Cucsa.244530 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.244530
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	scaffold02135 : 397709 .. 398341 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTTTGATTTGCTTCACAAACTTAATTTTGATGATCTTAAACTTGCTCCTTTACCTAGCATTGTGGAAAAACACCTATTTGCTATTGAAGGAACACCACTATTTATTTATAGGAGCTCTGCAATACCTTATTCACACATGTTCGAATATAGCCTATATTGTTAATCATTTTAGTCAATTTCTAAAACACTTCACAGATCTTCATTGGCAAGCTGTGAAATGTGTTTTAAGGTATTTAAGTGGCACACTGACATTTAGCCTACTATTCCAACAAAGTCTCTATCTCTCAATTTTTGCCTATTTAGATTCTGATTTGGCATCTAATATCGATGATCACAAGTTAGTTGTTGCTTGTTGTGTGTTTATTGGAACTAATCTCATTTCCTTGTCTTAAAAAAaCAAGTAAACTACAGTTGCTAGCTTCAATACAAAATCAGAATATCCTGCATTAGCTCATGCTGCTTCGGAGATTATTTGGTTACAACAACTTCTTTTTAAGTTACATGTCTCCTCTTCATTGAAACCAATTCTCTGGTGTGATAATCTCAGTGTAGGTGTCCTTGGCAACAATCTTGTATTTTATGCTTGGATGAAACACATTGAAATTGATGTTCACTTCATTTGGGACCAA

mRNA sequence

ATGTGTTTGATTTGCTTCACAAACTTAATTTTGATGATCTTAAACTTGCTCCTTTACCTAGCATTGTGGAAAAACACCTATTTGCTATTGAAGGAACACCACTATTTATTTATAGGAGCTCtgcaataccttattcacacatgttcgaatatagcctatattgttaatcattttagtcaatttctaaaacacttcacagatcttcattggcaagctgtgaaatgtgttttaaggtatttaagtggcacactgacatttagcctactattccaacaaagtctctatctctcaatttttgcctatttagattctgatttggcatctaatatcgatgatcacaacttcaatacaaaatcagaatatcctgcattagctcatgctgcttcggagattatttggttacaacaacttctttttaagttacatgtctcctcttcattgaaaccaattctctggtgtgataatctcagtgtaggtgtccttggcaacaatcttgtattttatgcttggatgaaacacattgaaattgatgttcacttcatttgggaccaa

Coding sequence (CDS)

ATGTGTTTGATTTGCTTCACAAACTTAATTTTGATGATCTTAAACTTGCTCCTTTACCTAGCATTGTGGAAAAACACCTATTTGCTATTGAAGGAACACCACTATTTATTTATAGGAGCTCTGCAATACCTTATTCACACATGTTCGAATATAGCCTATATTGTTAATCATTTTAGTCAATTTCTAAAACACTTCACAGATCTTCATTGGCAAGCTGTGAAATGTGTTTTAAGGTATTTAAGTGGCACACTGACATTTAGCCTACTATTCCAACAAAGTCTCTATCTCTCAATTTTTGCCTATTTAGATTCTGATTTGGCATCTAATATCGATGATCACAACTTCAATACAAAATCAGAATATCCTGCATTAGCTCATGCTGCTTCGGAGATTATTTGGTTACAACAACTTCTTTTTAAGTTACATGTCTCCTCTTCATTGAAACCAATTCTCTGGTGTGATAATCTCAGTGTAGGTGTCCTTGGCAACAATCTTGTATTTTATGCTTGGATGAAACACATTGAAATTGATGTTCACTTCATTTGGGACCAA

Protein sequence

MCLICFTNLILMILNLLLYLALWKNTYLLLKEHHYLFIGALQYLIHTCSNIAYIVNHFSQFLKHFTDLHWQAVKCVLRYLSGTLTFSLLFQQSLYLSIFAYLDSDLASNIDDHNFNTKSEYPALAHAASEIIWLQQLLFKLHVSSSLKPILWCDNLSVGVLGNNLVFYAWMKHIEIDVHFIWDQ

Homology

[Close]

BLAST of Cucsa.244530 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.8e-12
Identity = 51/171 (29.82%), Postives = 87/171 (50.88%), Query Frame = 1


