Cucsa.248870 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGAAGGGTTTTtCCGTTTAATTTCGGGATTTTTtAGGATTTCGATTGAAACTTTTtCATTTTTGAGGGTTTTGATCAACTGGGTGTTTTGAAATGGGTCGAGGGAAGATTGAAATCAAAAGGATTGAGAATGCTAATAGCAGACAAGTTACATTCTCGAAGAGACGAGCTGGGTTGCTTAAGAAGGCTCAAGAACTTGCTATTCTTTGTGATGCTGAAGTTGCTGTTATTATCTTCTCTAATACTGGCAAGCTTTTCGAGTTTTCTAGTTCTGGGTTTGTGTTTTCTATACACTCCTTGATTCTCGATTCTTGTTTTCCCCCCcTCTCTCTTGCATGTTAGTTGGTACTCTATTTTCTAGAGAATATTGTTGGGTTTTCATCAGATATTGGAGAAATTGAGCTGAATCTCGCGGGGCTGGTGGTTTGGTGTTTTTGTTTGTACATTGCATGTTTCATTTTTCTTGTTTTCAGGCTGTCATTTTGTTTGCTGAATAGAATGTTTCATTCTTGCTCTTCTTCATTGCATATTTTTTtCCTTTTTATTAATGTTTTAGATAGTTTACGGTTTAAAAGAGGAGCCTTTTTAGGCGTCTCTGTTACTTACTTGACTGTAATTAACTTCTTCATTCTATTCTCATTTTTCTCCATGGACACAATACTGTTTTGAATCATTACTCCAAGTTCCACCTTGTAAGTTTAAGTTTAGTGCTGGTGAAATATTTTCATTGATTTTACAGTATATGTCTAAAGCTTTCTAATTGCTGAGCATGCTATATCCCCCTTTCTTAAAATGTCTTACCATGTCTGTGGAACTTGGAAGGCTTATCTGAAGTATCTTATGATTGTTCAACATGTTTTTTGAGGCAGGATCAGAATATAGTTTTTCTTGATATACTCTGAATCGACTTAGACTTAATGTGGTGATCCACAGAAAGTTTTATAATCCAATTGTTGCTCCATTTCTTTTGGTGCTCAACTCTGTTTCATTCATTCTTTCATCACTGCCATTGCTTGTATGGAGTTATGAGGTTTGGCCATATAGTTTGGATCTGGCTTTAGCAATGAGGGAGGAAAATTATGAATGAAATCTATTTCTTTTATGTGGTTTGAAGTTGGGTTTTGTTTCTGACTTTGTTTTCCACTGCTTCATGAATCATGAATCAAACAGAGAATATTTTGCAACACATTTATCAACAGATCCAGTGTATCCAAATATATGTCTTTGCCATCTTGTCACTGTTACATTACGTGCACCAAGTTGTATGGACATTCATTCAAAAGTAAATAATCGATGTCAAAAAATTTAAAAATATATACATGTACATGGATTTTTtCGGATCATTGGAATTAAAaGTTAAATATTTTTTGAAGATAGACTGAAACTTGAAATGTGAAGTGCAGACTGTACATTATCAATTGCTCTCTTTTTATTACAAATGAAGCCTAACTCAATCTATTCTATCCTTCTTTGGGCAGCATGAAGCACACTCTTGCAAGATACAACAAATGTGTAGAATCTTCAGATGCTACAGTAGACGTGCACAAGGTTGAGGTACTGATTATTCCATATTAAGTTAAGTTACAAATGAACTTTCATGGCCTGTGTCTAACAGGTCTCTAAACATTTTAAAAAGGACCCAATAGGTCATTAAACTTTTAATTTTGTGTGAACCGTAGGTCCTTGAACTTTCAATTTTGTATGCAATAAGTTCTTTTAAAAAaTGTATGAATTTATTAAACATAAAATTAAATGTTGAATCATATATTACATTAACTTTTAATTTTGTTTCCAATAGGTATGCCCATTTAAAAGAACTCATTCAAATAGTTAAATGATCTATTAGACAGAAAATTGAAAGTTAAAAAaCTTAAATAGATAGAAAATTGTAAGTTGTGAGACTAATTGGACACCTTTTAAGTTGAGGGACTTGTCTAACACAAATTTTAAAGTGTAGAAACTCAACGTATAACTTTAACATTTAACATTTATGTCATTTAGATAAGGTTGATACCTCAAAACTATTATATTTTCATCACAATTTTACAAAACAAGGTTGATGAGGAGTACGGAAATATTTCTACTTGACACTATTGTTACGGGTTATAACTGCTTGGTTGTTTGTTTACTTAAATGTTCTCGGAAGAAACAATGCATTATTCTTTCTAACAGTATCTCCcCCCCCCccGGCAGCGAGAGCATGAGGAGGTAGACATTCTACGAGAGGAAATAACAACTCTGCAAATGAAACAATTGTATGCCATCCTACTTGGCGCATGATCTTTAAAGTGAAGTTGCATCTTTTATATGTACTTATCATTTTTTTtCCTGTGCAGACAGCTATTGGGAAAGGATCTCACTGGCTTAGGCTTCAAAGAGTTGCAAAACCTGGAGCAACAGCTAAATGAAGGGCTATTACTGGTGAAAGAGAAGAAGGTTCGGGTTTGACCATCCCTTTACCTTTATCTTCCTAAAGTATAAAAGTGATTTTCtGTAACATGGAACTTCAAAAGATTAATTGTACTTTCAAATCTTGATGAACCTTTtATTTCTTTAGGAACAGTTACTGATGGAGCAACTAGAGCAATCAAGGGTACAGGTGACTTAATATATTTTGTGCCATCTGTATAAGACATATGCTTTCAAATTTTGATATTTAAATGAGTTTTAATCCTTGAAAAAATGGAACCTCAGAGAGAGAACTTTGGTGAACAACATGCCAAACCAATGTTTTCGTATTCAGTTTGTTGTTATGATCCATAACAATAGCTTAGAACATGATAATTCACGTTTTGATGGTCAAATAACTCAAGTGGTTATCATTATTAGTGCTTTTGATGACAATTACGGGTGCTCCCCGTGCCCTGCCTCCACTATGCAAATAATAATGAATTCAAAACATAACTACTTTACTTTGATATCTATGCGTGTAGAAGTTAGTTTTTCTTTGGTCAAATTTGCCCTTTGTTAATAGACTCAACTACCTGACTTATAACCCAAGTCATGTGTGACTTATAACCCAATTTCACAAGGCGCAAGCAAAATTTCTGCTAAATGCACAATGATAATTCGAAGATAACAAACCATGGATTTTTATATAAAGTTGACCTTCTAAAACAGATCCTACCGTTGAAACCCTACTTAAACCTAATAACGATCGTGGTGGGAACACAAAACTGCAATCAGACAGTAGTTATGAGAAGAAAATTGTAGATTATTCACAAGTTATGGCATGGTCAGGCTATTTCATCCATGCTAGCTAGAAATCTCTAGGAAACAGGGAATGAGATGACTCATGTTCACATTTTTGTTTCAGGAACAACGAGCAATGCTTGAGAACGAAACTCTGCGGAGACAGGCAAGGAGATGTGTTGATCTAACCTAAGAATCATTATATATTTACTAAGACACAAGTTTTTATAATTTTACCGCACCATGCATTGTAGGTCAATGAGCTTCGGTGTCTGTTTCCGCCGGTTGATTGTCCCCTTCCAGCTTATCTTGAATACTGCTCCCTAGAGCAAAAGAATATTGGCATTAGAAGCCCTGATATGGCCTGCAACTCTGAAATTGAAAGAGGAGATTCAGACACCACCTTGCACTTGGGGTAATGTCTTGCTTTTTAACTGCGTAATGAATTTGTTTTAGTCCTACCTGCATTAATTCTTCTCTAGTTCAATATTATGACATAGTGAGAAAATGGTTTGTTCTTCTCAACAATTCCCTGTCTTCTCTGCTACTGAAAAGATAACATGAAATTGGCAACAACTCTGCTCTTGCAATCTTCCTTCCATTGTATGATTGGTTATGTTTCTAAATTCATCCTCCCTGTTGCTCAGGCTGCCATCTCATGTTTATTGCAAGAGAAAGGAAAGTGAGAGAGATACTCATTCAAATGATTCAGGGGCTCAAATGGGCATATTATGATCTCTCTCTCATTCATTCTGATTAATTAGAATGGACTGCACAGACACTGACGAGACGAACAGTGAAAACCAGTTTCATCTCCACCTTCAGAAACTGCAAATATTCATTAGGTGA CAGAAGGGTTTTTCCGTTTAATTTCGGGATTTTTTAGGATTTCGATTGAAACTTTTTCATTTTTGAGGGTTTTGATCAACTGGGTGTTTTGAAATGGGTCGAGGGAAGATTGAAATCAAAAGGATTGAGAATGCTAATAGCAGACAAGTTACATTCTCGAAGAGACGAGCTGGGTTGCTTAAGAAGGCTCAAGAACTTGCTATTCTTTGTGATGCTGAAGTTGCTGTTATTATCTTCTCTAATACTGGCAAGCTTTTCGAGTTTTCTAGTTCTGGCATGAAGCACACTCTTGCAAGATACAACAAATGTGTAGAATCTTCAGATGCTACAGTAGACGTGCACAAGGTTGAGCGAGAGCATGAGGAGGTAGACATTCTACGAGAGGAAATAACAACTCTGCAAATGAAACAATTACAGCTATTGGGAAAGGATCTCACTGGCTTAGGCTTCAAAGAGTTGCAAAACCTGGAGCAACAGCTAAATGAAGGGCTATTACTGGTGAAAGAGAAGAAGGAACAGTTACTGATGGAGCAACTAGAGCAATCAAGGGTACAGGAACAACGAGCAATGCTTGAGAACGAAACTCTGCGGAGACAGGTCAATGAGCTTCGGTGTCTGTTTCCGCCGGTTGATTGTCCCCTTCCAGCTTATCTTGAATACTGCTCCCTAGAGCAAAAGAATATTGGCATTAGAAGCCCTGATATGGCCTGCAACTCTGAAATTGAAAGAGGAGATTCAGACACCACCTTGCACTTGGGGCTGCCATCTCATGTTTATTGCAAGAGAAAGGAAAGTGAGAGAGATACTCATTCAAATGATTCAGGGGCTCAAATGGGCATATTATGATCTCTCTCTCATTCATTCTGATTAATTAGAATGGACTGCACAGACACTGACGAGACGAACAGTGAAAACCAGTTTCATCTCCACCTTCAGAAACTGCAAATATTCATTAGGTGA