Cucsa.255510 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.255510
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
Description60S ribosomal protein L14, putative
Locationscaffold02229 : 3476800 .. 3478755 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTGCGACTGTATAGTCTTCTTTCTTCTCTCGCCCCTCTCTCAAACCCTTCACACACCGAACATGGTAAGCATTCACCTTCACAGTTTATCTCTTTCTAACTACCAATCTACATCGTCTTTTGCTATAATGTCCTGCCATTCTTTTTTGTTTTCTGCGAATCGTGTCTGATTTTTGTGTTCTTTTATGATTTCCATAGCCTTTCAAGAGGTTCGTTGAGATCGGGAGAGTCGCTCTCGTTAACTATGGCGAAGACTACGGAAAGCTTGTCGTCATTGTCGATGTTATTGACCAGAACAGAGTATGTTTCTTTCTCCTATTACTTGTGGTTTTTTATTCAAGGTTTACTAGTTTTCATTTTGCATTAGAAACTTTCTCTTTTACTATTGTTATTCTTGTACTGTAGATTAGATTTCCCTGAGTTTGATGTTTACACCATGACCCGAAGATATGCCTCTCATTATTTAGTTTATTATAATGATCTAAACGTTTACGAAAACCATTCTATAGCTTAATTTTGAAGTGTGGTGACTGTTGAAACAATTTAGGGCATTTCTTATTCATCTTCACGTTTATTAAGTGGGTCTTTAGGTAGCTTTTGTTGATTCGTTAGTGGGTTGAGGATACAACTTGTAACTGATAGATGGTTACCTTGAAGGCTGAATGTGTTTTCTTTGACTGATTCTCTTCCAACCCAAAGGGATGTTTGGCTTATAGTTGTATTTATGATTGTTTGAGGATCATATGATTTTTAATTTTTTTTTTAGGGCTTCCCTTGAGCTTACAAGGCAGATAAATGACCTATTGGTTGTTTGTAGTAGACCTTGATTCTTGTCTCATGGGAAGTGTTGTATTTTTCTCTCCCAAGTTTCCATCTAAATGTAATTAGAGAATATACCCTCGACCTATTCTCTTTTGGATAAGAAAGGATTTGAATGGAATTTGTTTATGTATCTGTTTTTTTTTTGTTGAAATTTGGTGGTCACGAAGTTTTAGTTTCAATATTTAATTAGTTGCTACCAACACGAGCACAGCCTTGTGGGGTTAAGGGATCTATACCTCCTCTGCTAAGTTGGAGGTACAAATCTCCCACCTCATTCTCACAAAAAGCTTTTACGAGTTGCTCATTCTATTTATTTTTGTTCATGCTACAGGCTTTGGTTGATGCTCCTGATATGGTTAGGTCCCAAATGAACTTTAAGAGACTTTCTCTTACTGACATTAAAATTGACATTAAGAGAGTCCCTCGGAAGAAGGAACTCATTGAAGCTATGAAGGCTGGCGGTATGCATTTCAACTTATTTCACGTTTTAATACCTCCTCTCTACCTTGGTGTTGTTTTTGTTTGTTTAAAGTTTAAACCTAACCCATTATTTTGATCATGTCAGATGTTCAAAAAAAGTGGGAGGATAGCTCTTGGGGTAGAAAATTGCTTGTCAAGAAAAGGAGGGCAGCCCTGAATGATTTTGATAGGTTCAAGCTAATGTTGGCCAAGATAAAGGTCAGTAACACTTCCCATTGCATATTCTGTTTACCTTTTTCATATCCATCATTGTGTGTAAGAGTTATAAACCTTAAGGATATTCAATAGAAACCTGACTTAATCATCTGGAAGGAATCTTTTTTGTTTCTATCGTTTCTCATGTGCTTGATTTGTAGCAACTCACTACTTACAATCTTTTTGCAGAGAGCTGGATTGGTCAGGCAAGAGCTTTCGAAGCTGAAGAAGAGCCAATCTTAGAAGTGCATTTTGTTTAGAGCTTCAAATTTTGTTAGAGAACAATTTACCAGGTGTGGTTTGTTATCCCTTTTGTTTCTCAAATTCTTGAGACTGGGGGCTGTATCTGAATGCATGGAATTTTGGACATCAAGTGTAGCGAGTTTTTCCTAATGTGCCAACATTAATCGAATTAAATTAAAAATACATGCTTGAACCTGGTAGTTTTTCCCCTGCTA

