Cucsa.258830 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.258830
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionChitinase
Locationscaffold02229 : 5599734 .. 5600742 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCATCCTTTAAATTCTCCATTCATCTTCTAACTTTCCTCTGTTTCTCACTCATCGCCGGCTCAACCGCCAACCCCCGCCGTAGTTTCGAGCTCGGAGTTTATTCCATAAAAAACGGCCTTATCGACGCCTGCAACTCTGGCAATTACCAAATCATCAACATAGTATTCACCGTTTCACTTGGCAACGCCCAAACCCCAGAAATTAATGTAATCGATTACTGTACTTCAACCGGCGTCGATGGCTGCACTAAATTCAGCCAAGAAATCAAGTCTTGTCAAGCCTTAGGCATCAAAATCATGCTCTCCATCGGCGGGGGGGTCGGTAAATACAATCTGAATAATTTTACCGAGGCCACGAACTTCTCCACATACCTATGGAACAATTTCCTCGGCGGCCAATCAAACTCACGTCCGTTAAACGACGTGGTATTCGACGGCGTCGACATTACCAACGAGAGAAGCTCTTGGGACAATTGGAGCAAACTCGGCGAAGAGTTGAGGAAATTATACGAAAAACAGCGGAAAAAATTTTACTTATCCGCCGCTCCACAGTGTTCATCTCTGGATTCGAGCTCTCATTCGATTCCACAGCCTGGGATTTTCGATTACATTTCAGTTCAATTCTTCGGTAACAACCTCGTTTGCCAGTACCTCAATGGCCGACTTGAGGGGTTTTGGAAATTTTGGAATTCGTGGAAGATGTTTAATGCAGACAAGGTGTTTGTGAAATTGCTAGCGGGTCCAATGGCGGAAGATATGGGATACATTCGGCCTGATGTGTTCAGAACTGAAGTATTGCCGGAGCTTCAACAGAGTTCGAAATTTGGCGGCGTGATTTTGTGGTCGGAGGATCTTGATAGAGGATATAGTTCAGAGATCAACCCAAAAGCATGTGGATCAGTTGAGGCAGCGTCGGAATCGGCAAATGAAGTAGCGGAGTTTCCGATGGGTAACAATTACGCTGGTCAACGAGGGTTTAGAAGCTGTAGAGGATCTTGCGTGCTCTAA

mRNA sequence

GGCATCCTTTAAATTCTCCATTCATCTTCTAACTTTCCTCTGTTTCTCACTCATCGCCGGCTCAACCGCCAACCCCCGCCGTAGTTTCGAGCTCGGAGTTTATTCCATAAAAAACGGCCTTATCGACGCCTGCAACTCTGGCAATTACCAAATCATCAACATAGTATTCACCGTTTCACTTGGCAACGCCCAAACCCCAGAAATTAATGTAATCGATTACTGTACTTCAACCGGCGTCGATGGCTGCACTAAATTCAGCCAAGAAATCAAGTCTTGTCAAGCCTTAGGCATCAAAATCATGCTCTCCATCGGCGGGGGGGTCGGTAAATACAATCTGAATAATTTTACCGAGGCCACGAACTTCTCCACATACCTATGGAACAATTTCCTCGGCGGCCAATCAAACTCACGTCCGTTAAACGACGTGGTATTCGACGGCGTCGACATTACCAACGAGAGAAGCTCTTGGGACAATTGGAGCAAACTCGGCGAAGAGTTGAGGAAATTATACGAAAAACAGCGGAAAAAATTTTACTTATCCGCCGCTCCACAGTGTTCATCTCTGGATTCGAGCTCTCATTCGATTCCACAGCCTGGGATTTTCGATTACATTTCAGTTCAATTCTTCGGTAACAACCTCGTTTGCCAGTACCTCAATGGCCGACTTGAGGGGTTTTGGAAATTTTGGAATTCGTGGAAGATGTTTAATGCAGACAAGGTGTTTGTGAAATTGCTAGCGGGTCCAATGGCGGAAGATATGGGATACATTCGGCCTGATGTGTTCAGAACTGAAGTATTGCCGGAGCTTCAACAGAGTTCGAAATTTGGCGGCGTGATTTTGTGGTCGGAGGATCTTGATAGAGGATATAGTTCAGAGATCAACCCAAAAGCATGTGGATCAGTTGAGGCAGCGTCGGAATCGGCAAATGAAGTAGCGGAGTTTCCGATGGGTAACAATTACGCTGGTCAACGAGGGTTTAGAAGCTGTAGAGGATCTTGCGTGCTCTAA

Coding sequence (CDS)

