Cucsa.244560 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.244560
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionActin-related protein 2/3 complex subunit 4
Locationscaffold02135 : 415387 .. 426284 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTCGGAGTTTTGGAGTTTCGGCGGCATTGTACCAACAATTTCCTACTCTCACCAGTTCACTGCACCATCCAGCCAGTTTTCTTTATCCAAGTTCTCACTTCAGGGCGCTAATCTGATCTCCGAAAACTACTTTCTCTAATTCAGAAATGGTCGGTAGCGAACAATTCTTATTATCCTTGATCTTCGATTCGTTTGAAGTTGTCTATTTGGGTTGTGGTAATCTACCGCTTGAATAATAACGAGATCGTTGCGAATGAAGTTTATTCGTTTTACTTAGCAATGTCCGATATAGCTTACTTTCTTAGTGAAATTGTTGATGCTGATGTAATCGGACGCTTTGAATTCGATTTTCTTTTTCTTTTGCCGATTTTCTTCTTCATTTTGAGATGGTTTGTGGGGGAAGCAAGCTTCACCTTGATGAACTCCTGATTTTGAGATGTGATTTGTTTAGATACTTAATTTTGGAATGAGATTGATCTTTTGTTTTTATTTTGTTTCTTTCTTCTTTTTCTACCTAATTTTCTTTCTGTATGTGTAAACTCAGGCAACTACTTTACGCCTGTATTTGACGTGCATACGAAACACTCTTGAGGCCGCCATGTGCCTTCAGGTATTTGTATCGTTGTCTTGTTGCTGTTTTTTCATTTCATTTTCGTTTGAGTGGTGATTTTTTGCAGTTTGATTTATTATTTCTGTAACCCTCTATTAGGTTCGGGTAAACTTTTCATCCTACGAATTATTTGCCTAACGAACTTCAGGAATGCGATGTTACTGAACGCATTGCTTGTAATTGTTTCTTGAAGACTTAAGTTAATGTAATTTCATTGTAAGTGTGAGTGAAAATACTTCTGTACGCATGTAATTTCCGTTCTGTTCAAAATGCTCTGTGAGAAGGTATATGATAATACATATACAGAGTGGGGGCTTTTGGTAATGTTACATCTCTAAATTTTCTACTTGTAATTGAAGGATAAATTGAACTACCATATTGTTTTCTTTTACCCGCTTACCTCTTTCCTCTAGGAGAAACTTCATAGACATCCGGAATATCCTCCAAGTCACCAGTCTGAATGTTAAGAGAGAGTAGTGAATTCTAAGTATCTTTTGGTATTTACATTGACTTGGGAGTGAATGAAACTTTTCAGCTGTACATGACCAGTTACGTTTGTGTACGGTGATTCTCCCTGCTACTACTCGAATTTTTTTGTTACACTTTGGATATTTGCTTTATTTCTAATACAAAGCTCTTCTTGTTTTCACATGTATATGATGTTTGATCTATAAAACTTTTTTTTTCTCCATATGATTACAGAATTTTCCTTGTCAAGAAGTTGAAAGACACAACAAGCCGGAAGTTGAACTAAAGTATGGATCTTCTAGTAATCTTAAAACCTCTTACTGTATTTATATTAGATATATCCTAAATAGATATATCCTTGCTTGCGAGTCAGTGGAAACCAGAATTGTCTAGGTAATAAGTTTATACATGAGCTCTCTTGCGAGCATTCTAGGGATCACTTATGGAGGTTTTTATCTTGGGTATATCAAATAGCATTTTGCTTATCAGTACTTGCGTAATTATAACACTGTGATTATCATTCTGGTATGATAATAGATAGTAGAATGTTTTTTTTTGTATTAGAAATAATAGCTTCCATTTAGAAAAAAAGAAAGAAAGAATACAAAGGCATACAAAAAACCAGCCCACCAAAACACCTCATCTAAAGAAGGGGGACCGACTAAGTAAAATGTTACCAATGAAATAGTTTCAAAAAGTCTTCGAAATCGAAGCCCAAACGGAAATGTGGAATCTAATCAAGGACCAAGCCTCATTGGTCCCTTTCCTACCATGGAACACCTGGTCATTCCTCTCCCTCCAAATGTTCCAAATAAAAGCACACACCTCGAAAAGCCATATAAACCTCTTTTTCTCTGAAGAGCAAATGGAGGAGGTTCCTCAATCGTCATGCGAATGCTCTGGTGGCCGGCATAGCTAATGCCGAACTTTTTCATAAAAAACTCCACAGGCCCGAGCATATCGACAATTTCGAAAAAGGTGATTAAGGTATTCCTTTGCCTTCTGACAGAGCAAGCAACAAAGGCCCAACAAGTGAAGTCCTCCTCTTAACAAGTCTGTCAACAATGTTACTCGGCCAAACAAAACTTGCCAAATAAAAAACCTAACATACTTTGGAACCTCAGTCCTCCAGACCACGTCGAAAATAGACTCCCTAGGAGGGGATGAATCCAACAACAAATCGAACAAAAACTTACACATATATCCTTGACTCCAAACACGAGCATCCCTCCTTCCCTTCCTAAAGCTACACCCCTCAACCAAAGAAAGAAGAGATGTGACCTCCGTTGTTTCTCAATTGGTCAAATTATGACGAAACCCAAAAGAAAAAGACAGGATTCTCAGACCCAAATAAAAGATCTGACATCTTACAGTTTTTGGAGAAGGATAAATGATAAAGAGGTGGAAATAAAGAGCAAAGGGAACTCTCCCCACCCAAAGATCCTCCCAAAAATACATATCCTTACCATCCCTCACAAAGCAACAAGTAATTCAATTGGAGGGAGCTCAAAAGAGATATCCTTCCAAGGATTGCGATGTGTGTCTTTAACCCCTTTCTCTATCCATTCAAAAGGATGGGTGCCATGCTTACTCACAATAGTAGAATGATTATCACTTGTAACCTGTAGAATGATTATCATTTGTAACCTGTAGAACGATTATCATTTGTAACTTGTAGAATGATTTTCATACGTTTGTAGCTTTACCTCTCTCTTTTCCAAATGGAAAGGTCTTTTGTAACTACTCTTGGGATTCATCCCCTTTGCTTTGTAAGTTCATACCATCAATGAAATTGTTTTCTTCCAAAAGAAAGATTACTATTCTACTGTGTAGGTCATATTTGGTTGCTGCATAGTTTTTTGTCACTTGTCTTACTTAAATTGCATGTTCTGGTTAGTTGAACCCGTGCTGGTAGTTGGTTAATAGCTATCTGTCTTGTGTCTGCTCTTATACACCAATCCCCGAGTACTGTTAGTTTCTTTTGGTTACAACATAATAATTGAAAGGATTTTACTGATTTGTGTTTGCTCTTATTTTTTTGTTCGTTACTCTTTCCAGGACCAGCTCAGAGCTTCTTCTCAATCCTGTAAGTTCATGTCATTAATGAGCATTCCACCTAATTTAGCTGGTTTATCATTTTGTGCTTTGTTTTACTTTTGGGTGGGGGGAGGGGGGTTAGTGGAGGGTGGAGGGTATGTATGTGAAAGGCCTCCAATTATTCACGCATATATGAGGAAGGGTAGAAAGGGAATTACACCAGCGAATATTAATGAGGAATGATTGGAGAAAAGATCGTGCAGGGTAGGGCCCACTAGGGTGAAATGTAGGAAGGCCTATAAATAGATATCGATAGGTATTGGGTAGCTAGGTTAATTTTGTCTTCTTTATGGTGTAAGGCTGCTGTAGTCGAAAGGGGTCTCTATATTGTTTAAGAGAGACTAGTATGTTTTCTTTGCTTGTTTTTCCTTGCTTATCTTTGTATTGTGACCTTGTAATCTCTTTTTGGCTTATATAAATAAAGATACTTAGAGTGCCACCTCTGTTTAGCCATTGTTAGGGTGTTTGGTGTATTATTATTGTTGGTAGCCTAACATTTGGTATCAGAGCTCGAAAACTGGGGGTGGTTACGAGACTCATGGTGCAAAGACAAATCGAGGAAAGAGTTGAGGGAACTGAGAAAGAGATAATGGCCTTGAAGGAAATGCTCATTGAAATGAAGAAATCGATGGAGAGAATGACTGATGAATTAACAGAAAGCCATAGTTACAAAAAAAGAGAAAAGTCTAGAACTTCTGATGGTTCTGTAATGAAGTTAAAAGAAAAAATGGACGATATGGACACCACAAACGAGGCAAACTTAACCACAGTAGATCAAAGTAAATACAAAAAATTGGAAATGCTGATGTTCATGGGAGAAAATTCTGAATCCTGGGTCTATAGGGTCGAACACTTCTTTGAAATCAATAGCCTACCTGAAACAGAGAAGGTCAAGGTGGATATCATAAGTTTTGGACAAGATGAAGTAGACTGGTATATATGGTCTCATAATAGAAAGAAGGTGGAATCGTGGGAGGATTCGAAGGGAAGGATGTTTGAGTTTTTTAAGGACTCGGGCCAGAAGAGCTTAGTTGCACGGTTGATCAGAAGTCAACAAGACGGCTCATACAATGATTACGTGAAGAAATTTCTCAACTATTCAGCTCCCCTACCCCATATGTCTAAGAGTGTACTAAGGGATGTGTTTGTAACCGGACTAGAATCGAACCTTCAAGCCGAAGTCATCAACAGACATCCACAAACCTTGGAAGATTGTATGAAAGAAGCCCAGTTGGTCAACAATAGGAATTTGGCTTTTAAAATTGGCCAAGGCAGAGTGGGGATTGACAAAACAAAGAAAAGGAGAAGGAAACACCGGTAAGAGTCAAGACGGAACAAAGAAGGGAGTACAGAGGAAGACAACATTCCCAATGAAACTGGTAACCATCCCAATTAGAGGCAATTACCAAAAAAATGAACCTTCTATGAAATGACTGTCAGATGCAGAGTTCAGGGCTAGGCTGGACAACGGTCTATGCTTCAAATGTAATGAGACATATTCGCCCGGATATAGATGCATAATGAAGGAAAAAGGGAATTGATGTTATTCATCTTGAATGAAGAGGAGAGTATCGAGGATGAAGGCAGAACAGAGGAAACTACCAAGGAAGTGTTGGAACTGAAACAGATAAACCTCACAGATGGGACAGAAATTGAGCTGTAGACGATCAATGGGTTGACATTTAAAGGAACCATGAAGTTAAAGGGAGAAGTAAGAGGAAAAGATGTGGTAGTGCTAATTGACTGTGGGGCCACCCACAACTTCATACATAATAAGATTGTAGAAGAAAAGAAGTTACCATTGGAAAAGGGGACTCAATTCGGTGTCCCATTGGAGATGGCATGAGATGCAAAGGAAGAGGGCTGTGTAGGAGAATAGAGCTGAGGTTGAAGGAAATCACTGTGGTGGCTGATTTTGTAGTGGTGGCTGATTTTGTAGCAATTGAACTTGGCAATATGGATATAATCCTGGGAATGCAGTGGCTGACACCACATGAACTATGAAAATACACTGGCCTTCCCTAACTATGACATTTTGGATAGGAGCAAAACAAATTAACCTCAAGGGTGATCCATCTCTCATTAGAGCTGAATGCTCTTTGAAAACTATAGAGAAAACTTGGGTAAAGGAGGATCAAAGTTTCCTTTTAGAGCTGTAGAATTATGACATAGAGCTAAGCGATGAATTCGATGAAGAACAAGAAATGAAGGGTGATGAAGAAGAGGCCCCAGTGATAAAACTTTTTTCTGAAGCAATATGCAAACTTATTTGAGAACCCTAGATGGTTACCTCCCAAGAGAGAAGTGGATCACCGCATTCTAATGTTACCAGAACAAAGGCCTGTCAATGTGAGACCATAGAAATTTGGGCATGTCCAAAAAGAAGAAATTGTGAAACTGGTGGCAAAGATGCTACAAAGAGGGGTGTTTAGCCCCAACCGCAGCCCCTACTCCAGCCTAGTGTTTTTAGTTAAAAAGAAGGATGGAGGATGGAGATTCTGTGTAGATTACAGAAAACTAAACCAAGTAACCATATCTGATAAGTTTCCCATACATGTGATTGAAGAGTCGTTGGATGAATTGCACGGGGCCACAGTTTTCTTAAAGCTTGATCTGAAGTCAAGGTATCATCAAATAAGGATGAGAGGAGGACATTGAGAAAACGACTTTCAGAATGCATGAGGGCCACTATGAGTGCATAGTCATGCCTTTCGGCCTCACGAACGCCCCTGCTACCTTTCAATCATTAATGAATTAGGTATTTAAACCCTTTTTAAGACGATGTGTATTAGTTTTTTTTATGACATACTTGTGTATAGCACGGATCTTACTGAACGTGAGAAGCATTTAGGAATGGTGTTTGCGATGACGAGGGATAACCAGTTGTTTGCTAATAGAAAAAATGCGTGATAGCATACTCACAAATCCAATACTTGGGGCACTTGATATCTAATAAGGGAGTAGAGGCCAATGAAGAGTTAAGGACATGGTTAATTGGCCTCATCCTCATCCAAAAGATGTAACAGGGTTGAGAGGTTTTTTAGGCTTGACCGGTTATTATAGAAGATTCGTGAAGGGATATGGTGAGATTGCGGCCCCTTTAACCAAGTTATTGTAGAAGAATTCCTTCCAATGGAATGAAGAAGCTACAGTAGCCTTTGATAAGTTGAAGTTAGCCATGATGACCATACCAGTGTTAGCATTACAGGATTGAAATATGCCTTTCATCATTGAAACCGACGCATCTGGGATTGGTTTAGGACCTGTACTATCCCATAATGGTCATCCTCATCCCATAGCTTTTGTTAGTCAAAAACTATCACCTAGGGCCCAAACAAAATCCATATATGAGAGTGAATTAATGGTGGTAGTTCTTTCAGTGCAGAAATGGAGACATTACCTTTTAGATAAGAAATTTACAATAATATCAGAGGGCTCTGAAATTTCCTTTAAAACAGAGAGAGGTGCAACCTCAATTTTAGAAGTGGCTGACCAAACTCCTAGGATATGATTTTGAAATTCTTTACCAGCTAGGGTTACAAAACAAAGCGGTAGATGCCCTCTTTCGGATAGAACAACCTTTGGAATTGAATACTATGACAACTACTGGTATTGTAAACATGGAAGTAGTAAAGAAGGAGGTCGAAATGGATGAGGATCTCAAACAAATCATAGAAGAGTTGAAGACAAAGCCAGATGAGACAAGTAAGTATCAATGGGACAATGGGAGCCTTACTATACAAAAAGAGAGTAGTACTGTCCAAAACTTCTTCATTGATTCCCACCCTCCTACATACGTTTCATGATTTTGTTTTGGGAGGCCATTCAGGATTCTTAAGGACATATAAAAGAATGAGTGGGAACTGTACTAGAAGGGCATGAAAGCTGATGTTAAGAAATATGTTGAGCAGTGTGAAGTTTGCTAGAGATTTAGTTCGAAGCAATCAAACCAGCTAGGGTTCTACAGCCGATTCCTATTCCTGAGAAAATTTTGGAAGAATGGTCCATGGACTTCATTGAAGGGCTACCCAAAGTGGGAGGGATAAATGTGATCATGGTTGTAGTGGATCGGCTAAGCAAATATTCTAATTTTAGAAGAATGGTCCATGGACTTCATTTAAGGATTACCCAAAGCAGGAGGGATGAATGTGATCATGGTTGTAGTGGATCAGCTAAGCAAATATTCTTATTTCATCACCATGAAACATCCCTTCACTGCTAAACTTGTGGCTGAAGTGTTTATAGATAGGGTTGTGAGCAGACACGGTATACCAAAGTCCATTATATCCGACAGAGATAAGATATTTATCAGCAACTTTTGGAAGGAACTATTCGCTACCATGGGGACCATTTTAAAAAGGAGTACAACCTTCCACCTACAAACAGATGGGCAGATAGAGAGGATAAATCGATGTGTGGAAACATATTTAAGATGCTTCTGTAATGAACGGTGTCAGAAGTGGGATAAATTCATTCCATGGGCTGAATTGTGGTACAGCACAACCTTCCATGCTTCAACAAAAAACAATCCTTTCCAGATTTTGTATGGCAGACAACCCCCCTCCCCCCGTCCTAACAATGAGGTATAAGCTATGCTGAAGAAAAGGGACTTGGCTTTGAATGCATTGAAGGAAAACTTGAATATAGCACAGAATCGAATGAAGAAGATGTCAGACACTAAAAGGAGAGAGCTCAAGTTCAAAATTGGGGATGGGTATACCTTAATTTGAGACCATATCGGCAACGTTCCTTAGCTTGAAAGAGGTGTGAGAAATTGGCACCTAAGTTCTATGGACCCTATAAGATCATTGAAGAAATAGGGGAGTGGCCTATAGACTACAACACCACCTGAAGCATTTATTCATGATGTTTTTCACATCTCCCAACTGAAGCTCAAATTGGGAAATCAACAAGTGGTGCAAATCCAGCAACCAGTATTAATTGAAGAATTCGAACTACACTTGGGCCAAAAACCATACTAGGGATTAGTTGGAATAAAGAATTGGGAGCCAATGAATGGTTGGTGAAATGGAAAGGGCTACCTGAGACTGAGGCTACATGGGAAGCAGTCTATCAGATGAATCAACAATCTCCCACCTTCCACCTTCCACCTTGAGGACAAGGTGAATCTGGAGCCAAGGGGTATTGTAAGGCCCCAATTATTCACACATATATGAGTAAGGGTAGAAAGGGAATTACACCAACGAATATTAATGAGGAATGATTGGAGAAAAGATCGTGCAGGGTAGGGCCCACTGGGTTGAAAGATAGGAAGACCTATAAATAGCTATTGATAGGTATTGGGTAGCTAGGTTAATTTTGTCTTCTTTATGATGTAAGGCTACTGTAGCCGAAAGGGTCTCTATATTGTTTAAGGGAGACTAGTATGTTTTCTTTGCTTGTTTTTCCTTGCTTATCTTTATATTGTCACTTTGTAATCTCTTTTTGGCTTATATATAAATAAAGATACTCAGAGGCGTTTAGCCATTTTTAGGGTGTTTGGTGTGTTATTATTGTTGGTAGCCTAATATTATGTAGCTATTCATGTTGGGCAAAGCTTGTGGAAACAGCAAGCACTTATTTTCTTTGATTTGCAATTAGATTTGGGGAACTGTTAATGTTCCCAATTGGAACACATTTTATCTACTGTGGCATGTCAGCGTCAGTGCCTATGCATAATTTTTTAGTGATCCTATTTTCCTTCCCTCTTTATTTTCTTCAATTGGAGAATCATGTTCATGCAAAGAGCACCCTTGGGAGTTGGGAGTGTTGGGGAGTGACTTTTATATATTTATTTAAGGACACATGTGATCTTGCTACATTATATTGCTCTTGCAGATCTTAATATGTAGAAATGAGTCAGAGAAGTGTTTGATTGAGACATCTATAAACTCTCTCCGTATCAGTCTCAAGGTAATTTTATTCTCTTTGTTTTAGTTTGATGCATTAGTGGCATATGTAGTACCATAAATTCTTTTCTGTCCATTCCTTTGATCCACTTACCTGATGAAACACCATTGAATGTGTACGATTATTATCATAGATTGCCATCAACTTGTTTACAATAATTTGATTTGAATTTTTTCTTGTGCTCAGGTTAAGCAGGCAGATGAACTAGAGAATATCCTAACTAAAAAGTTCCTTCGATTTCTGTCAATGAGGGCAGAAGCTTTCCAGGTGTTGAGAAGAAAACCTTTACAGGTACCGTGATAATGTCTAATCATGACGTTAGCTTTGTGCTTTAGTTTAAGATGATATATTACAGCGACTGTGAACTATTCTTCTAAAAACAGAAGTTAAACTTTCAACTATTGGAGATTATTTATGAATAATCACTTCAAAATACTTGGAACTGTACTACTAGGATGATTGTGTCGTCTGAATCCTCAAGTTTCCACGAAATCATATTTTATTTCTCTTGGAGGGCATGATACTACCCCCAATTGAGAGAGAACTGAAAGGCGAGTTCTAGGTTCATTTTTCTTATACATCTTTGTTGAAGGACATAAGAGATATTCTCCAATTTCATTTATTTTGTTCTCTTATTGCCCGAGTGAATGGTAAAAAAACTGAATCTATAGGCTATAATATTGAGATGCTATTTAGCGACAACTATTTGTGTCTGCATAGCTAGTTGTCTTGGTTTTGGGATGACCTAAAAATAATCTGATTATGTTTTTTCTGGAGAATGTATGTATATATCTTAACAAGCAATATATTATTCAAATGCAAGAAATTGAAAACTGACAAAGAAATGGTGATAAAAAAATAATGTTGTATGTGAAAATGCTGTGTCCAAATATATGTTGTATTAAACCTTTATAACCATGAATGGGTTGTCTTGAAGGGTCAAAGATTCCGGATTAATTATCTCCTGTTTTTTTCTCTTCCCTTCCATATAACTAAAAATAATTATTATAAGCGATAAGCCTCTAATATTAATCCATTCTGATCAATTGTTTTTCCATGAAGAAACTATGTTTTCTTTTCCGATATGAACTACTTCCTCCATAATCGTTTATCTTCTTTACCTGTATTCTAGGCAATATTCCAGATTTGCTATTTTTGTTTGCAAAACATATGTAGTGTTCTTCAGAATTCATCTCTTATTTCTTTTTGGCTTCATTTTACAGGGATACGACATTAGCTTTCTTATAACGAACTATCATTGTGAGGACATGCAGAAGCAAAAACTCATTGATTTTATTGTACAGTTTATGGAGGCAAGATAACACCACCTCAATCAATTTGTAGTTATTTACTTGATTTCCTTTTCTTCTGCTTAATTATCTCTTTGATTTTCTTTTCTCATCAACTGATTTTTCTGTATGCTTTTATCTTATCAAGCCCGTCAATGAAGATACACTACTTCAAAAACTTTCTTGAACTTGTCTTGGAGTTCATAATTGAATATTTCTTTTACGTAAAAATCCTTCTGTCAATTTACTTTGACAACTTCGAACTGTTCTGCACAAATTTAAGAGCTAACATTTCTAGTTCCCTTTTGTGAAACTGTTTATGTAATTATGGAAGAGAAATTTATTGAATCGAGAGCTTGTTGAATAATCCTTTTATTTTCCCTCATTTGTGCAGGATATTGATAAAGAGATTAGTGAACTTAAAATGTCCGTGAACACTCGAGGAAGGCTTGTAGCAACAGAGTTTCTAAAGCAATTCATATGATGTCTCTTTCTCTATCTTGGTAAACTTTCCTTTCCCCTA

