAATTGAATGTTTGTATTCTAATGCTGTTTTCACCACTAAGATGCGTTTGAAAGAGGGTGTCAATCATTTTCATAAAAAAACAAGAACTGGTCATTTGGCGGTCAAAATTTTCCAAGATAGTGCATCCTAGGGTTGTTAATCATTAAAATTACACGTTGAACGCATAATTCAAGATGACACATCACAGGATTAATGTTATAGTGTGATGGCTATGTAGCCTATTCATTTTTTGCGATCATCTACTTTATATTGTCTACTTCTCGTGGGACGTTGTTCTTTTATTCAGACGATAATTCATCGTCTTATAACCTCACTGCCATTTCATTATGTGACATTGGAATTGGTTACTGAAGTATACTTGACCACAATATCCCTTGAAAATAGGATCGGAAGAAAACATTACAAGAAGTTGATGAGTTCTTAAATACAAAGGTGGCCCCACAAGATCTTGTTGATGAGTTGAAGGTGCTTGAAACTTAAGTTCATTACTTCAATCTACATACTTCTAAATTTCAATATTGCTGCTACAGTTACAATCTCACAATCTCGTCTGTTTTCCAATCAAACCATGTATCAATGTCAGGACATTGGAAAGGCTATATTACCATTACCTGCAACAGAGAAGGCGCTACCTGCACCAGCAGAGGCAGCTGTGGAGGCTGCAACGTCCAGTGACACCGTACAGAAAGCAGAAGCTGTTGTGGAGCCTGCTCTCGAGACAAATTCGGTTGCTAAACAAGAAGTAAAGGCAGAATCACTGCCCAAAATCTCAAGGCCGCTTTCTCCATATCCTTCTGTAATTCTCGCATCCATGAGTATTTCTTTTCTTTGCATTTTTCTTCCCTAGCTTCTAGTTGTAGATTGCATCTCATAAAAGCGAAGAAACTTGTCAACTGCCAGGAAGAGCTTGGTTCATATAGCCATGTACATAAAGTGCTTCCAAAAGGACAACATTTAGGGAGCGTTTAGGACAAGGAATGGAGTTATGAACTTCTAAAACCGACGATCTATAGAGTTAATAAGACATAAAATCGATGTTTAAGTCTTAGGCCCACGAACTCCTTGACCAAACAAGTAGTGGAATACACAACTCTACTCTCCCCAACTCCTTGGTCAAACACCCCCTTATAGTTCCACCTTTAGCACTTGCCATTACTCCGAAAACCAAAAATACAAATACGAGACACAAATATGACATGACACCGACATGGAGACAAGTCTAACTTTTTAAAATTTAGGACACAAACACAACAAGGACACATTTATTAAAATATACATTTTTCTAAAAAAATATATACCATTTTTAAACAGGGAAACTCAAAGTCAATGAGTTTCTTTATTTCTATGCTTGAATGTATTTTGCTTTCAAATTTTATTATTTTTGTCATCTATATATTGACTTAGTATGTGTAAGAATGTTTAATGCATATCAGCCCTATTTTGACAACTAGTCTTCAACACATTTATTACACTAATAAGTGTCGGATACAGACACTCGCCAAACTAAAGTTTATGAGCTTCTTAGGCAGCACCTCAAGCCATGTTGTCTGTCAATGACATTCATGATACATATATATAGAACCTCTAAATCTCCATGTTTTTATCTCTGGTTGCAGTATCCAGATTTCAGGCCTCCGACGTCTCCTACACCGTCGCAGCCGTAATTCCATAGTAATTTAGCTGGGAATTGCAGAGTCTATATTAGTGGGTAATGGTTGAGCTCCATATTTTTTAGTGTTGAAAGAAGGTGTAGATGACGGACTGAGTCAGTGCTCTTATTATAGTCTTCCTCGAAGAGTATGCTGCTTTGCTTTTCCTATTACAAGTCAATGAAATTGTAGTGTTATTTGGTGAGTGTCTCTCAACTTTGACCTCAAACTTTTGTAATGGAGAATGGATCTTCCCAATCAAAAGCCAAAAACTCATACACTTTCACCTTCACTAAATAAACCAAAATAGGGAACAAGTAAGTGTATGAATGAATCACTAGGAATTGATAGTTTTGTACCT