ATGCTCTCCATCGGCGGGGGGGTCGGTAAATACAATCTGAATAATTTTACCGAGGCCACGAACTTCTCCACATACCTATGGAACAATTTCCTCGGCGGCCAATCAAACTCACGTCCGTTAAACGACGTGGTATTCGACGGCGTCGACATTACCAACGAGAGAAGCTCTTGGGACAATTGGAGCAAACTCGGCGAAGAGTTGAGGAAATTATACGAAAAACAGCGGAAAAAATTTTACTTATCCGCCGCTCCACAGTGTTCATCTCTGGATTCGAGCTCTCATTCGATTCCACAGCCTGGGATTTTCGATTACATTTCAGTTCAATTCTTCGGTAACAACCTCGTTTGCCAGTACCTCAATGGCCGACTTGAGGGGTTTTGGAAATTTTGGAATTCGTGGAAGATGTTTAATGCAGACAAGGTGTTTGTGAAATTGCTAGCGGGTCCAATGGCGGAAGATATGGGATACATTCGGCCTGATGTGTTCAGAACTGAAGTATTGCCGGAGCTTCAACAGAGTTCGAAATTTGGCGGCGTGATTTTGTGGTCGGAGGATCTTGATAGAGGATATAGTTCAGAGATCAACCCAAAAGCATGTGGATCAGTTGAGGCAGCGTCGGAATCGGCAAATGAAGTAGCGGAGTTTCCGATGGGTAACAATTACGCTGGTCAACGAGGGTTTAGAAGCTGTAGAGGATCTTGCGTGCTCTAA

Protein sequence

MLSIGGGVGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNWSKLGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLVCQYLNGRLEGFWKFWNSWKMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSKFGGVILWSEDLDRGYSSEINPKACGSVEAASESANEVAEFPMGNNYAGQRGFRSCRGSCVL*
Homology
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BLAST of Cucsa.258830 vs. Swiss-Prot
Match: CHLY_HEVBR (Hevamine-A OS=Hevea brasiliensis PE=1 SV=2)

HSP 1 Score: 177.6 bits (449), Expect = 1.7e-43
Identity = 94/197 (47.72%), Postives = 120/197 (60.91%), Query Frame = 1 

Query: 1   MLSIGGGVGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 60
           MLS+GGG+G Y L +  +A N + YLWNNFLGG+S+SRPL D V DG+D   E  S   W
Sbjct: 101 MLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLDGIDFDIEHGSTLYW 160

Query: 61  SKLGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLVCQYLN 120
             L   L   Y KQ KK YL+AAPQC   D    +    G+FDY+ VQF+ NN  CQY +
Sbjct: 161 DDLARYL-SAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWVQFY-NNPPCQYSS 220

Query: 121 GRLEGFWKFWNSW-KMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSKFGGV 180
           G +      WN W    NA K+F+ L A P A   GY+ PDV  + +LPE+++S K+GGV
Sbjct: 221 GNINNIINSWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGV 280

Query: 181 ILWSEDLD--RGYSSEI 195
           +LWS+  D   GYSS I
Sbjct: 281 MLWSKFYDDKNGYSSSI 295

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BLAST of Cucsa.258830 vs. Swiss-Prot
Match: CHIA_TOBAC (Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.8e-42
Identity = 87/194 (44.85%), Postives = 119/194 (61.34%), Query Frame = 1 

Query: 1   MLSIGGGVGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 60
           MLS+GGG G Y L++  +A N + YLWNN+LGGQSN+RPL D V DG+D   E  +  +W
Sbjct: 97  MLSLGGGAGSYFLSSADDARNVANYLWNNYLGGQSNTRPLGDAVLDGIDFDIEGGTTQHW 156

Query: 61  SKLGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLVCQYLN 120
            +L + L +    Q++K YL+AAPQC   D+  +     G+FDY+ VQF+ NN  CQY  
Sbjct: 157 DELAKTLSQF--SQQRKVYLTAAPQCPFPDTWLNGALSTGLFDYVWVQFY-NNPPCQYSG 216

Query: 121 GRLEGFWKFWNSWKMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSKFGGVI 180
           G  +    +WN W    A K+F+ L A   A   G+I  DV  ++VLP +  S K+GGV+
Sbjct: 217 GSADNLKNYWNQWNAIQAGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVM 276

Query: 181 LWSEDLDRGYSSEI 195
           LWS+  D GYSS I
Sbjct: 277 LWSKFYDNGYSSAI 287

[Close]
BLAST of Cucsa.258830 vs. Swiss-Prot
Match: CHIA_ARATH (Acidic endochitinase OS=Arabidopsis thaliana GN=CHIB1 PE=2 SV=2)