Query: 38   IGALQY-LIHTCSNIAYIVNHFSQFLKHFTDLHWQAVKCVLRYLSGTLTFSLLFQQSLYL 97
            +G+L Y ++ T  +IA+ V   S+FL++    HW+AVK +LRYL GT    L F  S  +
Sbjct: 1115 VGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPI 1174

Query: 98   SIFAYLDSDLASNIDDHNFN--------------------------TKSEYPALAHAASE 157
             +  Y D+D+A +ID+   +                          T++EY A      E
Sbjct: 1175 -LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKE 1234

Query: 158  IIWLQQLLFKLHVSSSLKPILWCDNLSVGVLGNNLVFYAWMKHIEIDVHFI 182
            +IWL++ L +L +    + +++CD+ S   L  N +++A  KHI++  H+I
Sbjct: 1235 MIWLKRFLQELGLHQK-EYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWI 1283

[Close]

BLAST of Cucsa.244530 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 65.1 bits (157), Expect = 9.3e-10
Identity = 54/177 (30.51%), Postives = 81/177 (45.76%), Query Frame = 1


Query: 38   IGALQYL-IHTCSNIAYIVNHFSQFLKHFTDLHWQAVKCVLRYLSGTLTFSLLFQQSLYL 97
            IG L Y+ + T  ++   VN  S++        WQ +K VLRYL GT+   L+F+++L  
Sbjct: 1185 IGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAF 1244

Query: 98   --SIFAYLDSDLA-SNID------------DHNF--------------NTKSEYPALAHA 157
               I  Y+DSD A S ID            D N               +T++EY AL  A
Sbjct: 1245 ENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEA 1304

Query: 158  ASEIIWLQQLLFKLHVSSSLKPILWCDNLSVGVLGNNLVFYAWMKHIEIDVHFIWDQ 185
              E +WL+ LL  +++       ++ DN     + NN   +   KHI+I  HF  +Q
Sbjct: 1305 VREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQ 1361

[Close]

BLAST of Cucsa.244530 vs. TrEMBL
Match: A0A151QZC2_CAJCA (Copia protein OS=Cajanus cajan GN=KK1_043251 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.6e-27
Identity = 74/173 (42.77%), Postives = 96/173 (55.49%), Query Frame = 1


Query: 38  IGALQYLIHTCSNIAYIVNHFSQFLKHFTDLHWQAVKCVLRYLSGTLTFSLLFQQSLYLS 97
           IGALQYL +T  +IA+ VN  SQF+   T  HWQ +K +LRYL GT+ + L  + S YL 
Sbjct: 276 IGALQYLTNTRPDIAFSVNKLSQFMSSPTLDHWQGIKRILRYLQGTMHYCLHIKCSAYLD 335

Query: 98  IFAYLDSDLASNIDDHNFN--------------------------TKSEYPALAHAASEI 157
           I  + D+D A+++DD                              T+SEY ALA  A+EI
Sbjct: 336 IAGFSDADWATSVDDRKSMAGQCVFLGDTLVSWSSRKQQVVSRSSTESEYRALADLAAEI 395

Query: 158 IWLQQLLFKLHVSSSLKPILWCDNLSVGVLGNNLVFYAWMKHIEIDVHFIWDQ 185
            W + LL +L +    KPILWCDNLS   L +N V +A  KHIE DVH+I DQ
Sbjct: 396 TWTRSLLTELKLPQPRKPILWCDNLSAKALASNPVMHARTKHIETDVHYIRDQ 448

[Close]

BLAST of Cucsa.244530 vs. TrEMBL
Match: A0A151SA74_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_026523 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.6e-27
Identity = 74/173 (42.77%), Postives = 96/173 (55.49%), Query Frame = 1


Query: 38  IGALQYLIHTCSNIAYIVNHFSQFLKHFTDLHWQAVKCVLRYLSGTLTFSLLFQQSLYLS 97
           IGALQYL +T  +IA+ VN  SQF+   T  HWQ +K +LRYL GT+ + L  + S YL 
Sbjct: 191 IGALQYLTNTRPDIAFSVNKLSQFMSSPTLDHWQGIKRILRYLQGTMHYCLHIKCSAYLD 250

Query: 98  IFAYLDSDLASNIDDHNFN--------------------------TKSEYPALAHAASEI 157
           I  + D+D A+++DD                              T+SEY ALA  A+EI
Sbjct: 251 IAGFSDADWATSVDDRKSMAGQCVFLGDTLVSWSSRKQQVVSRSSTESEYRALADLAAEI 310