mRNA sequence

CGTCGGAGTTTTGGAGTTTCGGCGGCATTGTACCAACAATTTCCTACTCTCACCAGTTCACTGCACCATCCAGCCAGTTTTCTTTATCCAAGTTCTCACTTCAGGGCGCTAATCTGATCTCCGAAAACTACTTTCTCTAATTCAGAAATGGCAACTACTTTACGCCTGTATTTGACGTGCATACGAAACACTCTTGAGGCCGCCATGTGCCTTCAGGAGAAACTTCATAGACATCCGGAATATCCTCCAAGTCACCAGTCTGAATGTTAAGAGAGAGTAGTGAATTCTAAGTATCTTTTGGTATTTACATTGACTTGGGAGTGAATGAAACTTTTCAGCTGTACATGACCAGTTACGTTTGTAATTTTCCTTGTCAAGAAGTTGAAAGACACAACAAGCCGGAAGTTGAACTAAAGACCAGCTCAGAGCTTCTTCTCAATCCTATCTTAATATGTAGAAATGAGTCAGAGAAGTGTTTGATTGAGACATCTATAAACTCTCTCCGTATCAGTCTCAAGGTTAAGCAGGCAGATGAACTAGAGAATATCCTAACTAAAAAGTTCCTTCGATTTCTGTCAATGAGGGCAGAAGCTTTCCAGGTGTTGAGAAGAAAACCTTTACAGGGATACGACATTAGCTTTCTTATAACGAACTATCATTGTGAGGACATGCAGAAGCAAAAACTCATTGATTTTATTGTACAGTTTATGGAGGATATTGATAAAGAGATTAGTGAACTTAAAATGTCCGTGAACACTCGAGGAAGGCTTGTAGCAACAGAGTTTCTAAAGCAATTCATATGATGTCTCTTTCTCTATCTTGGTAAACTTTCCTTTCCCCTA

Coding sequence (CDS)

ATGACCAGTTACGTTTGTAATTTTCCTTGTCAAGAAGTTGAAAGACACAACAAGCCGGAAGTTGAACTAAAGACCAGCTCAGAGCTTCTTCTCAATCCTATCTTAATATGTAGAAATGAGTCAGAGAAGTGTTTGATTGAGACATCTATAAACTCTCTCCGTATCAGTCTCAAGGTTAAGCAGGCAGATGAACTAGAGAATATCCTAACTAAAAAGTTCCTTCGATTTCTGTCAATGAGGGCAGAAGCTTTCCAGGTGTTGAGAAGAAAACCTTTACAGGGATACGACATTAGCTTTCTTATAACGAACTATCATTGTGAGGACATGCAGAAGCAAAAACTCATTGATTTTATTGTACAGTTTATGGAGGATATTGATAAAGAGATTAGTGAACTTAAAATGTCCGTGAACACTCGAGGAAGGCTTGTAGCAACAGAGTTTCTAAAGCAATTCATATGA

Protein sequence

MTSYVCNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITNYHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI*
Homology
[Close]
BLAST of Cucsa.244560 vs. Swiss-Prot
Match: ARPC4_ARATH (Actin-related protein 2/3 complex subunit 4 OS=Arabidopsis thaliana GN=ARPC4 PE=1 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 5.3e-84
Identity = 154/169 (91.12%), Postives = 164/169 (97.04%), Query Frame = 1 

Query: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60
           MA +LRLYL CI+NTLEAAMCLQNFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EK
Sbjct: 1   MANSLRLYLACIKNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITN 120
           CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCE+MQKQKLIDFI+QFMEDI+KEI +LK SVNTRGRLVATEFLKQF+
Sbjct: 121 YHCEEMQKQKLIDFIIQFMEDIEKEIRDLKESVNTRGRLVATEFLKQFM 169

[Close]
BLAST of Cucsa.244560 vs. Swiss-Prot
Match: ARPC4_DICDI (Actin-related protein 2/3 complex subunit 4 OS=Dictyostelium discoideum GN=arcD PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 8.2e-61
Identity = 111/168 (66.07%), Postives = 144/168 (85.71%), Query Frame = 1 

