BLAST of Cucsa.248920 vs. Swiss-Prot
Match:
SIGD_ARATH (RNA polymerase sigma factor sigD, chloroplastic OS=Arabidopsis thaliana GN=SIGD PE=2 SV=1)
HSP 1 Score: 324.3 bits (830), Expect = 2.0e-87
Identity = 183/417 (43.88%), Postives = 260/417 (62.35%), Query Frame = 1
Query: 47 LGPNIISNDTLTLPPPPEAAVLAVEAAGEHVLVEAKGFSEDWSSK----------NVEKM 106
+ I + T T+ P P ++ H + S +S K V+++
Sbjct: 1 MATTIPTTATATMCPSPPVPTISPLLRTTHQCQPSPSLSSPFSIKLSTALVCGDTTVDRV 60
Query: 107 EESCVGDGTVAW-----KKKRRKRRKEVG-------------VKAEENWIALSS-GPLRP 166
+S V W K+++R+RR+ VG V+AE I++ G R
Sbjct: 61 VDSSVMIKPEKWGIQSEKRRKRRRRRRVGYERLEPEEEENAGVEAEAETISVPVVGASRS 120
Query: 167 GYLSPKEEAELCLCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRAR 226
G+LS EE +LCL LKE LEN+ T + +E+E + LA G K + ILCR +
Sbjct: 121 GFLSRLEEVQLCLYLKEGAKLENLGTSV---EENEMVSVLLASGRGKKKRSANEILCRRK 180
Query: 227 ESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYW 286
E+R+++ RCY +LV+SIA YQGKGL+LQDL QEG+IGLL+GAERF+P+RG+KLSTY YW
Sbjct: 181 EAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYW 240
Query: 287 WIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHLGIKLSRPPTNKEVAESLKVHLST 346
WI+QAI+RA+ KSRLV+LPG M ++ A++AE +N L KL R P+ +E+AE L +++S
Sbjct: 241 WIKQAILRAIAHKSRLVKLPGSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLNLNVSA 300
Query: 347 IRLVMERSKRPISINQPVNDRSCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNTLSK 406
+RL +ERS+ P+S+++ + +TLQEI+ GPD PE MV R+ MK E+++LL +L+
Sbjct: 301 VRLAVERSRSPVSLDRVASQNGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGSLTA 360
Query: 407 REARILSLYFGLNGEIPQSFEEIGKSLNLSRETIRQTNIATLSKLKKTDVLDYLKDY 435
RE+R+L LYFGLNGE P SFEEIGKSL LSRE +RQ N L KL+ ++ LK Y
Sbjct: 361 RESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLRNVHNVNDLKIY 414
BLAST of Cucsa.248920 vs. Swiss-Prot
Match:
SIGA1_SYNE7 (RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942) GN=sigA1 PE=3 SV=2)
HSP 1 Score: 202.2 bits (513), Expect = 1.2e-50
Identity = 114/339 (33.63%), Postives = 197/339 (58.11%), Query Frame = 1
Query: 97 EESCVGDGTVAWKKKRRKRRKEVGVKAEENWIALSSGPLRPGYLSPKEEAELCLCLKEAV 156
+E VG+ A K + K RK + ++ G +R L EE EL + + +
Sbjct: 64 DEDSVGEDEDAAAKAKAKVRKTYTEDSIRLYLQ-EIGRIR--LLRADEEIELARQIADLL 123
Query: 157 LLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSKLVISIAA 216
LE ++ ++E + P++ + A A+ + R L R R ++D++++ +LV+SIA
Sbjct: 124 ALERIRDELLEQLDRLPSDAEWAAAVDSPLDEFRRRLFRGRRAKDKMVQSNLRLVVSIAK 183
Query: 217 PYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRL 276
Y +GLS QDL QEG++GL++ AE+F+ +G+K STYA WWIRQAI RA+ +SR +RL
Sbjct: 184 KYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRL 243
Query: 277 PGHMGQMVARIAEENNHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVN 336
P H+ + ++RI + L ++ R PT +E+A +++ + +R + + ++ PIS+ P+
Sbjct: 244 PVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIG 303
Query: 337 DRSCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQS 396
L + + D TPE+ V + L++++L+ +L+TLS RE +L L +GL+ ++
Sbjct: 304 KEEDSRLGDFIEA-DGETPEDEVAKNLLREDLEGVLSTLSPRERDVLRLRYGLDDGRMKT 363
Query: 397 FEEIGKSLNLSRETIRQTNIATLSKLKKTDVLDYLKDYL 436
EEIG+ N++RE IRQ L KL+ + LK+Y+
Sbjct: 364 LEEIGQLFNVTRERIRQIEAKALRKLRHPNRNSILKEYI 398
BLAST of Cucsa.248920 vs. Swiss-Prot
Match:
SIGB_ARATH (RNA polymerase sigma factor sigB OS=Arabidopsis thaliana GN=SIGB PE=2 SV=2)
HSP 1 Score: 199.9 bits (507), Expect = 5.7e-50
Identity = 110/347 (31.70%), Postives = 199/347 (57.35%), Query Frame = 1
Query: 90 SKNVEKMEESCVGDGTVAWKKKRRKRRKEVGVKAEENWIALSSGPLRPGYLSPKEEAELC 149
+K +EK T + KK+R +EV ++ +++ + L+ +EE EL
Sbjct: 225 AKGLEKTASGIPSVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSSK--LLTVREEHELS 284
Query: 150 LCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSK 209
+++ + LE ++T + E +PT Q A A G + + + +D++I+ +
Sbjct: 285 AGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDKMIKSNIR 344
Query: 210 LVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDK 269
LVISIA YQG G++LQDL QEG GL++GAE+F+ +G K STYA+WWI+QA+ ++L
Sbjct: 345 LVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSD 404
Query: 270 KSRLVRLPGHMGQMVARIAEENNHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPI 329
+SR++RLP HM + R+ E L + + P N+E+AE+ + + + V+ K P
Sbjct: 405 QSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPR 464