Query: 158 IWLQQLLFKLHVSSSLKPILWCDNLSVGVLGNNLVFYAWMKHIEIDVHFIWDQ 185
            W + LL +L +    KPILWCDNLS   L +N V +A  KHIE DVH+I DQ
Sbjct: 311 TWTRSLLTELKLPQPRKPILWCDNLSAKALASNPVMHARTKHIETDVHYIRDQ 363

[Close]

BLAST of Cucsa.244530 vs. TrEMBL
Match: A5B1N8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025614 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-26
Identity = 75/172 (43.60%), Postives = 96/172 (55.81%), Query Frame = 1


Query: 38   IGALQYLIHTCSNIAYIVNHFSQFLKHFTDLHWQAVKCVLRYLSGTLTFSLLFQQSLYLS 97
            +GALQYL  T  +I++ VN   QF+   T  HW AVK +LRYL GTL++ +  QQS  L 
Sbjct: 1004 VGALQYLTLTRPDISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGIQMQQSTSLD 1063

Query: 98   IFAYLDSDLASNIDDHNF--------------------------NTKSEYPALAHAASEI 157
            I  Y D+D AS  DD                             + +SEY ALA A SE+
Sbjct: 1064 IHGYTDADWASCPDDRRSTGGYGIFLGPNLVSWSSNKQKVVSRSSAESEYRALASATSEM 1123

Query: 158  IWLQQLLFKLHVSSSLKPILWCDNLSVGVLGNNLVFYAWMKHIEIDVHFIWD 184
            IW+Q +L +L +SSS  P+LWCDN S   L  N VF+A  KHIE+D+HFI D
Sbjct: 1124 IWIQYVLQELCLSSSSPPLLWCDNKSAAHLAANPVFHARTKHIEMDLHFIRD 1175

[Close]

BLAST of Cucsa.244530 vs. TrEMBL
Match: A5C001_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037543 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-26
Identity = 75/172 (43.60%), Postives = 96/172 (55.81%), Query Frame = 1


Query: 38   IGALQYLIHTCSNIAYIVNHFSQFLKHFTDLHWQAVKCVLRYLSGTLTFSLLFQQSLYLS 97
            +GALQYL  T  +I++ VN   QF+   T  HW AVK +LRYL GTL++ +  QQS  L 
Sbjct: 1146 VGALQYLTLTRPDISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGIQMQQSTSLD 1205

Query: 98   IFAYLDSDLASNIDDHNF--------------------------NTKSEYPALAHAASEI 157
            I  Y D+D AS  DD                             + +SEY ALA A SE+
Sbjct: 1206 IHGYTDADWASCPDDRRSTGGYGIFLGPNLVSWSSNKQKVVSRSSAESEYRALASATSEM 1265

Query: 158  IWLQQLLFKLHVSSSLKPILWCDNLSVGVLGNNLVFYAWMKHIEIDVHFIWD 184
            IW+Q +L +L +SSS  P+LWCDN S   L  N VF+A  KHIE+D+HFI D
Sbjct: 1266 IWIQYVLQELCLSSSSPPLLWCDNKSAAHLAANPVFHARTKHIEMDLHFIRD 1317

[Close]

BLAST of Cucsa.244530 vs. TrEMBL
Match: A0A0L9TFW9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan661s000900 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-25
Identity = 72/173 (41.62%), Postives = 95/173 (54.91%), Query Frame = 1


Query: 38  IGALQYLIHTCSNIAYIVNHFSQFLKHFTDLHWQAVKCVLRYLSGTLTFSLLFQQSLYLS 97
           IGALQYL +T  +IA+ VN  SQF+   T  HWQ +K +LRYL GT+   L  + S  L 
Sbjct: 51  IGALQYLTNTRPDIAFSVNKLSQFMSSPTIDHWQGIKRILRYLQGTIQHCLHIKPSTDLD 110

Query: 98  IFAYLDSDLASNIDDHNF--------------------------NTKSEYPALAHAASEI 157
           +  + D+D A+++DD                             +T+SEY ALA  A+EI
Sbjct: 111 LTGFSDADWATSVDDRKSMAGQCVFLGEKLVSWSSRKQKVVSRSSTESEYRALADLAAEI 170

Query: 158 IWLQQLLFKLHVSSSLKPILWCDNLSVGVLGNNLVFYAWMKHIEIDVHFIWDQ 185
            W + LL +L +    KP LWCDNLS   L +N V +A  KHIEIDVH+I DQ
Sbjct: 171 AWTRSLLDELRLPLPRKPTLWCDNLSAKALASNPVMHARSKHIEIDVHYIRDQ 223

[Close]

BLAST of Cucsa.244530 vs. NCBI nr
Match: gi|1009129580|ref|XP_015881842.1| (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Ziziphus jujuba])

HSP 1 Score: 141.4 bits (355), Expect = 1.6e-30
Identity = 77/173 (44.51%), Postives = 101/173 (58.38%), Query Frame = 1


Query: 38  IGALQYLIHTCSNIAYIVNHFSQFLKHFTDLHWQAVKCVLRYLSGTLTFSLLFQQSLYLS 97
           IG LQYL  T   I+YIVN  SQ++   TD HW A K +LRYL GT  F LL + S +L+
Sbjct: 35  IGMLQYLTITRPEISYIVNKLSQYMHKPTDAHWTACKKILRYLQGTKHFGLLLRPSNHLT 94

Query: 98  IFAYLDSDLASNIDDHN--------------------------FNTKSEYPALAHAASEI 157
           I  + D+D ASNI D                             +T+S+Y ALAH A+E+
Sbjct: 95  ISGFTDADWASNIYDKKSTGGYCIYLGDSLVYWSSKKQNVVARSSTESKYRALAHGAAEV 154

Query: 158 IWLQQLLFKLHVSSSLKPILWCDNLSVGVLGNNLVFYAWMKHIEIDVHFIWDQ 185
            WLQQLL +L++ SS  P++WCDN+S G L  N VF+   KH+EIDVHF+ D+
Sbjct: 155 SWLQQLLHELNMVSSTTPVIWCDNMSTGALAANPVFHQRTKHVEIDVHFVRDK 207

[Close]

BLAST of Cucsa.244530 vs. NCBI nr
Match: gi|1009128676|ref|XP_015881362.1| (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Ziziphus jujuba])

HSP 1 Score: 133.3 bits (334), Expect = 4.4e-28
Identity = 73/173 (42.20%), Postives = 99/173 (57.23%), Query Frame = 1


Query: 38  IGALQYLIHTCSNIAYIVNHFSQFLKHFTDLHWQAVKCVLRYLSGTLTFSLLFQQSLYLS 97
           IG LQYL+ T  ++A+I+N  SQF++  T++HW A KCVL YL GT+   L  + SL  S
Sbjct: 119 IGTLQYLLLTRPDLAFIINKLSQFMQAPTEVHWAACKCVLHYLKGTIQLGLHIRSSLRSS 178

Query: 98  IFAYLDSDLASNIDDH--------------------------NFNTKSEYPALAHAASEI 157
           ++ Y D++ ASN+DD                             + +SEY ALAH   E+
Sbjct: 179 LYGYTDANWASNVDDRRSTGGCCVYLNDNLVSWSSRKQHVVARSSMESEYRALAHGIDEL 238

Query: 158 IWLQQLLFKLHVSSSLKPILWCDNLSVGVLGNNLVFYAWMKHIEIDVHFIWDQ 185
            W+Q LL +L V  S  PIL CDN+S   L +N VF+A  KHIEIDVHF+ D+
Sbjct: 239 AWIQSLLNELCVPVSHPPILLCDNMSARSLASNPVFHARTKHIEIDVHFVRDK 291

[Close]

BLAST of Cucsa.244530 vs. NCBI nr
Match: gi|1012340422|gb|KYP51639.1| (hypothetical protein KK1_026523 [Cajanus cajan])

HSP 1 Score: 128.6 bits (322), Expect = 1.1e-26
Identity = 74/173 (42.77%), Postives = 96/173 (55.49%), Query Frame = 1


Query: 38  IGALQYLIHTCSNIAYIVNHFSQFLKHFTDLHWQAVKCVLRYLSGTLTFSLLFQQSLYLS 97
           IGALQYL +T  +IA+ VN  SQF+   T  HWQ +K +LRYL GT+ + L  + S YL 
Sbjct: 191 IGALQYLTNTRPDIAFSVNKLSQFMSSPTLDHWQGIKRILRYLQGTMHYCLHIKCSAYLD 250