mRNA sequence

CATTGCGACTGTATAGTCTTCTTTCTTCTCTCGCCCCTCTCTCAAACCCTTCACACACCGAACATGCCTTTCAAGAGGTTCGTTGAGATCGGGAGAGTCGCTCTCGTTAACTATGGCGAAGACTACGGAAAGCTTGTCGTCATTGTCGATGTTATTGACCAGAACAGAGCTTTGGTTGATGCTCCTGATATGGTTAGGTCCCAAATGAACTTTAAGAGACTTTCTCTTACTGACATTAAAATTGACATTAAGAGAGTCCCTCGGAAGAAGGAACTCATTGAAGCTATGAAGGCTGGCGATGTTCAAAAAAAGTGGGAGGATAGCTCTTGGGGTAGAAAATTGCTTGTCAAGAAAAGGAGGGCAGCCCTGAATGATTTTGATAGGTTCAAGCTAATGTTGGCCAAGATAAAGAGAGCTGGATTGGTCAGGCAAGAGCTTTCGAAGCTGAAGAAGAGCCAATCTTAGAAGTGCATTTTGTTTAGAGCTTCAAATTTTGTTAGAGAACAATTTACCAGGTGTGGTTTGTTATCCCTTTTGTTTCTCAAATTCTTGAGACTGGGGGCTGTATCTGAATGCATGGAATTTTGGACATCAAGTGTAGCGAGTTTTTCCTAATGTGCCAACATTAATCGAATTAAATTAAAAATACATGCTTGAACCTGGTAGTTTTTCCCCTGCTA

Coding sequence (CDS)

ATGCCTTTCAAGAGGTTCGTTGAGATCGGGAGAGTCGCTCTCGTTAACTATGGCGAAGACTACGGAAAGCTTGTCGTCATTGTCGATGTTATTGACCAGAACAGAGCTTTGGTTGATGCTCCTGATATGGTTAGGTCCCAAATGAACTTTAAGAGACTTTCTCTTACTGACATTAAAATTGACATTAAGAGAGTCCCTCGGAAGAAGGAACTCATTGAAGCTATGAAGGCTGGCGATGTTCAAAAAAAGTGGGAGGATAGCTCTTGGGGTAGAAAATTGCTTGTCAAGAAAAGGAGGGCAGCCCTGAATGATTTTGATAGGTTCAAGCTAATGTTGGCCAAGATAAAGAGAGCTGGATTGGTCAGGCAAGAGCTTTCGAAGCTGAAGAAGAGCCAATCTTAG

Protein sequence

MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGLVRQELSKLKKSQS*
Homology
[Close]
BLAST of Cucsa.255510 vs. Swiss-Prot
Match: RL141_ARATH (60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.1e-55
Identity = 109/130 (83.85%), Postives = 119/130 (91.54%), Query Frame = 1 

Query: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           M FKRFVEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDM R QMN KRLSLTDI I
Sbjct: 1   MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 60

Query: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120
           DI RVP+KK LIEAM+  DV+ KWE SSWGRKL+V+KRRAALNDFDRFK+MLAKIKRAG+
Sbjct: 61  DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 120

Query: 121 VRQELSKLKK 131
           VRQEL+KLK+
Sbjct: 121 VRQELAKLKR 130

[Close]
BLAST of Cucsa.255510 vs. Swiss-Prot
Match: RL14_PEA (Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 5.3e-55
Identity = 106/131 (80.92%), Postives = 121/131 (92.37%), Query Frame = 1 

Query: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRFVEIGRVAL+NYG+DYG+LVVIVDVIDQ RALVDAPDM RS +NFKRLSLTD+KI
Sbjct: 1   MPFKRFVEIGRVALINYGKDYGRLVVIVDVIDQTRALVDAPDMERSPINFKRLSLTDLKI 60

Query: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KK+LI+A++A DV+ KW  SSWGRKL+VKK RAALNDFDRFK+MLAKIKRA  
Sbjct: 61  DIKRVPKKKDLIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAG 120

