Cucsa.244360 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.244360
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold02135 : 196065 .. 196451 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCGAAAGGGGTTAAAGGCACTTTCCAAAATCCTTGGAAGGATATTTCTTTCGAGCTCCCTACTTTCTCTCGCTTTACTCGCTGTTTAGCAGGAAATGGCAAGGATACTTACTTTTGGGAGGATCAGTGGGTGGGGAAGAATTCCCTTTGTTCTTTATTTCCGCATCTTTATCATTTATCCTCTTCCCAAAATTGTATGATTTCGGATTTTTTGGTTAGTTTTGAGATTTCTGTGTCTTTTTCTTTCGGGTTCCATCGTAATTTGATCAATAGGGAAACGACGGAGATGGCCTCCCTTCTTTTCTTGCTTGAGGGGTGCTGTTCTAGGGAGGGGAGAAGGGATGTTCGTGTTTGGAACCCTAATCCTAGTGGGGTCTTACTT

mRNA sequence

atggctccgaaaggggttaaaggcactttccaaaatccttggaaggatatttctttcgagctccctactttctctcgctttactcgctgtttagcaggaaatggcaaggatacttacttttgggaggatcagtgggtggggaagaattccctttgttctttatttccgcatctttatcatttatcctcttcccaaaattgtatgatttcggattttttggttagttttgagatttctgtgtctttttctttcgggttccatcgtaatttgatcaatagggaaacgacggagatggcctcccttcttttcttgcttgaggggtgctgttctagggaggggagaagggatgttcgtgtttggaaccctaatcctagtggggtcttactt

Coding sequence (CDS)

ATGGCTCCGAAAGGGGTTAAAGGCACTTTCCAAAATCCTTGGAAGGATATTTCTTTCGAGCTCCCTACTTTCTCTCGCTTTACTCGCTGTTTAGCAGGAAATGGCAAGGATACTTACTTTTGGGAGGATCAGTGGGTGGGGAAGAATTCCCTTTGTTCTTTATTTCCGCATCTTTATCATTTATCCTCTTCCCAAAATTGTATGATTTCGGATTTTTTGGTTAGTTTTGAGATTTCTGTGTCTTTTTCTTTCGGGTTCCATCGTAATTTGATCAATAGGGAAACGACGGAGATGGCCTCCCTTCTTTTCTTGCTTGAGGGGTGCTGTTCTAGGGAGGGGAGAAGGGATGTTCGTGTTTGGAACCCTAATCCTAGTGGGGTCTTACTT

Protein sequence

MAPKGVKGTFQNPWKDISFELPTFSRFTRCLAGNGKDTYFWEDQWVGKNSLCSLFPHLYHLSSSQNCMISDFLVSFEISVSFSFGFHRNLINRETTEMASLLFLLEGCCSREGRRDVRVWNPNPSGVLL
Homology
[Close]
BLAST of Cucsa.244360 vs. TrEMBL
Match: M5WDM3_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017805mg PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.7e-15
Identity = 53/126 (42.06%), Postives = 65/126 (51.59%), Query Frame = 1 

Query: 2   APKGVKGTFQNPWKDISFELPTFSRFTRCLAGNGKDTYFWEDQWVGKNSLCSLFPHLYHL 61
           A   ++GT +NPW+DIS     F +      G G    FWED W     L  +FP L++L
Sbjct: 162 AKPAIRGTCRNPWRDISSGYNLFLQGCVFEVGCGVRVRFWEDDWSQGGILKEVFPRLFNL 221

Query: 62  SSSQNCMISDFLVSFEISVSFSFGFHRNLINRETTEMASLLFLLEGCCSREGRRDVRVWN 121
           SS QN  IS F  S    +S+ FGF RNL   E  E A LL LLEG      R D R W 
Sbjct: 222 SSKQNHNISSFTDSDGFPISWEFGFRRNLNELEIEEAARLLDLLEGVRLITSRLDKRRWK 281

Query: 122 PNPSGV 128
            +PSG+
Sbjct: 282 LDPSGL 287

[Close]
BLAST of Cucsa.244360 vs. TrEMBL
Match: M5WJY9_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022276mg PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 5.2e-14
Identity = 45/122 (36.89%), Postives = 63/122 (51.64%), Query Frame = 1 

Query: 6   VKGTFQNPWKDISFELPTFSRFTRCLAGNGKDTYFWEDQWVGKNSLCSLFPHLYHLSSSQ 65
           V G+ +NPW+DIS    TF +  R   GNG    FWEDQW+ +  L  LFP L+ LS  +
Sbjct: 111 VTGSCRNPWRDISKGYNTFLQCCRFSVGNGVKVRFWEDQWLKEGLLRELFPRLFSLSRKK 170

