Cucsa.253670 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.253670
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionDead box ATP-dependent RNA helicase, putative
Locationscaffold02229 : 2214343 .. 2216596 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACTGGGGACTCTGCTCCCCCTTCCCTTGGTCCTCGCTATGCACCAGATGACCCTACTCTTCCGAAACCTTGGAAGGGATTGATTGATGGGAGCACTGGACTATCATACTACTGGAACCCTGAAACCAACGTTACTCAGTATGAGAAGCCAGTCTCTTTGCCACCACCATTACCGCTTGGTCCTCATCCTGGCGTTTCTATTTCCAAGCCTACTTCGATTCCGGAGGCTCATTCAATGCCATCAAGTGGCACAGTGGCACCTCATGTACAACAAAATCATTACAACATCCCTCAACAAGATGGCCAATTAAACAACCAGCTTTCTCAACAACCTGGACATCTGATCTCACAGCAGCACAGTTCTGTTGCCAGTCAGGTAGCTGTTAATCACCATCCTGGCATGCAAATGGCTCCAGATGGGCGACAGCATGGCTCGCAATCGAACCAAGTCATGCAGCAGCAGGGGGTGTTTGGAATGTCATCACAACATATTGGCCAACAGCAGGTCATGCATCAAGGTCAGAACATGGCTCATGCAAATCAACAAATGTCTCAACATCCTAACCAGCAACCCCTGCAGAATCCAGGACAAGCCTTACAGAATCCGGGGCAACAAATGCCACAACCATCGGTCCAGCATTTAGGACAGCCAAACATGCATAATCCGAAGCCATTAGTTGGGCAGCCTCAAGGTCCACAATATGGTCAGCAGCAGCTTCAATATATCGGTTATCAGCAAAGCCTACATCCAAACGTGCAGCAAAATTCACAGCAGCAAGTTCAACAAAGTCCTTTAGTCCAGCCATTTGGCAATCACCTCGAGCAGAAGCCGGCTTTTCTGAAGAGAGAGGAGGAGAATATCCAGTCAGGAAACCAAGTTGGATTTTCTTCTTCCCAGTTTCAACAAAGTGGTGGTACCCCATCCATTCATAACCTACATTCGGGAACAAATTCTTCTCAAATGCAACCATTGGGTTTAGCATCAGATCAAGCACGGCAATTTGGTAGCTCTCCGGGAAACATGCAACAGCAACTCCCTGTGGGTCAAGTGCAGCATGCAGGCACTGAATTGACTCACCGCCATCATCATTCTAGATTCCAAGATCAAATGGGCCCAGCTGTGATTCCGGGGCAGCAACCTGTTGCTGAAAATTTGCCAGGCAGAGGTGGAAATGAATATTACTTTGGCAGGAATGAGGGGTCTGGCCCCGGTCCACATCAGCCAAGGCTTGCAGCAATACCAATGGCAAGGAGCCAGCAGGTTCTTCATTACATGTCTATTTGTAATTCTTCCATCTCCTTAAAAAAATATTGTTTAAGTAAGGTACACCATGACGGATGATTAATTTACTATGAAAAAAACCACACATATCTTAAGATTGTTGCATCATTGCATGTTAAATAAGGTTGATTGGGCACTGCAAAGTTTTATTGGTAAGGTTATACGTGGATGATTAATAGAGAAATTGATAGGAAATAGCATGTTAGGTACTCTTCCTTGACCATAACTTAGTTTTAGGTTAGGTGAGATGTCTTCTTTCTAACTATTATATGGGAAAGTAATACTTTCATTAAAAATGTTAAACAATACTACTAGCCAGGTTGAGCAACATGTCGTCTGAAGTTTTCAAGTATTTTAGTTCTGTTCTGTATGATTTATGTTTTCTTGAATTATCCTTGCTTTCAGGACTCAAGGATGAGTGGTGCCCCATTTCCAAGTGCAGCACCCGGTCATCCTAGTGGGACAAAGTTCGCAGGTGGTCCCACACATAATTTGTACAACCATGGATCTGGTGGTTCATCATTGCCGAATAATGCATTGATGGGGCCTCCTCATGTTGGAGCTTCAGATGTTACTAATATGTCACCTGTTGAAGTTTATCGTCGACAGCATGAAGTAACTGCAACGGTTTGTATTTCAGCATGCCTATCTTTTCCAATTGTGTTGGTTCTGTGAATGCTATCGGGGTTCTAATTGTATCTTTGTGTGGGAAAATCAGTGTGTGGTTGTCGAGGTTTATATATGTATTTTAATGGAAGTTGATGCATCCCATATTGAAATTTGAATGCAATGTGCAACTGACTCTATTTAATTAGATGTGCACTGTTGCTTAAATTTAAAGTTGTTAAACTACTATTTTTTGGTTGCAAATGATCAGTTCAATTAACTTTGTAGGGTGATAATGTTCCAGCTCCATTCATGACATTCGAGGCTACTGGCTTTCCTCCGGAGATACTGAGAGAGGCAA

mRNA sequence

ATGGAAACTGGGGACTCTGCTCCCCCTTCCCTTGGTCCTCGCTATGCACCAGATGACCCTACTCTTCCGAAACCTTGGAAGGGATTGATTGATGGGAGCACTGGACTATCATACTACTGGAACCCTGAAACCAACGTTACTCAGTATGAGAAGCCAGTCTCTTTGCCACCACCATTACCGCTTGGTCCTCATCCTGGCGTTTCTATTTCCAAGCCTACTTCGATTCCGGAGGCTCATTCAATGCCATCAAGTGGCACAGTGGCACCTCATGTACAACAAAATCATTACAACATCCCTCAACAAGATGGCCAATTAAACAACCAGCTTTCTCAACAACCTGGACATCTGATCTCACAGCAGCACAGTTCTGTTGCCAGTCAGGTAGCTGTTAATCACCATCCTGGCATGCAAATGGCTCCAGATGGGCGACAGCATGGCTCGCAATCGAACCAAGTCATGCAGCAGCAGGGGGTGTTTGGAATGTCATCACAACATATTGGCCAACAGCAGGTCATGCATCAAGGTCAGAACATGGCTCATGCAAATCAACAAATGTCTCAACATCCTAACCAGCAACCCCTGCAGAATCCAGGACAAGCCTTACAGAATCCGGGGCAACAAATGCCACAACCATCGGTCCAGCATTTAGGACAGCCAAACATGCATAATCCGAAGCCATTAGTTGGGCAGCCTCAAGGTCCACAATATGGTCAGCAGCAGCTTCAATATATCGGTTATCAGCAAAGCCTACATCCAAACGTGCAGCAAAATTCACAGCAGCAAGTTCAACAAAGTCCTTTAGTCCAGCCATTTGGCAATCACCTCGAGCAGAAGCCGGCTTTTCTGAAGAGAGAGGAGGAGAATATCCAGTCAGGAAACCAAGTTGGATTTTCTTCTTCCCAGTTTCAACAAAGTGGTGGTACCCCATCCATTCATAACCTACATTCGGGAACAAATTCTTCTCAAATGCAACCATTGGGTTTAGCATCAGATCAAGCACGGCAATTTGGTAGCTCTCCGGGAAACATGCAACAGCAACTCCCTGTGGGTCAAGTGCAGCATGCAGGCACTGAATTGACTCACCGCCATCATCATTCTAGATTCCAAGATCAAATGGGCCCAGCTGTGATTCCGGGGATGAGTGGTGCCCCATTTCCAAGTGCAGCACCCGGTCATCCTAGTGGGACAAAGTTCGCAGGTGGTCCCACACATAATTTGTACAACCATGGATCTGGTGGTTCATCATTGCCGAATAATGCATTGATGGGGCCTCCTCATGTTGGAGCTTCAGATGTTACTAATATGTCACCTGTTGAAGTTTATCGTCGACAGCATGAAGTAACTGCAACGGGTGATAATGTTCCAGCTCCATTCATGACATTCGAGGCTACTGGCTTTCCTCCGGAGATACTGAGAGAGGCAA

Coding sequence (CDS)