Query: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60
           M+T    YL CIRNTL A+MCLQNF  Q VERHNKPEVE+KTS EL+LNP++I RN++E+
Sbjct: 1   MSTAQVPYLNCIRNTLTASMCLQNFGSQIVERHNKPEVEVKTSKELVLNPVIIARNKNER 60

Query: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITN 120
            LIETSINS+RIS+ +K++DE++ IL KKF+RFL  RAE F +LRRKP++GYDISFL+TN
Sbjct: 61  VLIETSINSIRISVSIKKSDEVDVILAKKFVRFLQQRAENFIILRRKPVEGYDISFLVTN 120

Query: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 169
           +H E+M K KL+DFI+QFMEDID+EIS+LK+++N RGR+VA+E+LK F
Sbjct: 121 FHTENMFKHKLVDFIIQFMEDIDREISDLKLTLNARGRIVASEYLKNF 168

[Close]
BLAST of Cucsa.244560 vs. Swiss-Prot
Match: ARPC4_BOVIN (Actin-related protein 2/3 complex subunit 4 OS=Bos taurus GN=ARPC4 PE=1 SV=3)

HSP 1 Score: 230.3 bits (586), Expect = 1.5e-59
Identity = 111/168 (66.07%), Postives = 137/168 (81.55%), Query Frame = 1 

Query: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60
           M  TLR YL+ +R TL+AA+CL+NF  Q VERHNKPEVE+++S ELLL P+ I RNE EK
Sbjct: 1   MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60

Query: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITN 120
            LIE SINS+R+S+ VKQADE+E IL  KF+RF+ MRAE F +LRRKP++GYDISFLITN
Sbjct: 61  VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120

Query: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 169
           +H E M K KL+DF++ FME+IDKEISE+K+SVN R R+VA EFLK F
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168

[Close]
BLAST of Cucsa.244560 vs. Swiss-Prot
Match: ARPC4_HUMAN (Actin-related protein 2/3 complex subunit 4 OS=Homo sapiens GN=ARPC4 PE=1 SV=3)

HSP 1 Score: 230.3 bits (586), Expect = 1.5e-59
Identity = 111/168 (66.07%), Postives = 137/168 (81.55%), Query Frame = 1 

Query: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60
           M  TLR YL+ +R TL+AA+CL+NF  Q VERHNKPEVE+++S ELLL P+ I RNE EK
Sbjct: 1   MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60

Query: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITN 120
            LIE SINS+R+S+ VKQADE+E IL  KF+RF+ MRAE F +LRRKP++GYDISFLITN
Sbjct: 61  VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120

Query: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 169
           +H E M K KL+DF++ FME+IDKEISE+K+SVN R R+VA EFLK F
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168

[Close]
BLAST of Cucsa.244560 vs. Swiss-Prot
Match: ARPC4_MOUSE (Actin-related protein 2/3 complex subunit 4 OS=Mus musculus GN=Arpc4 PE=1 SV=3)

HSP 1 Score: 230.3 bits (586), Expect = 1.5e-59
Identity = 111/168 (66.07%), Postives = 137/168 (81.55%), Query Frame = 1 

Query: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60
           M  TLR YL+ +R TL+AA+CL+NF  Q VERHNKPEVE+++S ELLL P+ I RNE EK
Sbjct: 1   MTATLRPYLSAVRATLQAALCLENFSSQVVERHNKPEVEVRSSKELLLQPVTISRNEKEK 60

Query: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITN 120
            LIE SINS+R+S+ VKQADE+E IL  KF+RF+ MRAE F +LRRKP++GYDISFLITN
Sbjct: 61  VLIEGSINSVRVSIAVKQADEIEKILCHKFMRFMMMRAENFFILRRKPVEGYDISFLITN 120

Query: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF 169
           +H E M K KL+DF++ FME+IDKEISE+K+SVN R R+VA EFLK F
Sbjct: 121 FHTEQMYKHKLVDFVIHFMEEIDKEISEMKLSVNARARIVAEEFLKNF 168

[Close]
BLAST of Cucsa.244560 vs. TrEMBL
Match: A0A0A0LHM5_CUCSA (Actin-related protein 2/3 complex subunit 4 OS=Cucumis sativus GN=Csa_2G120960 PE=3 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.2e-87
Identity = 167/169 (98.82%), Postives = 168/169 (99.41%), Query Frame = 1 

Query: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60
           MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK
Sbjct: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60

Query: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITN 120
           CLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Sbjct: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 169

[Close]
BLAST of Cucsa.244560 vs. TrEMBL
Match: A0A061EK66_THECC (Actin-related protein 2/3 complex subunit 4 OS=Theobroma cacao GN=TCM_020286 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 5.1e-86
Identity = 163/169 (96.45%), Postives = 167/169 (98.82%), Query Frame = 1 

Query: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60
           MA TLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EK
Sbjct: 1   MANTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITN 120
           CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCE+MQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Sbjct: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 169

[Close]
BLAST of Cucsa.244560 vs. TrEMBL
Match: A0A0S3SX62_PHAAN (Actin-related protein 2/3 complex subunit 4 OS=Vigna angularis var. angularis GN=Vigan.09G089100 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 5.1e-86
Identity = 163/169 (96.45%), Postives = 167/169 (98.82%), Query Frame = 1 

Query: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60
           MA+TLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EK
Sbjct: 1   MASTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITN 120
           CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCEDMQK KLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Sbjct: 121 YHCEDMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 169

[Close]
BLAST of Cucsa.244560 vs. TrEMBL
Match: A0A0L9VSJ2_PHAAN (Actin-related protein 2/3 complex subunit 4 OS=Phaseolus angularis GN=LR48_Vigan11g105800 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 5.1e-86
Identity = 163/169 (96.45%), Postives = 167/169 (98.82%), Query Frame = 1 