HSP 1 Score: 161.8 bits (408), Expect = 9.4e-39
Identity = 86/197 (43.65%), Postives = 116/197 (58.88%), Query Frame = 1 

Query: 1   MLSIGGGVGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 60
           MLS+GGG+G Y++ +  +A   + YLWNNFLGG+S+SRPL D V DG+D   E  S  +W
Sbjct: 104 MLSLGGGIGNYSIGSREDAKVIADYLWNNFLGGKSSSRPLGDAVLDGIDFNIELGSPQHW 163

Query: 61  SKLGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLVCQYLN 120
             L   L K +  + +K YL+ APQC   D    S      FDY+ +QF+ NN  C Y +
Sbjct: 164 DDLARTLSK-FSHRGRKIYLTGAPQCPFPDRLMGSALNTKRFDYVWIQFY-NNPPCSYSS 223

Query: 121 GRLEGFWKFWNSW-KMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSKFGGV 180
           G  +  +  WN W     A K F+ L A P A   GYI PDV  +++LP L++S K+GGV
Sbjct: 224 GNTQNLFDSWNKWTTSIAAQKFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGV 283

Query: 181 ILWSE--DLDRGYSSEI 195
           +LWS+  D   GYSS I
Sbjct: 284 MLWSKFWDDKNGYSSSI 298

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BLAST of Cucsa.258830 vs. Swiss-Prot
Match: CHIT3_VITVI (Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.6e-38
Identity = 87/199 (43.72%), Postives = 121/199 (60.80%), Query Frame = 1 

Query: 1   MLSIGGGVGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 60
           MLSIGGG G Y+L++  +A N + YLWNNFLGGQS+SRPL D V DG+D   E  S  +W
Sbjct: 100 MLSIGGGAGSYSLSSSNDAQNVANYLWNNFLGGQSSSRPLGDAVLDGIDFDIELGSTLHW 159

Query: 61  SKLGEELRKL-YEKQR-KKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLVCQY 120
             L   L ++ ++++R +K YL+AAPQC   D    +    G+FDY+ VQF+ NN  CQY
Sbjct: 160 DDLARALSRIEFQQERGRKVYLTAAPQCPFPDKVPGTALNTGLFDYVWVQFY-NNPPCQY 219

Query: 121 LNGRLEGFWKFWNSW-KMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSKFG 180
            +G        WN W    N+   F+ L A   A   G+I  +V  +++LP +++S K+G
Sbjct: 220 SSGNTNNLLNSWNRWTSSINSTGSFMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYG 279

Query: 181 GVILWSE--DLDRGYSSEI 195
           GV+LWS+  D   GYSS I
Sbjct: 280 GVMLWSKYYDDQSGYSSSI 297

[Close]
BLAST of Cucsa.258830 vs. Swiss-Prot
Match: CHIA_CICAR (Acidic endochitinase OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.0e-37
Identity = 87/197 (44.16%), Postives = 116/197 (58.88%), Query Frame = 1 

Query: 1   MLSIGGGVGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 60
           +LS+GGG G Y+LN+  EAT  + YLWNNFLGG S SRPL D V DG+D   E S   ++
Sbjct: 98  LLSLGGGAGSYSLNSAEEATTLANYLWNNFLGGTSTSRPLGDAVLDGIDFDIE-SGGQHY 157

Query: 61  SKLGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLVCQYLN 120
            +L + L       ++K YLSAAPQC   D+   S  Q G+FDY+ VQF+ NN  CQY N
Sbjct: 158 DELAKALNGF---SQQKVYLSAAPQCPYPDAHLDSAIQTGLFDYVWVQFY-NNPQCQYSN 217

Query: 121 GRLEGFWKFWNSWKMFNADKVFVKLLAGPMAEDMGYIRP-DVFRTEVLPELQQSSKFGGV 180
           G +      WN W    A +VF+ + A   A   G + P DV  ++VLP ++ S K+GGV
Sbjct: 218 GNINNLVNAWNQWTSSQAKQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGV 277

Query: 181 ILWS--EDLDRGYSSEI 195
           ++W    D   GYS+ I
Sbjct: 278 MIWDRFNDAQSGYSNAI 289

[Close]
BLAST of Cucsa.258830 vs. TrEMBL
Match: A0A0A0L410_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G120470 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 1.5e-136
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 1 

Query: 1   MLSIGGGVGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 60
           MLSIGGGVGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW
Sbjct: 101 MLSIGGGVGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 160

Query: 61  SKLGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLVCQYLN 120
           SKLGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLVCQYLN
Sbjct: 161 SKLGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLVCQYLN 220

Query: 121 GRLEGFWKFWNSWKMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSKFGGVI 180
           GRLEGFWKFWNSWKMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSKFGGVI
Sbjct: 221 GRLEGFWKFWNSWKMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSKFGGVI 280

Query: 181 LWSEDLDRGYSSEINPKACGSVEAASESANEVAEFPMGNNYAGQRGFRSCRGSCVL 237
           LWSEDLDRGYSSEINPKACGSVEAASESANEVAEFPMGNNYAGQRGFRSCRGSCVL
Sbjct: 281 LWSEDLDRGYSSEINPKACGSVEAASESANEVAEFPMGNNYAGQRGFRSCRGSCVL 336

[Close]
BLAST of Cucsa.258830 vs. TrEMBL
Match: A0A142BTQ7_CUCME (Chitinase 2 OS=Cucumis melo PE=2 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 1.4e-126
Identity = 216/236 (91.53%), Postives = 227/236 (96.19%), Query Frame = 1 

Query: 1   MLSIGGGVGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 60
           MLS+GGG GKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW
Sbjct: 101 MLSVGGGSGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 160

Query: 61  SKLGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLVCQYLN 120
           SKLGEEL KLYEKQ KKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFG+NLVCQYLN
Sbjct: 161 SKLGEELGKLYEKQGKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGDNLVCQYLN 220

Query: 121 GRLEGFWKFWNSWKMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSKFGGVI 180
           GR EGFWKFWN WK F+ADKVFV++LAGPMAEDMGYI PDVFR+EVLPELQ+SSKFGGVI
Sbjct: 221 GRFEGFWKFWNVWKTFSADKVFVQMLAGPMAEDMGYIPPDVFRSEVLPELQRSSKFGGVI 280

Query: 181 LWSEDLDRGYSSEINPKACGSVEAASESANEVAEFPMGNNYAGQRGFRSCRGSCVL 237
           LWSED+D+GYSS+INPK CGSVEAASESANE+AEFPMGNNY GQRGFRSCRGSCVL
Sbjct: 281 LWSEDIDKGYSSKINPKVCGSVEAASESANEIAEFPMGNNYVGQRGFRSCRGSCVL 336

[Close]
BLAST of Cucsa.258830 vs. TrEMBL
Match: A0A161I6S0_CUCME (Chitinase OS=Cucumis melo GN=cht PE=2 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.2e-125
Identity = 215/236 (91.10%), Postives = 226/236 (95.76%), Query Frame = 1 

Query: 1   MLSIGGGVGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 60
           MLS+GGG GKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW
Sbjct: 101 MLSVGGGSGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 160

Query: 61  SKLGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLVCQYLN 120
           SKLGEEL KLYEKQ KKFYLSAAPQCSSLDSSS SIPQPGIFDYISVQFFG+NLVCQYLN
Sbjct: 161 SKLGEELGKLYEKQGKKFYLSAAPQCSSLDSSSQSIPQPGIFDYISVQFFGDNLVCQYLN 220

Query: 121 GRLEGFWKFWNSWKMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSKFGGVI 180
           GR EGFWKFWN WK F+ADKVFV++LAGPMAEDMGYI PDVFR+EVLPELQ+SSKFGGVI
Sbjct: 221 GRFEGFWKFWNVWKTFSADKVFVQMLAGPMAEDMGYIPPDVFRSEVLPELQRSSKFGGVI 280

Query: 181 LWSEDLDRGYSSEINPKACGSVEAASESANEVAEFPMGNNYAGQRGFRSCRGSCVL 237
           LWSED+D+GYSS+INPK CGSVEAASESANE+AEFPMGNNY GQRGFRSCRGSCVL
Sbjct: 281 LWSEDIDKGYSSKINPKVCGSVEAASESANEIAEFPMGNNYVGQRGFRSCRGSCVL 336

[Close]
BLAST of Cucsa.258830 vs. TrEMBL
Match: A0A0A0LLK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G193360 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.6e-56
Identity = 121/241 (50.21%), Postives = 152/241 (63.07%), Query Frame = 1 

Query: 2   LSIGGGVGKYNLN--NFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDN 61
           LSIGGG G Y LN  N  +ATN + YLWNNFLGG+S+SRPL D V DG+D     + WD 
Sbjct: 98  LSIGGGAGSYTLNSTNDDDATNDALYLWNNFLGGESSSRPLGDAVLDGIDFV---AGWDP 157

Query: 62  WSK----LGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLV 121
            SK    L   L K  E+ + K YLSAAP+C   D++       G+FDY+ V FF NN  
Sbjct: 158 SSKHRDKLARALMKYKEQSKGKIYLSAAPECPFPDANLQPAINTGVFDYVWVLFF-NNPS 217