ATGGAAACTGGGGACTCTGCTCCCCCTTCCCTTGGTCCTCGCTATGCACCAGATGACCCTACTCTTCCGAAACCTTGGAAGGGATTGATTGATGGGAGCACTGGACTATCATACTACTGGAACCCTGAAACCAACGTTACTCAGTATGAGAAGCCAGTCTCTTTGCCACCACCATTACCGCTTGGTCCTCATCCTGGCGTTTCTATTTCCAAGCCTACTTCGATTCCGGAGGCTCATTCAATGCCATCAAGTGGCACAGTGGCACCTCATGTACAACAAAATCATTACAACATCCCTCAACAAGATGGCCAATTAAACAACCAGCTTTCTCAACAACCTGGACATCTGATCTCACAGCAGCACAGTTCTGTTGCCAGTCAGGTAGCTGTTAATCACCATCCTGGCATGCAAATGGCTCCAGATGGGCGACAGCATGGCTCGCAATCGAACCAAGTCATGCAGCAGCAGGGGGTGTTTGGAATGTCATCACAACATATTGGCCAACAGCAGGTCATGCATCAAGGTCAGAACATGGCTCATGCAAATCAACAAATGTCTCAACATCCTAACCAGCAACCCCTGCAGAATCCAGGACAAGCCTTACAGAATCCGGGGCAACAAATGCCACAACCATCGGTCCAGCATTTAGGACAGCCAAACATGCATAATCCGAAGCCATTAGTTGGGCAGCCTCAAGGTCCACAATATGGTCAGCAGCAGCTTCAATATATCGGTTATCAGCAAAGCCTACATCCAAACGTGCAGCAAAATTCACAGCAGCAAGTTCAACAAAGTCCTTTAGTCCAGCCATTTGGCAATCACCTCGAGCAGAAGCCGGCTTTTCTGAAGAGAGAGGAGGAGAATATCCAGTCAGGAAACCAAGTTGGATTTTCTTCTTCCCAGTTTCAACAAAGTGGTGGTACCCCATCCATTCATAACCTACATTCGGGAACAAATTCTTCTCAAATGCAACCATTGGGTTTAGCATCAGATCAAGCACGGCAATTTGGTAGCTCTCCGGGAAACATGCAACAGCAACTCCCTGTGGGTCAAGTGCAGCATGCAGGCACTGAATTGACTCACCGCCATCATCATTCTAGATTCCAAGATCAAATGGGCCCAGCTGTGATTCCGGGGATGAGTGGTGCCCCATTTCCAAGTGCAGCACCCGGTCATCCTAGTGGGACAAAGTTCGCAGGTGGTCCCACACATAATTTGTACAACCATGGATCTGGTGGTTCATCATTGCCGAATAATGCATTGATGGGGCCTCCTCATGTTGGAGCTTCAGATGTTACTAATATGTCACCTGTTGAAGTTTATCGTCGACAGCATGAAGTAACTGCAACGGGTGATAATGTTCCAGCTCCATTCATGACATTCGAGGCTACTGGCTTTCCTCCGGAGATACTGAGAGAGGCAA

Protein sequence

METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLPLGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQQPGHLISQQHSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAHANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQLQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSSQFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQHAGTELTHRHHHSRFQDQMGPAVIPGMSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSGGSSLPNNALMGPPHVGASDVTNMSPVEVYRRQHEVTATGDNVPAPFMTFEATGFPPEILREAX
Homology
[Close]
BLAST of Cucsa.253670 vs. Swiss-Prot
Match: RH40_ARATH (DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis thaliana GN=RH40 PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.9e-52
Identity = 169/504 (33.53%), Postives = 220/504 (43.65%), Query Frame = 1 

Query: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP 60
           M T +  P S GPRYAP+DPTLP+PWKGLIDGSTG+ YYWNPETNVTQYE+P S PPP  
Sbjct: 1   MATTEDTPASAGPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNVTQYERP-SAPPPHS 60

Query: 61  LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQ------LSQQPG 120
                   I  P+S     +         HV Q H    QQ  Q  +Q      + Q P 
Sbjct: 61  ATTPKLAQIPVPSSGQGHQAQHEQAKPVGHVSQQH-GFQQQPQQFPSQHVRPQMMQQHPA 120

Query: 121 HLISQQHSSVASQVAVNHHPGMQMAPDGRQHGS-QSNQVMQQQGVFGMSSQHIGQ-QQVM 180
             + QQ      Q          M P    H S Q+ Q   QQ   GM +QH    QQ+ 
Sbjct: 121 QQMPQQSGQQFPQ-----QQSQSMVPHPHGHPSVQTYQPTTQQQQQGMQNQHSQMPQQLS 180

Query: 181 HQGQNMAHANQQ-MSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQP 240
           HQ    AH+ Q  M   P+ Q      Q LQN   Q PQ        P+      L  + 
Sbjct: 181 HQ---YAHSQQHYMGFRPHMQT-----QGLQN-SHQTPQGGPHGQQFPSQQEYNSLAPKR 240

Query: 241 QGPQYGQQQLQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQS 300
           +G ++   +    G+ Q   PN +++  Q             H E   A  K       +
Sbjct: 241 EGDEFHGGKKT--GFSQPHLPNSERSPSQNT-----------HFEANAASQKTNANLAMA 300

Query: 301 ----GNQVGFSSSQFQQSGGT-------PSIHNLHSGT---NSSQMQPLGLASDQARQFG 360
               G Q   + +QFQQ G         P   N    T     S + P    +       
Sbjct: 301 QKCNGPQANAAVTQFQQPGANLIHQQLGPRAPNQMDQTMLHQKSHVSPFQSNNTYENNLQ 360

Query: 361 SSPGN-----MQQQLPVGQVQHAGTELTHRHHHSRFQDQMGPAVIPG---MSGAPFPSAA 420
           S PGN     M+ ++PV   Q                  + PA +P    +SG P  +A 
Sbjct: 361 SRPGNDSYVNMRMEVPVRGAQ-----------------PLHPAAMPKDIRISGGPPTNAD 420

Query: 421 PGHPSGTKFAGGPTHNLYNHGSGGSSLPNNALMGPPHVGASDVTNMSPVEVYRRQHEVTA 474
           P         G   H  Y H   G + PN +L+ P  V + DV ++SPVE+YR+QHEVT 
Sbjct: 421 PA-------MGQTGHGTYGHA--GPAFPNKSLVRPHFVTSPDVPHLSPVEIYRKQHEVTT 449

[Close]
BLAST of Cucsa.253670 vs. Swiss-Prot
Match: RH40_ORYSJ (DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica GN=Os01g0549400 PE=2 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 5.7e-19
Identity = 41/57 (71.93%), Postives = 47/57 (82.46%), Query Frame = 1 

Query: 13 PRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPV----SLPPPLPLGPHP 66
          PRYAPDDP+LPKPW+GL+DG+TG  YYWNPETN+TQYEKP+     LPPP PL P P
Sbjct: 10 PRYAPDDPSLPKPWRGLVDGTTGYLYYWNPETNITQYEKPLPPEDQLPPPPPLPPPP 66


HSP 2 Score: 56.2 bits (134), Expect = 1.1e-06
Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 1 

Query: 439 EVYRRQHEVTATGDNVPAPFMTFEATGFPPEILRE 474
           E YR +HE+T  GDNVPAP  +FE  GFPPEIL+E
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKE 164

[Close]
BLAST of Cucsa.253670 vs. Swiss-Prot
Match: RH14_ORYSJ (DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica GN=Os01g0172200 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 4.5e-16
Identity = 39/80 (48.75%), Postives = 50/80 (62.50%), Query Frame = 1 

Query: 6  SAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLPLGPHP 65
          +A  + GPRYAP DPTLPKPW+GLIDG+TG  Y+WNPET   QY++P + PP  P    P
Sbjct: 7  AAATARGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKAVQYDRPTAPPPSSPPAQQP 66

Query: 66 GVSISKPTSIPEAHSMPSSG 86
               +P +   A S   +G
Sbjct: 67 P---ERPRNSDPAESQAQAG 83


HSP 2 Score: 58.9 bits (141), Expect = 1.7e-07
Identity = 24/35 (68.57%), Postives = 29/35 (82.86%), Query Frame = 1 

Query: 439 EVYRRQHEVTATGDNVPAPFMTFEATGFPPEILRE 474
           E YR +HE+T  G+  PAPFMTF++TGFPPEILRE
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILRE 194

[Close]
BLAST of Cucsa.253670 vs. Swiss-Prot
Match: DB10_NICSY (ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.2e-15
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 1 

Query: 10 SLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPV 54
          S GP YAP+DPTLPKPWKGL+DG+TG  Y+WNPETN TQYE+PV
Sbjct: 8  SAGPSYAPEDPTLPKPWKGLVDGTTGFIYFWNPETNDTQYERPV 51


HSP 2 Score: 48.5 bits (114), Expect = 2.3e-04
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 1 

Query: 439 EVYRRQHEVTATGDNVPAPFMTFEATGFPPEILRE 474
           E Y R++E++ TG +VPAP  +FEATGFP EI+RE
Sbjct: 125 ESYCRRNEISVTGGDVPAPLTSFEATGFPSEIVRE 159

[Close]
BLAST of Cucsa.253670 vs. Swiss-Prot
Match: RH14_ARATH (DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana GN=RH14 PE=1 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 6.5e-15
Identity = 39/64 (60.94%), Postives = 44/64 (68.75%), Query Frame = 1 

Query: 14 RYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLPLGPHPGVSISKPT 73
          RYAP+D TLPKPWKGLID  TG  Y+WNPETNVTQYEKP    P LP    P VS+S   
Sbjct: 11 RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPT---PSLPPKFSPAVSVSSSV 70

Query: 74 SIPE 78
           + +
Sbjct: 71 QVQQ 71


HSP 2 Score: 61.2 bits (147), Expect = 3.5e-08
Identity = 39/109 (35.78%), Postives = 55/109 (50.46%), Query Frame = 1 

Query: 365 HSRFQDQMGPAVIPGMSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSGGSSLPNNALMGP 424
           +SR  +++      G SG P+ + A         A G   + Y   S    LP++A    
Sbjct: 84  YSRGSERVSRFSEGGRSGPPYSNGA---------ANGVGDSAYGAASTRVPLPSSA---- 143

Query: 425 PHVGASDVTNMSPVEVYRRQHEVTATGDNVPAPFMTFEATGFPPEILRE 474
                   + +SP E Y R+HE+T +G  VP P M+FEATGFPPE+LRE
Sbjct: 144 ------PASELSP-EAYSRRHEITVSGGQVPPPLMSFEATGFPPELLRE 172

[Close]
BLAST of Cucsa.253670 vs. TrEMBL
Match: A0A0A0L544_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G151370 PE=4 SV=1)

HSP 1 Score: 792.3 bits (2045), Expect = 3.2e-226
Identity = 385/412 (93.45%), Postives = 386/412 (93.69%), Query Frame = 1 

Query: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP 60
           METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 42  METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP 101

Query: 61  LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQQPGHLISQQ 120
           LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQ  GHLISQQ
Sbjct: 102 LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQHTGHLISQQ 161

Query: 121 HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH 180
           HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH
Sbjct: 162 HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH 221

Query: 181 ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQ 240
           ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQ
Sbjct: 222 ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQ 281

Query: 241 LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSS 300
           LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSS
Sbjct: 282 LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSS 341

Query: 301 QFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQHAGTELT 360
           QFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQHAGTELT
Sbjct: 342 QFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQHAGTELT 401

Query: 361 HRHHHSRFQDQMGPAVIPGMSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSG 413
           HRHHHSRFQDQMGPAVIPG    P     PG      + G       N GSG
Sbjct: 402 HRHHHSRFQDQMGPAVIPGQQ--PVAENLPGRGGNEYYFG------RNEGSG 445

[Close]
BLAST of Cucsa.253670 vs. TrEMBL
Match: A0A0A0L544_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G151370 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 9.6e-58
Identity = 172/413 (41.65%), Postives = 192/413 (46.49%), Query Frame = 1 

Query: 85  GTVAPHV-QQNHYNIPQQDGQLNNQLSQQPGHLISQQHSSVASQVAVNHHPGMQMAPDGR 144
           G  + H+ QQ   +  Q     N Q+SQ P    +QQ      Q   N  PG QM     
Sbjct: 201 GMSSQHIGQQQVMHQGQNMAHANQQMSQHP----NQQPLQNPGQALQN--PGQQMPQPSV 260

Query: 145 QHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAHANQQMSQHPNQQPLQNPGQALQN 204
           QH  Q N    +  V        GQQQ+ + G        Q S HPN Q         QN
Sbjct: 261 QHLGQPNMHNPKPLVGQPQGPQYGQQQLQYIGY-------QQSLHPNVQ---------QN 320

Query: 205 PGQQMPQ-PSVQHLGQPNMHNPKPLVGQPQGPQYGQQ------QLQYIGYQQSLHPNVQQ 264
             QQ+ Q P VQ  G      P  L  + +  Q G Q      Q Q  G   S+H     
Sbjct: 321 SQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSSQFQQSGGTPSIHNLHSG 380

Query: 265 NSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSSQFQQSGGTPSIHNLHS 324
            +  Q+Q   L           P        N+Q    VG       Q  GT   H  H 
Sbjct: 381 TNSSQMQPLGLASDQARQFGSSPG-------NMQQQLPVGQV-----QHAGTELTHRHHH 440

Query: 325 GTNSSQMQPLGLASDQ----------------ARQFGSSPGNMQQQLPVGQVQHAGTELT 384
                QM P  +   Q                 R  GS PG  Q +L       A   + 
Sbjct: 441 SRFQDQMGPAVIPGQQPVAENLPGRGGNEYYFGRNEGSGPGPHQPRL-------AAIPMA 500

Query: 385 HRHHHSRFQDQMGPAVIPGMSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSGGSSLPNNA 444
                SR            MSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSGGSSLPNNA
Sbjct: 501 RSQQDSR------------MSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSGGSSLPNNA 560

Query: 445 LMGPPHVGASDVTNMSPVEVYRRQHEVTATGDNVPAPFMTFEATGFPPEILRE 474
           LMGPPHVGASDVTNMSPVEVYR+QHEVTA+GDNVPAPFMTFEATGFPPEILRE
Sbjct: 561 LMGPPHVGASDVTNMSPVEVYRQQHEVTASGDNVPAPFMTFEATGFPPEILRE 560


HSP 2 Score: 658.3 bits (1697), Expect = 7.1e-186
Identity = 324/379 (85.49%), Postives = 338/379 (89.18%), Query Frame = 1 

Query: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP 60
           METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGS+GL YYWNPETNVTQYEKPVSLPPPLP
Sbjct: 90  METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSSGLLYYWNPETNVTQYEKPVSLPPPLP 149

Query: 61  LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQQPGHLISQQ 120
            GPH GVS SKPTSI E HSM S+GT+APHVQQNH+ + Q DGQ+NNQLSQQPGHLISQQ
Sbjct: 150 HGPHHGVSTSKPTSILEPHSMVSNGTLAPHVQQNHHALTQ-DGQVNNQLSQQPGHLISQQ 209

Query: 121 HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH 180
           H+SV  QVAVNHHPGMQMAPDGRQH SQSNQVMQQQGVF MSSQHIG QQV HQGQ M H
Sbjct: 210 HNSVTGQVAVNHHPGMQMAPDGRQHSSQSNQVMQQQGVFAMSSQHIGHQQV-HQGQKMVH 269

Query: 181 ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQ 240
           ANQQMSQHPN QP QNPGQALQNPGQQMPQPSVQHLG PN+ NP PLVGQPQGPQY QQQ
Sbjct: 270 ANQQMSQHPNIQPPQNPGQALQNPGQQMPQPSVQHLGHPNIQNPTPLVGQPQGPQYCQQQ 329

Query: 241 LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSS 300
            QYI YQQ++  NVQQNSQQQVQQSPL  PFGNHLEQKPAFLKR EENIQSGNQVG+SSS
Sbjct: 330 AQYISYQQNIPSNVQQNSQQQVQQSPLGMPFGNHLEQKPAFLKR-EENIQSGNQVGYSSS 389

Query: 301 QFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQHAGTELT 360
           Q QQSGGT SIHNLHSGTNSSQMQ  GLASDQARQFGSSP NMQQQ PV Q+Q+AG E T
Sbjct: 390 QLQQSGGTSSIHNLHSGTNSSQMQQFGLASDQARQFGSSPRNMQQQHPVVQLQNAGVEST 449

Query: 361 HRHHHSRFQDQMGPAVIPG 380
           HRHHHSRFQDQMGPAV+ G
Sbjct: 450 HRHHHSRFQDQMGPAVMQG 465

[Close]
BLAST of Cucsa.253670 vs. TrEMBL
Match: A0A0A0LAH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G151380 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 6.5e-46
Identity = 150/428 (35.05%), Postives = 194/428 (45.33%), Query Frame = 1 

Query: 64  HPGVSIS---KPTSIPEAHSMPSSGTVA---PHVQQNHYNIPQQDGQLNNQLSQQPGHLI 123
           HPG+ ++   +  S      M   G  A    H+     +  Q+    N Q+SQ P ++ 
Sbjct: 221 HPGMQMAPDGRQHSSQSNQVMQQQGVFAMSSQHIGHQQVHQGQKMVHANQQMSQHP-NIQ 280

Query: 124 SQQHSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQN 183
             Q+   A Q     +PG QM     QH    N     Q    +  Q  G Q    Q Q 
Sbjct: 281 PPQNPGQALQ-----NPGQQMPQPSVQHLGHPNI----QNPTPLVGQPQGPQYCQQQAQY 340

Query: 184 MAHANQ---QMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQ-PNMHNPKPLVGQPQG 243
           +++       + Q+  QQ  Q+P          +  P   HL Q P     +  +     
Sbjct: 341 ISYQQNIPSNVQQNSQQQVQQSP----------LGMPFGNHLEQKPAFLKREENIQSGNQ 400

Query: 244 PQYGQQQLQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGN 303
             Y   QLQ  G   S+H      +  Q+QQ  L           P  ++++   +Q   
Sbjct: 401 VGYSSSQLQQSGGTSSIHNLHSGTNSSQMQQFGLASDQARQFGSSPRNMQQQHPVVQL-- 460

Query: 304 QVGFSSSQFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQ 363
                     Q+ G  S H  H      QM P  +   QA    + PG +  +   G+ +
Sbjct: 461 ----------QNAGVESTHRHHHSRFQDQMGPAVMQGQQAGA-ENLPGRVGNEYYFGRNE 520

Query: 364 HAGTELTHRHHHSRFQDQMGPAVIP--------GMSGAPFPSAAPGHPSGTKFAGGPTHN 423
             G       H  R       A IP         MS  PFP+AAPGHPSGT F+  PTHN
Sbjct: 521 GPGIG----PHQPRL------AAIPMARSQQDTRMSAVPFPTAAPGHPSGTNFSAVPTHN 580