CAAACAAAGACCCCTCAAGCTAAGCCTTGTCATCCCCTCCATTCAATCATATCCCCCACCAAAAAAAAACCAGCCAAATTTAGCCTAAACCCTTTCTTGTTATGGTTGTTGAAGCTCTTTATTCAATTTTCTGAGCTTCAGAAAGTTGCCATGGAGGCCCTCAATGCAGCAAGTTTAAGCCCCTTGGCTGTTCTTTCCGACAGAAAAAGAGAACCCAAAAAAATCTTCCCAATCCCATCTTCTTCCTCCTTCAAGCTCCCAAATTTTGGTAGTTTAAACACAAATTTATCAGTCCCACAAGGGTTTTGTTTATCAAAAAGCTTACAAGGAAGTTTACTGTTGTTATCTTCAGTATTCAATGCCGGGGTTTCTGGAGCTCTTACTTATGAGGAGGCTCTCCAACAATCTATGACCACTTCTTCATCTGGGGATTTAGATTTAAATGGGATTCTTGATGGGATTGTAAATTTTGGAACAGAGAATCCTGGAATTGTTGTTGGCGGTGTTTCCATTTTGGCTCTCCCTTTGATTTTCTCTCTTTTTCAAGGAAAACCTAAGCCATGGGGTGTTGAATCTGCTAAAAGTGCTTATGCTAAATTGGGTGAGGATTCTAATGCTCAGCTACTTGATATTAGATCGCCAATTGAAATAAGGAAAGTTGGTGCTCCTGATCTCAAGGGTTTGGGTAAAAAACCTGTGTCCATTACTTACAAAGGTGAAGATAAGCCTGGTTTCTTAAAGAAGCTTGGTTTGAAGTTCAAGGAGCCACAAAATACCACATTGTTCATTTTAGACAAATATGATGGGAGCTCTGAACTCGTTGCAGAGTTGGTAACTGTGAATGGATTCAAAGCTGCTTTTGCTATTAAAGATGGCGCAGAAGGACCTCGTGGATGGACGAATAGTGGACTTCCATGGTTAACACCGAAGCCAGGTTTGAGTCTTAGCAGTCTAACAGATGCCATTGCTGGTGCATTCGGTGAGGATTCTGAAGGTCTGCCTGCTGTTGCTACTGCTGTTGCTGCAGCAGCTACTGGATTAGGTTTATTGGCTTTTACTGAGATGGAAACGGTTCTCCAACTTCTGGGTTCAGCTGCAATCATTCAGTTTGTGAGCAGGAAACTCCTATATGCCGAGGATCGGAAGAAAACATTACAAGAAGTTGATGAGTTCTTAAATACAAAGGTGGCCCCACAAGATCTTGTTGATGAGTTGAAGGACATTGGAAAGGCTATATTACCATTACCTGCAACAGAGAAGGCGCTACCTGCACCAGCAGAGGCAGCTGTGGAGGCTGCAACGTCCAGTGACACCGTACAGAAAGCAGAAGCTGTTGTGGAGCCTGCTCTCGAGACAAATTCGGTTGCTAAACAAGAAGTAAAGGCAGAATCACTGCCCAAAATCTCAAGGCCGCTTTCTCCATATCCTTCTTATCCAGATTTCAGGCCTCCGACGTCTCCTACACCGTCGCAGCCGTAATTCCATAGTAATTTAGCTGGGAATTGCAGAGTCTATATTAGTGGGTAATGGTTGAGCTCCATATTTTTTAGTGTTGAAAGAAGGTGTAGATGACGGACTGAGTCAGTGCTCTTATTATAGTCTTCCTCGAAGAGTATGCTGCTTTGCTTTTCCTATTACAAGTCAATGAAATTGTAGTGTTATTTGGTGAGTGTCTCTCAACTTTGACCTCAAACTTTTGTAATGGAGAATGGATCTTCCCAATCAAAAGCCAAAAACTCATACACTTTCACCTTCACTAAATAAACCAAAATAGGGAACAAGTAAGTGTATGAATGAATCACTAGGAATTGATAGTTTTGTACCT ATGGAGGCCCTCAATGCAGCAAGTTTAAGCCCCTTGGCTGTTCTTTCCGACAGAAAAAGAGAACCCAAAAAAATCTTCCCAATCCCATCTTCTTCCTCCTTCAAGCTCCCAAATTTTGGTAGTTTAAACACAAATTTATCAGTCCCACAAGGGTTTTGTTTATCAAAAAGCTTACAAGGAAGTTTACTGTTGTTATCTTCAGTATTCAATGCCGGGGTTTCTGGAGCTCTTACTTATGAGGAGGCTCTCCAACAATCTATGACCACTTCTTCATCTGGGGATTTAGATTTAAATGGGATTCTTGATGGGATTGTAAATTTTGGAACAGAGAATCCTGGAATTGTTGTTGGCGGTGTTTCCATTTTGGCTCTCCCTTTGATTTTCTCTCTTTTTCAAGGAAAACCTAAGCCATGGGGTGTTGAATCTGCTAAAAGTGCTTATGCTAAATTGGGTGAGGATTCTAATGCTCAGCTACTTGATATTAGATCGCCAATTGAAATAAGGAAAGTTGGTGCTCCTGATCTCAAGGGTTTGGGTAAAAAACCTGTGTCCATTACTTACAAAGGTGAAGATAAGCCTGGTTTCTTAAAGAAGCTTGGTTTGAAGTTCAAGGAGCCACAAAATACCACATTGTTCATTTTAGACAAATATGATGGGAGCTCTGAACTCGTTGCAGAGTTGGTAACTGTGAATGGATTCAAAGCTGCTTTTGCTATTAAAGATGGCGCAGAAGGACCTCGTGGATGGACGAATAGTGGACTTCCATGGTTAACACCGAAGCCAGGTTTGAGTCTTAGCAGTCTAACAGATGCCATTGCTGGTGCATTCGGTGAGGATTCTGAAGGTCTGCCTGCTGTTGCTACTGCTGTTGCTGCAGCAGCTACTGGATTAGGTTTATTGGCTTTTACTGAGATGGAAACGGTTCTCCAACTTCTGGGTTCAGCTGCAATCATTCAGTTTGTGAGCAGGAAACTCCTATATGCCGAGGATCGGAAGAAAACATTACAAGAAGTTGATGAGTTCTTAAATACAAAGGTGGCCCCACAAGATCTTGTTGATGAGTTGAAGGACATTGGAAAGGCTATATTACCATTACCTGCAACAGAGAAGGCGCTACCTGCACCAGCAGAGGCAGCTGTGGAGGCTGCAACGTCCAGTGACACCGTACAGAAAGCAGAAGCTGTTGTGGAGCCTGCTCTCGAGACAAATTCGGTTGCTAAACAAGAAGTAAAGGCAGAATCACTGCCCAAAATCTCAAGGCCGCTTTCTCCATATCCTTCTTATCCAGATTTCAGGCCTCCGACGTCTCCTACACCGTCGCAGCCGTAA MEALNAASLSPLAVLSDRKREPKKIFPIPSSSSFKLPNFGSLNTNLSVPQGFCLSKSLQGSLLLLSSVFNAGVSGALTYEEALQQSMTTSSSGDLDLNGILDGIVNFGTENPGIVVGGVSILALPLIFSLFQGKPKPWGVESAKSAYAKLGEDSNAQLLDIRSPIEIRKVGAPDLKGLGKKPVSITYKGEDKPGFLKKLGLKFKEPQNTTLFILDKYDGSSELVAELVTVNGFKAAFAIKDGAEGPRGWTNSGLPWLTPKPGLSLSSLTDAIAGAFGEDSEGLPAVATAVAAAATGLGLLAFTEMETVLQLLGSAAIIQFVSRKLLYAEDRKKTLQEVDEFLNTKVAPQDLVDELKDIGKAILPLPATEKALPAPAEAAVEAATSSDTVQKAEAVVEPALETNSVAKQEVKAESLPKISRPLSPYPSYPDFRPPTSPTPSQP*
BLAST of Cucsa.259120 vs. Swiss-Prot
Match: STR4_ARATH (Rhodanese-like domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana GN=STR4 PE=1 SV=2) HSP 1 Score: 471.1 bits (1211), Expect = 1.4e-131 Identity = 266/479 (55.53%), Postives = 332/479 (69.31%), Query Frame = 1
BLAST of Cucsa.259120 vs. Swiss-Prot
Match: STR4A_ARATH (Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana GN=STR4A PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 3.0e-22 Identity = 65/179 (36.31%), Postives = 98/179 (54.75%), Query Frame = 1
BLAST of Cucsa.259120 vs. TrEMBL
Match: A0A0A0L8L6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119690 PE=4 SV=1) HSP 1 Score: 855.9 bits (2210), Expect = 2.2e-245 Identity = 442/442 (100.00%), Postives = 442/442 (100.00%), Query Frame = 1
BLAST of Cucsa.259120 vs. TrEMBL
Match: A0A059C001_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00068 PE=4 SV=1) HSP 1 Score: 547.7 bits (1410), Expect = 1.3e-152 Identity = 286/459 (62.31%), Postives = 363/459 (79.08%), Query Frame = 1
BLAST of Cucsa.259120 vs. TrEMBL
Match: A0A067H338_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013011mg PE=4 SV=1) HSP 1 Score: 546.6 bits (1407), Expect = 2.8e-152 Identity = 280/449 (62.36%), Postives = 353/449 (78.62%), Query Frame = 1
BLAST of Cucsa.259120 vs. TrEMBL