Query: 122 CQYLNGRLEGFWKFWNSWKMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSK 181
           C Y +G L+     W+ W   NA +VFV L A P     GYI PDV R  VLPEL+++SK
Sbjct: 218 CDYSDGSLDNLLASWSKWTKINAGEVFVFLPAAPEVAHSGYIPPDVVRNRVLPELKRNSK 277

Query: 182 FGGVILWSEDLDRGYSSEINPKACGSVEAASESANEVAEFPMGNNYAGQRGFRSCRGSCV 237
           FGGVILWS + DRGYSS I+   CGS  A S++ +++A  PMGN Y   +GFR+CRG+C+
Sbjct: 278 FGGVILWSREYDRGYSSSISQIVCGS--AWSDTTSDMALLPMGNKYGDTQGFRTCRGTCM 332

[Close]
BLAST of Cucsa.258830 vs. TrEMBL
Match: A0A0V0IJS7_SOLCH (Putative acidic endochitinase-like OS=Solanum chacoense PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 4.0e-44
Identity = 92/196 (46.94%), Postives = 122/196 (62.24%), Query Frame = 1 

Query: 1   MLSIGGGVGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 60
           MLS+GGGVG Y+L++  +A N + YLWNN+LGGQS SRPL D + DG+D   ER +  +W
Sbjct: 98  MLSLGGGVGSYSLSSANDARNVANYLWNNYLGGQSTSRPLGDAILDGIDFDIERGTTQHW 157

Query: 61  SKLGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLVCQYLN 120
            +L   L      Q++K YL+AAPQC   DS  +     G+FDY+ VQF+ NN  CQY  
Sbjct: 158 DELARALSGF--SQQRKVYLTAAPQCPFPDSWLNGALSTGLFDYVWVQFY-NNPPCQYSG 217

Query: 121 GRLEGFWKFWNSWKMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSKFGGVI 180
           G +E    +WN W    A K+F+ L A P A   G+I  DV  ++VLP +  S K+GGV+
Sbjct: 218 GSVENLKSYWNKWTAIQAGKIFLGLPAAPGAAGSGFIPSDVLVSQVLPAISGSPKYGGVM 277

Query: 181 LWSEDLDRGYSSEINP 197
           LWS+  D GYSS I P
Sbjct: 278 LWSKFYDNGYSSAIKP 290

[Close]
BLAST of Cucsa.258830 vs. TAIR10
Match: AT5G24090.1 (AT5G24090.1 chitinase A)

HSP 1 Score: 161.8 bits (408), Expect = 5.3e-40
Identity = 86/197 (43.65%), Postives = 116/197 (58.88%), Query Frame = 1 

Query: 1   MLSIGGGVGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 60
           MLS+GGG+G Y++ +  +A   + YLWNNFLGG+S+SRPL D V DG+D   E  S  +W
Sbjct: 104 MLSLGGGIGNYSIGSREDAKVIADYLWNNFLGGKSSSRPLGDAVLDGIDFNIELGSPQHW 163

Query: 61  SKLGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLVCQYLN 120
             L   L K +  + +K YL+ APQC   D    S      FDY+ +QF+ NN  C Y +
Sbjct: 164 DDLARTLSK-FSHRGRKIYLTGAPQCPFPDRLMGSALNTKRFDYVWIQFY-NNPPCSYSS 223

Query: 121 GRLEGFWKFWNSW-KMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSKFGGV 180
           G  +  +  WN W     A K F+ L A P A   GYI PDV  +++LP L++S K+GGV
Sbjct: 224 GNTQNLFDSWNKWTTSIAAQKFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGV 283

Query: 181 ILWSE--DLDRGYSSEI 195
           +LWS+  D   GYSS I
Sbjct: 284 MLWSKFWDDKNGYSSSI 298

[Close]
BLAST of Cucsa.258830 vs. NCBI nr
Match: gi|449433057|ref|XP_004134314.1| (PREDICTED: acidic endochitinase-like [Cucumis sativus])

HSP 1 Score: 493.4 bits (1269), Expect = 2.2e-136
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 1 

Query: 1   MLSIGGGVGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 60
           MLSIGGGVGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW
Sbjct: 101 MLSIGGGVGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 160

Query: 61  SKLGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLVCQYLN 120
           SKLGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLVCQYLN
Sbjct: 161 SKLGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLVCQYLN 220

Query: 121 GRLEGFWKFWNSWKMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSKFGGVI 180
           GRLEGFWKFWNSWKMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSKFGGVI
Sbjct: 221 GRLEGFWKFWNSWKMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSKFGGVI 280