Query: 330 SINQPVNDRSCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNTLSKREARILSLYFGL 389
S++Q + L E++ P+ +T E++++++ M+Q+L ++L++L RE +++ FG+
Sbjct: 465 SLDQKIGMNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTREKQVIRWRFGM 524
Query: 390 NGEIPQSFEEIGKSLNLSRETIRQTNIATLSKLKKTDVLDYLKDYLV 437
++ +EIG+ + +SRE +RQ + KLK ++L+ YLV
Sbjct: 525 EDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLV 569
BLAST of Cucsa.248920 vs. Swiss-Prot
Match:
SIGA_NOSS1 (RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=sigA PE=3 SV=1)
HSP 1 Score: 198.7 bits (504), Expect = 1.3e-49
Identity = 111/339 (32.74%), Postives = 193/339 (56.93%), Query Frame = 1
Query: 97 EESCVGDGTVAWKKKRRKRRKEVGVKAEENWIALSSGPLRPGYLSPKEEAELCLCLKEAV 156
+E G A ++R + +K+ + G +R L EE EL + + +
Sbjct: 54 DEDDAKSGKAAKSRRRTQSKKKHYTEDSIRLYLQEIGRIR--LLRADEEIELARKIADLL 113
Query: 157 LLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSKLVISIAA 216
LE V+ R+ E E +P + + A A+ L R ++D++++ +LV+SIA
Sbjct: 114 ELERVRERLSEKLERDPRDSEWAEAVQLPLPAFRYRLHIGRRAKDKMVQSNLRLVVSIAK 173
Query: 217 PYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRL 276
Y +GLS QDL QEG++GL++ AE+F+ +G+K STYA WWIRQAI RA+ +SR +RL
Sbjct: 174 KYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRL 233
Query: 277 PGHMGQMVARIAEENNHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVN 336
P H+ + ++RI + L ++ R PT +E+A +++ + +R + + ++ PIS+ P+
Sbjct: 234 PVHLYETISRIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIG 293
Query: 337 DRSCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQS 396
L + + D TPE+ V + L++++L+++L++LS RE +L L +GL+ ++
Sbjct: 294 KEEDSRLGDFIES-DGETPEDQVSKNLLREDLEKVLDSLSPRERDVLRLRYGLDDGRMKT 353
Query: 397 FEEIGKSLNLSRETIRQTNIATLSKLKKTDVLDYLKDYL 436
EEIG+ N++RE IRQ L KL+ + LK+Y+
Sbjct: 354 LEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSVLKEYI 389
BLAST of Cucsa.248920 vs. Swiss-Prot
Match:
SIGF_ARATH (RNA polymerase sigma factor sigF, chloroplastic OS=Arabidopsis thaliana GN=SIGF PE=1 SV=1)
HSP 1 Score: 197.6 bits (501), Expect = 2.8e-49
Identity = 114/335 (34.03%), Postives = 187/335 (55.82%), Query Frame = 1
Query: 90 SKNVEKMEESCVGDGTVAWKKKRRKRRKEVGVKAEENWIALSSGPLRPGYLSPKEEAELC 149
+KN + + V D +K K++ + G ++ GP L+ KEEAEL
Sbjct: 198 AKNRRAPKSNDVDDEGYVPQKTSAKKKYKQGADNDDALQLFLWGPETKQLLTAKEEAELI 257
Query: 150 LCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSK 209
++ + LE VKT++ EPT + A AMG S + + R R SR++LI +
Sbjct: 258 SHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSDIHRGRSSREKLITANLR 317
Query: 210 LVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDK 269
LV+ IA YQ +GL+ QDL QEG++GL+K E+F+P G + +TYAYWWIRQ+I +++ +
Sbjct: 318 LVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQ 377
Query: 270 KSRLVRLPGHMGQMVARIAEENNHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPI 329
SR +RLP ++ ++ +++E + + P+ +E+A + V + ++ ++ P+
Sbjct: 378 NSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTEKLDKLLYNTRTPL 437
Query: 330 SINQPVNDRSCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNTLSKREARILSLYFGL 389
S+ QP+ T QEI P TP V ++LM+ ++ LLN LS +E RI+ L FG+
Sbjct: 438 SMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLLNVLSPKERRIIKLRFGI 497
Query: 390 NGEIPQSFEEIGKSLNLSRETIRQTNIATLSKLKK 425
+G +S EIG+ LS+E +RQ L +LK+
Sbjct: 498 DGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQ 532
BLAST of Cucsa.248920 vs. TrEMBL
Match:
A0A0A0L9T0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G687740 PE=4 SV=1)
HSP 1 Score: 865.1 bits (2234), Expect = 3.5e-248
Identity = 436/436 (100.00%), Postives = 436/436 (100.00%), Query Frame = 1
Query: 1 MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGPNIISNDTLTLP 60
MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGPNIISNDTLTLP
Sbjct: 1 MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGPNIISNDTLTLP 60
Query: 61 PPPEAAVLAVEAAGEHVLVEAKGFSEDWSSKNVEKMEESCVGDGTVAWKKKRRKRRKEVG 120
PPPEAAVLAVEAAGEHVLVEAKGFSEDWSSKNVEKMEESCVGDGTVAWKKKRRKRRKEVG
Sbjct: 61 PPPEAAVLAVEAAGEHVLVEAKGFSEDWSSKNVEKMEESCVGDGTVAWKKKRRKRRKEVG 120
Query: 121 VKAEENWIALSSGPLRPGYLSPKEEAELCLCLKEAVLLENVKTRIMETQEHEPTNKQLAI 180
VKAEENWIALSSGPLRPGYLSPKEEAELCLCLKEAVLLENVKTRIMETQEHEPTNKQLAI
Sbjct: 121 VKAEENWIALSSGPLRPGYLSPKEEAELCLCLKEAVLLENVKTRIMETQEHEPTNKQLAI 180
Query: 181 AMGTKSGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGA 240
AMGTKSGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGA
Sbjct: 181 AMGTKSGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGA 240
Query: 241 ERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHLGIKLSR 300
ERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHLGIKLSR
Sbjct: 241 ERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHLGIKLSR 300
Query: 301 PPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGPDNLTPENMVM 360
PPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGPDNLTPENMVM
Sbjct: 301 PPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGPDNLTPENMVM 360
Query: 361 RKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRETIRQTNIATLS 420
RKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRETIRQTNIATLS
Sbjct: 361 RKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRETIRQTNIATLS 420
Query: 421 KLKKTDVLDYLKDYLV 437
KLKKTDVLDYLKDYLV
Sbjct: 421 KLKKTDVLDYLKDYLV 436
BLAST of Cucsa.248920 vs. TrEMBL
Match:
M5XMX5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017025mg PE=4 SV=1)
HSP 1 Score: 426.0 bits (1094), Expect = 5.5e-116
Identity = 232/446 (52.02%), Postives = 309/446 (69.28%), Query Frame = 1
Query: 1 MATTSSLCSLPAQSPTLPSISLSSLP--SLKTHLPQQPHFPFPPFSTKLGPNIISNDTLT 60
MA T+S+CS P Q P LP++SL ++P LKTH P Q H PFP S+K G N++SND L
Sbjct: 1 MAITTSICSSPNQPPILPTLSLPTIPFTPLKTHHPLQLHLPFPSSSSKSGGNLVSNDALA 60
Query: 61 LPPPPEAAVLA---VEAAGEHVLVEAKGFSEDWSSKNVEKMEESCVGDGTVAWKKKRRKR 120
+ EA VLA VEAA + V V + E WS E G VA +K+RRKR
Sbjct: 61 IAAAAEALVLARAAVEAAIDAVAV-TEDIGEVWSC-----WESGNESGGLVARRKRRRKR 120
Query: 121 RKEVGVKAEENWIALSSGPLRPGY-----LSPKEEAELCLCLKEAVLLENVKTRIMETQE 180
RK + EE + G + G+ LSP+EEAE CL LKE LE+ + R++E Q+
Sbjct: 121 RKGLEALDEEMKRDVEDGMVSFGFVRYEHLSPREEAECCLSLKEGARLESERFRVVEAQK 180
Query: 181 HEPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQ 240
HEPT+KQLA AMG K ID++LC+ RES++++IR Y LV+S+A+ YQGKGLS QDL Q
Sbjct: 181 HEPTSKQLAKAMGMKMRSIDKVLCKRRESQEKIIRSYRGLVVSVASSYQGKGLSFQDLIQ 240
Query: 241 EGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEE 300
EG+IGLL+GAE+F+ R KLSTY YWWIRQAIIRA++ KSR++RLPGH+ M+A+I +
Sbjct: 241 EGSIGLLRGAEKFDHEREWKLSTYVYWWIRQAIIRAIENKSRIIRLPGHVCGMMAKITKA 300
Query: 301 NNHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGP 360
N L + R P++ E+AE +KV+ ST++LV ERS+ PIS+++ R +TLQEI+ GP
Sbjct: 301 QNSLNQRFQRLPSHDEIAEVIKVNASTVKLVCERSRPPISLDRVATVRGSMTLQEIIQGP 360
Query: 361 DNLTPENMVMRKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRET 420
+ + PE M++R+LMKQE+++LL TLS REA +L L+FGLNGE PQSFEEIG+ L LSRE
Sbjct: 361 EEMMPEKMLIRQLMKQEVEKLLKTLSDREANVLRLHFGLNGESPQSFEEIGRLLKLSRER 420
Query: 421 IRQTNIATLSKLKKTDVLDYLKDYLV 437
+RQ N LSKL++T +LD LK Y+V
Sbjct: 421 VRQINGIALSKLRQTSILDNLKLYIV 440
BLAST of Cucsa.248920 vs. TrEMBL
Match:
W9RTK4_9ROSA (RNA polymerase sigma factor rpoD OS=Morus notabilis GN=L484_007937 PE=4 SV=1)
HSP 1 Score: 394.8 bits (1013), Expect = 1.4e-106
Identity = 209/440 (47.50%), Postives = 299/440 (67.95%), Query Frame = 1
Query: 1 MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGPNIISNDTLTLP 60
MA T+S+CS P+ P LP++SL ++P+ P +K+G N++SND L +
Sbjct: 1 MAVTTSMCSSPSHPPNLPTLSLPTIPA--------------PSPSKVGVNLVSNDALIVA 60
Query: 61 PPPEAAVLAVEAA--GEHVLVEAKGFSEDWSSKNVEKMEESCVGDGTVAWKKKRRKRRKE 120
EA LA AA L EA E WS ++ ++K+RKR K
Sbjct: 61 AAAEAVTLARAAAKAARDALAEAASVGEVWSGNKSSEL----------TMRRKKRKRGKT 120
Query: 121 VGV-----KAEENWIALSSGPLRPGYLSPKEEAELCLCLKEAVLLENVKTRIMETQEHEP 180
+ + K++ + S GP++ GYLSP+EEAE CL LKE LE + R+ +++HEP
Sbjct: 121 LELLDTDEKSDGEDMRFSIGPMKLGYLSPREEAECCLILKEGAKLEATRLRMTNSEDHEP 180
Query: 181 TNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGN 240
T+K+LA AMG + ID++LC RES++R+ R Y +LV+S+AA YQGKGLS DL QEG+
Sbjct: 181 TSKELAKAMGMEMRSIDKMLCDKRESQERISRSYRRLVVSVAAGYQGKGLSFPDLIQEGS 240
Query: 241 IGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNH 300
+GLL+GA++F+P RG+KLSTY YWWIRQAIIRA++ KSR+VRLPG+M +VA++ E NN
Sbjct: 241 VGLLRGAQKFDPQRGNKLSTYVYWWIRQAIIRAIENKSRVVRLPGNMCGIVAKVTEANNV 300
Query: 301 LGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGPDNL 360
L +L R PT E+A+ + VH+ST+RLV ER + PIS+++ + +R C+TLQEI+PGP+ +
Sbjct: 301 LNKRLRRFPTYDEIAQVVGVHVSTVRLVSERIRPPISLDRAITERGCMTLQEIIPGPEEI 360
Query: 361 TPENMVMRKLMKQELKRLLNT-LSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRETIR 420
+PE MV ++LMKQE+++LL T LS REA +L L+FGL+G+IP S EEIG+ L LSRE IR
Sbjct: 361 SPEKMVRKQLMKQEIEKLLKTVLSDREANVLRLHFGLSGDIPLSCEEIGRLLKLSRERIR 416
Query: 421 QTNIATLSKLKKTDVLDYLK 433
Q N LSKL++T++++ L+
Sbjct: 421 QINGIALSKLQQTNIVNDLR 416
BLAST of Cucsa.248920 vs. TrEMBL
Match:
D7T380_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g00190 PE=4 SV=1)
HSP 1 Score: 372.1 bits (954), Expect = 9.4e-100
Identity = 184/307 (59.93%), Postives = 237/307 (77.20%), Query Frame = 1
Query: 130 LSSGPLRPGYLSPKEEAELCLCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCI 189
+S G R L+P+EEAE CLCLKE LE + RI ET+EHEPT+ Q A A+G K +
Sbjct: 13 VSFGAARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSL 72
Query: 190 DRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGH 249
D++LC RESR+R+ + Y +LV+SIAA YQGKGLSLQDL QEG+IGLL+GAERF+P+RG+
Sbjct: 73 DKMLCNGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGY 132
Query: 250 KLSTYAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHLGIKLSRPPTNKEVAE 309
KLSTY YWWIRQAI+RA+ KSR++RLPG + +MVA+IAE L +L R PT E+AE
Sbjct: 133 KLSTYVYWWIRQAIVRAIANKSRIIRLPGSICEMVAKIAEARTVLSRRLRRLPTYDEIAE 192
Query: 310 SLKVHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGPDNLTPENMVMRKLMKQELK 369
+ V++ST+RLV ERS+ PIS++Q V + C+TLQEI+PGPD TP+ MV R+LMKQE++
Sbjct: 193 FIDVNVSTVRLVSERSRTPISVDQAVTSQGCMTLQEIIPGPDETTPQKMVKRQLMKQEVE 252
Query: 370 RLLNTLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRETIRQTNIATLSKLKKTDVLD 429
R LNTL +REA IL LYFG+NGE P SFEEIG+ + LSRE +RQ N LSKL++T V+D
Sbjct: 253 RALNTLCEREAYILRLYFGINGETPLSFEEIGRLMKLSRERVRQINSIALSKLRQTSVVD 312
Query: 430 YLKDYLV 437
YLK Y++
Sbjct: 313 YLKLYMM 319
BLAST of Cucsa.248920 vs. TrEMBL
Match:
A0A0G2STQ4_9ROSI (Sigma factor OS=Hypseocharis bilobata GN=sig4 PE=2 SV=1)
HSP 1 Score: 362.5 bits (929), Expect = 7.4e-97
Identity = 212/446 (47.53%), Postives = 289/446 (64.80%), Query Frame = 1
Query: 1 MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGPNIISNDTLTLP 60
MA + S P+ SPTLP+ISLSS KTH H P +K N++SN+ LT+
Sbjct: 1 MAIATVCSSSPSCSPTLPTISLSSF---KTH----HHQSIPSTPSKFAVNLVSNEPLTIA 60
Query: 61 PPPEAAVLA---VEAAGEHVLVEAKG------FSEDWSSKNVEKMEESCVGDGTVAWKKK 120
EA LA +EAA E +V + E W +E+ E D A +
Sbjct: 61 EAAEAVALASASLEAAREAAMVAYESGEVGLCCGEGWGE--LERNES----DWLKARMTR 120
Query: 121 RRKRRKEVGVKAEENWIALSSGPL----RPGYLSPKEEAELCLCLKEAVLLENVKTRIME 180
RRKRRK + + EN PL + G+L+PK+EAE C+CLKE LE + ++ E
Sbjct: 121 RRKRRKRL--EGRENGEEDEEVPLIRSVKSGHLTPKQEAEFCMCLKEGARLEAQRRKLAE 180
Query: 181 TQEHEPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQD 240
+ EP+ KQLA+AMG K IDRILC R S++ +IR Y LV+SIA YQG+GLSLQD
Sbjct: 181 ACKQEPSLKQLAMAMGMKKRNIDRILCNRRVSQETIIRTYRGLVVSIAIGYQGRGLSLQD 240
Query: 241 LTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARI 300
L Q G+IGLL+GAERF+PNRG+KLSTY YWW+RQAI++A+ SRL+RLPG + M+ +I
Sbjct: 241 LIQAGSIGLLRGAERFDPNRGYKLSTYVYWWVRQAIVKAVANDSRLIRLPGSVCDMLVKI 300
Query: 301 AEENNHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQP-VNDRSCLTLQEI 360
AE N L I+L R P+ E+AE L V +ST+RL+ RS+ PIS+++ V D+ C+TLQ+I
Sbjct: 301 AEAKNTLSIRLRRLPSYDEIAELLNVQVSTVRLICRRSRPPISLDRRIVTDQGCMTLQDI 360
Query: 361 MPGPDNLTPENMVMRKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSFEEIGKSLNL 420
+PGPD TPE ++ ++L+KQE+++LLNTLS+RE+ IL L +GL+G P+S EEIG LNL
Sbjct: 361 IPGPDERTPEKILKKQLIKQEVEKLLNTLSERESCILRLRYGLDGITPRSCEEIGIILNL 420
Query: 421 SRETIRQTNIATLSKLKKTDVLDYLK 433
SRE +RQ L+KL+++ + D LK
Sbjct: 421 SRERVRQIKNIALTKLRESSLADNLK 431
BLAST of Cucsa.248920 vs. TAIR10
Match:
AT5G13730.1 (AT5G13730.1 sigma factor 4)
HSP 1 Score: 324.3 bits (830), Expect = 1.1e-88
Identity = 183/417 (43.88%), Postives = 260/417 (62.35%), Query Frame = 1
Query: 47 LGPNIISNDTLTLPPPPEAAVLAVEAAGEHVLVEAKGFSEDWSSK----------NVEKM 106
+ I + T T+ P P ++ H + S +S K V+++
Sbjct: 1 MATTIPTTATATMCPSPPVPTISPLLRTTHQCQPSPSLSSPFSIKLSTALVCGDTTVDRV 60
Query: 107 EESCVGDGTVAW-----KKKRRKRRKEVG-------------VKAEENWIALSS-GPLRP 166
+S V W K+++R+RR+ VG V+AE I++ G R
Sbjct: 61 VDSSVMIKPEKWGIQSEKRRKRRRRRRVGYERLEPEEEENAGVEAEAETISVPVVGASRS 120
Query: 167 GYLSPKEEAELCLCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRAR 226
G+LS EE +LCL LKE LEN+ T + +E+E + LA G K + ILCR +
Sbjct: 121 GFLSRLEEVQLCLYLKEGAKLENLGTSV---EENEMVSVLLASGRGKKKRSANEILCRRK 180