Match: B9I8W2_POPTR (Hydroxyproline-rich glycoprotein OS=Populus trichocarpa GN=POPTR_0014s09220g PE=4 SV=1) HSP 1 Score: 546.6 bits (1407), Expect = 2.8e-152 Identity = 283/444 (63.74%), Postives = 347/444 (78.15%), Query Frame = 1
BLAST of Cucsa.259120 vs. TrEMBL
Match: V4VXJ3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020161mg PE=4 SV=1) HSP 1 Score: 546.6 bits (1407), Expect = 2.8e-152 Identity = 280/449 (62.36%), Postives = 353/449 (78.62%), Query Frame = 1
BLAST of Cucsa.259120 vs. TAIR10
Match: AT4G01050.1 (AT4G01050.1 thylakoid rhodanese-like) HSP 1 Score: 471.1 bits (1211), Expect = 7.6e-133 Identity = 266/479 (55.53%), Postives = 332/479 (69.31%), Query Frame = 1
BLAST of Cucsa.259120 vs. TAIR10
Match: AT3G25480.1 (AT3G25480.1 Rhodanese/Cell cycle control phosphatase superfamily protein) HSP 1 Score: 107.8 bits (268), Expect = 1.7e-23 Identity = 65/179 (36.31%), Postives = 98/179 (54.75%), Query Frame = 1
BLAST of Cucsa.259120 vs. NCBI nr
Match: gi|778676944|ref|XP_011650694.1| (PREDICTED: rhodanese-like domain-containing protein 4, chloroplastic [Cucumis sativus]) HSP 1 Score: 855.9 bits (2210), Expect = 3.1e-245 Identity = 442/442 (100.00%), Postives = 442/442 (100.00%), Query Frame = 1
BLAST of Cucsa.259120 vs. NCBI nr
Match: gi|659075003|ref|XP_008437912.1| (PREDICTED: rhodanese-like domain-containing protein 4, chloroplastic [Cucumis melo]) HSP 1 Score: 830.9 bits (2145), Expect = 1.1e-237 Identity = 428/442 (96.83%), Postives = 432/442 (97.74%), Query Frame = 1
BLAST of Cucsa.259120 vs. NCBI nr
Match: gi|1009142510|ref|XP_015888760.1| (PREDICTED: rhodanese-like domain-containing protein 4, chloroplastic [Ziziphus jujuba]) HSP 1 Score: 558.1 bits (1437), Expect = 1.3e-155 Identity = 290/447 (64.88%), Postives = 353/447 (78.97%), Query Frame = 1
BLAST of Cucsa.259120 vs. NCBI nr
Match: gi|645254795|ref|XP_008233203.1| (PREDICTED: rhodanese-like domain-containing protein 4, chloroplastic [Prunus mume]) HSP 1 Score: 557.4 bits (1435), Expect = 2.3e-155 Identity = 293/452 (64.82%), Postives = 351/452 (77.65%), Query Frame = 1
BLAST of Cucsa.259120 vs. NCBI nr
Match: gi|720033571|ref|XP_010266472.1| (PREDICTED: rhodanese-like domain-containing protein 4, chloroplastic [Nelumbo nucifera]) HSP 1 Score: 552.4 bits (1422), Expect = 7.4e-154 Identity = 290/460 (63.04%), Postives = 355/460 (77.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |