Cucsa.258770 (gene) Cucumber (Gy14) v1

NameCucsa.258770
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold02229 : 5573818 .. 5574858 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGTCATCGATTACGGGGCGGTTATATAATTGCTCTGTAAGATGAATATCAATCTGGTTCGTATTCACTGAGCGTTCCGTTTTTCTTTTTCCTTTAATTTTGAAATCGAAGGGTCCTATGGATGGGGCGCCATTGTAATCAATGCGCTTTGGCTCCAAGTTTGCCTTCGGAAATCGTAGTGAAAAGCAGATTGCCGAGCCAAGCTTCGAATAACTGGTTCGGCTTTCGAATTTTTAGTTTTTCATACAGATTTTTtCTTGCACATTTCTAGTTGTTTGACTTGAGCGAAGGTCCCAGCAGAGGGGAGGATAACTCTGAGATTGAGACCCCTCTAACTTTTAATTAAATCCTTCGCAGATTTAGCTGCCGAATCGTAGGACGCCCAAATCGTTATTAGTTTTGGATCGTCTTGAACCCTCGGCAACATTCGTTTCTAACCCCCATAATTTCTGTAGTTTATTAGGTTTTATTTCGTGGTTACTTTCTGAACAGTCTAATCTGATGACCCAAAATCTCTTTTGCTTTTTCTCTGTTGGGTTGTTTTTtGTTAGAACATTTGAGGAAGAAAATTAGATTTGTATGTGAAGCTGATGATGTTGATTATGGATCATTACCAGAGAAATGTGGAATTCGAACGAAAAACATAGATCTAAAAAATATATATATAGAGAGAGAAAATAACTGGAAATTAAAAATACTATCATCATTGGTAGTTCCCAAAATAGAATTGAAGATCAAGAAGAAAAACGTCTCAAATGCCTGACGATCAAATTGAGAAAAGTTACAGAATGCATTATACATATTTCTGGAGGAATAAGTGCAAATGCTAACGTTGAGTGATGGGTTTGGGAAAAAACTATAAAATCAAGAAATATAACGTCGAGTCATTCCAAAATTATTTCTTTGCCTTGTCTATTTTGCTTCCATAATAGACCCATACGGCAACCGTTAAATCTACTTGATTCCCTCACAATACATACATGTATGAGTCAGTAATGAGAGGTGGAGAGAGTCGACCCATACTACAAATAGATAG

mRNA sequence

ATGGAAAGTCATCGATTACGGGGCGAACATTTGAGGAAGAAAATTAGATTTGTATGTGAAGCTGATGATGTTGATTATGGATCATTACCAGAGAAATGTGGAATTCGAACGAAAAACATAGATCTAAAAAATATATATATAGAGAGAGAAAATAACTGGAAATTAAAAATACTATCATCATTGGTAGTTCCCAAAATAGAATTGAAGATCAAGAAGAAAAACGTCTCAAATGCCTGACGATCAAATTGAGAAAAGTTACAGAATGCATTATACATATTTCTGGAGGAATAAGTGCAAATGCTAACGTTGAGTGATGGGTTTGGGAAAAAACTATAAAATCAAGAAATATAACGTCGAGTCATTCCAAAATTATTTCTTTGCCTTGTCTATTTTGCTTCCATAATAGACCCATACGGCAACCGTTAAATCTACTTGATTCCCTCACAATACATACATGTATGAGTCAGTAATGAGAGGTGGAGAGAGTCGACCCATACTACAAATAGATAG

Coding sequence (CDS)

ATGGAAAGTCATCGATTACGGGGCGAACATTTGAGGAAGAAAATTAGATTTGTATGTGAAGCTGATGATGTTGATTATGGATCATTACCAGAGAAATGTGGAATTCGAACGAAAAACATAGATCTAAAAAATATATATATAGAGAGAGAAAATAACTGGAAATTAAAAATACTATCATCATTGGTAGTTCCCAAAATAGAATTGAAGATCAAGAAGAAAAACGTCTCAAATGCCTGA

Protein sequence

MESHRLRGEHLRKKIRFVCEADDVDYGSLPEKCGIRTKNIDLKNIYIERENNWKLKILSSLVVPKIELKIKKKNVSNA*
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.258770.1Cucsa.258770.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 65..78
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.258770Cucumber (Chinese Long) v3cgycucB387
Cucsa.258770Cucumber (Chinese Long) v3cgycucB391
Cucsa.258770Cucumber (Chinese Long) v3cgycucB393
Cucsa.258770Watermelon (97103) v2cgywmbB445
Cucsa.258770Watermelon (97103) v2cgywmbB450
Cucsa.258770Watermelon (97103) v2cgywmbB452
Cucsa.258770Wax gourdcgywgoB519
Cucsa.258770Cucumber (Gy14) v1cgycgyB055
Cucsa.258770Cucumber (Gy14) v1cgycgyB086
Cucsa.258770Cucumber (Gy14) v1cgycgyB116
Cucsa.258770Cucurbita maxima (Rimu)cgycmaB0705
Cucsa.258770Cucurbita maxima (Rimu)cgycmaB0709
Cucsa.258770Cucurbita maxima (Rimu)cgycmaB0720
Cucsa.258770Cucurbita maxima (Rimu)cgycmaB0724
Cucsa.258770Cucurbita moschata (Rifu)cgycmoB0700
Cucsa.258770Cucurbita moschata (Rifu)cgycmoB0701
Cucsa.258770Cucurbita moschata (Rifu)cgycmoB0703
Cucsa.258770Cucurbita moschata (Rifu)cgycmoB0712
Cucsa.258770Cucurbita moschata (Rifu)cgycmoB0718
Cucsa.258770Wild cucumber (PI 183967)cgycpiB383
Cucsa.258770Wild cucumber (PI 183967)cgycpiB385
Cucsa.258770Wild cucumber (PI 183967)cgycpiB387
Cucsa.258770Cucumber (Chinese Long) v2cgycuB366
Cucsa.258770Cucumber (Chinese Long) v2cgycuB367
Cucsa.258770Cucumber (Chinese Long) v2cgycuB369
Cucsa.258770Melon (DHL92) v3.5.1cgymeB426
Cucsa.258770Melon (DHL92) v3.5.1cgymeB438
Cucsa.258770Melon (DHL92) v3.5.1cgymeB439
Cucsa.258770Watermelon (Charleston Gray)cgywcgB446
Cucsa.258770Watermelon (Charleston Gray)cgywcgB449
Cucsa.258770Watermelon (Charleston Gray)cgywcgB451
Cucsa.258770Watermelon (Charleston Gray)cgywcgB456
Cucsa.258770Watermelon (97103) v1cgywmB477
Cucsa.258770Watermelon (97103) v1cgywmB479
Cucsa.258770Watermelon (97103) v1cgywmB481
Cucsa.258770Cucurbita pepo (Zucchini)cgycpeB0682
Cucsa.258770Cucurbita pepo (Zucchini)cgycpeB0685
Cucsa.258770Cucurbita pepo (Zucchini)cgycpeB0687
Cucsa.258770Bottle gourd (USVL1VR-Ls)cgylsiB413
Cucsa.258770Bottle gourd (USVL1VR-Ls)cgylsiB415
Cucsa.258770Melon (DHL92) v3.6.1cgymedB420
Cucsa.258770Melon (DHL92) v3.6.1cgymedB431
Cucsa.258770Melon (DHL92) v3.6.1cgymedB432
Cucsa.258770Silver-seed gourdcarcgyB0564
Cucsa.258770Silver-seed gourdcarcgyB1110