Query: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60
           MA+TLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EK
Sbjct: 1   MASTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITN 120
           CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCEDMQK KLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Sbjct: 121 YHCEDMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 169

[Close]
BLAST of Cucsa.244560 vs. TrEMBL
Match: B9RWE0_RICCO (Actin-related protein 2/3 complex subunit 4 OS=Ricinus communis GN=RCOM_1018440 PE=3 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 1.5e-85
Identity = 163/169 (96.45%), Postives = 166/169 (98.22%), Query Frame = 1 

Query: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60
           MA  LRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTS ELLLNPILICRNE+EK
Sbjct: 1   MANPLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPILICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITN 120
           CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPIQGYDISFLITN 120

Query: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCE+MQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Sbjct: 121 YHCEEMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 169

[Close]
BLAST of Cucsa.244560 vs. TAIR10
Match: AT4G14147.2 (AT4G14147.2 protein binding)

HSP 1 Score: 267.3 bits (682), Expect = 6.4e-72
Identity = 138/176 (78.41%), Postives = 151/176 (85.80%), Query Frame = 1 

Query: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60
           MA +LRLYL CI+NTLEAAMCLQNFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EK
Sbjct: 1   MANSLRLYLACIKNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITN 120
           CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEDMQKQKLIDFIVQFMEDIDKE-------ISELKMSVNTRGRLVATEFLKQFI 170
           YHCE+MQKQKLIDFI+QFME   +E       +SE K      G ++ T  +KQ +
Sbjct: 121 YHCEEMQKQKLIDFIIQFMEARYRERNKGLEGVSEYKRKTRCYG-VLETVHVKQLL 175

[Close]
BLAST of Cucsa.244560 vs. NCBI nr
Match: gi|778680040|ref|XP_011651239.1| (PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus])

HSP 1 Score: 333.2 bits (853), Expect = 2.7e-88
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1 

Query: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60
           MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK
Sbjct: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60

Query: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITN 120
           CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITN 120

Query: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Sbjct: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 169

[Close]
BLAST of Cucsa.244560 vs. NCBI nr
Match: gi|778668280|ref|XP_011649071.1| (PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus])

HSP 1 Score: 330.5 bits (846), Expect = 1.7e-87
Identity = 167/169 (98.82%), Postives = 168/169 (99.41%), Query Frame = 1 

Query: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60
           MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK
Sbjct: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60

Query: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITN 120
           CLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Sbjct: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 169

[Close]
BLAST of Cucsa.244560 vs. NCBI nr
Match: gi|659114636|ref|XP_008457157.1| (PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis melo])

HSP 1 Score: 328.9 bits (842), Expect = 5.1e-87
Identity = 166/169 (98.22%), Postives = 168/169 (99.41%), Query Frame = 1 

Query: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60
           MAT+LRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK
Sbjct: 1   MATSLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60

Query: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITN 120
           CLIETSINSLRISLKVKQ DELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Sbjct: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 169

[Close]
BLAST of Cucsa.244560 vs. NCBI nr
Match: gi|659112288|ref|XP_008456148.1| (PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo])

HSP 1 Score: 328.6 bits (841), Expect = 6.6e-87
Identity = 165/169 (97.63%), Postives = 168/169 (99.41%), Query Frame = 1 

Query: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60
           MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK
Sbjct: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60

Query: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITN 120
           CLIETSINSLRISLKV+Q DELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVRQTDELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQF+
Sbjct: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFL 169

[Close]
BLAST of Cucsa.244560 vs. NCBI nr
Match: gi|951019605|ref|XP_014512175.1| (PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Vigna radiata var. radiata])

HSP 1 Score: 325.1 bits (832), Expect = 7.3e-86
Identity = 163/169 (96.45%), Postives = 167/169 (98.82%), Query Frame = 1 

Query: 1   MATTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK 60
           MA+TLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EK
Sbjct: 1   MASTLRLYLTCIRNTLEAAMCLQNFPCQEVERHNKPEVELKTSPELLLNPVLICRNEAEK 60

Query: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPLQGYDISFLITN 120
           CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKP+QGYDISFLITN
Sbjct: 61  CLIETSINSLRISLKVKQADELENILTKKFLRFLSMRAEAFQVLRRKPVQGYDISFLITN 120

Query: 121 YHCEDMQKQKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 170
           YHCEDMQK KLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI
Sbjct: 121 YHCEDMQKHKLIDFIVQFMEDIDKEISELKMSVNTRGRLVATEFLKQFI 169