Query: 227 ESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYW 286
E+R+++ RCY +LV+SIA YQGKGL+LQDL QEG+IGLL+GAERF+P+RG+KLSTY YW
Sbjct: 181 EAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYW 240
Query: 287 WIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHLGIKLSRPPTNKEVAESLKVHLST 346
WI+QAI+RA+ KSRLV+LPG M ++ A++AE +N L KL R P+ +E+AE L +++S
Sbjct: 241 WIKQAILRAIAHKSRLVKLPGSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLNLNVSA 300
Query: 347 IRLVMERSKRPISINQPVNDRSCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNTLSK 406
+RL +ERS+ P+S+++ + +TLQEI+ GPD PE MV R+ MK E+++LL +L+
Sbjct: 301 VRLAVERSRSPVSLDRVASQNGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGSLTA 360
Query: 407 REARILSLYFGLNGEIPQSFEEIGKSLNLSRETIRQTNIATLSKLKKTDVLDYLKDY 435
RE+R+L LYFGLNGE P SFEEIGKSL LSRE +RQ N L KL+ ++ LK Y
Sbjct: 361 RESRVLGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLRNVHNVNDLKIY 414
BLAST of Cucsa.248920 vs. TAIR10
Match:
AT1G08540.1 (AT1G08540.1 RNApolymerase sigma subunit 2)
HSP 1 Score: 199.9 bits (507), Expect = 3.2e-51
Identity = 110/347 (31.70%), Postives = 199/347 (57.35%), Query Frame = 1
Query: 90 SKNVEKMEESCVGDGTVAWKKKRRKRRKEVGVKAEENWIALSSGPLRPGYLSPKEEAELC 149
+K +EK T + KK+R +EV ++ +++ + L+ +EE EL
Sbjct: 225 AKGLEKTASGIPSVKTGSSPKKKRLVAQEVDHNDPLRYLRMTTSSSK--LLTVREEHELS 284
Query: 150 LCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSK 209
+++ + LE ++T + E +PT Q A A G + + + +D++I+ +
Sbjct: 285 AGIQDLLKLERLQTELTERSGRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDKMIKSNIR 344
Query: 210 LVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDK 269
LVISIA YQG G++LQDL QEG GL++GAE+F+ +G K STYA+WWI+QA+ ++L
Sbjct: 345 LVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSD 404
Query: 270 KSRLVRLPGHMGQMVARIAEENNHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPI 329
+SR++RLP HM + R+ E L + + P N+E+AE+ + + + V+ K P
Sbjct: 405 QSRMIRLPFHMVEATYRVKEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPR 464
Query: 330 SINQPVNDRSCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNTLSKREARILSLYFGL 389
S++Q + L E++ P+ +T E++++++ M+Q+L ++L++L RE +++ FG+
Sbjct: 465 SLDQKIGMNQNLKPSEVIADPEAVTSEDILIKEFMRQDLDKVLDSLGTREKQVIRWRFGM 524
Query: 390 NGEIPQSFEEIGKSLNLSRETIRQTNIATLSKLKKTDVLDYLKDYLV 437
++ +EIG+ + +SRE +RQ + KLK ++L+ YLV
Sbjct: 525 EDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLV 569
BLAST of Cucsa.248920 vs. TAIR10
Match:
AT2G36990.1 (AT2G36990.1 RNApolymerase sigma-subunit F)
HSP 1 Score: 197.6 bits (501), Expect = 1.6e-50
Identity = 114/335 (34.03%), Postives = 187/335 (55.82%), Query Frame = 1
Query: 90 SKNVEKMEESCVGDGTVAWKKKRRKRRKEVGVKAEENWIALSSGPLRPGYLSPKEEAELC 149
+KN + + V D +K K++ + G ++ GP L+ KEEAEL
Sbjct: 198 AKNRRAPKSNDVDDEGYVPQKTSAKKKYKQGADNDDALQLFLWGPETKQLLTAKEEAELI 257
Query: 150 LCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSK 209
++ + LE VKT++ EPT + A AMG S + + R R SR++LI +
Sbjct: 258 SHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSDIHRGRSSREKLITANLR 317
Query: 210 LVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDK 269
LV+ IA YQ +GL+ QDL QEG++GL+K E+F+P G + +TYAYWWIRQ+I +++ +
Sbjct: 318 LVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQ 377
Query: 270 KSRLVRLPGHMGQMVARIAEENNHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPI 329
SR +RLP ++ ++ +++E + + P+ +E+A + V + ++ ++ P+
Sbjct: 378 NSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTEKLDKLLYNTRTPL 437
Query: 330 SINQPVNDRSCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNTLSKREARILSLYFGL 389
S+ QP+ T QEI P TP V ++LM+ ++ LLN LS +E RI+ L FG+
Sbjct: 438 SMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLLNVLSPKERRIIKLRFGI 497
Query: 390 NGEIPQSFEEIGKSLNLSRETIRQTNIATLSKLKK 425
+G +S EIG+ LS+E +RQ L +LK+
Sbjct: 498 DGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQ 532
BLAST of Cucsa.248920 vs. TAIR10
Match:
AT1G64860.1 (AT1G64860.1 sigma factor A)
HSP 1 Score: 148.3 bits (373), Expect = 1.1e-35
Identity = 111/380 (29.21%), Postives = 183/380 (48.16%), Query Frame = 1
Query: 77 VLVEAKGFSEDWSSKNVEKMEESCVGDGTVAWKKKR-------RKRRKEVGVKAEENWIA 136
+L++ + W+ + + G GT+ KK R++ +G K + N
Sbjct: 115 LLLQKSMLEKSWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTH 174
Query: 137 L------SSGPLRPGY---------LSPKEEAELCLCLKEAVLLENVKTRIMETQEHEPT 196