Query: 181 LWSEDLDRGYSSEINPKACGSVEAASESANEVAEFPMGNNYAGQRGFRSCRGSCVL 237
           LWSEDLDRGYSSEINPKACGSVEAASESANEVAEFPMGNNYAGQRGFRSCRGSCVL
Sbjct: 281 LWSEDLDRGYSSEINPKACGSVEAASESANEVAEFPMGNNYAGQRGFRSCRGSCVL 336

[Close]
BLAST of Cucsa.258830 vs. NCBI nr
Match: gi|1004356872|gb|AMP41495.1| (chitinase 2 [Cucumis melo])

HSP 1 Score: 460.3 bits (1183), Expect = 2.0e-126
Identity = 216/236 (91.53%), Postives = 227/236 (96.19%), Query Frame = 1 

Query: 1   MLSIGGGVGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 60
           MLS+GGG GKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW
Sbjct: 101 MLSVGGGSGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 160

Query: 61  SKLGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLVCQYLN 120
           SKLGEEL KLYEKQ KKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFG+NLVCQYLN
Sbjct: 161 SKLGEELGKLYEKQGKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGDNLVCQYLN 220

Query: 121 GRLEGFWKFWNSWKMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSKFGGVI 180
           GR EGFWKFWN WK F+ADKVFV++LAGPMAEDMGYI PDVFR+EVLPELQ+SSKFGGVI
Sbjct: 221 GRFEGFWKFWNVWKTFSADKVFVQMLAGPMAEDMGYIPPDVFRSEVLPELQRSSKFGGVI 280

Query: 181 LWSEDLDRGYSSEINPKACGSVEAASESANEVAEFPMGNNYAGQRGFRSCRGSCVL 237
           LWSED+D+GYSS+INPK CGSVEAASESANE+AEFPMGNNY GQRGFRSCRGSCVL
Sbjct: 281 LWSEDIDKGYSSKINPKVCGSVEAASESANEIAEFPMGNNYVGQRGFRSCRGSCVL 336

[Close]
BLAST of Cucsa.258830 vs. NCBI nr
Match: gi|659075113|ref|XP_008437972.1| (PREDICTED: acidic endochitinase-like [Cucumis melo])

HSP 1 Score: 460.3 bits (1183), Expect = 2.0e-126
Identity = 216/236 (91.53%), Postives = 227/236 (96.19%), Query Frame = 1 

Query: 1   MLSIGGGVGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 60
           MLS+GGG GKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW
Sbjct: 101 MLSVGGGSGKYNLNNFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDNW 160

Query: 61  SKLGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLVCQYLN 120
           SKLGEEL KLYEKQ KKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFG+NLVCQYLN
Sbjct: 161 SKLGEELGKLYEKQGKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGDNLVCQYLN 220

Query: 121 GRLEGFWKFWNSWKMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSKFGGVI 180
           GR EGFWKFWN WK F+ADKVFV++LAGPMAEDMGYI PDVFR+EVLPELQ+SSKFGGVI
Sbjct: 221 GRFEGFWKFWNVWKTFSADKVFVQMLAGPMAEDMGYIPPDVFRSEVLPELQRSSKFGGVI 280

Query: 181 LWSEDLDRGYSSEINPKACGSVEAASESANEVAEFPMGNNYAGQRGFRSCRGSCVL 237
           LWSED+D+GYSS+INPK CGSVEAASESANE+AEFPMGNNY GQRGFRSCRGSCVL
Sbjct: 281 LWSEDIDKGYSSKINPKVCGSVEAASESANEIAEFPMGNNYVGQRGFRSCRGSCVL 336

[Close]
BLAST of Cucsa.258830 vs. NCBI nr
Match: gi|449465380|ref|XP_004150406.1| (PREDICTED: acidic endochitinase-like [Cucumis sativus])

HSP 1 Score: 226.9 bits (577), Expect = 3.8e-56
Identity = 121/241 (50.21%), Postives = 152/241 (63.07%), Query Frame = 1 

Query: 2   LSIGGGVGKYNLN--NFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDN 61
           LSIGGG G Y LN  N  +ATN + YLWNNFLGG+S+SRPL D V DG+D     + WD 
Sbjct: 98  LSIGGGAGSYTLNSTNDDDATNDALYLWNNFLGGESSSRPLGDAVLDGIDFV---AGWDP 157

Query: 62  WSK----LGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLV 121
            SK    L   L K  E+ + K YLSAAP+C   D++       G+FDY+ V FF NN  
Sbjct: 158 SSKHRDKLARALMKYKEQSKGKIYLSAAPECPFPDANLQPAINTGVFDYVWVLFF-NNPS 217

Query: 122 CQYLNGRLEGFWKFWNSWKMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSK 181
           C Y +G L+     W+ W   NA +VFV L A P     GYI PDV R  VLPEL+++SK
Sbjct: 218 CDYSDGSLDNLLASWSKWTKINAGEVFVFLPAAPEVAHSGYIPPDVVRNRVLPELKRNSK 277

Query: 182 FGGVILWSEDLDRGYSSEINPKACGSVEAASESANEVAEFPMGNNYAGQRGFRSCRGSCV 237
           FGGVILWS + DRGYSS I+   CGS  A S++ +++A  PMGN Y   +GFR+CRG+C+
Sbjct: 278 FGGVILWSREYDRGYSSSISQIVCGS--AWSDTTSDMALLPMGNKYGDTQGFRTCRGTCM 332

[Close]
BLAST of Cucsa.258830 vs. NCBI nr
Match: gi|659130469|ref|XP_008465189.1| (PREDICTED: acidic endochitinase-like [Cucumis melo])

HSP 1 Score: 201.4 bits (511), Expect = 1.7e-48
Identity = 109/223 (48.88%), Postives = 138/223 (61.88%), Query Frame = 1 

Query: 2   LSIGGGVGKYNLN--NFTEATNFSTYLWNNFLGGQSNSRPLNDVVFDGVDITNERSSWDN 61
           LSIGGG G Y LN  N  +ATN + YLWNNFLGG+S+SRPL + V DG+D     ++WD 
Sbjct: 98  LSIGGGAGSYTLNFTNDDDATNDALYLWNNFLGGKSSSRPLGEAVLDGIDFV---AAWDQ 157

Query: 62  WSK----LGEELRKLYEKQRKKFYLSAAPQCSSLDSSSHSIPQPGIFDYISVQFFGNNLV 121
            +K    L   L K  E+ R K YLSAAP+C   D+        G+FDY+ VQFF NN  
Sbjct: 158 SAKHRDMLARALMKYKEQSRSKIYLSAAPECPFPDADLQPAINTGVFDYVWVQFF-NNPP 217

Query: 122 CQYLNGRLEGFWKFWNSWKMFNADKVFVKLLAGPMAEDMGYIRPDVFRTEVLPELQQSSK 181
           C Y +G L+     W  W   NA +VF  L A P     GYI PD  R+ VLPEL+++SK
Sbjct: 218 CDYSHGSLDNLLASWTKWTEINAGEVFALLPAAPQVAFSGYIPPDAVRSLVLPELKRNSK 277

Query: 182 FGGVILWSEDLDRGYSSEINPKACGSVEAASESANEVAEFPMG 219
           FGGVILWS + DRGYSS I+ + CGS  A S++ +++A  PMG
Sbjct: 278 FGGVILWSREYDRGYSSSISQQVCGS--AWSDTTSDMALLPMG 314