Query: 98  IFAYLDSDLASNIDDHNFN--------------------------TKSEYPALAHAASEI 157
           I  + D+D A+++DD                              T+SEY ALA  A+EI
Sbjct: 251 IAGFSDADWATSVDDRKSMAGQCVFLGDTLVSWSSRKQQVVSRSSTESEYRALADLAAEI 310

Query: 158 IWLQQLLFKLHVSSSLKPILWCDNLSVGVLGNNLVFYAWMKHIEIDVHFIWDQ 185
            W + LL +L +    KPILWCDNLS   L +N V +A  KHIE DVH+I DQ
Sbjct: 311 TWTRSLLTELKLPQPRKPILWCDNLSAKALASNPVMHARTKHIETDVHYIRDQ 363

[Close]

BLAST of Cucsa.244530 vs. NCBI nr
Match: gi|1012323592|gb|KYP35708.1| (Copia protein [Cajanus cajan])

HSP 1 Score: 128.6 bits (322), Expect = 1.1e-26
Identity = 74/173 (42.77%), Postives = 96/173 (55.49%), Query Frame = 1


Query: 38  IGALQYLIHTCSNIAYIVNHFSQFLKHFTDLHWQAVKCVLRYLSGTLTFSLLFQQSLYLS 97
           IGALQYL +T  +IA+ VN  SQF+   T  HWQ +K +LRYL GT+ + L  + S YL 
Sbjct: 276 IGALQYLTNTRPDIAFSVNKLSQFMSSPTLDHWQGIKRILRYLQGTMHYCLHIKCSAYLD 335

Query: 98  IFAYLDSDLASNIDDHNFN--------------------------TKSEYPALAHAASEI 157
           I  + D+D A+++DD                              T+SEY ALA  A+EI
Sbjct: 336 IAGFSDADWATSVDDRKSMAGQCVFLGDTLVSWSSRKQQVVSRSSTESEYRALADLAAEI 395

Query: 158 IWLQQLLFKLHVSSSLKPILWCDNLSVGVLGNNLVFYAWMKHIEIDVHFIWDQ 185
            W + LL +L +    KPILWCDNLS   L +N V +A  KHIE DVH+I DQ
Sbjct: 396 TWTRSLLTELKLPQPRKPILWCDNLSAKALASNPVMHARTKHIETDVHYIRDQ 448

[Close]

BLAST of Cucsa.244530 vs. NCBI nr
Match: gi|147816383|emb|CAN68489.1| (hypothetical protein VITISV_037543 [Vitis vinifera])

HSP 1 Score: 127.9 bits (320), Expect = 1.9e-26
Identity = 75/172 (43.60%), Postives = 96/172 (55.81%), Query Frame = 1


Query: 38   IGALQYLIHTCSNIAYIVNHFSQFLKHFTDLHWQAVKCVLRYLSGTLTFSLLFQQSLYLS 97
            +GALQYL  T  +I++ VN   QF+   T  HW AVK +LRYL GTL++ +  QQS  L 
Sbjct: 1146 VGALQYLTLTRPDISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGIQMQQSTSLD 1205

Query: 98   IFAYLDSDLASNIDDHNF--------------------------NTKSEYPALAHAASEI 157
            I  Y D+D AS  DD                             + +SEY ALA A SE+
Sbjct: 1206 IHGYTDADWASCPDDRRSTGGYGIFLGPNLVSWSSNKQKVVSRSSAESEYRALASATSEM 1265

Query: 158  IWLQQLLFKLHVSSSLKPILWCDNLSVGVLGNNLVFYAWMKHIEIDVHFIWD 184
            IW+Q +L +L +SSS  P+LWCDN S   L  N VF+A  KHIE+D+HFI D
Sbjct: 1266 IWIQYVLQELCLSSSSPPLLWCDNKSAAHLAANPVFHARTKHIEMDLHFIRD 1317

The following BLAST results are available for this feature:

BLAST of Cucsa.244530 vs. Swiss-Prot


Match Name	E-value	Identity	Description
POLX_TOBAC	5.8e-12	29.82	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
COPIA_DROME	9.3e-10	30.51	Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3	[more]