Query: 66  NCMISDFLVSFEISVSFSFGFHRNLINRETTEMASLLFLLEGCCSREGRRDVRVWNPNPS 125
              I DF++      ++ FGF RNL   E TE+  L+ +L        + D R+W     
Sbjct: 171 EKCIVDFVIDAATPSNWDFGFRRNLTEAEITEVVLLMDVLRVIHLNYTKADKRIWELEDH 230

Query: 126 GV 128
           G+
Sbjct: 231 GL 232

[Close]
BLAST of Cucsa.244360 vs. TrEMBL
Match: M5XTH8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020284mg PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.4e-13
Identity = 50/126 (39.68%), Postives = 63/126 (50.00%), Query Frame = 1 

Query: 2   APKGVKGTFQNPWKDISFELPTFSRFTRCLAGNGKDTYFWEDQWVGKNSLCSLFPHLYHL 61
           A    +G+ ++PW+DIS     F +      G G    FWED W     L  +FP L++L
Sbjct: 162 AKPATRGSCRSPWRDISSGYNLFLQGCVFKVGCGVRVRFWEDDWSRGGVLKEVFPRLFNL 221

Query: 62  SSSQNCMISDFLVSFEISVSFSFGFHRNLINRETTEMASLLFLLEGCCSREGRRDVRVWN 121
           S  QN  IS F       +S+ FGF RNL   E TE A LL LLEG      R D R W 
Sbjct: 222 SRKQNHNISSFTGLDGFPLSWDFGFRRNLNELEITEAARLLDLLEGVRVITSRLDKRRWK 281

Query: 122 PNPSGV 128
            +PSG+
Sbjct: 282 LDPSGL 287

[Close]
BLAST of Cucsa.244360 vs. TrEMBL
Match: M5XUF8_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015473mg PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 9.8e-13
Identity = 49/115 (42.61%), Postives = 60/115 (52.17%), Query Frame = 1 

Query: 13   PWKDISFELPTFSRFTRCLAGNGKDTYFWEDQWVGKNSLCSLFPHLYHLSSSQNCMISDF 72
            PW+DIS     F +    + G G    FWED W     L  +FP L++LS  QN  IS F
Sbjct: 1152 PWRDISSGYNLFLQGCVFVVGCGVRVRFWEDDWNRGGVLKEVFPRLFNLSRKQNHNISSF 1211

Query: 73   LVSFEISVSFSFGFHRNLINRETTEMASLLFLLEGCCSREGRRDVRVWNPNPSGV 128
              S   S+S+ FGF R+L   E TE A LL LLEG      R D R W  +PSG+
Sbjct: 1212 TGSDGFSLSWDFGFRRDLNELEITEAARLLDLLEGVRLITSRLDRRRWKLDPSGL 1266

[Close]
BLAST of Cucsa.244360 vs. TrEMBL
Match: M5WJI4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020784mg PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.7e-12
Identity = 49/126 (38.89%), Postives = 62/126 (49.21%), Query Frame = 1 

Query: 2   APKGVKGTFQNPWKDISFELPTFSRFTRCLAGNGKDTYFWEDQWVGKNSLCSLFPHLYHL 61
           A    +G+ ++PW+DIS     F +      G G    FWED W     L  +FP L++L
Sbjct: 185 AKPATRGSCRSPWRDISSGYNLFLQGCVFEVGCGVRVRFWEDDWSRGGVLKEVFPRLFNL 244

Query: 62  SSSQNCMISDFLVSFEISVSFSFGFHRNLINRETTEMASLLFLLEGCCSREGRRDVRVWN 121
           S  QN  IS F       +S+ FGF RNL   E TE A LL LLEG      R D R W 
Sbjct: 245 SRKQNHNISSFTGLDGFPLSWDFGFRRNLNELEITEAARLLDLLEGVRVFSSRLDKRRWK 304

Query: 122 PNPSGV 128
            +P G+
Sbjct: 305 LDPFGL 310

[Close]
BLAST of Cucsa.244360 vs. NCBI nr
Match: gi|595851823|ref|XP_007210192.1| (hypothetical protein PRUPE_ppa017805mg, partial [Prunus persica])

HSP 1 Score: 89.7 bits (221), Expect = 3.9e-15
Identity = 53/126 (42.06%), Postives = 65/126 (51.59%), Query Frame = 1 

Query: 2   APKGVKGTFQNPWKDISFELPTFSRFTRCLAGNGKDTYFWEDQWVGKNSLCSLFPHLYHL 61
           A   ++GT +NPW+DIS     F +      G G    FWED W     L  +FP L++L
Sbjct: 162 AKPAIRGTCRNPWRDISSGYNLFLQGCVFEVGCGVRVRFWEDDWSQGGILKEVFPRLFNL 221