The following BLAST results are available for this feature:
BLAST of Cucsa.258830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHLY_HEVBR1.7e-4347.72Hevamine-A OS=Hevea brasiliensis PE=1 SV=2[more]
CHIA_TOBAC1.8e-4244.85Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=1[more]
CHIA_ARATH9.4e-3943.65Acidic endochitinase OS=Arabidopsis thaliana GN=CHIB1 PE=2 SV=2[more]
CHIT3_VITVI1.6e-3843.72Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE=2 SV=1[more]
CHIA_CICAR1.0e-3744.16Acidic endochitinase OS=Cicer arietinum PE=2 SV=1[more]
BLAST of Cucsa.258830 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L410_CUCSA1.5e-136100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G120470 PE=4 SV=1[more]
A0A142BTQ7_CUCME1.4e-12691.53Chitinase 2 OS=Cucumis melo PE=2 SV=1[more]
A0A161I6S0_CUCME1.2e-12591.10Chitinase OS=Cucumis melo GN=cht PE=2 SV=1[more]
A0A0A0LLK9_CUCSA2.6e-5650.21Uncharacterized protein OS=Cucumis sativus GN=Csa_2G193360 PE=4 SV=1[more]
A0A0V0IJS7_SOLCH4.0e-4446.94Putative acidic endochitinase-like OS=Solanum chacoense PE=3 SV=1[more]
BLAST of Cucsa.258830 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G24090.15.3e-4043.65 chitinase A[more]
BLAST of Cucsa.258830 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449433057|ref|XP_004134314.1|2.2e-136100.00PREDICTED: acidic endochitinase-like [Cucumis sativus][more]
gi|1004356872|gb|AMP41495.1|2.0e-12691.53chitinase 2 [Cucumis melo][more]
gi|659075113|ref|XP_008437972.1|2.0e-12691.53PREDICTED: acidic endochitinase-like [Cucumis melo][more]
gi|449465380|ref|XP_004150406.1|3.8e-5650.21PREDICTED: acidic endochitinase-like [Cucumis sativus][more]
gi|659130469|ref|XP_008465189.1|1.7e-4848.88PREDICTED: acidic endochitinase-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001223Glyco_hydro18_cat
IPR013781Glycoside hydrolase, catalytic domain
IPR017853Glycoside_hydrolase_SF
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.258830.1Cucsa.258830.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001223Glycoside hydrolase family 18, catalytic domainPFAMPF00704Glyco_hydro_18coord: 1..111
score: 3.1
IPR013781Glycoside hydrolase, catalytic domainGENE3DG3DSA:3.20.20.80coord: 1..190
score: 1.8
IPR017853Glycoside hydrolase superfamilyunknownSSF51445(Trans)glycosidasescoord: 1..188
score: 3.16
NoneNo IPR availablePANTHERPTHR11177CHITINASEcoord: 1..194
score: 1.2
NoneNo IPR availablePANTHERPTHR11177:SF170SUBFAMILY NOT NAMEDcoord: 1..194
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.258830CmaCh14G020760Cucurbita maxima (Rimu)cgycmaB0709
Cucsa.258830CmoCh14G021330Cucurbita moschata (Rifu)cgycmoB0700
Cucsa.258830MELO3C006069.2Melon (DHL92) v3.6.1cgymedB432
Cucsa.258830CsaV3_3G008480Cucumber (Chinese Long) v3cgycucB387
Cucsa.258830Bhi01G000294Wax gourdcgywgoB514
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.258830Cucumber (Chinese Long) v3cgycucB391
Cucsa.258830Cucumber (Chinese Long) v3cgycucB393
Cucsa.258830Watermelon (97103) v2cgywmbB445
Cucsa.258830Watermelon (97103) v2cgywmbB450
Cucsa.258830Watermelon (97103) v2cgywmbB452
Cucsa.258830Wax gourdcgywgoB507
Cucsa.258830Wax gourdcgywgoB519
Cucsa.258830Cucumber (Gy14) v1cgycgyB055
Cucsa.258830Cucumber (Gy14) v1cgycgyB086
Cucsa.258830Cucumber (Gy14) v1cgycgyB116
Cucsa.258830Cucurbita maxima (Rimu)cgycmaB0705
Cucsa.258830Cucurbita maxima (Rimu)cgycmaB0720
Cucsa.258830Cucurbita maxima (Rimu)cgycmaB0724
Cucsa.258830Cucurbita moschata (Rifu)cgycmoB0701
Cucsa.258830Cucurbita moschata (Rifu)cgycmoB0703
Cucsa.258830Cucurbita moschata (Rifu)cgycmoB0712
Cucsa.258830Cucurbita moschata (Rifu)cgycmoB0718
Cucsa.258830Wild cucumber (PI 183967)cgycpiB383
Cucsa.258830Wild cucumber (PI 183967)cgycpiB385
Cucsa.258830Wild cucumber (PI 183967)cgycpiB387
Cucsa.258830Cucumber (Chinese Long) v2cgycuB366
Cucsa.258830Cucumber (Chinese Long) v2cgycuB367
Cucsa.258830Cucumber (Chinese Long) v2cgycuB369
Cucsa.258830Melon (DHL92) v3.5.1cgymeB426
Cucsa.258830Melon (DHL92) v3.5.1cgymeB438
Cucsa.258830Melon (DHL92) v3.5.1cgymeB439
Cucsa.258830Watermelon (Charleston Gray)cgywcgB446
Cucsa.258830Watermelon (Charleston Gray)cgywcgB449
Cucsa.258830Watermelon (Charleston Gray)cgywcgB451
Cucsa.258830Watermelon (Charleston Gray)cgywcgB456
Cucsa.258830Watermelon (97103) v1cgywmB477
Cucsa.258830Watermelon (97103) v1cgywmB479
Cucsa.258830Watermelon (97103) v1cgywmB481
Cucsa.258830Cucurbita pepo (Zucchini)cgycpeB0682
Cucsa.258830Cucurbita pepo (Zucchini)cgycpeB0685
Cucsa.258830Cucurbita pepo (Zucchini)cgycpeB0687
Cucsa.258830Bottle gourd (USVL1VR-Ls)cgylsiB413
Cucsa.258830Bottle gourd (USVL1VR-Ls)cgylsiB415
Cucsa.258830Melon (DHL92) v3.6.1cgymedB420
Cucsa.258830Melon (DHL92) v3.6.1cgymedB431
Cucsa.258830Silver-seed gourdcarcgyB0564
Cucsa.258830Silver-seed gourdcarcgyB1110