Query: 424 LYNHGSGGSSLPNNALMGPPHVGASDVTNMSPVEVYRRQHEVTATGDNVPAPFMTFEATG 474
           LY+HGSGG +L NN LMGP H+GASDVTNMSPVEVYR+QHEVTA+GDNVPAPFMTFEATG
Sbjct: 581 LYSHGSGGPTLSNN-LMGPTHIGASDVTNMSPVEVYRQQHEVTASGDNVPAPFMTFEATG 604


HSP 2 Score: 310.5 bits (794), Expect = 3.6e-81
Identity = 206/496 (41.53%), Postives = 257/496 (51.81%), Query Frame = 1 

Query: 12  GPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLPLGPHPGVSISK 71
           GPRYAPDDPTLP PWKGLIDGSTGL YYWNPETN+TQYEKP SLPPPLP GP P  +  K
Sbjct: 8   GPRYAPDDPTLPNPWKGLIDGSTGLLYYWNPETNITQYEKPASLPPPLPPGPPPATTTPK 67

Query: 72  PTSIPEAHSMPSSGTVA---PHVQQNHYNIPQQDGQLNNQLSQQPGHLISQQHSSVASQV 131
             + P  HSMP +G V+   P + Q     PQQ G    Q SQQ GHL++QQ + + +  
Sbjct: 68  LAATPVPHSMPPNGVVSQDGPQITQ----APQQQGTQVGQFSQQHGHLMTQQMNPLVTSF 127

Query: 132 AVNHHPGMQMAPDGRQHGSQSNQVMQQQGVF--------GMSSQHIGQQQVMHQGQNMAH 191
           A       Q+A  G+Q GSQ  Q MQ+ G            +  H GQQ    QG  MA 
Sbjct: 128 AQQ-----QVAQAGQQQGSQLGQAMQKHGQMMQHPSQQMPQAQVHQGQQTPQSQGSQMAQ 187

Query: 192 ANQQMSQHPNQQPLQNP-GQALQNPGQQMPQPSVQHL--GQP--NMHNPKPLVGQPQGPQ 251
           A  Q+ Q  +QQ    P  Q++   GQQ  Q    H   GQP  N    K    Q +   
Sbjct: 188 A--QVHQFAHQQLHYTPYQQSIPPQGQQSSQQQTLHSAQGQPLANQQEYKATFHQREDDD 247

Query: 252 YGQQQLQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQV 311
           +  QQ   +G+  S       +S Q +       P G +  Q P       +  Q G  +
Sbjct: 248 F--QQRNQVGFSPSRFQPAGASSVQNL-------PTGTNSIQMPQRAVHLGQPQQFGGPL 307

Query: 312 GF----SSSQFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQ 371
           G     SS    Q  GT  +H+ H     SQM P  + S Q+    + P  ++       
Sbjct: 308 GSMQHPSSFGHLQQPGTDLVHHQHGSRFQSQMDPAMIHSQQSN---APPVGLRMGHENNF 367

Query: 372 VQHAGTELTHRHHHSRFQDQMGP-----AVIP--------GMSGAPFPSAAPGHPSGTK- 431
               G +    + +S  +   GP     A IP         MSG PF +A PGH S    
Sbjct: 368 HGRGGNDY---YFNSNNEGPTGPQQPKLAAIPVARSQQEMSMSGGPFQNATPGHASALNT 427

Query: 432 FAGGPTHNLYNHGSGGSSLPNNALMGPPHVGASDVTNMSPVEVYRRQHEVTATGDNVPAP 474
            AG   HNLY+H +GG   PNN+L+  P+VG++ VT+++PVEVYR+QHEVTATGDNVPAP
Sbjct: 428 MAGHSVHNLYSHATGGPPFPNNSLVKSPYVGSTSVTSLTPVEVYRQQHEVTATGDNVPAP 477

[Close]
BLAST of Cucsa.253670 vs. TrEMBL
Match: W9R868_9ROSA (DEAD-box ATP-dependent RNA helicase 40 OS=Morus notabilis GN=L484_026135 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.2e-78
Identity = 192/451 (42.57%), Postives = 245/451 (54.32%), Query Frame = 1 

Query: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP 60
           M   + A  SLGPRYAP+DPTLPKPWKGLIDGSTG+ YYWNPETNVTQYEKP SLPP LP
Sbjct: 1   MAATEPAAASLGPRYAPEDPTLPKPWKGLIDGSTGVLYYWNPETNVTQYEKPASLPPSLP 60

Query: 61  LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQQPGHLISQQ 120
            GP P VS  K   IP AHS+P +  +A + QQ    +PQQ GQ  N    Q GHL+ QQ
Sbjct: 61  SGPPPAVSTPKLAPIPGAHSVPPNDVLAQNGQQ-VTQVPQQQGQQGN----QHGHLMLQQ 120

Query: 121 HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH 180
            +              Q+ P  +QHG                       QV   GQ M H
Sbjct: 121 QNP-------------QLGPAMQQHG-----------------------QVQQLGQIMQH 180

Query: 181 ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQ 240
             QQM Q   Q P Q+  Q LQ PGQQ+PQ  +  + Q    N    +  PQG Q   QQ
Sbjct: 181 PAQQMIQ---QIPQQSGQQGLQQPGQQIPQQVIHQMQQQTPPNQGLQMALPQGQQLTHQQ 240

Query: 241 LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSS 300
           LQY+ YQQS+ P  QQ + Q  QQ   V  F N  + KP F KREE+++Q+ NQ+GFS S
Sbjct: 241 LQYMAYQQSVLPQGQQITPQPTQQGVQVPQFVNQQDFKPGFPKREEDDLQNRNQIGFSPS 300

Query: 301 QFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQHAGTELT 360
           QFQQ+GG+ +  NL +GT S+ +  +G  S Q++QFGSS  NMQQ     ++Q  GT+L 
Sbjct: 301 QFQQAGGS-AAQNLAAGTTSAHILQIGAHSGQSQQFGSSVHNMQQPGSTTRLQPMGTDLA 360

Query: 361 HRHHHSRFQDQMGPAVIPGMSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSGGSSLPNNA 420
           H  H SRFQ++  P ++         + APG   G + AG   H    HG GG++   N+
Sbjct: 361 HHSHGSRFQNERDPILMHNHQS----NMAPG---GLR-AG---HESNFHGRGGNNYAFNS 394

Query: 421 LMGPPHVGASDVTNMSPVEVYRRQHEVTATG 452
               P  G      ++ + V R Q ++  +G
Sbjct: 421 NKETPIPGPQQ-PKLAAIPVARSQQDMRFSG 394

[Close]
BLAST of Cucsa.253670 vs. TrEMBL
Match: W9R868_9ROSA (DEAD-box ATP-dependent RNA helicase 40 OS=Morus notabilis GN=L484_026135 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.1e-72
Identity = 197/512 (38.48%), Postives = 245/512 (47.85%), Query Frame = 1 

Query: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP 60
           M   + A  SLGPRYAP+DPTLPKPWKGLIDGSTG+ YYWNPETNVTQYEKP SLPP LP
Sbjct: 1   MAATEPAAASLGPRYAPEDPTLPKPWKGLIDGSTGVLYYWNPETNVTQYEKPASLPPSLP 60

Query: 61  LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQ-----LSQQPGH 120
            GP P VS  K   IP AHS+P +  +A + QQ    +PQQ GQ  NQ     L QQ   
Sbjct: 61  SGPPPAVSTPKLAPIPGAHSVPPNDVLAQNGQQVT-QVPQQQGQQGNQHGHLMLQQQNPQ 120

Query: 121 L--ISQQHSSVASQVAVNHHPGMQMAPD-----GRQHGSQSNQVMQQQGVFGMSSQ---H 180
           L    QQH  V     +  HP  QM        G+Q   Q  Q + QQ +  M  Q   +
Sbjct: 121 LGPAMQQHGQVQQLGQIMQHPAQQMIQQIPQQSGQQGLQQPGQQIPQQVIHQMQQQTPPN 180

Query: 181 IGQQQVMHQGQNMAHANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPK 240
            G Q  + QGQ + H  QQ+     QQ +   GQ      Q  PQP+ Q +  P   N +
Sbjct: 181 QGLQMALPQGQQLTH--QQLQYMAYQQSVLPQGQ------QITPQPTQQGVQVPQFVNQQ 240

Query: 241 PLV-GQPQGPQYGQQQLQYIGYQQSLHPNVQQNSQQQVQQ---SPLVQPFGNHLEQKPAF 300
               G P+  +   Q    IG+  S       ++ Q +     S  +   G H  Q   F
Sbjct: 241 DFKPGFPKREEDDLQNRNQIGFSPSQFQQAGGSAAQNLAAGTTSAHILQIGAHSGQSQQF 300

Query: 301 LKREEENIQSGNQVGFS-----------SSQFQQSGGTPSIHNLHSGTNSSQMQPLGLAS 360
                   Q G+                 S+FQ       +HN     + S M P GL +
Sbjct: 301 GSSVHNMQQPGSTTRLQPMGTDLAHHSHGSRFQNERDPILMHN-----HQSNMAPGGLRA 360

Query: 361 DQARQFGSSPGN-----MQQQLPVGQVQH---AGTELTHRHHHSRFQDQMGPAVIPGMSG 420
                F    GN       ++ P+   Q    A   +       RF              
Sbjct: 361 GHESNFHGRGGNNYAFNSNKETPIPGPQQPKLAAIPVARSQQDMRFS------------- 420

Query: 421 APFPSAAPGHPSG-TKFAGGPTHNLYNHGSGGSSLPNNALMGPPHVGASDVTNMSPVEVY 474
            P+PS APGH S  +   G    N+YNH +GG   P  A+M PP+ G+ D++ +SPVE Y
Sbjct: 421 GPYPSVAPGHASALSNEPGHAMQNMYNHSTGG---PPYAMMKPPYHGSKDISGLSPVEAY 480


HSP 2 Score: 300.8 bits (769), Expect = 2.9e-78
Identity = 182/386 (47.15%), Postives = 219/386 (56.74%), Query Frame = 1 

Query: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP 60
           M T ++AP +LGPRYAPDDPTLPKPWKGLIDGSTGL YYWNPETNVTQYE+P SLPPPLP
Sbjct: 1   MATAEAAPATLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYERPASLPPPLP 60

Query: 61  LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQQPGHLISQQ 120
            G  P VS  K   IP AHS+  +G VA   Q+      QQ GQ  +QL QQ G ++ Q 
Sbjct: 61  PGLPPAVSTPKLAPIPVAHSVQPNGVVAQMGQKQVPQGAQQQGQQMSQLPQQQGSMVLQG 120

Query: 121 HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH 180
                 Q                Q  SQ  Q +QQ G      Q I QQ   ++ Q + H
Sbjct: 121 SDLQGQQ----------------QPSSQMGQPIQQPG------QFIPQQ---NRPQIIQH 180

Query: 181 ANQQMSQHPNQQPLQNPGQAL-----QNPGQQMPQPSV----QHLGQPNMHNPKPLVGQP 240
           +NQQM     QQ  Q P Q L     Q PGQ MPQ ++    Q LGQ  M +    + QP
Sbjct: 181 SNQQMMSQMGQQMPQQPSQHLPQQQGQQPGQLMPQQAIHQMPQQLGQQTMQHQNSQMSQP 240

Query: 241 QGPQYGQQQLQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQS 300
           QG QY  Q LQY+ YQQS+ P  QQ+SQ +  Q    Q + N  + K A  KRE+ + Q 
Sbjct: 241 QGHQYAHQHLQYMAYQQSVLPKGQQSSQPRGAQG---QQYPNQEDYKAAPPKREDVDFQL 300

Query: 301 GNQVGFSSSQFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQ 360
           GNQ GFS SQFQQ G + S  N+ SGTNS QM   GL   QA+QF  S  NMQQ  P+  
Sbjct: 301 GNQTGFSPSQFQQMGMSSS-QNVSSGTNSVQMPQTGLYLGQAQQFTGSSINMQQPTPMAH 357

Query: 361 VQHAGTELTHRHHHSRFQDQMGPAVI 378
            Q +G +L H+    RFQ+ MGP ++
Sbjct: 361 SQQSGADLVHQQQGRRFQNNMGPGIM 357

[Close]
BLAST of Cucsa.253670 vs. TAIR10
Match: AT3G06480.1 (AT3G06480.1 DEAD box RNA helicase family protein)

HSP 1 Score: 207.2 bits (526), Expect = 2.2e-53
Identity = 169/504 (33.53%), Postives = 220/504 (43.65%), Query Frame = 1 

Query: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP 60
           M T +  P S GPRYAP+DPTLP+PWKGLIDGSTG+ YYWNPETNVTQYE+P S PPP  
Sbjct: 1   MATTEDTPASAGPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNVTQYERP-SAPPPHS 60

Query: 61  LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQ------LSQQPG 120
                   I  P+S     +         HV Q H    QQ  Q  +Q      + Q P 
Sbjct: 61  ATTPKLAQIPVPSSGQGHQAQHEQAKPVGHVSQQH-GFQQQPQQFPSQHVRPQMMQQHPA 120

Query: 121 HLISQQHSSVASQVAVNHHPGMQMAPDGRQHGS-QSNQVMQQQGVFGMSSQHIGQ-QQVM 180
             + QQ      Q          M P    H S Q+ Q   QQ   GM +QH    QQ+ 
Sbjct: 121 QQMPQQSGQQFPQ-----QQSQSMVPHPHGHPSVQTYQPTTQQQQQGMQNQHSQMPQQLS 180

Query: 181 HQGQNMAHANQQ-MSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQP 240
           HQ    AH+ Q  M   P+ Q      Q LQN   Q PQ        P+      L  + 
Sbjct: 181 HQ---YAHSQQHYMGFRPHMQT-----QGLQN-SHQTPQGGPHGQQFPSQQEYNSLAPKR 240

Query: 241 QGPQYGQQQLQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQS 300
           +G ++   +    G+ Q   PN +++  Q             H E   A  K       +
Sbjct: 241 EGDEFHGGKKT--GFSQPHLPNSERSPSQNT-----------HFEANAASQKTNANLAMA 300

Query: 301 ----GNQVGFSSSQFQQSGGT-------PSIHNLHSGT---NSSQMQPLGLASDQARQFG 360
               G Q   + +QFQQ G         P   N    T     S + P    +       
Sbjct: 301 QKCNGPQANAAVTQFQQPGANLIHQQLGPRAPNQMDQTMLHQKSHVSPFQSNNTYENNLQ 360

Query: 361 SSPGN-----MQQQLPVGQVQHAGTELTHRHHHSRFQDQMGPAVIPG---MSGAPFPSAA 420
           S PGN     M+ ++PV   Q                  + PA +P    +SG P  +A 
Sbjct: 361 SRPGNDSYVNMRMEVPVRGAQ-----------------PLHPAAMPKDIRISGGPPTNAD 420

Query: 421 PGHPSGTKFAGGPTHNLYNHGSGGSSLPNNALMGPPHVGASDVTNMSPVEVYRRQHEVTA 474
           P         G   H  Y H   G + PN +L+ P  V + DV ++SPVE+YR+QHEVT 
Sbjct: 421 PA-------MGQTGHGTYGHA--GPAFPNKSLVRPHFVTSPDVPHLSPVEIYRKQHEVTT 449

[Close]
BLAST of Cucsa.253670 vs. TAIR10
Match: AT3G01540.2 (AT3G01540.2 DEAD box RNA helicase 1)

HSP 1 Score: 83.6 bits (205), Expect = 3.7e-16
Identity = 39/64 (60.94%), Postives = 44/64 (68.75%), Query Frame = 1 

Query: 14 RYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLPLGPHPGVSISKPT 73
          RYAP+D TLPKPWKGLID  TG  Y+WNPETNVTQYEKP    P LP    P VS+S   
Sbjct: 11 RYAPEDHTLPKPWKGLIDDRTGYLYFWNPETNVTQYEKPT---PSLPPKFSPAVSVSSSV 70

Query: 74 SIPE 78
           + +
Sbjct: 71 QVQQ 71


HSP 2 Score: 61.2 bits (147), Expect = 1.9e-09
Identity = 39/109 (35.78%), Postives = 55/109 (50.46%), Query Frame = 1 

Query: 365 HSRFQDQMGPAVIPGMSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSGGSSLPNNALMGP 424
           +SR  +++      G SG P+ + A         A G   + Y   S    LP++A    
Sbjct: 84  YSRGSERVSRFSEGGRSGPPYSNGA---------ANGVGDSAYGAASTRVPLPSSA---- 143

Query: 425 PHVGASDVTNMSPVEVYRRQHEVTATGDNVPAPFMTFEATGFPPEILRE 474
                   + +SP E Y R+HE+T +G  VP P M+FEATGFPPE+LRE
Sbjct: 144 ------PASELSP-EAYSRRHEITVSGGQVPPPLMSFEATGFPPELLRE 172

[Close]
BLAST of Cucsa.253670 vs. TAIR10
Match: AT5G14610.1 (AT5G14610.1 DEAD box RNA helicase family protein)

HSP 1 Score: 82.8 bits (203), Expect = 6.2e-16
Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 1 

Query: 14 RYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPP 59
          RYAP+DP LPKPWKGL+D  TG  Y+WNPETNVTQYE+P S  PP
Sbjct: 9  RYAPEDPNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSAPP 53


HSP 2 Score: 60.1 bits (144), Expect = 4.3e-09
Identity = 40/92 (43.48%), Postives = 53/92 (57.61%), Query Frame = 1 

Query: 387 SAAPGHPSGTKF--AG--GP-THNLYNHGSGGSSLPNNALMGPPHVGASDVTNMSPVEVY 446
           S  P   SG++F  AG  GP + N    G G +S   ++  GPP   A +   +SP E Y
Sbjct: 87  SDGPKSDSGSRFNEAGRTGPISSNDAASGLGNASSGGSSARGPPSSAAGN--ELSP-EAY 146