The following BLAST results are available for this feature:
BLAST of Cucsa.244560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ARPC4_ARATH5.3e-8491.12Actin-related protein 2/3 complex subunit 4 OS=Arabidopsis thaliana GN=ARPC4 PE=... [more]
ARPC4_DICDI8.2e-6166.07Actin-related protein 2/3 complex subunit 4 OS=Dictyostelium discoideum GN=arcD ... [more]
ARPC4_BOVIN1.5e-5966.07Actin-related protein 2/3 complex subunit 4 OS=Bos taurus GN=ARPC4 PE=1 SV=3[more]
ARPC4_HUMAN1.5e-5966.07Actin-related protein 2/3 complex subunit 4 OS=Homo sapiens GN=ARPC4 PE=1 SV=3[more]
ARPC4_MOUSE1.5e-5966.07Actin-related protein 2/3 complex subunit 4 OS=Mus musculus GN=Arpc4 PE=1 SV=3[more]
BLAST of Cucsa.244560 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHM5_CUCSA1.2e-8798.82Actin-related protein 2/3 complex subunit 4 OS=Cucumis sativus GN=Csa_2G120960 P... [more]
A0A061EK66_THECC5.1e-8696.45Actin-related protein 2/3 complex subunit 4 OS=Theobroma cacao GN=TCM_020286 PE=... [more]
A0A0S3SX62_PHAAN5.1e-8696.45Actin-related protein 2/3 complex subunit 4 OS=Vigna angularis var. angularis GN... [more]
A0A0L9VSJ2_PHAAN5.1e-8696.45Actin-related protein 2/3 complex subunit 4 OS=Phaseolus angularis GN=LR48_Vigan... [more]
B9RWE0_RICCO1.5e-8596.45Actin-related protein 2/3 complex subunit 4 OS=Ricinus communis GN=RCOM_1018440 ... [more]
BLAST of Cucsa.244560 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G14147.26.4e-7278.41 protein binding[more]
BLAST of Cucsa.244560 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778680040|ref|XP_011651239.1|2.7e-88100.00PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativ... [more]
gi|778668280|ref|XP_011649071.1|1.7e-8798.82PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativ... [more]
gi|659114636|ref|XP_008457157.1|5.1e-8798.22PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis melo][more]
gi|659112288|ref|XP_008456148.1|6.6e-8797.63PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo][more]
gi|951019605|ref|XP_014512175.1|7.3e-8696.45PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Vigna radiata... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008384ARPC4
IPR008384ARPC4
Vocabulary: Cellular Component
TermDefinition
GO:0005885Arp2/3 protein complex
GO:0015629actin cytoskeleton
GO:0005885Arp2/3 protein complex
GO:0015629actin cytoskeleton
Vocabulary: Biological Process
TermDefinition
GO:0030041actin filament polymerization
GO:0034314Arp2/3 complex-mediated actin nucleation
GO:0030041actin filament polymerization
GO:0034314Arp2/3 complex-mediated actin nucleation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034314 Arp2/3 complex-mediated actin nucleation
biological_process GO:0030041 actin filament polymerization
cellular_component GO:0005885 Arp2/3 protein complex
cellular_component GO:0015629 actin cytoskeleton
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.244560.3Cucsa.244560.3mRNA
Cucsa.244560.2Cucsa.244560.2mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008384Actin-related protein 2/3 complex subunit 4PIRPIRSF039100ARPC4coord: 2..152
score: 6.4
IPR008384Actin-related protein 2/3 complex subunit 4PANTHERPTHR22629ARP2/3 COMPLEX 20 KD SUBUNITcoord: 7..152
score: 4.0E
IPR008384Actin-related protein 2/3 complex subunit 4PFAMPF05856ARPC4coord: 6..150
score: 6.2
NoneNo IPR availableGENE3DG3DSA:3.30.1460.20coord: 5..151
score: 1.5
NoneNo IPR availableunknownSSF69645Arp2/3 complex subunitscoord: 5..151
score: 1.04

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.244560Csa3G200200Cucumber (Chinese Long) v2cgycuB350
Cucsa.244560MELO3C019533Melon (DHL92) v3.5.1cgymeB417
Cucsa.244560CSPI03G18260Wild cucumber (PI 183967)cgycpiB366
Cucsa.244560MELO3C019533.2Melon (DHL92) v3.6.1cgymedB412
Cucsa.244560CsaV3_3G018320Cucumber (Chinese Long) v3cgycucB369
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.244560Wax gourdcgywgoB493
Cucsa.244560Wax gourdcgywgoB494
Cucsa.244560Cucumber (Gy14) v1cgycgyB117
Cucsa.244560Cucurbita maxima (Rimu)cgycmaB0684
Cucsa.244560Cucurbita maxima (Rimu)cgycmaB0685
Cucsa.244560Cucurbita maxima (Rimu)cgycmaB0686
Cucsa.244560Cucurbita maxima (Rimu)cgycmaB0687
Cucsa.244560Cucurbita moschata (Rifu)cgycmoB0684
Cucsa.244560Cucurbita moschata (Rifu)cgycmoB0685
Cucsa.244560Cucurbita moschata (Rifu)cgycmoB0686
Cucsa.244560Cucurbita moschata (Rifu)cgycmoB0687
Cucsa.244560Wild cucumber (PI 183967)cgycpiB367
Cucsa.244560Cucumber (Chinese Long) v2cgycuB351
Cucsa.244560Melon (DHL92) v3.5.1cgymeB416
Cucsa.244560Watermelon (Charleston Gray)cgywcgB432
Cucsa.244560Watermelon (Charleston Gray)cgywcgB433
Cucsa.244560Watermelon (97103) v1cgywmB462
Cucsa.244560Watermelon (97103) v1cgywmB463
Cucsa.244560Cucurbita pepo (Zucchini)cgycpeB0652
Cucsa.244560Cucurbita pepo (Zucchini)cgycpeB0653
Cucsa.244560Cucurbita pepo (Zucchini)cgycpeB0654
Cucsa.244560Bottle gourd (USVL1VR-Ls)cgylsiB403
Cucsa.244560Bottle gourd (USVL1VR-Ls)cgylsiB404
Cucsa.244560Melon (DHL92) v3.6.1cgymedB411
Cucsa.244560Silver-seed gourdcarcgyB0345
Cucsa.244560Silver-seed gourdcarcgyB0436
Cucsa.244560Cucumber (Chinese Long) v3cgycucB370
Cucsa.244560Watermelon (97103) v2cgywmbB434
Cucsa.244560Watermelon (97103) v2cgywmbB435