ATGGGTCGAGGGAAGATTGAAATCAAAAGGATTGAGAATGCTAATAGCAGACAAGTTACATTCTCGAAGAGACGAGCTGGGTTGCTTAAGAAGGCTCAAGAACTTGCTATTCTTTGTGATGCTGAAGTTGCTGTTATTATCTTCTCTAATACTGGCAAGCTTTTCGAGTTTTCTAGTTCTGGCATGAAGCACACTCTTGCAAGATACAACAAATGTGTAGAATCTTCAGATGCTACAGTAGACGTGCACAAGGTTGAGCGAGAGCATGAGGAGGTAGACATTCTACGAGAGGAAATAACAACTCTGCAAATGAAACAATTACAGCTATTGGGAAAGGATCTCACTGGCTTAGGCTTCAAAGAGTTGCAAAACCTGGAGCAACAGCTAAATGAAGGGCTATTACTGGTGAAAGAGAAGAAGGAACAGTTACTGATGGAGCAACTAGAGCAATCAAGGGTACAGGAACAACGAGCAATGCTTGAGAACGAAACTCTGCGGAGACAGGTCAATGAGCTTCGGTGTCTGTTTCCGCCGGTTGATTGTCCCCTTCCAGCTTATCTTGAATACTGCTCCCTAGAGCAAAAGAATATTGGCATTAGAAGCCCTGATATGGCCTGCAACTCTGAAATTGAAAGAGGAGATTCAGACACCACCTTGCACTTGGGGCTGCCATCTCATGTTTATTGCAAGAGAAAGGAAAGTGAGAGAGATACTCATTCAAATGATTCAGGGGCTCAAATGGGCATATTATGA MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAQELAILCDAEVAVIIFSNTGKLFEFSSSGMKHTLARYNKCVESSDATVDVHKVEREHEEVDILREEITTLQMKQLQLLGKDLTGLGFKELQNLEQQLNEGLLLVKEKKEQLLMEQLEQSRVQEQRAMLENETLRRQVNELRCLFPPVDCPLPAYLEYCSLEQKNIGIRSPDMACNSEIERGDSDTTLHLGLPSHVYCKRKESERDTHSNDSGAQMGIL*
BLAST of Cucsa.248870 vs. Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 5.6e-66 Identity = 140/244 (57.38%), Postives = 180/244 (73.77%), Query Frame = 1
BLAST of Cucsa.248870 vs. Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 7.5e-63 Identity = 139/248 (56.05%), Postives = 177/248 (71.37%), Query Frame = 1
BLAST of Cucsa.248870 vs. Swiss-Prot
Match: AGL18_ARATH (Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana GN=AGL18 PE=2 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 3.8e-46 Identity = 118/267 (44.19%), Postives = 169/267 (63.30%), Query Frame = 1
BLAST of Cucsa.248870 vs. Swiss-Prot
Match: AGL16_ARATH (Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana GN=AGL16 PE=1 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 4.6e-36 Identity = 84/171 (49.12%), Postives = 116/171 (67.84%), Query Frame = 1
BLAST of Cucsa.248870 vs. Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.0e-35 Identity = 82/170 (48.24%), Postives = 116/170 (68.24%), Query Frame = 1
BLAST of Cucsa.248870 vs. TrEMBL
Match: A0A0A0LES9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G686200 PE=4 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 2.0e-102 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 1
BLAST of Cucsa.248870 vs. TrEMBL
Match: V4VHU7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032519mg PE=4 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 8.0e-96 Identity = 189/255 (74.12%), Postives = 216/255 (84.71%), Query Frame = 1
BLAST of Cucsa.248870 vs. TrEMBL
Match: A0A067H6W5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025240mg PE=4 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 2.3e-95 Identity = 188/255 (73.73%), Postives = 215/255 (84.31%), Query Frame = 1
BLAST of Cucsa.248870 vs. TrEMBL
Match: A0A067L5A5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16894 PE=4 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 4.9e-93 Identity = 185/255 (72.55%), Postives = 214/255 (83.92%), Query Frame = 1
BLAST of Cucsa.248870 vs. TrEMBL
Match: G0ZDY2_9ROSI (MADS-box protein AGL15 OS=Dimocarpus longan GN=AGL15 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 2.7e-91 Identity = 179/254 (70.47%), Postives = 213/254 (83.86%), Query Frame = 1
BLAST of Cucsa.248870 vs. TAIR10
Match: AT5G13790.1 (AT5G13790.1 AGAMOUS-like 15) HSP 1 Score: 252.3 bits (643), Expect = 3.1e-67 Identity = 140/244 (57.38%), Postives = 180/244 (73.77%), Query Frame = 1
BLAST of Cucsa.248870 vs. TAIR10
Match: AT3G57390.1 (AT3G57390.1 AGAMOUS-like 18) HSP 1 Score: 186.4 bits (472), Expect = 2.1e-47 Identity = 118/267 (44.19%), Postives = 169/267 (63.30%), Query Frame = 1
BLAST of Cucsa.248870 vs. TAIR10
Match: AT3G57230.1 (AT3G57230.1 AGAMOUS-like 16) HSP 1 Score: 152.9 bits (385), Expect = 2.6e-37 Identity = 84/171 (49.12%), Postives = 116/171 (67.84%), Query Frame = 1
BLAST of Cucsa.248870 vs. TAIR10
Match: AT4G37940.1 (AT4G37940.1 AGAMOUS-like 21) HSP 1 Score: 149.1 bits (375), Expect = 3.8e-36 Identity = 80/173 (46.24%), Postives = 114/173 (65.90%), Query Frame = 1
BLAST of Cucsa.248870 vs. TAIR10
Match: AT2G22630.1 (AT2G22630.1 AGAMOUS-like 17) HSP 1 Score: 147.5 bits (371), Expect = 1.1e-35 Identity = 80/173 (46.24%), Postives = 115/173 (66.47%), Query Frame = 1
BLAST of Cucsa.248870 vs. NCBI nr
Match: gi|778682716|ref|XP_011651760.1| (PREDICTED: agamous-like MADS-box protein AGL15 isoform X1 [Cucumis sativus]) HSP 1 Score: 494.2 bits (1271), Expect = 1.3e-136 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1
BLAST of Cucsa.248870 vs. NCBI nr
Match: gi|659123763|ref|XP_008461827.1| (PREDICTED: agamous-like MADS-box protein AGL15 isoform X2 [Cucumis melo]) HSP 1 Score: 491.5 bits (1264), Expect = 8.7e-136 Identity = 248/250 (99.20%), Postives = 250/250 (100.00%), Query Frame = 1
BLAST of Cucsa.248870 vs. NCBI nr
Match: gi|659123761|ref|XP_008461826.1| (PREDICTED: agamous-like MADS-box protein AGL15 isoform X1 [Cucumis melo]) HSP 1 Score: 486.9 bits (1252), Expect = 2.2e-134 Identity = 248/251 (98.80%), Postives = 250/251 (99.60%), Query Frame = 1
BLAST of Cucsa.248870 vs. NCBI nr
Match: gi|778682719|ref|XP_011651761.1| (PREDICTED: agamous-like MADS-box protein AGL15 isoform X2 [Cucumis sativus]) HSP 1 Score: 485.7 bits (1249), Expect = 4.8e-134 Identity = 248/250 (99.20%), Postives = 248/250 (99.20%), Query Frame = 1
BLAST of Cucsa.248870 vs. NCBI nr
Match: gi|778682721|ref|XP_011651762.1| (PREDICTED: agamous-like MADS-box protein AGL15 isoform X3 [Cucumis sativus]) HSP 1 Score: 485.3 bits (1248), Expect = 6.3e-134 Identity = 248/250 (99.20%), Postives = 248/250 (99.20%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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