Cucsa.253540 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTAATGTTATTTTTGTGGATAGATATATATTAAAAGAGGGAGAGAGAAATGGAGGTGGAGAGAAGAAGAGGGAAAATGGAAGAGGAGAGAAAAAATGAAGAGATGAAGAAGATGGGAAATGATTATGATAATTATCATAAAGTTGAAATGGTTTTTAGGGTTTTGGGATTTGTATTGAGTTTTGTGGCAGCCATTGTTGTGGGACTTAACAATCAAACCAAAGTTGTTCCTCTTGCCGTCTCCCTCAACTCTCCTCCTTTGGATTATACTTTCATTGCTAAATGGCATTACTTGTCTGCTTTTGTGTAAGTCCTCTTTTCTCACTCTCTTTTTATCTCTATTACTATTCTCTCGATCGAGTTTATTTAAAAATTTGAACCTATAATCTTTCAACATAGGTTTGTTTTTTTAGTTTAATTAACTTATAGGTGAAGATTCAAACCTTTAACACTTTGGTTGTTAGTAGTGTAACTTGACGATTTTGAAGTTTTTCTTCGAAAGAATGACTAAATGCTATAGTTTACAAAATATGGACGAACCAAACATTAAAATGATTTGTTAATTTACATTCAAAATTACTAGTTCAAGAAATTGATTACGATGTCTCTTAAAAGACACGTAGATTAATTACCCGTCCTTTTATCAATTAATAAGCTATTTTTTTTAGTTCAAACCTATGTTAATATTCTCAACTAAAAGATGAGATGTTTGGATCTCGTTTTTTAATTTTAAAAAAATCTTATATGTGTTTTTTAATATTGGTAGATGTTCGAACTAAAAAAAATTATATTATATTGTCTTCCATTTCTAATCTTCTCTTCTCAACGTTCAAGTATCCATCTCTGTAACCCATCATATGATGTTTGCTTTCTGTTTATTAATTTCATAACTTTTGTCACACTCAAACCTAAAGGCAAATGGAACGTTATCTTAGATAATATAAATTTGTTTTTCCAAATGATTTTTTAGTAAGAAATATTATATTACTTAGTTCTATTAGTACAATTATTGTGTATGTATATAGTTCCTCAAAATAATACACAAATTTCTAAATTATAAAATTCGTTTTCTTTTGGCAAAAGCAACATTTTGTATGAATATGCATTTATGTCTCAAACCCTTAGATTTAATTTTTTGTTTTCTCCATTTGAAAATTTTGATATACAATTACAAAGTTATATTTATAAACGCATAATGTCAACTTGAATGTTGTCTAATTGATTGAGATAGTATAATATCAATAAAAAATTTAGAAGTTTGAATCTCCACCCTAACGTACCGGTTGAATCTCGGAAATATCATTTATATTTTACTTTTGAGTAATTTGGTCCTATTATTTCTCTATTTTAGTCTTTCGCATATTTTAGGTTATATATGTTTTAGTGTTAAGTATCTAGTTGAGTAGCGACAACAAACCTTATATAGCATTGTGTGACAAAATAAAGTTTACCTAAGTTTTATCTCCAAATTTCTTTAACATCTAAAAGCATACTGTGTGATTTGTAGGTACCTTTTAGCAACAAATATAATAGCATGTTCATATAGCTTCCTATCGTTGTTCCTTTTGTTGAAAAACAAGAGCAAGGACAACATCTTAGGCTTATTGATCATCGTTCTCGACACGGTCATGGTGGCACTGCTCTTCTCCGGCAGCGGAGCTGCAGGGGCCGTCGGAGTTATCGCTTACCAAGGGAACACACACGTGCAATGGAACAAAGTGTGCGACATATATGGTAGATTTTGCAAGCAAGTAGCAGCCTCTACTGTGCTTTCTCTTGCTGGAGCTGTTGTATTTATGTCCTTAGTTGTTTTGGCTTCTGTGGGCCTCCAAAAGAGGCCCAATTAAATGGGCTGGGCTTTTAGCCTGTCTTTCATCTTCTTGATAGTATGGGCTTTAGGCCCAGTATAAACTTCCCCTGTAGCCCATTAAAGTTAATTAGGTTATCAATTATTGTGGAACTGAAATGTTATAATTTGTTACACTTGTAATATCCAAAGGGAGACTACTTTTTATTTATGTAGAATATTTTATTTA CTTAATGTTATTTTTGTGGATAGATATATATTaaaagagggagagagaaatggaggtggagagaagaagagggaaaatggaagaggagagaaaaaatgaagagatgaagaAGATGGGAAATGATTATGATAATTATCATAAAGTTGAAATGGTTTTTAGGGTTTTGGGATTTGTATTGAGTTTTGTGGCAGCCATTGTTGTGGGACTTAACAATCAAACCAAAGTTGTTCCTCTTGCCGTCTCCCTCAACTCTCCTCCTTTGGATTATACTTTCATTGCTAAATGGCATTACTTGTCTGCTTTTGTGTACCTTTTAGCAACAAATATAATAGCATGTTCATATAGCTTCCTATCGTTGTTCCTTTTGTTGAAAAACAAGAGCAAGGACAACATCTTAGGCTTATTGATCATCGTTCTCGACACGGTCATGGTGGCACTGCTCTTCTCCGGCAGCGGAGCTGCAGGGGCCGTCGGAGTTATCGCTTACCAAGGGAACACACACGTGCAATGGAACAAAGTGTGCGACATATATGGTAGATTTTGCAAGCAAGTAGCAGCCTCTACTGTGCTTTCTCTTGCTGGAGCTGTTGTATTTATGTCCTTAGTTGTTTTGGCTTCTGTGGGCCTCCAAAAGAGGCCCAATTAAATGGGCTGGGCTTTTAGCCTGTCTTTCATCTTCTTGATAGTATGGGCTTTAGGCCCAGTATAAACTTCCCCTGTAGCCCATTAAAGTTAATTAGGTTATCAATTATTGTGGAACTGAAATGTTATAATTTGTTACACTTGTAATATCCAAAGGGAGACTACTTTTTATTTATGTAGAATATTTTATTTA ATGGAGGTGGAGAGAAGAAGAGGGAAAATGGAAGAGGAGAGAAAAAATGAAGAGATGAAGAAGATGGGAAATGATTATGATAATTATCATAAAGTTGAAATGGTTTTTAGGGTTTTGGGATTTGTATTGAGTTTTGTGGCAGCCATTGTTGTGGGACTTAACAATCAAACCAAAGTTGTTCCTCTTGCCGTCTCCCTCAACTCTCCTCCTTTGGATTATACTTTCATTGCTAAATGGCATTACTTGTCTGCTTTTGTGTACCTTTTAGCAACAAATATAATAGCATGTTCATATAGCTTCCTATCGTTGTTCCTTTTGTTGAAAAACAAGAGCAAGGACAACATCTTAGGCTTATTGATCATCGTTCTCGACACGGTCATGGTGGCACTGCTCTTCTCCGGCAGCGGAGCTGCAGGGGCCGTCGGAGTTATCGCTTACCAAGGGAACACACACGTGCAATGGAACAAAGTGTGCGACATATATGGTAGATTTTGCAAGCAAGTAGCAGCCTCTACTGTGCTTTCTCTTGCTGGAGCTGTTGTATTTATGTCCTTAGTTGTTTTGGCTTCTGTGGGCCTCCAAAAGAGGCCCAATTAA MEVERRRGKMEEERKNEEMKKMGNDYDNYHKVEMVFRVLGFVLSFVAAIVVGLNNQTKVVPLAVSLNSPPLDYTFIAKWHYLSAFVYLLATNIIACSYSFLSLFLLLKNKSKDNILGLLIIVLDTVMVALLFSGSGAAGAVGVIAYQGNTHVQWNKVCDIYGRFCKQVAASTVLSLAGAVVFMSLVVLASVGLQKRPN*
BLAST of Cucsa.253540 vs. Swiss-Prot
Match: CSPL5_SOYBN (CASP-like protein 1E2 OS=Glycine max PE=2 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 2.5e-45 Identity = 88/164 (53.66%), Postives = 120/164 (73.17%), Query Frame = 1
BLAST of Cucsa.253540 vs. Swiss-Prot
Match: CSPL6_SOYBN (CASP-like protein 1E1 OS=Glycine max PE=2 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 4.3e-45 Identity = 87/164 (53.05%), Postives = 122/164 (74.39%), Query Frame = 1
BLAST of Cucsa.253540 vs. Swiss-Prot
Match: CSPL5_VITVI (CASP-like protein 1E2 OS=Vitis vinifera GN=VIT_05s0020g01820 PE=2 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 6.9e-43 Identity = 91/196 (46.43%), Postives = 128/196 (65.31%), Query Frame = 1
BLAST of Cucsa.253540 vs. Swiss-Prot
Match: CSPL9_RICCO (CASP-like protein 1E1 OS=Ricinus communis GN=RCOM_0680180 PE=2 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 9.0e-43 Identity = 88/178 (49.44%), Postives = 127/178 (71.35%), Query Frame = 1
BLAST of Cucsa.253540 vs. Swiss-Prot
Match: CSPL7_POPTR (CASP-like protein 1E1 OS=Populus trichocarpa GN=POPTRDRAFT_820934 PE=3 SV=2) HSP 1 Score: 166.0 bits (419), Expect = 4.2e-40 Identity = 83/179 (46.37%), Postives = 122/179 (68.16%), Query Frame = 1
BLAST of Cucsa.253540 vs. TrEMBL
Match: A0A0A0LAI6_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_3G151490 PE=3 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 4.4e-105 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1
BLAST of Cucsa.253540 vs. TrEMBL
Match: A0A0A0L8Y1_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_3G151500 PE=3 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 1.2e-54 Identity = 110/167 (65.87%), Postives = 138/167 (82.63%), Query Frame = 1
BLAST of Cucsa.253540 vs. TrEMBL
Match: M5Y5A4_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa011729mg PE=3 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.6e-43 Identity = 90/194 (46.39%), Postives = 131/194 (67.53%), Query Frame = 1