Query: 62  SSSQNCMISDFLVSFEISVSFSFGFHRNLINRETTEMASLLFLLEGCCSREGRRDVRVWN 121
           SS QN  IS F  S    +S+ FGF RNL   E  E A LL LLEG      R D R W 
Sbjct: 222 SSKQNHNISSFTDSDGFPISWEFGFRRNLNELEIEEAARLLDLLEGVRLITSRLDKRRWK 281

Query: 122 PNPSGV 128
            +PSG+
Sbjct: 282 LDPSGL 287

[Close]
BLAST of Cucsa.244360 vs. NCBI nr
Match: gi|595884130|ref|XP_007212918.1| (hypothetical protein PRUPE_ppa022276mg, partial [Prunus persica])

HSP 1 Score: 85.5 bits (210), Expect = 7.4e-14
Identity = 45/122 (36.89%), Postives = 63/122 (51.64%), Query Frame = 1 

Query: 6   VKGTFQNPWKDISFELPTFSRFTRCLAGNGKDTYFWEDQWVGKNSLCSLFPHLYHLSSSQ 65
           V G+ +NPW+DIS    TF +  R   GNG    FWEDQW+ +  L  LFP L+ LS  +
Sbjct: 111 VTGSCRNPWRDISKGYNTFLQCCRFSVGNGVKVRFWEDQWLKEGLLRELFPRLFSLSRKK 170

Query: 66  NCMISDFLVSFEISVSFSFGFHRNLINRETTEMASLLFLLEGCCSREGRRDVRVWNPNPS 125
              I DF++      ++ FGF RNL   E TE+  L+ +L        + D R+W     
Sbjct: 171 EKCIVDFVIDAATPSNWDFGFRRNLTEAEITEVVLLMDVLRVIHLNYTKADKRIWELEDH 230

Query: 126 GV 128
           G+
Sbjct: 231 GL 232

[Close]
BLAST of Cucsa.244360 vs. NCBI nr
Match: gi|596062294|ref|XP_007221156.1| (hypothetical protein PRUPE_ppa020284mg [Prunus persica])

HSP 1 Score: 82.8 bits (203), Expect = 4.8e-13
Identity = 50/126 (39.68%), Postives = 63/126 (50.00%), Query Frame = 1 

Query: 2   APKGVKGTFQNPWKDISFELPTFSRFTRCLAGNGKDTYFWEDQWVGKNSLCSLFPHLYHL 61
           A    +G+ ++PW+DIS     F +      G G    FWED W     L  +FP L++L
Sbjct: 162 AKPATRGSCRSPWRDISSGYNLFLQGCVFKVGCGVRVRFWEDDWSRGGVLKEVFPRLFNL 221

Query: 62  SSSQNCMISDFLVSFEISVSFSFGFHRNLINRETTEMASLLFLLEGCCSREGRRDVRVWN 121
           S  QN  IS F       +S+ FGF RNL   E TE A LL LLEG      R D R W 
Sbjct: 222 SRKQNHNISSFTGLDGFPLSWDFGFRRNLNELEITEAARLLDLLEGVRVITSRLDKRRWK 281

Query: 122 PNPSGV 128
            +PSG+
Sbjct: 282 LDPSGL 287

[Close]
BLAST of Cucsa.244360 vs. NCBI nr
Match: gi|596221970|ref|XP_007224079.1| (hypothetical protein PRUPE_ppa015473mg, partial [Prunus persica])

HSP 1 Score: 81.3 bits (199), Expect = 1.4e-12
Identity = 49/115 (42.61%), Postives = 60/115 (52.17%), Query Frame = 1 

Query: 13   PWKDISFELPTFSRFTRCLAGNGKDTYFWEDQWVGKNSLCSLFPHLYHLSSSQNCMISDF 72
            PW+DIS     F +    + G G    FWED W     L  +FP L++LS  QN  IS F
Sbjct: 1152 PWRDISSGYNLFLQGCVFVVGCGVRVRFWEDDWNRGGVLKEVFPRLFNLSRKQNHNISSF 1211

Query: 73   LVSFEISVSFSFGFHRNLINRETTEMASLLFLLEGCCSREGRRDVRVWNPNPSGV 128
              S   S+S+ FGF R+L   E TE A LL LLEG      R D R W  +PSG+
Sbjct: 1212 TGSDGFSLSWDFGFRRDLNELEITEAARLLDLLEGVRLITSRLDRRRWKLDPSGL 1266

[Close]
BLAST of Cucsa.244360 vs. NCBI nr
Match: gi|595841355|ref|XP_007208194.1| (hypothetical protein PRUPE_ppa020784mg [Prunus persica])

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-12
Identity = 49/126 (38.89%), Postives = 62/126 (49.21%), Query Frame = 1 