+ SSG GY LS E L +K + L++ K+R+ + EP+
Sbjct: 175 VKAVSDVSSGKQVRGYVKGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPS 234
Query: 197 NKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNI 256
++QLA+++ + L +R++L +LV+SIA Y G + DL Q G I
Sbjct: 235 DEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLVQGGLI 294
Query: 257 GLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHL 316
GLL+G E+F+ ++G ++STY YWWIRQ + RAL SR +RLP H+ + + I L
Sbjct: 295 GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRL 354
Query: 317 GIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGPDNLT 376
K P ++ +AESL + +R E + S+ DR +PG + +
Sbjct: 355 QEKGITPSIDR-IAESLNMSQKKVRNATEAVSKVFSL-----DRDAFPSLNGLPGETHHS 414
Query: 377 ----------PENMVMRKLMKQELKRLLN-TLSKREARILSLYFGLNGEIPQSFEEIGKS 424
P + +K+E+ +L++ TL +RE I+ LY+GL+ E ++E+I K
Sbjct: 415 YIADTRLENNPWHGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKEC-LTWEDISKR 474
BLAST of Cucsa.248920 vs. TAIR10
Match:
AT5G24120.1 (AT5G24120.1 sigma factor E)
HSP 1 Score: 136.7 bits (343), Expect = 3.4e-32
Identity = 93/306 (30.39%), Postives = 157/306 (51.31%), Query Frame = 1
Query: 137 PGYLSPKEEAELCLCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRA 196
P LS E A L ++ L VK + ++ EP ++A + +G + + +
Sbjct: 217 PPVLSSTEHAWLFKLMQPMKALLEVKDVLQKSLGREPREAEIAGEINMTAGEVKKKIEIG 276
Query: 197 RESRDRLIRCYSKLVISIAAPYQGK---GLSLQDLTQEGNIGLLKGAERFEPNRGHKLST 256
R +R++LI+ +LV+ + Y + G QDL Q G GL+ +RFEP R +LST
Sbjct: 277 RAARNKLIKHNLRLVLFVMNKYFHEFTNGPKFQDLCQAGMRGLITAIDRFEPKRKFRLST 336
Query: 257 YAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHLGIKLSRPPTNKEVAESLKV 316
Y +WIR AIIR++ S R+P + + I + L ++ RPPT EV E LK+
Sbjct: 337 YGLFWIRHAIIRSMTT-SNFTRVPFGLESVRVEIYKAKTELWFEMGRPPTEDEVVERLKI 396
Query: 317 HLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPG---PDNLTPENMVMRKLMKQELKR 376
R V+ +K +S+N + +T +E + G D + N L++ L
Sbjct: 397 TPERYREVLRAAKPVLSLNS----KHSVTQEEFINGITDVDGVGANNSRQPALLRLALDD 456
Query: 377 LLNTLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRETIRQTNIATLSKLKKTDVLDY 436
+L++L +E+ ++ +GL+G+ ++ EI +LN+SRE +R+ + L KLK +DY
Sbjct: 457 VLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRKHEVKALMKLKHQARVDY 516
BLAST of Cucsa.248920 vs. NCBI nr
Match:
gi|449464016|ref|XP_004149725.1| (PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Cucumis sativus])
HSP 1 Score: 865.1 bits (2234), Expect = 5.1e-248
Identity = 436/436 (100.00%), Postives = 436/436 (100.00%), Query Frame = 1
Query: 1 MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGPNIISNDTLTLP 60
MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGPNIISNDTLTLP
Sbjct: 1 MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGPNIISNDTLTLP 60
Query: 61 PPPEAAVLAVEAAGEHVLVEAKGFSEDWSSKNVEKMEESCVGDGTVAWKKKRRKRRKEVG 120
PPPEAAVLAVEAAGEHVLVEAKGFSEDWSSKNVEKMEESCVGDGTVAWKKKRRKRRKEVG
Sbjct: 61 PPPEAAVLAVEAAGEHVLVEAKGFSEDWSSKNVEKMEESCVGDGTVAWKKKRRKRRKEVG 120
Query: 121 VKAEENWIALSSGPLRPGYLSPKEEAELCLCLKEAVLLENVKTRIMETQEHEPTNKQLAI 180
VKAEENWIALSSGPLRPGYLSPKEEAELCLCLKEAVLLENVKTRIMETQEHEPTNKQLAI
Sbjct: 121 VKAEENWIALSSGPLRPGYLSPKEEAELCLCLKEAVLLENVKTRIMETQEHEPTNKQLAI 180
Query: 181 AMGTKSGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGA 240
AMGTKSGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGA
Sbjct: 181 AMGTKSGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGA 240
Query: 241 ERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHLGIKLSR 300
ERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHLGIKLSR
Sbjct: 241 ERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHLGIKLSR 300
Query: 301 PPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGPDNLTPENMVM 360
PPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGPDNLTPENMVM
Sbjct: 301 PPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGPDNLTPENMVM 360
Query: 361 RKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRETIRQTNIATLS 420
RKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRETIRQTNIATLS
Sbjct: 361 RKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRETIRQTNIATLS 420
Query: 421 KLKKTDVLDYLKDYLV 437
KLKKTDVLDYLKDYLV
Sbjct: 421 KLKKTDVLDYLKDYLV 436
BLAST of Cucsa.248920 vs. NCBI nr
Match:
gi|659123751|ref|XP_008461821.1| (PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Cucumis melo])
HSP 1 Score: 808.1 bits (2086), Expect = 7.3e-231
Identity = 404/423 (95.51%), Postives = 416/423 (98.35%), Query Frame = 1
Query: 14 SPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGPNIISNDTLTLPPPPEAAVLAVEAA 73
SPTLPSISLSSLPSLKTHLPQQPHFPFPPFS+KLGPN IS DTLTLPPPPEAAVLAVEAA
Sbjct: 51 SPTLPSISLSSLPSLKTHLPQQPHFPFPPFSSKLGPNFISYDTLTLPPPPEAAVLAVEAA 110
Query: 74 GEHVLVEAKGFSEDWSSKNVEKMEESCVGDGTVAWKKKRRKRRKEVGVKAEENWIALSSG 133
GEHVLVEA+GFSEDWSSKNVE+MEESCVGDGTVAWKKKRRKRRKEVGVKAEENWIALSSG
Sbjct: 111 GEHVLVEARGFSEDWSSKNVERMEESCVGDGTVAWKKKRRKRRKEVGVKAEENWIALSSG 170
Query: 134 PLRPGYLSPKEEAELCLCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRIL 193
PLRPGYLSPKEEAELCLCLKEAVLLE VK+RIMETQEHEPTNKQLAIAMGTK GCIDRIL
Sbjct: 171 PLRPGYLSPKEEAELCLCLKEAVLLEKVKSRIMETQEHEPTNKQLAIAMGTKPGCIDRIL 230
Query: 194 CRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLST 253
CRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEP+RGHKLST
Sbjct: 231 CRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPSRGHKLST 290
Query: 254 YAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHLGIKLSRPPTNKEVAESLKV 313
YAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHLGIKLSRPPTN+EVAESLKV
Sbjct: 291 YAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEENNHLGIKLSRPPTNEEVAESLKV 350
Query: 314 HLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLN 373
+ST+RLVMERSKRPISINQPVNDRSCLTLQEI+PGPDNLTPENMVMRKLMKQELKRLLN
Sbjct: 351 RVSTVRLVMERSKRPISINQPVNDRSCLTLQEIIPGPDNLTPENMVMRKLMKQELKRLLN 410
Query: 374 TLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRETIRQTNIATLSKLKKTDVLDYLKD 433
TLSKREA ILSLYFGLNGEIPQSFEEIGKSLNLSRETIR+ NIATLSKLKKT+VLDY+KD
Sbjct: 411 TLSKREAHILSLYFGLNGEIPQSFEEIGKSLNLSRETIRRINIATLSKLKKTNVLDYIKD 470
Query: 434 YLV 437
YLV
Sbjct: 471 YLV 473
BLAST of Cucsa.248920 vs. NCBI nr
Match:
gi|596025928|ref|XP_007219201.1| (hypothetical protein PRUPE_ppa017025mg [Prunus persica])
HSP 1 Score: 426.0 bits (1094), Expect = 7.9e-116
Identity = 232/446 (52.02%), Postives = 309/446 (69.28%), Query Frame = 1
Query: 1 MATTSSLCSLPAQSPTLPSISLSSLP--SLKTHLPQQPHFPFPPFSTKLGPNIISNDTLT 60
MA T+S+CS P Q P LP++SL ++P LKTH P Q H PFP S+K G N++SND L
Sbjct: 1 MAITTSICSSPNQPPILPTLSLPTIPFTPLKTHHPLQLHLPFPSSSSKSGGNLVSNDALA 60
Query: 61 LPPPPEAAVLA---VEAAGEHVLVEAKGFSEDWSSKNVEKMEESCVGDGTVAWKKKRRKR 120
+ EA VLA VEAA + V V + E WS E G VA +K+RRKR
Sbjct: 61 IAAAAEALVLARAAVEAAIDAVAV-TEDIGEVWSC-----WESGNESGGLVARRKRRRKR 120
Query: 121 RKEVGVKAEENWIALSSGPLRPGY-----LSPKEEAELCLCLKEAVLLENVKTRIMETQE 180
RK + EE + G + G+ LSP+EEAE CL LKE LE+ + R++E Q+
Sbjct: 121 RKGLEALDEEMKRDVEDGMVSFGFVRYEHLSPREEAECCLSLKEGARLESERFRVVEAQK 180
Query: 181 HEPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQ 240
HEPT+KQLA AMG K ID++LC+ RES++++IR Y LV+S+A+ YQGKGLS QDL Q
Sbjct: 181 HEPTSKQLAKAMGMKMRSIDKVLCKRRESQEKIIRSYRGLVVSVASSYQGKGLSFQDLIQ 240
Query: 241 EGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEE 300
EG+IGLL+GAE+F+ R KLSTY YWWIRQAIIRA++ KSR++RLPGH+ M+A+I +
Sbjct: 241 EGSIGLLRGAEKFDHEREWKLSTYVYWWIRQAIIRAIENKSRIIRLPGHVCGMMAKITKA 300
Query: 301 NNHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGP 360
N L + R P++ E+AE +KV+ ST++LV ERS+ PIS+++ R +TLQEI+ GP
Sbjct: 301 QNSLNQRFQRLPSHDEIAEVIKVNASTVKLVCERSRPPISLDRVATVRGSMTLQEIIQGP 360
Query: 361 DNLTPENMVMRKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRET 420
+ + PE M++R+LMKQE+++LL TLS REA +L L+FGLNGE PQSFEEIG+ L LSRE
Sbjct: 361 EEMMPEKMLIRQLMKQEVEKLLKTLSDREANVLRLHFGLNGESPQSFEEIGRLLKLSRER 420
Query: 421 IRQTNIATLSKLKKTDVLDYLKDYLV 437
+RQ N LSKL++T +LD LK Y+V
Sbjct: 421 VRQINGIALSKLRQTSILDNLKLYIV 440
BLAST of Cucsa.248920 vs. NCBI nr
Match:
gi|645251013|ref|XP_008231483.1| (PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Prunus mume])
HSP 1 Score: 422.5 bits (1085), Expect = 8.7e-115
Identity = 232/446 (52.02%), Postives = 309/446 (69.28%), Query Frame = 1
Query: 1 MATTSSLCSLPAQSPTLPSISLSSLP--SLKTHLPQQPHFPFPPFSTKLGPNIISNDTLT 60
MA T+S+CS P Q P LP++SL ++P LKTH P Q H PFP S+K G N++SND L
Sbjct: 1 MAITTSICSSPNQPPILPTLSLPTIPFTPLKTHHPLQLHLPFPSSSSKFGGNLVSNDALA 60
Query: 61 LPPPPEAAVLA---VEAAGEHVLVEAKGFSEDWSSKNVEKMEESCVGDGTVAWKKKRRKR 120
+ EA VLA VEAA + V V + E WS + E ES G VA +K RRKR
Sbjct: 61 IAAAAEALVLARAAVEAAIDAVAVTEE-IGEVWSCR--ENGNES---SGLVARRKMRRKR 120
Query: 121 RKEVGVKAEENWIALSSGPLRPGY-----LSPKEEAELCLCLKEAVLLENVKTRIMETQE 180
RK + EE + G + G+ LSP+EEAE CL LKE LE+ + R++E Q+
Sbjct: 121 RKRLEALDEEMNRDVEDGMVSFGFVRYEHLSPREEAECCLSLKEGARLESERFRVVEAQK 180
Query: 181 HEPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQ 240
HEPT+KQLA AMG K ID++LC+ RES++++IR Y LV+S+A+ YQGKGLS QDL Q
Sbjct: 181 HEPTSKQLAKAMGMKMRSIDKVLCKRRESQEKIIRSYRGLVVSVASSYQGKGLSFQDLIQ 240
Query: 241 EGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEE 300
EG+IGLL+GAE+F+ R KLSTY YWWIRQAIIRA++ KSR++RLPGH+ M+A+I +
Sbjct: 241 EGSIGLLRGAEKFDHERKWKLSTYVYWWIRQAIIRAIENKSRIIRLPGHVCGMMAKITKA 300
Query: 301 NNHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGP 360
N L +L R P++ E+AE +KV+ ST++LV ERS+ PIS+++ R +TLQEI+ GP
Sbjct: 301 QNSLNQRLQRLPSHDELAEVIKVNASTVKLVCERSRPPISLDRVATVRGSMTLQEIIQGP 360
Query: 361 DNLTPENMVMRKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRET 420
+ + PE M++R+LMKQE+++LL TLS REA +L L+FGLNGE PQSFEEIG+ L LSRE
Sbjct: 361 EEMMPEKMLIRQLMKQEVEKLLKTLSDREANVLRLHFGLNGESPQSFEEIGRLLKLSRER 420
Query: 421 IRQTNIATLSKLKKTDVLDYLKDYLV 437
+RQ N LSKL++T LD L + +
Sbjct: 421 VRQINGIALSKLRQTSTLDILYSFSI 440
BLAST of Cucsa.248920 vs. NCBI nr
Match:
gi|1009129566|ref|XP_015881834.1| (PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Ziziphus jujuba])
HSP 1 Score: 418.7 bits (1075), Expect = 1.3e-113
Identity = 229/444 (51.58%), Postives = 306/444 (68.92%), Query Frame = 1
Query: 1 MATTSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGPNIISNDTLTLP 60
MA T+SLCS P SPTLP+ S+S+LPS QP S+K G N++SND L L
Sbjct: 1 MAITTSLCSPPNHSPTLPTFSISNLPSF------QPQSSSSSSSSKFGVNLVSNDALILA 60
Query: 61 PPPEAAVLA---VEAAGEHVLVEAKGFS-EDWSSKNVEKMEESCVGDGTVAWKKKRRKRR 120
EA LA V AA E V A G E W ++ + +G V + +RRKRR
Sbjct: 61 AAAEAVTLARAAVNAAREAVEESAAGVGGEVWIYRDGSE------ANGLVMRRTRRRKRR 120
Query: 121 KEVGVK--AEENWI---ALSSGPLRPGYLSPKEEAELCLCLKEAVLLENVKTRIMETQEH 180
K + + E+ + + SSG ++ GYLS +EE + CL LKE LE + RI + QEH
Sbjct: 121 KNLELLDLEEKGYFENKSFSSGSVKSGYLSRREEVDCCLSLKEGAELEATRIRITDAQEH 180
Query: 181 EPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQE 240
EPT+KQLA A+G + +D++LC R+S++R+ R Y +LV+SIA YQG+GLSLQDL QE
Sbjct: 181 EPTSKQLAKAIGMEMRSVDKMLCDRRDSQERIYRSYRRLVVSIAVGYQGRGLSLQDLIQE 240
Query: 241 GNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRLPGHMGQMVARIAEEN 300
G+IGLL+GA +F+P+RGHKLSTY YWWIRQAIIRA++KKSRLVRLPG+M MVA+IAE
Sbjct: 241 GSIGLLRGAHKFDPDRGHKLSTYVYWWIRQAIIRAIEKKSRLVRLPGNMCMMVAKIAEAK 300
Query: 301 NHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVNDRSCLTLQEIMPGPD 360
N L +L R PT +E+AE++ +H+S I+LV E+S+ PIS+++ V D+ C+ LQEI+ GPD
Sbjct: 301 NDLSRRLRRAPTCEEIAEAVDMHVSIIKLVSEKSRTPISLDRTVTDQGCMRLQEIIAGPD 360
Query: 361 NLTPENMVMRKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSFEEIGKSLNLSRETI 420
PE MVM++LMKQE+K+LL +LS REA +L L+FGLNG+ PQ+FEEIG+ L LSRE +
Sbjct: 361 ETMPEKMVMKRLMKQEVKKLLKSLSDREAHVLRLHFGLNGKSPQTFEEIGRVLKLSRERV 420
Query: 421 RQTNIATLSKLKKTDVLDYLKDYL 436
RQ N LSKL+ T ++D L+ YL
Sbjct: 421 RQINGIALSKLRHTSIVDNLRLYL 432
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| SIGD_ARATH | 2.0e-87 | 43.88 | RNA polymerase sigma factor sigD, chloroplastic OS=Arabidopsis thaliana GN=SIGD ... | [more] |
| SIGA1_SYNE7 | 1.2e-50 | 33.63 | RNA polymerase sigma factor SigA1 OS=Synechococcus elongatus (strain PCC 7942) G... | [more] |
| SIGB_ARATH | 5.7e-50 | 31.70 | RNA polymerase sigma factor sigB OS=Arabidopsis thaliana GN=SIGB PE=2 SV=2 | [more] |
| SIGA_NOSS1 | 1.3e-49 | 32.74 | RNA polymerase sigma factor SigA OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=... | [more] |
| SIGF_ARATH | 2.8e-49 | 34.03 | RNA polymerase sigma factor sigF, chloroplastic OS=Arabidopsis thaliana GN=SIGF ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L9T0_CUCSA | 3.5e-248 | 100.00 | Uncharacterized protein OS=Cucumis sativus GN=Csa_3G687740 PE=4 SV=1 | [more] |
| M5XMX5_PRUPE | 5.5e-116 | 52.02 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017025mg PE=4 SV=1 | [more] |
| W9RTK4_9ROSA | 1.4e-106 | 47.50 | RNA polymerase sigma factor rpoD OS=Morus notabilis GN=L484_007937 PE=4 SV=1 | [more] |
| D7T380_VITVI | 9.4e-100 | 59.93 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g00190 PE=4 SV=... | [more] |
| A0A0G2STQ4_9ROSI | 7.4e-97 | 47.53 | Sigma factor OS=Hypseocharis bilobata GN=sig4 PE=2 SV=1 | [more] |