BLAST of Cucsa.253540 vs. TrEMBL
Match: A0A0R0F6M4_SOYBN (CASP-like protein OS=Glycine max GN=GLYMA_17G023100 PE=3 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 2.8e-43 Identity = 88/164 (53.66%), Postives = 120/164 (73.17%), Query Frame = 1
BLAST of Cucsa.253540 vs. TrEMBL
Match: A0A0B2P761_GLYSO (CASP-like protein OS=Glycine soja GN=glysoja_004415 PE=3 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 2.8e-43 Identity = 88/164 (53.66%), Postives = 120/164 (73.17%), Query Frame = 1
BLAST of Cucsa.253540 vs. TAIR10
Match: AT4G15630.1 (AT4G15630.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 156.8 bits (395), Expect = 1.4e-38 Identity = 84/189 (44.44%), Postives = 123/189 (65.08%), Query Frame = 1
BLAST of Cucsa.253540 vs. TAIR10
Match: AT4G15620.1 (AT4G15620.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 156.8 bits (395), Expect = 1.4e-38 Identity = 86/189 (45.50%), Postives = 122/189 (64.55%), Query Frame = 1
BLAST of Cucsa.253540 vs. TAIR10
Match: AT3G06390.1 (AT3G06390.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 88.2 bits (217), Expect = 6.2e-18 Identity = 51/165 (30.91%), Postives = 94/165 (56.97%), Query Frame = 1
BLAST of Cucsa.253540 vs. TAIR10
Match: AT4G15610.1 (AT4G15610.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 87.0 bits (214), Expect = 1.4e-17 Identity = 49/168 (29.17%), Postives = 89/168 (52.98%), Query Frame = 1
BLAST of Cucsa.253540 vs. TAIR10
Match: AT5G44550.1 (AT5G44550.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 86.3 bits (212), Expect = 2.4e-17 Identity = 50/171 (29.24%), Postives = 90/171 (52.63%), Query Frame = 1
BLAST of Cucsa.253540 vs. NCBI nr
Match: gi|700201938|gb|KGN57071.1| (hypothetical protein Csa_3G151490 [Cucumis sativus]) HSP 1 Score: 388.7 bits (997), Expect = 6.3e-105 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 1
BLAST of Cucsa.253540 vs. NCBI nr
Match: gi|449432803|ref|XP_004134188.1| (PREDICTED: CASP-like protein 1E2 [Cucumis sativus]) HSP 1 Score: 371.3 bits (952), Expect = 1.0e-99 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1
BLAST of Cucsa.253540 vs. NCBI nr
Match: gi|659076671|ref|XP_008438805.1| (PREDICTED: CASP-like protein 5 [Cucumis melo]) HSP 1 Score: 364.8 bits (935), Expect = 9.8e-98 Identity = 190/201 (94.53%), Postives = 194/201 (96.52%), Query Frame = 1
BLAST of Cucsa.253540 vs. NCBI nr
Match: gi|659076673|ref|XP_008438806.1| (PREDICTED: CASP-like protein 6 [Cucumis melo]) HSP 1 Score: 222.2 bits (565), Expect = 7.8e-55 Identity = 111/168 (66.07%), Postives = 137/168 (81.55%), Query Frame = 1
BLAST of Cucsa.253540 vs. NCBI nr
Match: gi|449432805|ref|XP_004134189.1| (PREDICTED: CASP-like protein 1E1 [Cucumis sativus]) HSP 1 Score: 221.1 bits (562), Expect = 1.7e-54 Identity = 110/167 (65.87%), Postives = 138/167 (82.63%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |