Cucsa.253360 (gene) Cucumber (Gy14) v1

NameCucsa.253360
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold02229 : 1985213 .. 1985410 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCTAGGAAAAATCCTCTTCTTCAAACTAAGTGAAATTAAAACTGGTTTTCTAGCGACGAAAGATGATTGGCATCCAATTTTGTTGACAAAAAAATCCATTACACTATTGGTCTTATCCTCAGAAAACGTAATACACATAGGATTCCTTCTAAAAGCTATTCTGAAATCTTCTTCAGACAATCCCCATTTCCTATAA

mRNA sequence

CCTCTAGGAAAAATCCTCTTCTTCAAACTAAGTGAAATTAAAACTGGTTTTCTAGCGACGAAAGATGATTGGCATCCAATTTTGTTGACAAAAAAATCCATTACACTATTGGTCTTATCCTCAGAAAACGTAATACACATAGGATTCCTTCTAAAAGCTATTCTGAAATCTTCTTCAGACAATCCCCATTTCCTATAA

Coding sequence (CDS)

CCTCTAGGAAAAATCCTCTTCTTCAAACTAAGTGAAATTAAAACTGGTTTTCTAGCGACGAAAGATGATTGGCATCCAATTTTGTTGACAAAAAAATCCATTACACTATTGGTCTTATCCTCAGAAAACGTAATACACATAGGATTCCTTCTAAAAGCTATTCTGAAATCTTCTTCAGACAATCCCCATTTCCTATAA

Protein sequence

PLGKILFFKLSEIKTGFLATKDDWHPILLTKKSITLLVLSSENVIHIGFLLKAILKSSSDNPHFL*
BLAST of Cucsa.253360 vs. TrEMBL
Match: D7T6G8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01620 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.7e-08
Identity = 37/63 (58.73%), Postives = 43/63 (68.25%), Query Frame = 1

Query: 3  GKILFFKLSEIKTGFLATKDDWHPILLTKKSITLLVLSSENVIHIGFLLKAILKSSSDNP 62
          G ILF KL EI TG  A K+D  PILLTKKSI +++LSSE +IH G  +KA   SSSD P
Sbjct: 16 GIILFSKLCEISTGRRAIKEDSLPILLTKKSIVVIILSSEYIIHQGDFVKANRISSSDQP 75

Query: 63 HFL 66
            L
Sbjct: 76 QLL 78

BLAST of Cucsa.253360 vs. TrEMBL
Match: M5XGP0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015555mg PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 5.3e-07
Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 1

Query: 2  LGKILFFKLSEIKTGFLATKDDWHPILLTKKSITLLVLSSENVIHIGFLLKAILKSSSDN 61
          LG ILF KL    TG++A   + HPIL TKK I  ++ SS+ ++H GF LKA + SSSD 
Sbjct: 34 LGIILFSKLKHKITGYVAITLEGHPILFTKKFIPCIIFSSDRIMHCGFFLKAEITSSSDQ 93

Query: 62 P 63
          P
Sbjct: 94 P 94

BLAST of Cucsa.253360 vs. TrEMBL
Match: M5XZP3_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015929mg PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 5.3e-07
Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 1

Query: 2  LGKILFFKLSEIKTGFLATKDDWHPILLTKKSITLLVLSSENVIHIGFLLKAILKSSSDN 61
          LG ILF KL    TG++A   + HPIL TKK I  ++ SS+ ++H GF LKA + SSSD 
Sbjct: 8  LGIILFSKLKHKITGYVAITLEGHPILFTKKFIPCIIFSSDRIMHCGFFLKAEITSSSDQ 67

Query: 62 P 63
          P
Sbjct: 68 P 68

BLAST of Cucsa.253360 vs. NCBI nr
Match: gi|297736888|emb|CBI26089.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 65.1 bits (157), Expect = 5.3e-08
Identity = 37/63 (58.73%), Postives = 43/63 (68.25%), Query Frame = 1

Query: 3  GKILFFKLSEIKTGFLATKDDWHPILLTKKSITLLVLSSENVIHIGFLLKAILKSSSDNP 62
          G ILF KL EI TG  A K+D  PILLTKKSI +++LSSE +IH G  +KA   SSSD P
Sbjct: 16 GIILFSKLCEISTGRRAIKEDSLPILLTKKSIVVIILSSEYIIHQGDFVKANRISSSDQP 75

Query: 63 HFL 66
            L
Sbjct: 76 QLL 78

BLAST of Cucsa.253360 vs. NCBI nr
Match: gi|596222786|ref|XP_007224093.1| (hypothetical protein PRUPE_ppa015555mg [Prunus persica])

HSP 1 Score: 61.2 bits (147), Expect = 7.7e-07
Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 1