Query: 121 VRQELSKLKKS 132
           VRQEL+KLKK+
Sbjct: 121 VRQELAKLKKT 131

[Close]
BLAST of Cucsa.255510 vs. Swiss-Prot
Match: RL142_ARATH (60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 9.0e-55
Identity = 107/130 (82.31%), Postives = 119/130 (91.54%), Query Frame = 1 

Query: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           M FKR+VEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI I
Sbjct: 1   MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60

Query: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120
           DI RVP+KK LIEAM+  DV+ KWE SSWGRKL+V+KRRA LNDFDRFK+MLAKIK+AG+
Sbjct: 61  DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120

Query: 121 VRQELSKLKK 131
           VRQEL+KLKK
Sbjct: 121 VRQELAKLKK 130

[Close]
BLAST of Cucsa.255510 vs. Swiss-Prot
Match: RL14_LUMRU (60S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 9.4e-28
Identity = 66/133 (49.62%), Postives = 86/133 (64.66%), Query Frame = 1 

Query: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAP--DMVRSQMNFKRLSLTDI 60
           M F+RFVEIGRVA   YG D GKLV IVDVIDQNRALVD P   + R  MNFK L LT++
Sbjct: 1   MSFRRFVEIGRVARAVYGPDQGKLVAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNL 60

Query: 61  KIDIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRA 120
           K       +   + +A +  ++ KKWE+S   +K+  K++R  L DF+RFKLM AK  R 
Sbjct: 61  KAKFPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARN 120

Query: 121 GLVRQELSKLKKS 132
            L++ E  KL+K+
Sbjct: 121 RLIKIEFGKLRKA 133

[Close]
BLAST of Cucsa.255510 vs. Swiss-Prot
Match: RL14_GRIJA (60S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.9e-27
Identity = 66/132 (50.00%), Postives = 91/132 (68.94%), Query Frame = 1 

Query: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPD--MVRSQMNFKRLSLTDI 60
           M F RFVE GRVALV+YGE   KLVVIVD++DQNR LVD+P   + R  +N KR++LT I
Sbjct: 1   MTFTRFVEAGRVALVSYGEHLNKLVVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSI 60

Query: 61  KI-DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKR 120
           K+ DI R     E+     A  V + +  S WG+KL  +++RAAL+DF RFK+M+A++K+
Sbjct: 61  KVDDIARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKK 120

Query: 121 AGLVRQELSKLK 130
           +  +  EL+KLK
Sbjct: 121 SKAINAELAKLK 132

[Close]
BLAST of Cucsa.255510 vs. TrEMBL
Match: A0A0A0L725_CUCSA (Csf-1 protein OS=Cucumis sativus GN=Csa_3G134920 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 2.1e-66
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKSQS 134
           VRQELSKLKKSQS
Sbjct: 121 VRQELSKLKKSQS 133

[Close]
BLAST of Cucsa.255510 vs. TrEMBL
Match: A0A0A0L4D3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134930 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 3.7e-63
Identity = 126/133 (94.74%), Postives = 131/133 (98.50%), Query Frame = 1 

Query: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKR+VEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKEL+EAMKA DVQKKWEDSSWGRKLLVK+RRA+LNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKSQS 134
           VRQEL+KLKKS S
Sbjct: 121 VRQELAKLKKSAS 133

[Close]
BLAST of Cucsa.255510 vs. TrEMBL
Match: Q9SXL9_CUCSA (Csf-1 protein (Fragment) OS=Cucumis sativus GN=Csf-1 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 3.1e-62
Identity = 121/133 (90.98%), Postives = 132/133 (99.25%), Query Frame = 1 

Query: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKR+VEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDM RSQMNFKRLSLTDIKI
Sbjct: 6   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 65

Query: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KKELIEAMKAGDVQKKWE+SSWGRKL+VKKRRA+LNDFDRFKLMLAKIKRAGL
Sbjct: 66  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 125

Query: 121 VRQELSKLKKSQS 134
           VRQEL+KLKK+++
Sbjct: 126 VRQELAKLKKAEA 138

[Close]
BLAST of Cucsa.255510 vs. TrEMBL
Match: A0A0A0LIH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G173070 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 3.1e-62
Identity = 121/133 (90.98%), Postives = 132/133 (99.25%), Query Frame = 1 

Query: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKR+VEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDM RSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KKELIEAMKAGDVQKKWE+SSWGRKL+VKKRRA+LNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKSQS 134
           VRQEL+KLKK+++
Sbjct: 121 VRQELAKLKKAEA 133

[Close]
BLAST of Cucsa.255510 vs. TrEMBL
Match: M5XHS7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013229mg PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.2e-59
Identity = 117/133 (87.97%), Postives = 128/133 (96.24%), Query Frame = 1 

Query: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KKEL+ AM+A DV+KKWE+SSWGRKL+V+KRRAALNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPKKKELLAAMEAADVKKKWENSSWGRKLIVQKRRAALNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKSQS 134
           VR EL+KLKK  +
Sbjct: 121 VRTELAKLKKESA 133

[Close]
BLAST of Cucsa.255510 vs. TAIR10
Match: AT2G20450.1 (AT2G20450.1 Ribosomal protein L14)

HSP 1 Score: 217.2 bits (552), Expect = 6.0e-57
Identity = 109/130 (83.85%), Postives = 119/130 (91.54%), Query Frame = 1 

Query: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           M FKRFVEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDM R QMN KRLSLTDI I
Sbjct: 1   MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 60

Query: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120
           DI RVP+KK LIEAM+  DV+ KWE SSWGRKL+V+KRRAALNDFDRFK+MLAKIKRAG+
Sbjct: 61  DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 120

Query: 121 VRQELSKLKK 131
           VRQEL+KLK+
Sbjct: 121 VRQELAKLKR 130

[Close]
BLAST of Cucsa.255510 vs. TAIR10
Match: AT4G27090.1 (AT4G27090.1 Ribosomal protein L14)

HSP 1 Score: 214.2 bits (544), Expect = 5.1e-56
Identity = 107/130 (82.31%), Postives = 119/130 (91.54%), Query Frame = 1 

Query: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           M FKR+VEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI I
Sbjct: 1   MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60

Query: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120
           DI RVP+KK LIEAM+  DV+ KWE SSWGRKL+V+KRRA LNDFDRFK+MLAKIK+AG+
Sbjct: 61  DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120

Query: 121 VRQELSKLKK 131
           VRQEL+KLKK
Sbjct: 121 VRQELAKLKK 130

[Close]
BLAST of Cucsa.255510 vs. NCBI nr
Match: gi|449432538|ref|XP_004134056.1| (PREDICTED: 60S ribosomal protein L14-1-like [Cucumis sativus])

HSP 1 Score: 259.6 bits (662), Expect = 3.0e-66
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKSQS 134
           VRQELSKLKKSQS
Sbjct: 121 VRQELSKLKKSQS 133

[Close]
BLAST of Cucsa.255510 vs. NCBI nr
Match: gi|659076099|ref|XP_008438500.1| (PREDICTED: 60S ribosomal protein L14-1-like [Cucumis melo])

HSP 1 Score: 259.6 bits (662), Expect = 3.0e-66
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 68  MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 127

Query: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL
Sbjct: 128 DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 187

Query: 121 VRQELSKLKKSQS 134
           VRQELSKLKKSQS
Sbjct: 188 VRQELSKLKKSQS 200

[Close]
BLAST of Cucsa.255510 vs. NCBI nr
Match: gi|449432536|ref|XP_004134055.1| (PREDICTED: 60S ribosomal protein L14-2-like [Cucumis sativus])

HSP 1 Score: 248.8 bits (634), Expect = 5.3e-63
Identity = 126/133 (94.74%), Postives = 131/133 (98.50%), Query Frame = 1 

Query: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKR+VEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKEL+EAMKA DVQKKWEDSSWGRKLLVK+RRA+LNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKSQS 134
           VRQEL+KLKKS S
Sbjct: 121 VRQELAKLKKSAS 133

[Close]
BLAST of Cucsa.255510 vs. NCBI nr
Match: gi|659076103|ref|XP_008438503.1| (PREDICTED: probable 60S ribosomal protein L14 [Cucumis melo])

HSP 1 Score: 247.3 bits (630), Expect = 1.5e-62
Identity = 125/133 (93.98%), Postives = 131/133 (98.50%), Query Frame = 1 

Query: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKR+VEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQ+NFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQINFKRLSLTDIKI 60

Query: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120
           DIKRVPRKKEL+EAMKA DVQKKWEDSSWGRKLLVK+RRA+LNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPRKKELMEAMKAADVQKKWEDSSWGRKLLVKQRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKSQS 134
           VRQEL+KLKKS S
Sbjct: 121 VRQELAKLKKSAS 133

[Close]
BLAST of Cucsa.255510 vs. NCBI nr
Match: gi|5762251|dbj|BAA83469.1| (Csf-1 [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 4.5e-62
Identity = 121/133 (90.98%), Postives = 132/133 (99.25%), Query Frame = 1 

Query: 1   MPFKRFVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMVRSQMNFKRLSLTDIKI 60
           MPFKR+VEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDM RSQMNFKRLSLTDIKI
Sbjct: 6   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 65

Query: 61  DIKRVPRKKELIEAMKAGDVQKKWEDSSWGRKLLVKKRRAALNDFDRFKLMLAKIKRAGL 120
           DIKRVP+KKELIEAMKAGDVQKKWE+SSWGRKL+VKKRRA+LNDFDRFKLMLAKIKRAGL
Sbjct: 66  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 125

Query: 121 VRQELSKLKKSQS 134
           VRQEL+KLKK+++
Sbjct: 126 VRQELAKLKKAEA 138

The following BLAST results are available for this feature:
BLAST of Cucsa.255510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL141_ARATH1.1e-5583.8560S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1[more]
RL14_PEA5.3e-5580.92Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1[more]
RL142_ARATH9.0e-5582.3160S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1[more]
RL14_LUMRU9.4e-2849.6260S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1[more]
RL14_GRIJA7.9e-2750.0060S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1[more]
BLAST of Cucsa.255510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L725_CUCSA2.1e-66100.00Csf-1 protein OS=Cucumis sativus GN=Csa_3G134920 PE=4 SV=1[more]
A0A0A0L4D3_CUCSA3.7e-6394.74Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134930 PE=4 SV=1[more]
Q9SXL9_CUCSA3.1e-6290.98Csf-1 protein (Fragment) OS=Cucumis sativus GN=Csf-1 PE=2 SV=1[more]
A0A0A0LIH9_CUCSA3.1e-6290.98Uncharacterized protein OS=Cucumis sativus GN=Csa_2G173070 PE=4 SV=1[more]
M5XHS7_PRUPE3.2e-5987.97Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013229mg PE=4 SV=1[more]
BLAST of Cucsa.255510 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G20450.16.0e-5783.85 Ribosomal protein L14[more]
AT4G27090.15.1e-5682.31 Ribosomal protein L14[more]
BLAST of Cucsa.255510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432538|ref|XP_004134056.1|3.0e-66100.00PREDICTED: 60S ribosomal protein L14-1-like [Cucumis sativus][more]
gi|659076099|ref|XP_008438500.1|3.0e-66100.00PREDICTED: 60S ribosomal protein L14-1-like [Cucumis melo][more]
gi|449432536|ref|XP_004134055.1|5.3e-6394.74PREDICTED: 60S ribosomal protein L14-2-like [Cucumis sativus][more]
gi|659076103|ref|XP_008438503.1|1.5e-6293.98PREDICTED: probable 60S ribosomal protein L14 [Cucumis melo][more]
gi|5762251|dbj|BAA83469.1|4.5e-6290.98Csf-1 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002784Ribosomal_L14e_dom
IPR008991Translation_prot_SH3-like_sf
IPR014722Rib_L2_dom2
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.255510.1Cucsa.255510.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002784Ribosomal protein L14e domainPFAMPF01929Ribosomal_L14ecoord: 45..117
score: 1.5
IPR008991Translation protein SH3-like domainunknownSSF50104Translation proteins SH3-like domaincoord: 5..93
score: 3.61
IPR014722Ribosomal protein L2 domain 2GENE3DG3DSA:2.30.30.30coord: 4..85
score: 2.0
NoneNo IPR availablePANTHERPTHR1112760S RIBOSOMAL PROTEIN L14coord: 2..130
score: 6.2
NoneNo IPR availablePANTHERPTHR11127:SF3SUBFAMILY NOT NAMEDcoord: 2..130
score: 6.2

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.255510Watermelon (97103) v2cgywmbB452
Cucsa.255510Watermelon (97103) v2cgywmbB453
Cucsa.255510Watermelon (97103) v2cgywmbB456
Cucsa.255510Wax gourdcgywgoB525
Cucsa.255510Wax gourdcgywgoB510
Cucsa.255510Wax gourdcgywgoB528
Cucsa.255510Cucumber (Gy14) v1cgycgyB133
Cucsa.255510Cucurbita maxima (Rimu)cgycmaB0709
Cucsa.255510Cucurbita maxima (Rimu)cgycmaB0715
Cucsa.255510Cucurbita maxima (Rimu)cgycmaB0717
Cucsa.255510Cucurbita maxima (Rimu)cgycmaB0719
Cucsa.255510Cucurbita maxima (Rimu)cgycmaB0727
Cucsa.255510Cucurbita maxima (Rimu)cgycmaB0732
Cucsa.255510Cucurbita moschata (Rifu)cgycmoB0700
Cucsa.255510Cucurbita moschata (Rifu)cgycmoB0708
Cucsa.255510Cucurbita moschata (Rifu)cgycmoB0710
Cucsa.255510Cucurbita moschata (Rifu)cgycmoB0713
Cucsa.255510Cucurbita moschata (Rifu)cgycmoB0718
Cucsa.255510Cucurbita moschata (Rifu)cgycmoB0721
Cucsa.255510Wild cucumber (PI 183967)cgycpiB383
Cucsa.255510Wild cucumber (PI 183967)cgycpiB378
Cucsa.255510Cucumber (Chinese Long) v2cgycuB362
Cucsa.255510Cucumber (Chinese Long) v2cgycuB366
Cucsa.255510Melon (DHL92) v3.5.1cgymeB433
Cucsa.255510Melon (DHL92) v3.5.1cgymeB434
Cucsa.255510Melon (DHL92) v3.5.1cgymeB439
Cucsa.255510Watermelon (Charleston Gray)cgywcgB451
Cucsa.255510Watermelon (Charleston Gray)cgywcgB452
Cucsa.255510Watermelon (Charleston Gray)cgywcgB457
Cucsa.255510Watermelon (97103) v1cgywmB475
Cucsa.255510Watermelon (97103) v1cgywmB479
Cucsa.255510Watermelon (97103) v1cgywmB483
Cucsa.255510Cucurbita pepo (Zucchini)cgycpeB0670
Cucsa.255510Cucurbita pepo (Zucchini)cgycpeB0675
Cucsa.255510Cucurbita pepo (Zucchini)cgycpeB0682
Cucsa.255510Cucurbita pepo (Zucchini)cgycpeB0683
Cucsa.255510Cucurbita pepo (Zucchini)cgycpeB0687
Cucsa.255510Bottle gourd (USVL1VR-Ls)cgylsiB412
Cucsa.255510Bottle gourd (USVL1VR-Ls)cgylsiB415
Cucsa.255510Bottle gourd (USVL1VR-Ls)cgylsiB417
Cucsa.255510Melon (DHL92) v3.6.1cgymedB428
Cucsa.255510Melon (DHL92) v3.6.1cgymedB429
Cucsa.255510Melon (DHL92) v3.6.1cgymedB432
Cucsa.255510Silver-seed gourdcarcgyB1077
Cucsa.255510Silver-seed gourdcarcgyB0269
Cucsa.255510Silver-seed gourdcarcgyB0276
Cucsa.255510Silver-seed gourdcarcgyB0847
Cucsa.255510Silver-seed gourdcarcgyB0887
Cucsa.255510Silver-seed gourdcarcgyB1190
Cucsa.255510Cucumber (Chinese Long) v3cgycucB384
Cucsa.255510Cucumber (Chinese Long) v3cgycucB387
Cucsa.255510Cucumber (Chinese Long) v3cgycucB389