Query: 2   APKGVKGTFQNPWKDISFELPTFSRFTRCLAGNGKDTYFWEDQWVGKNSLCSLFPHLYHL 61
           A    +G+ ++PW+DIS     F +      G G    FWED W     L  +FP L++L
Sbjct: 185 AKPATRGSCRSPWRDISSGYNLFLQGCVFEVGCGVRVRFWEDDWSRGGVLKEVFPRLFNL 244

Query: 62  SSSQNCMISDFLVSFEISVSFSFGFHRNLINRETTEMASLLFLLEGCCSREGRRDVRVWN 121
           S  QN  IS F       +S+ FGF RNL   E TE A LL LLEG      R D R W 
Sbjct: 245 SRKQNHNISSFTGLDGFPLSWDFGFRRNLNELEITEAARLLDLLEGVRVFSSRLDKRRWK 304

Query: 122 PNPSGV 128
            +P G+
Sbjct: 305 LDPFGL 310

The following BLAST results are available for this feature:
BLAST of Cucsa.244360 vs. TrEMBL
Match NameE-valueIdentityDescription
M5WDM3_PRUPE2.7e-1542.06Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017805mg PE=4 S... [more]
M5WJY9_PRUPE5.2e-1436.89Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022276mg PE=4 S... [more]
M5XTH8_PRUPE3.4e-1339.68Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020284mg PE=4 SV=1[more]
M5XUF8_PRUPE9.8e-1342.61Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015473mg PE=4 S... [more]
M5WJI4_PRUPE1.7e-1238.89Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020784mg PE=4 SV=1[more]
BLAST of Cucsa.244360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|595851823|ref|XP_007210192.1|3.9e-1542.06hypothetical protein PRUPE_ppa017805mg, partial [Prunus persica][more]
gi|595884130|ref|XP_007212918.1|7.4e-1436.89hypothetical protein PRUPE_ppa022276mg, partial [Prunus persica][more]
gi|596062294|ref|XP_007221156.1|4.8e-1339.68hypothetical protein PRUPE_ppa020284mg [Prunus persica][more]
gi|596221970|ref|XP_007224079.1|1.4e-1242.61hypothetical protein PRUPE_ppa015473mg, partial [Prunus persica][more]
gi|595841355|ref|XP_007208194.1|2.4e-1238.89hypothetical protein PRUPE_ppa020784mg [Prunus persica][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.244360.1Cucsa.244360.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.244360Cucumber (Chinese Long) v3cgycucB369
Cucsa.244360Cucumber (Chinese Long) v3cgycucB370
Cucsa.244360Watermelon (97103) v2cgywmbB434
Cucsa.244360Watermelon (97103) v2cgywmbB435
Cucsa.244360Wax gourdcgywgoB493
Cucsa.244360Cucumber (Gy14) v1cgycgyB117
Cucsa.244360Cucurbita maxima (Rimu)cgycmaB0684
Cucsa.244360Cucurbita maxima (Rimu)cgycmaB0685
Cucsa.244360Cucurbita maxima (Rimu)cgycmaB0686
Cucsa.244360Cucurbita maxima (Rimu)cgycmaB0687
Cucsa.244360Cucurbita moschata (Rifu)cgycmoB0684
Cucsa.244360Cucurbita moschata (Rifu)cgycmoB0685
Cucsa.244360Cucurbita moschata (Rifu)cgycmoB0686
Cucsa.244360Cucurbita moschata (Rifu)cgycmoB0687
Cucsa.244360Wild cucumber (PI 183967)cgycpiB366
Cucsa.244360Wild cucumber (PI 183967)cgycpiB367
Cucsa.244360Cucumber (Chinese Long) v2cgycuB350
Cucsa.244360Cucumber (Chinese Long) v2cgycuB351
Cucsa.244360Melon (DHL92) v3.5.1cgymeB416
Cucsa.244360Melon (DHL92) v3.5.1cgymeB417
Cucsa.244360Watermelon (Charleston Gray)cgywcgB432
Cucsa.244360Watermelon (Charleston Gray)cgywcgB433
Cucsa.244360Watermelon (97103) v1cgywmB462
Cucsa.244360Watermelon (97103) v1cgywmB463
Cucsa.244360Cucurbita pepo (Zucchini)cgycpeB0652
Cucsa.244360Cucurbita pepo (Zucchini)cgycpeB0653
Cucsa.244360Cucurbita pepo (Zucchini)cgycpeB0654
Cucsa.244360Bottle gourd (USVL1VR-Ls)cgylsiB403
Cucsa.244360Bottle gourd (USVL1VR-Ls)cgylsiB404
Cucsa.244360Melon (DHL92) v3.6.1cgymedB411
Cucsa.244360Melon (DHL92) v3.6.1cgymedB412
Cucsa.244360Silver-seed gourdcarcgyB0253
Cucsa.244360Silver-seed gourdcarcgyB0436
Cucsa.244360Silver-seed gourdcarcgyB0734