Query: 2  LGKILFFKLSEIKTGFLATKDDWHPILLTKKSITLLVLSSENVIHIGFLLKAILKSSSDN 61
          LG ILF KL    TG++A   + HPIL TKK I  ++ SS+ ++H GF LKA + SSSD 
Sbjct: 34 LGIILFSKLKHKITGYVAITLEGHPILFTKKFIPCIIFSSDRIMHCGFFLKAEITSSSDQ 93

Query: 62 P 63
          P
Sbjct: 94 P 94

BLAST of Cucsa.253360 vs. NCBI nr
Match: gi|596290511|ref|XP_007226194.1| (hypothetical protein PRUPE_ppa015929mg, partial [Prunus persica])

HSP 1 Score: 61.2 bits (147), Expect = 7.7e-07
Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 1

Query: 2  LGKILFFKLSEIKTGFLATKDDWHPILLTKKSITLLVLSSENVIHIGFLLKAILKSSSDN 61
          LG ILF KL    TG++A   + HPIL TKK I  ++ SS+ ++H GF LKA + SSSD 
Sbjct: 8  LGIILFSKLKHKITGYVAITLEGHPILFTKKFIPCIIFSSDRIMHCGFFLKAEITSSSDQ 67

Query: 62 P 63
          P
Sbjct: 68 P 68

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
D7T6G8_VITVI3.7e-0858.73Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01620 PE=4 SV=... [more]
M5XGP0_PRUPE5.3e-0750.82Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015555mg PE=4 SV=1[more]
M5XZP3_PRUPE5.3e-0750.82Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015929mg PE=4 S... [more]
Match NameE-valueIdentityDescription
gi|297736888|emb|CBI26089.3|5.3e-0858.73unnamed protein product [Vitis vinifera][more]
gi|596222786|ref|XP_007224093.1|7.7e-0750.82hypothetical protein PRUPE_ppa015555mg [Prunus persica][more]
gi|596290511|ref|XP_007226194.1|7.7e-0750.82hypothetical protein PRUPE_ppa015929mg, partial [Prunus persica][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.253360.1Cucsa.253360.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.253360Silver-seed gourdcarcgyB0083
Cucsa.253360Silver-seed gourdcarcgyB0133
Cucsa.253360Silver-seed gourdcarcgyB0383
Cucsa.253360Silver-seed gourdcarcgyB0681
Cucsa.253360Silver-seed gourdcarcgyB0960
Cucsa.253360Cucumber (Chinese Long) v3cgycucB387
Cucsa.253360Cucumber (Chinese Long) v3cgycucB397
Cucsa.253360Watermelon (97103) v2cgywmbB452
Cucsa.253360Watermelon (97103) v2cgywmbB453
Cucsa.253360Wax gourdcgywgoB505
Cucsa.253360Wax gourdcgywgoB522
Cucsa.253360Cucumber (Gy14) v1cgycgyB108
Cucsa.253360Cucurbita maxima (Rimu)cgycmaB0713
Cucsa.253360Cucurbita maxima (Rimu)cgycmaB0714
Cucsa.253360Cucurbita maxima (Rimu)cgycmaB0709
Cucsa.253360Cucurbita maxima (Rimu)cgycmaB0727
Cucsa.253360Cucurbita maxima (Rimu)cgycmaB0731
Cucsa.253360Cucurbita moschata (Rifu)cgycmoB0700
Cucsa.253360Cucurbita moschata (Rifu)cgycmoB0707
Cucsa.253360Cucurbita moschata (Rifu)cgycmoB0718
Cucsa.253360Cucurbita moschata (Rifu)cgycmoB0720
Cucsa.253360Wild cucumber (PI 183967)cgycpiB383
Cucsa.253360Wild cucumber (PI 183967)cgycpiB392
Cucsa.253360Cucumber (Chinese Long) v2cgycuB366
Cucsa.253360Cucumber (Chinese Long) v2cgycuB373
Cucsa.253360Melon (DHL92) v3.5.1cgymeB430
Cucsa.253360Melon (DHL92) v3.5.1cgymeB439
Cucsa.253360Watermelon (Charleston Gray)cgywcgB451
Cucsa.253360Watermelon (Charleston Gray)cgywcgB453
Cucsa.253360Watermelon (97103) v1cgywmB479
Cucsa.253360Watermelon (97103) v1cgywmB483
Cucsa.253360Cucurbita pepo (Zucchini)cgycpeB0669
Cucsa.253360Cucurbita pepo (Zucchini)cgycpeB0671
Cucsa.253360Cucurbita pepo (Zucchini)cgycpeB0678
Cucsa.253360Cucurbita pepo (Zucchini)cgycpeB0682
Cucsa.253360Cucurbita pepo (Zucchini)cgycpeB0687
Cucsa.253360Bottle gourd (USVL1VR-Ls)cgylsiB412
Cucsa.253360Bottle gourd (USVL1VR-Ls)cgylsiB420
Cucsa.253360Melon (DHL92) v3.6.1cgymedB425
Cucsa.253360Melon (DHL92) v3.6.1cgymedB432