Query: 447 RRQHEVTATGDNVPAPFMTFEATGFPPEILRE 474
            R+HE+T +G  VP P M+FEATG P E+LRE
Sbjct: 147 CRKHEITVSGGQVPPPLMSFEATGLPNELLRE 175

[Close]
BLAST of Cucsa.253670 vs. TAIR10
Match: AT1G15780.1 (AT1G15780.1 unknown protein)

HSP 1 Score: 57.4 bits (137), Expect = 2.8e-08
Identity = 82/308 (26.62%), Postives = 113/308 (36.69%), Query Frame = 1 

Query: 68  SISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQQPGHLISQQHSSVASQ 127
           S + P+S+P   S+ ++ T +  V   + N+    G L +          S QH      
Sbjct: 154 STALPSSMPPVSSITNNNTTS--VVNQNANMQNVAGMLQDS---------SGQHG----- 213

Query: 128 VAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMH--QGQNMAHANQQM 187
           ++ N   G Q    GR H   S Q  Q      +  Q + QQ +    Q  N+ + N  +
Sbjct: 214 LSSNMFSGPQRQMLGRPHAMSSQQQQQPY----LYQQQLQQQLLKQNFQSGNVPNPNSLL 273

Query: 188 SQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVG----QPQGPQYGQQQL 247
             H  QQ  QN  Q  Q    Q P        QP+  N  PL G    Q   PQ   QQ 
Sbjct: 274 PSHIQQQQ-QNVLQPNQLHSSQQPGVPTSAT-QPSTVNSAPLQGLHTNQQSSPQLSSQQT 333

Query: 248 ------QYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQ- 307
                 Q+       HP  QQ S    QQS L Q   + L+Q+P  L R++    SG Q 
Sbjct: 334 TQSMLRQHQSSMLRQHPQSQQASGIHQQQSSLPQQSISPLQQQPTQLMRQQAANSSGIQQ 393

Query: 308 --------VGFSSSQFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQ 355
                   VG    Q QQ       + ++     SQ QPL     Q +Q   +   +  Q
Sbjct: 394 KQMMGQHVVGDMQQQHQQRLLNQQNNVMNIQQQQSQQQPLQQPQQQQKQQPPAQQQLMSQ 439

[Close]
BLAST of Cucsa.253670 vs. TAIR10
Match: AT1G25540.1 (AT1G25540.1 phytochrome and flowering time regulatory protein (PFT1))

HSP 1 Score: 50.1 bits (118), Expect = 4.5e-06
Identity = 84/356 (23.60%), Postives = 132/356 (37.08%), Query Frame = 1 

Query: 80  SMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQQP---GHLISQQHSSVASQVAVNHHPGM 139
           S PSSG  A    Q+ Y +   +G L+ Q   QP     L   + +S +  +A N  P M
Sbjct: 542 SQPSSG--AMQTSQSKY-VKVWEGNLSGQRQGQPVLITRLEGYRSASASDSLAANWPPTM 601

Query: 140 QMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAHANQQMSQHPNQQPLQN 199
           Q+                   V  +S  H+  +Q + +   +    + MSQH     LQ+
Sbjct: 602 QI-------------------VRLISQDHMNNKQYVGKADFLVF--RAMSQHGFLGQLQD 661

Query: 200 PG--QALQNPGQQM----PQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQLQYIGYQQSL 259
                 +Q P Q +       + + +G   +     +V +PQ P   QQQ Q +  QQ  
Sbjct: 662 KKLCAVIQLPSQTLLLSVSDKACRLIGM--LFPGDMVVFKPQIPNQQQQQQQQLHQQQQQ 721

Query: 260 HPNVQQNSQQQ--VQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSSQFQQSGGT 319
              +QQ  QQQ  +QQ  + Q     L+Q+    +++++     +Q+     Q QQ    
Sbjct: 722 QQQIQQQQQQQQHLQQQQMPQ-----LQQQQQQHQQQQQQQHQLSQLQHHQQQQQQQQQQ 781

Query: 320 PSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQL-PVGQVQHAGTELTHRHHHSR 379
              H L    +  Q Q      +Q +Q  S    MQQQ  P+ Q+Q              
Sbjct: 782 QQQHQLTQLQHHHQQQQQASPLNQMQQQTSPLNQMQQQTSPLNQMQ-------------- 836

Query: 380 FQDQMGPAVIPGMSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSGGSSLPNNALMG 424
            Q Q    ++ G               G  FA  P  +    G G  ++P    MG
Sbjct: 842 -QQQQPQQMVMG---------------GQAFAQAPGRSQQGGGGGQPNMPGAGFMG 836

[Close]
BLAST of Cucsa.253670 vs. NCBI nr
Match: gi|778678708|ref|XP_011651018.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 46 isoform X2 [Cucumis sativus])

HSP 1 Score: 824.3 bits (2128), Expect = 1.1e-235
Identity = 422/528 (79.92%), Postives = 427/528 (80.87%), Query Frame = 1 

Query: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP 60
           METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP 60

Query: 61  LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQQPGHLISQQ 120
           LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQ  GHLISQQ
Sbjct: 61  LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQHTGHLISQQ 120

Query: 121 HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH 180
           HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH
Sbjct: 121 HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH 180

Query: 181 ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQ 240
           ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQ
Sbjct: 181 ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQ 240

Query: 241 LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSS 300
           LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSS
Sbjct: 241 LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSS 300

Query: 301 QFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQHAGTELT 360
           QFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQHAGTELT
Sbjct: 301 QFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQHAGTELT 360

Query: 361 HRHHHSRFQDQMGPAVIPGMSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSG-GSSLPNN 420
           HRHHHSRFQDQMGPAVIPG    P     PG      + G       N GSG G   P  
Sbjct: 361 HRHHHSRFQDQMGPAVIPGQQ--PVAENLPGRGGNEYYFG------RNEGSGPGPHQPRL 420

Query: 421 ALMGPPHVGASDVTNMSPVE---------------------VYRRQ-------------- 474
           A +  P   +   T MS V                      +Y                 
Sbjct: 421 AAI--PMARSQQDTRMSAVPFPTAAPGHPSGTNFSAVPTHNLYSHGSGGPTLSNNLMGPT 480

[Close]
BLAST of Cucsa.253670 vs. NCBI nr
Match: gi|700201927|gb|KGN57060.1| (hypothetical protein Csa_3G151370 [Cucumis sativus])

HSP 1 Score: 792.3 bits (2045), Expect = 4.5e-226
Identity = 385/412 (93.45%), Postives = 386/412 (93.69%), Query Frame = 1 

Query: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP 60
           METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 42  METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP 101

Query: 61  LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQQPGHLISQQ 120
           LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQ  GHLISQQ
Sbjct: 102 LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQHTGHLISQQ 161

Query: 121 HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH 180
           HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH
Sbjct: 162 HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH 221

Query: 181 ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQ 240
           ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQ
Sbjct: 222 ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQ 281

Query: 241 LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSS 300
           LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSS
Sbjct: 282 LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSS 341

Query: 301 QFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQHAGTELT 360
           QFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQHAGTELT
Sbjct: 342 QFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQHAGTELT 401

Query: 361 HRHHHSRFQDQMGPAVIPGMSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSG 413
           HRHHHSRFQDQMGPAVIPG    P     PG      + G       N GSG
Sbjct: 402 HRHHHSRFQDQMGPAVIPGQQ--PVAENLPGRGGNEYYFG------RNEGSG 445

[Close]
BLAST of Cucsa.253670 vs. NCBI nr
Match: gi|700201927|gb|KGN57060.1| (hypothetical protein Csa_3G151370 [Cucumis sativus])

HSP 1 Score: 232.6 bits (592), Expect = 1.4e-57
Identity = 172/413 (41.65%), Postives = 192/413 (46.49%), Query Frame = 1 

Query: 85  GTVAPHV-QQNHYNIPQQDGQLNNQLSQQPGHLISQQHSSVASQVAVNHHPGMQMAPDGR 144
           G  + H+ QQ   +  Q     N Q+SQ P    +QQ      Q   N  PG QM     
Sbjct: 201 GMSSQHIGQQQVMHQGQNMAHANQQMSQHP----NQQPLQNPGQALQN--PGQQMPQPSV 260

Query: 145 QHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAHANQQMSQHPNQQPLQNPGQALQN 204
           QH  Q N    +  V        GQQQ+ + G        Q S HPN Q         QN
Sbjct: 261 QHLGQPNMHNPKPLVGQPQGPQYGQQQLQYIGY-------QQSLHPNVQ---------QN 320

Query: 205 PGQQMPQ-PSVQHLGQPNMHNPKPLVGQPQGPQYGQQ------QLQYIGYQQSLHPNVQQ 264
             QQ+ Q P VQ  G      P  L  + +  Q G Q      Q Q  G   S+H     
Sbjct: 321 SQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSSQFQQSGGTPSIHNLHSG 380

Query: 265 NSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSSQFQQSGGTPSIHNLHS 324
            +  Q+Q   L           P        N+Q    VG       Q  GT   H  H 
Sbjct: 381 TNSSQMQPLGLASDQARQFGSSPG-------NMQQQLPVGQV-----QHAGTELTHRHHH 440

Query: 325 GTNSSQMQPLGLASDQ----------------ARQFGSSPGNMQQQLPVGQVQHAGTELT 384
                QM P  +   Q                 R  GS PG  Q +L       A   + 
Sbjct: 441 SRFQDQMGPAVIPGQQPVAENLPGRGGNEYYFGRNEGSGPGPHQPRL-------AAIPMA 500

Query: 385 HRHHHSRFQDQMGPAVIPGMSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSGGSSLPNNA 444
                SR            MSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSGGSSLPNNA
Sbjct: 501 RSQQDSR------------MSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSGGSSLPNNA 560

Query: 445 LMGPPHVGASDVTNMSPVEVYRRQHEVTATGDNVPAPFMTFEATGFPPEILRE 474
           LMGPPHVGASDVTNMSPVEVYR+QHEVTA+GDNVPAPFMTFEATGFPPEILRE
Sbjct: 561 LMGPPHVGASDVTNMSPVEVYRQQHEVTASGDNVPAPFMTFEATGFPPEILRE 560


HSP 2 Score: 792.3 bits (2045), Expect = 4.5e-226
Identity = 385/412 (93.45%), Postives = 386/412 (93.69%), Query Frame = 1 

Query: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP 60
           METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP 60

Query: 61  LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQQPGHLISQQ 120
           LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQ  GHLISQQ
Sbjct: 61  LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQHTGHLISQQ 120

Query: 121 HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH 180
           HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH
Sbjct: 121 HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH 180

Query: 181 ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQ 240
           ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQ
Sbjct: 181 ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQ 240

Query: 241 LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSS 300
           LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSS
Sbjct: 241 LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSS 300

Query: 301 QFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQHAGTELT 360
           QFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQHAGTELT
Sbjct: 301 QFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQHAGTELT 360

Query: 361 HRHHHSRFQDQMGPAVIPGMSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSG 413
           HRHHHSRFQDQMGPAVIPG    P     PG      + G       N GSG
Sbjct: 361 HRHHHSRFQDQMGPAVIPGQQ--PVAENLPGRGGNEYYFG------RNEGSG 404

[Close]
BLAST of Cucsa.253670 vs. NCBI nr
Match: gi|778678702|ref|XP_011651016.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 46 isoform X1 [Cucumis sativus])

HSP 1 Score: 232.6 bits (592), Expect = 1.4e-57
Identity = 172/413 (41.65%), Postives = 192/413 (46.49%), Query Frame = 1 

Query: 85  GTVAPHV-QQNHYNIPQQDGQLNNQLSQQPGHLISQQHSSVASQVAVNHHPGMQMAPDGR 144
           G  + H+ QQ   +  Q     N Q+SQ P    +QQ      Q   N  PG QM     
Sbjct: 160 GMSSQHIGQQQVMHQGQNMAHANQQMSQHP----NQQPLQNPGQALQN--PGQQMPQPSV 219

Query: 145 QHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAHANQQMSQHPNQQPLQNPGQALQN 204
           QH  Q N    +  V        GQQQ+ + G        Q S HPN Q         QN
Sbjct: 220 QHLGQPNMHNPKPLVGQPQGPQYGQQQLQYIGY-------QQSLHPNVQ---------QN 279

Query: 205 PGQQMPQ-PSVQHLGQPNMHNPKPLVGQPQGPQYGQQ------QLQYIGYQQSLHPNVQQ 264
             QQ+ Q P VQ  G      P  L  + +  Q G Q      Q Q  G   S+H     
Sbjct: 280 SQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSSQFQQSGGTPSIHNLHSG 339

Query: 265 NSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSSQFQQSGGTPSIHNLHS 324
            +  Q+Q   L           P        N+Q    VG       Q  GT   H  H 
Sbjct: 340 TNSSQMQPLGLASDQARQFGSSPG-------NMQQQLPVGQV-----QHAGTELTHRHHH 399

Query: 325 GTNSSQMQPLGLASDQ----------------ARQFGSSPGNMQQQLPVGQVQHAGTELT 384
                QM P  +   Q                 R  GS PG  Q +L       A   + 
Sbjct: 400 SRFQDQMGPAVIPGQQPVAENLPGRGGNEYYFGRNEGSGPGPHQPRL-------AAIPMA 459

Query: 385 HRHHHSRFQDQMGPAVIPGMSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSGGSSLPNNA 444
                SR            MSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSGGSSLPNNA
Sbjct: 460 RSQQDSR------------MSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSGGSSLPNNA 519

Query: 445 LMGPPHVGASDVTNMSPVEVYRRQHEVTATGDNVPAPFMTFEATGFPPEILRE 474
           LMGPPHVGASDVTNMSPVEVYR+QHEVTA+GDNVPAPFMTFEATGFPPEILRE
Sbjct: 520 LMGPPHVGASDVTNMSPVEVYRQQHEVTASGDNVPAPFMTFEATGFPPEILRE 519


HSP 2 Score: 792.3 bits (2045), Expect = 4.5e-226
Identity = 385/412 (93.45%), Postives = 386/412 (93.69%), Query Frame = 1 

Query: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP 60
           METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP 60

Query: 61  LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQQPGHLISQQ 120
           LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQ  GHLISQQ
Sbjct: 61  LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQHTGHLISQQ 120

Query: 121 HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH 180
           HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH
Sbjct: 121 HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH 180

Query: 181 ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQ 240
           ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQ
Sbjct: 181 ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQ 240

Query: 241 LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSS 300
           LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSS
Sbjct: 241 LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSS 300

Query: 301 QFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQHAGTELT 360
           QFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQHAGTELT
Sbjct: 301 QFQQSGGTPSIHNLHSGTNSSQMQPLGLASDQARQFGSSPGNMQQQLPVGQVQHAGTELT 360

Query: 361 HRHHHSRFQDQMGPAVIPGMSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSG 413
           HRHHHSRFQDQMGPAVIPG    P     PG      + G       N GSG
Sbjct: 361 HRHHHSRFQDQMGPAVIPGQQ--PVAENLPGRGGNEYYFG------RNEGSG 404

[Close]
BLAST of Cucsa.253670 vs. NCBI nr
Match: gi|778678715|ref|XP_004134467.2| (PREDICTED: DEAD-box ATP-dependent RNA helicase 46 isoform X4 [Cucumis sativus])

HSP 1 Score: 232.6 bits (592), Expect = 1.4e-57
Identity = 172/413 (41.65%), Postives = 192/413 (46.49%), Query Frame = 1 

Query: 85  GTVAPHV-QQNHYNIPQQDGQLNNQLSQQPGHLISQQHSSVASQVAVNHHPGMQMAPDGR 144
           G  + H+ QQ   +  Q     N Q+SQ P    +QQ      Q   N  PG QM     
Sbjct: 160 GMSSQHIGQQQVMHQGQNMAHANQQMSQHP----NQQPLQNPGQALQN--PGQQMPQPSV 219

Query: 145 QHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAHANQQMSQHPNQQPLQNPGQALQN 204
           QH  Q N    +  V        GQQQ+ + G        Q S HPN Q         QN
Sbjct: 220 QHLGQPNMHNPKPLVGQPQGPQYGQQQLQYIGY-------QQSLHPNVQ---------QN 279

Query: 205 PGQQMPQ-PSVQHLGQPNMHNPKPLVGQPQGPQYGQQ------QLQYIGYQQSLHPNVQQ 264
             QQ+ Q P VQ  G      P  L  + +  Q G Q      Q Q  G   S+H     
Sbjct: 280 SQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSSQFQQSGGTPSIHNLHSG 339

Query: 265 NSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSSQFQQSGGTPSIHNLHS 324
            +  Q+Q   L           P        N+Q    VG       Q  GT   H  H 
Sbjct: 340 TNSSQMQPLGLASDQARQFGSSPG-------NMQQQLPVGQV-----QHAGTELTHRHHH 399

Query: 325 GTNSSQMQPLGLASDQ----------------ARQFGSSPGNMQQQLPVGQVQHAGTELT 384
                QM P  +   Q                 R  GS PG  Q +L       A   + 
Sbjct: 400 SRFQDQMGPAVIPGQQPVAENLPGRGGNEYYFGRNEGSGPGPHQPRL-------AAIPMA 459

Query: 385 HRHHHSRFQDQMGPAVIPGMSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSGGSSLPNNA 444
                SR            MSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSGGSSLPNNA
Sbjct: 460 RSQQDSR------------MSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSGGSSLPNNA 519

Query: 445 LMGPPHVGASDVTNMSPVEVYRRQHEVTATGDNVPAPFMTFEATGFPPEILRE 474
           LMGPPHVGASDVTNMSPVEVYR+QHEVTA+GDNVPAPFMTFEATGFPPEILRE
Sbjct: 520 LMGPPHVGASDVTNMSPVEVYRQQHEVTASGDNVPAPFMTFEATGFPPEILRE 519


HSP 2 Score: 765.4 bits (1975), Expect = 5.9e-218
Identity = 390/492 (79.27%), Postives = 401/492 (81.50%), Query Frame = 1 

Query: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP 60
           METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP
Sbjct: 1   METGDSAPPSLGPRYAPDDPTLPKPWKGLIDGSTGLSYYWNPETNVTQYEKPVSLPPPLP 60

Query: 61  LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQQPGHLISQQ 120
           LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQQPGHLISQQ
Sbjct: 61  LGPHPGVSISKPTSIPEAHSMPSSGTVAPHVQQNHYNIPQQDGQLNNQLSQQPGHLISQQ 120

Query: 121 HSSVASQVAVNHHPGMQMAPDGRQHGSQSNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH 180
           HSSVASQVAVNHHPGMQMAPDGRQHGSQ NQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH
Sbjct: 121 HSSVASQVAVNHHPGMQMAPDGRQHGSQPNQVMQQQGVFGMSSQHIGQQQVMHQGQNMAH 180

Query: 181 ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMHNPKPLVGQPQGPQYGQQQ 240
           ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNM NPKPLVGQPQGPQYGQQQ
Sbjct: 181 ANQQMSQHPNQQPLQNPGQALQNPGQQMPQPSVQHLGQPNMQNPKPLVGQPQGPQYGQQQ 240

Query: 241 LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKREEENIQSGNQVGFSSS 300
           LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKR+EENIQSGNQVGF SS
Sbjct: 241 LQYIGYQQSLHPNVQQNSQQQVQQSPLVQPFGNHLEQKPAFLKRDEENIQSGNQVGFPSS 300

Query: 301 QFQQSGGTPSIHNLHS----------------GTNSSQMQPLGLASDQARQFGS------ 360
           QFQQSGGTPSIHN+HS                  N  Q  P+G     + +         
Sbjct: 301 QFQQSGGTPSIHNIHSGTNSSQMQQLGTFGSSPGNMQQQLPVGQVQHASTELTHRHHHSR 360

Query: 361 -----SPGNMQQQLPVGQ--VQHAGTELTHRHHHSRFQDQMGP-----AVIP-------- 420
                 P  MQ Q PV +      G E     +       +GP     A IP        
Sbjct: 361 FQDQMGPAVMQGQQPVAENLPGRGGNEYYFGRNEG---SGIGPHQPRLAAIPMARSQQDS 420

Query: 421 GMSGAPFPSAAPGHPSGTKFAGGPTHNLYNHGSGGSSLPNNALMGPPHVGASDVTNMSPV 451
            MSG PFP++AP HPSGTKFAGGPTHNLY+HGSG  SLPNNALMGPPHVG SDV NMSPV
Sbjct: 421 RMSGDPFPNSAPVHPSGTKFAGGPTHNLYSHGSGVPSLPNNALMGPPHVGVSDV-NMSPV 480

The following BLAST results are available for this feature:
BLAST of Cucsa.253670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RH40_ARATH3.9e-5233.53DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis thaliana GN=RH40 PE=2 SV=1[more]
RH40_ORYSJ5.7e-1971.93DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica GN=Os01g0... [more]
RH14_ORYSJ4.5e-1648.75DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica GN=Os01g0... [more]
DB10_NICSY2.2e-1577.27ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris PE=2 SV=1[more]
RH14_ARATH6.5e-1560.94DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana GN=RH14 PE=1 SV=2[more]
BLAST of Cucsa.253670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L544_CUCSA3.2e-22693.45Uncharacterized protein OS=Cucumis sativus GN=Csa_3G151370 PE=4 SV=1[more]
A0A0A0L544_CUCSA9.6e-5841.65Uncharacterized protein OS=Cucumis sativus GN=Csa_3G151370 PE=4 SV=1[more]
A0A0A0LAH9_CUCSA6.5e-4635.05Uncharacterized protein OS=Cucumis sativus GN=Csa_3G151380 PE=4 SV=1[more]
W9R868_9ROSA2.2e-7842.57DEAD-box ATP-dependent RNA helicase 40 OS=Morus notabilis GN=L484_026135 PE=4 SV... [more]
W9R868_9ROSA3.1e-7238.48DEAD-box ATP-dependent RNA helicase 40 OS=Morus notabilis GN=L484_026135 PE=4 SV... [more]
BLAST of Cucsa.253670 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G06480.12.2e-5333.53 DEAD box RNA helicase family protein[more]
AT3G01540.23.7e-1660.94 DEAD box RNA helicase 1[more]
AT5G14610.16.2e-1673.33 DEAD box RNA helicase family protein[more]
AT1G15780.12.8e-0826.62 unknown protein[more]
AT1G25540.14.5e-0623.60 phytochrome and flowering time regulatory protein (PFT1)[more]
BLAST of Cucsa.253670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778678708|ref|XP_011651018.1|1.1e-23579.92PREDICTED: DEAD-box ATP-dependent RNA helicase 46 isoform X2 [Cucumis sativus][more]
gi|700201927|gb|KGN57060.1|4.5e-22693.45hypothetical protein Csa_3G151370 [Cucumis sativus][more]
gi|700201927|gb|KGN57060.1|1.4e-5741.65hypothetical protein Csa_3G151370 [Cucumis sativus][more]
gi|778678702|ref|XP_011651016.1|1.4e-5741.65PREDICTED: DEAD-box ATP-dependent RNA helicase 46 isoform X1 [Cucumis sativus][more]
gi|778678715|ref|XP_004134467.2|1.4e-5741.65PREDICTED: DEAD-box ATP-dependent RNA helicase 46 isoform X4 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.253670.1Cucsa.253670.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainPFAMPF00397WWcoord: 22..52
score: 4.
IPR001202WW domainSMARTSM00456ww_5coord: 21..54
score: 1.
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 26..52
scor
IPR001202WW domainPROFILEPS50020WW_DOMAIN_2coord: 20..54
score: 11
IPR001202WW domainunknownSSF51045WW domaincoord: 14..53
score: 5.8
NoneNo IPR availableGENE3DG3DSA:2.20.70.10coord: 18..52
score: 6.
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 424..473
score: 2.1
NoneNo IPR availablePANTHERPTHR24031:SF255DEAD-BOX ATP-DEPENDENT RNA HELICASE 40coord: 424..473
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.253670Cucumber (Gy14) v1cgycgyB131
Cucsa.253670Cucurbita maxima (Rimu)cgycmaB0714
Cucsa.253670Cucurbita maxima (Rimu)cgycmaB0709
Cucsa.253670Cucurbita maxima (Rimu)cgycmaB0727
Cucsa.253670Cucurbita maxima (Rimu)cgycmaB0731
Cucsa.253670Cucurbita moschata (Rifu)cgycmoB0700
Cucsa.253670Cucurbita moschata (Rifu)cgycmoB0707
Cucsa.253670Cucurbita moschata (Rifu)cgycmoB0718
Cucsa.253670Cucurbita moschata (Rifu)cgycmoB0720
Cucsa.253670Wild cucumber (PI 183967)cgycpiB383
Cucsa.253670Wild cucumber (PI 183967)cgycpiB394
Cucsa.253670Cucumber (Chinese Long) v2cgycuB366
Cucsa.253670Cucumber (Chinese Long) v2cgycuB375
Cucsa.253670Melon (DHL92) v3.5.1cgymeB430
Cucsa.253670Melon (DHL92) v3.5.1cgymeB439
Cucsa.253670Watermelon (Charleston Gray)cgywcgB451
Cucsa.253670Watermelon (Charleston Gray)cgywcgB453
Cucsa.253670Watermelon (97103) v1cgywmB479
Cucsa.253670Watermelon (97103) v1cgywmB483
Cucsa.253670Cucurbita pepo (Zucchini)cgycpeB0671
Cucsa.253670Cucurbita pepo (Zucchini)cgycpeB0676
Cucsa.253670Cucurbita pepo (Zucchini)cgycpeB0682
Cucsa.253670Cucurbita pepo (Zucchini)cgycpeB0687
Cucsa.253670Bottle gourd (USVL1VR-Ls)cgylsiB412
Cucsa.253670Bottle gourd (USVL1VR-Ls)cgylsiB420
Cucsa.253670Melon (DHL92) v3.6.1cgymedB425
Cucsa.253670Melon (DHL92) v3.6.1cgymedB432
Cucsa.253670Silver-seed gourdcarcgyB0083
Cucsa.253670Silver-seed gourdcarcgyB0383
Cucsa.253670Silver-seed gourdcarcgyB0681
Cucsa.253670Silver-seed gourdcarcgyB0960
Cucsa.253670Cucumber (Chinese Long) v3cgycucB387
Cucsa.253670Cucumber (Chinese Long) v3cgycucB399
Cucsa.253670Watermelon (97103) v2cgywmbB452
Cucsa.253670Watermelon (97103) v2cgywmbB453
Cucsa.253670Wax gourdcgywgoB504
Cucsa.253670Wax gourdcgywgoB521
Cucsa.253670Wax gourdcgywgoB522