BLAST of Cucsa.244530 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A151QZC2_CAJCA	7.6e-27	42.77	Copia protein OS=Cajanus cajan GN=KK1_043251 PE=4 SV=1	[more]
A0A151SA74_CAJCA	7.6e-27	42.77	Uncharacterized protein OS=Cajanus cajan GN=KK1_026523 PE=4 SV=1	[more]
A5B1N8_VITVI	1.3e-26	43.60	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025614 PE=4 SV=1	[more]
A5C001_VITVI	1.3e-26	43.60	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037543 PE=4 SV=1	[more]
A0A0L9TFW9_PHAAN	1.4e-25	41.62	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan661s000900 PE=4 SV=1	[more]

BLAST of Cucsa.244530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|1009129580\|ref\|XP_015881842.1\|	1.6e-30	44.51	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Ziziphus jujuba...	[more]
gi\|1009128676\|ref\|XP_015881362.1\|	4.4e-28	42.20	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Ziziphus jujuba...	[more]
gi\|1012340422\|gb\|KYP51639.1\|	1.1e-26	42.77	hypothetical protein KK1_026523 [Cajanus cajan]	[more]
gi\|1012323592\|gb\|KYP35708.1\|	1.1e-26	42.77	Copia protein [Cajanus cajan]	[more]
gi\|147816383\|emb\|CAN68489.1\|	1.9e-26	43.60	hypothetical protein VITISV_037543 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.244530.1	Cucsa.244530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 38..148 score: 3.3
None	No IPR available	PANTHER	PTHR11439:SF185	SUBFAMILY NOT NAMED	coord: 38..148 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.244530	Cucurbita pepo (Zucchini)	cgycpeB0652
Cucsa.244530	Cucurbita pepo (Zucchini)	cgycpeB0653
Cucsa.244530	Cucurbita pepo (Zucchini)	cgycpeB0654
Cucsa.244530	Bottle gourd (USVL1VR-Ls)	cgylsiB403
Cucsa.244530	Bottle gourd (USVL1VR-Ls)	cgylsiB404
Cucsa.244530	Melon (DHL92) v3.6.1	cgymedB411
Cucsa.244530	Melon (DHL92) v3.6.1	cgymedB412
Cucsa.244530	Silver-seed gourd	carcgyB0253
Cucsa.244530	Silver-seed gourd	carcgyB0345
Cucsa.244530	Silver-seed gourd	carcgyB0436
Cucsa.244530	Cucumber (Chinese Long) v3	cgycucB369
Cucsa.244530	Cucumber (Chinese Long) v3	cgycucB370
Cucsa.244530	Watermelon (97103) v2	cgywmbB434
Cucsa.244530	Watermelon (97103) v2	cgywmbB435
Cucsa.244530	Wax gourd	cgywgoB493
Cucsa.244530	Wax gourd	cgywgoB494
Cucsa.244530	Cucumber (Gy14) v1	cgycgyB117
Cucsa.244530	Cucurbita maxima (Rimu)	cgycmaB0684
Cucsa.244530	Cucurbita maxima (Rimu)	cgycmaB0685
Cucsa.244530	Cucurbita maxima (Rimu)	cgycmaB0686
Cucsa.244530	Cucurbita maxima (Rimu)	cgycmaB0687
Cucsa.244530	Cucurbita moschata (Rifu)	cgycmoB0684
Cucsa.244530	Cucurbita moschata (Rifu)	cgycmoB0685
Cucsa.244530	Cucurbita moschata (Rifu)	cgycmoB0686
Cucsa.244530	Cucurbita moschata (Rifu)	cgycmoB0687
Cucsa.244530	Wild cucumber (PI 183967)	cgycpiB366
Cucsa.244530	Wild cucumber (PI 183967)	cgycpiB367
Cucsa.244530	Cucumber (Chinese Long) v2	cgycuB350
Cucsa.244530	Cucumber (Chinese Long) v2	cgycuB351
Cucsa.244530	Melon (DHL92) v3.5.1	cgymeB416
Cucsa.244530	Melon (DHL92) v3.5.1	cgymeB417
Cucsa.244530	Watermelon (Charleston Gray)	cgywcgB432
Cucsa.244530	Watermelon (Charleston Gray)	cgywcgB433
Cucsa.244530	Watermelon (97103) v1	cgywmB462
Cucsa.244530	Watermelon (97103) v1	cgywmB463