Cucsa.251310 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTCCTCCATTCATGTTCTTATCTCACTCTCTTCTCTTCTTCTTTTCCTATTTTCACGTGAAGGAAGCCGGAGATTGCAATTACAGAGTCAATATAACAACTAGCTGCTCATCCCCTTTCTATATTAGTTCCGAAATCGGCGTTCTCTTTGGGGACGCTCAAGGGAATCAGGTTCGTTTTAATCTTCCCAGATTTTGCTTTTAATTTACTTTGCAATTACTTCATCTCTCGAAGCCTTTAGACTGTAGAGAATAAAATTAAATTAGTTCGTCTTCGTGGTGCTGAAGTTTCATTTAATATGGTTGTTTTGCTAATCTGCTTAGTTAAGGTTTTTTTTTTTTTTAAATATTCGAGTTTTGAATTGCAAGGAAAGAACAAATTACTGCTTTAGAACGTGTGGACTTTCCTTTTCCTTTTTTGAAATTAAAGTTTGAGGAAATATATTCATTAAGATTTCTTGAGAGTCCTTCGTCAATTTGGGATTCTCTTACACTTTCTTATGTTTTATTGAATGAATGGAAATTTGATAGTAGAAACTTATAATCTGTTTTCGAAGATGTTTATTGTTACATGTAATCTATTATTTCATGGTTCGCAATCAATATTATATATCTATCACCTAAAAATAGTTTTGAAACTAAAATCAAAATTTTGCTTAAGAACAGCAGGTAGTAGCACTGTTAGTCATTTAATTCAACTTAAAAATTATATTTCGTCATTACAGTAATCTGTCATCTAATCAGAACCTAAGTACAGTTGGTGGCTTTAAACAATTGGAAACATAGATGTTCATTGAATAGATAAAATGAACAAAATACGTACCATCTATGGTTGGTTTTTATTCAATACTATAATGAAAATGAATGATAAGGACAAAAGAACTTTGTATTTATGTAGTAGGTTTGGTTTTGAACCTATTTTCTCTTAATTTTTCTTTTACAGTGGTTTGGATCTTTCCAAAATGGTTGAATTGTAGATATTTCTAGAACTCTCTTATCGAGACATTTAAAGAAGAAAAGAGAAGGGAAAATAAATTTCTGTTTGACCAACCTTTATAGTTTATGTTTCCTGTTCAAATTATGTTTGGATAAGAATGACTAATTTAGAATTTGAAAAGTAGATATATGAGCCAAAGCTAGAAGTTGAAAGCGGGAATGCATTTAGGAAATGCAGAAAAGACATATTTGAACTGATAGGACCATGCATAGACCAGATATGTTTCTTTTATCTTTACAAGAACGGCTCAGACAATTGGATTCCAGAGATTGTAGAAATCTCCAGCCCTGACATTGACACTGTTAAATACACGTACAACTCCTCAATCCCGAATGACACATGGTATGGCTTTGAAGACTGCCAATACTTCCCGTCACCATCACCGCCACCACCACCGCCTCCATCAGTCCCTTCCACAGCCGGCCCTCTGCCAAGGTGGAAATGGATTGCTTCTCTCATCCCTGTGCTTTTCAGCTGCTTTTTGCTGTGAATGTTATTCTCACTCTGTATTATGGCTTTTGGCTTGGTGGACTAGATATATTTTTTGTTTCTATTTTGATCCACCGCTGTGTTTGTATTTGTACTGTATTTTTGAATTTGATGATCACATGAATAGCTGTGTAATTCAACTTTGATATATGTAGAAATGGATTTGATGGAGTTGTGCTATGATTGTTGAATATGGAGGA actcctccattcatgttcttatctcactctcttctcttcttcttttcctATTTTCACGTGAAGGAAGCCGGAGATTGCAATTACAGAGTCAATATAACAACTAGCTGCTCATCCCCTTTCTATATTAGTTCCGAAATCGGCGTTCTCTTTGGGGACGCTCAAGGGAATCAGATATATGAGCCAAAGCTAGAAGTTGAAAGCGGGAATGCATTTAGGAAATGCAGAAAAGACATATTTGAACTGATAGGACCATGCATAGACCAGATATGTTTCTTTTATCTTTACAAGAACGGCTCAGACAATTGGATTCCAGAGATTGTAGAAATCTCCAGCCCTGACATTGACACTGTTAAATACACGTACAACTCCTCAATCCCGAATGACACATGGTATGGCTTTGAAGACTGCCAATACTTCccgtcaccatcaccgccaccaccaccgcctccatcaGTCCCTTCCACAGCCGGCCCTCTGCCAAGGTGGAAATGGATTGCTTCTCTCATCCCTGTGCTTTTCAGCTGCTTTTTGCTGTGAATGTTATTCTCACTCTGTATTATGGCTTTTGGCTTGGTGGACTAGATATATTTTTTGTTTCTATTTTGATCCACCGCTGTGTTTGTATTTGTACTGTATTTTTGAATTTGATGATCACATGAATAGCTGTGTAATTCAACTTTGATATATGTAGAAATGGATTTGATGGAGTTGTGCTATGATTGTTGAATATGGAGGA ATGTTCTTATCTCACTCTCTTCTCTTCTTCTTTTCCTATTTTCACGTGAAGGAAGCCGGAGATTGCAATTACAGAGTCAATATAACAACTAGCTGCTCATCCCCTTTCTATATTAGTTCCGAAATCGGCGTTCTCTTTGGGGACGCTCAAGGGAATCAGATATATGAGCCAAAGCTAGAAGTTGAAAGCGGGAATGCATTTAGGAAATGCAGAAAAGACATATTTGAACTGATAGGACCATGCATAGACCAGATATGTTTCTTTTATCTTTACAAGAACGGCTCAGACAATTGGATTCCAGAGATTGTAGAAATCTCCAGCCCTGACATTGACACTGTTAAATACACGTACAACTCCTCAATCCCGAATGACACATGGTATGGCTTTGAAGACTGCCAATACTTCCCGTCACCATCACCGCCACCACCACCGCCTCCATCAGTCCCTTCCACAGCCGGCCCTCTGCCAAGGTGGAAATGGATTGCTTCTCTCATCCCTGTGCTTTTCAGCTGCTTTTTGCTGTGA MFLSHSLLFFFSYFHVKEAGDCNYRVNITTSCSSPFYISSEIGVLFGDAQGNQIYEPKLEVESGNAFRKCRKDIFELIGPCIDQICFFYLYKNGSDNWIPEIVEISSPDIDTVKYTYNSSIPNDTWYGFEDCQYFPSPSPPPPPPPSVPSTAGPLPRWKWIASLIPVLFSCFLL*
BLAST of Cucsa.251310 vs. TrEMBL
Match: A0A0A0L8G7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G177970 PE=4 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 7.1e-91 Identity = 160/182 (87.91%), Postives = 164/182 (90.11%), Query Frame = 1
BLAST of Cucsa.251310 vs. TrEMBL
Match: A0A151QN85_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_047784 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 8.3e-31 Identity = 66/157 (42.04%), Postives = 91/157 (57.96%), Query Frame = 1
BLAST of Cucsa.251310 vs. TrEMBL
Match: I3T619_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 2.4e-30 Identity = 63/124 (50.81%), Postives = 81/124 (65.32%), Query Frame = 1
BLAST of Cucsa.251310 vs. TrEMBL
Match: I3SJI5_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 3.1e-30 Identity = 63/124 (50.81%), Postives = 80/124 (64.52%), Query Frame = 1
BLAST of Cucsa.251310 vs. TrEMBL
Match: G7ID53_MEDTR (Embryo-specific protein OS=Medicago truncatula GN=MTR_1g102420 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 3.1e-30 Identity = 63/124 (50.81%), Postives = 80/124 (64.52%), Query Frame = 1
BLAST of Cucsa.251310 vs. TAIR10
Match: AT5G62210.1 (AT5G62210.1 Embryo-specific protein 3, (ATS3)) HSP 1 Score: 122.5 bits (306), Expect = 2.6e-28 Identity = 62/169 (36.69%), Postives = 86/169 (50.89%), Query Frame = 1
BLAST of Cucsa.251310 vs. TAIR10
Match: AT5G62200.1 (AT5G62200.1 Embryo-specific protein 3, (ATS3)) HSP 1 Score: 119.8 bits (299), Expect = 1.7e-27 Identity = 54/116 (46.55%), Postives = 68/116 (58.62%), Query Frame = 1
BLAST of Cucsa.251310 vs. TAIR10
Match: AT5G07190.1 (AT5G07190.1 seed gene 3) HSP 1 Score: 115.9 bits (289), Expect = 2.5e-26 Identity = 64/168 (38.10%), Postives = 93/168 (55.36%), Query Frame = 1
BLAST of Cucsa.251310 vs. TAIR10
Match: AT2G41475.1 (AT2G41475.1 Embryo-specific protein 3, (ATS3)) HSP 1 Score: 114.4 bits (285), Expect = 7.1e-26 Identity = 49/117 (41.88%), Postives = 69/117 (58.97%), Query Frame = 1
BLAST of Cucsa.251310 vs. NCBI nr
Match: gi|449460842|ref|XP_004148153.1| (PREDICTED: uncharacterized protein LOC101215783 [Cucumis sativus]) HSP 1 Score: 341.3 bits (874), Expect = 1.0e-90 Identity = 160/182 (87.91%), Postives = 164/182 (90.11%), Query Frame = 1
BLAST of Cucsa.251310 vs. NCBI nr
Match: gi|659077284|ref|XP_008439124.1| (PREDICTED: uncharacterized protein LOC103484014 isoform X1 [Cucumis melo]) HSP 1 Score: 325.1 bits (832), Expect = 7.6e-86 Identity = 149/163 (91.41%), Postives = 155/163 (95.09%), Query Frame = 1
BLAST of Cucsa.251310 vs. NCBI nr
Match: gi|659077286|ref|XP_008439125.1| (PREDICTED: uncharacterized protein LOC103484014 isoform X2 [Cucumis melo]) HSP 1 Score: 190.7 bits (483), Expect = 2.2e-45 Identity = 99/163 (60.74%), Postives = 106/163 (65.03%), Query Frame = 1
BLAST of Cucsa.251310 vs. NCBI nr
Match: gi|1012171933|ref|XP_015965930.1| (PREDICTED: uncharacterized protein LOC107489692 [Arachis duranensis]) HSP 1 Score: 149.4 bits (376), Expect = 5.7e-33 Identity = 69/149 (46.31%), Postives = 94/149 (63.09%), Query Frame = 1
BLAST of Cucsa.251310 vs. NCBI nr
Match: gi|1021521528|ref|XP_016204151.1| (PREDICTED: uncharacterized protein LOC107644739 [Arachis ipaensis]) HSP 1 Score: 143.3 bits (360), Expect = 4.1e-31 Identity = 67/144 (46.53%), Postives = 91/144 (63.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |