Cucsa.244330 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.244330
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionDNA repair and recombination protein RAD54-like
Locationscaffold02135 : 164110 .. 173721 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGACGAAGATGAGATTGTCCCAGCCTCTGATTCTAGCGATTCAAGCGACGACTACATCGACATTAATGGTGAAGCCTTTCAGGATGAGGACGACGAAGAAGAACAATCCTCCAGTCTTTCCCCTTCATCTGACGAGGATCTAAAATCGAAGAACGTTGATGCCCTTTTGAGGTATGTATTTATGTTTAGCAACGCAATTCACGACTGAAGTAAAATAGTTTCCAACCGCAGCTTGTTAGTAGTCTAGGCCGCTTTTTtCCTTCTTCTCTTCCTTTCAACTGAAGATTGTTAGTTACTGCAAATGCTGACGATTCCTTAGAATTTTAAGTAAACTAAAGAATTGGACCTCGGATTAGGGAGGTGGAAATTTTCTTTACAGGGAGACTCTAATTGTACTAGATTGATTGTTTTGAAAAGAAGAGGAAGAGAAAAGAGCTTTGGAAACTGTCTGATTTTGCTTCTACGTGCTCATGGTGGTCGATCATGATATACCTAATGCTTATTTtCTTTGGATGCCGAAATACTGTCTTCTGAATTCTGAAATTTGGATAATTTTGAAATCGATAACTTGTTATTGCTATCTAGAATTTTCTTTCACTTGGATAGAGCAAGGTCCTTTTAGATCTGGCAGTGCTGCTCCTCTAATAATACTCGATATTTTTGGAAGTAGATGCAAATTTAAACTTCTTGGAAGTAGAGGAGCTTAAACATTTAAACATTCGAGGAGCTGCCACCACCATCACCATTTTGTACTTCTATTGACATGAAAATAACTAATTTAGTCTTGTGATCATATTCTAAATTTCTACCAGAGGTAACCTGGTTGTGAGAAGACAATCGTTGCTCCCAAGAGTTCTCTCAGTTGCAGAAGGTGCAGCAGTTTGTAGAAAACCTTTTAAACCTCCCTGCTCAAGTGGCTACGATGAAAGAAACAATCAGCTTGCACGTCGGCTGTGGGCACGGAAACGATTTGTTCCTTGGGGCTCTTTAAAACCAGCGTCATCTGTTATTGCCACTAATTTATTTCTCCCAAAAGCTGCTGAGAATGATGCAGTGGAGGAAAGTGTAACTCTACCACCTGGGATTGATCCTTTGGTGTTGTGGCAACCCGAAGACTCTGAGCTTAATGTCACGAATTTAGCATCAATAACAGTTGATCCATTGCTAGTTCGTTTCCTTCGCCCTCATCAGAGGTATCATTTCTGTTTTATTTTATGGCATATTTCAGCATTTTGTCCTAATAAATGCTGTAATAAATCAGTCTTACAACCAGAGCACACATGCAGGACAACAAGGTCCTTGAGTCCGTTTCATATTTAAAAAAAaTGTTTTAGCAGTTTTATTGTAGAACTTAGATGTTGTCCTTTCTCATTTTAGTTTGATTTTTAATTAAGAAAGACAACCATAGCAGGAAAATATCACAAAAAGAAGTTGAATCTAAAAAAATTTGTTGGAAAAAGTATTGTGCAATTCGACTGGCAGTATTTGACGAGATGGACATATTTAATTTTTTTtGCAGAGAAGGTGTACAGTTCATGTTTGAATGTGTTTCCGGACTACATAAGGGGACAGACATATTTGGGTGCATTCTGGCGGATGATATGGGGTTAGTATTCCTCTCTCAAACATTTAAATGATCGAAACACCAATACACAAGGACTGTACTTATCTTTCAGTTTATTTCACTCATATCCTTAAAGTTGTTTTGGTGATTATCCTGCAGTTTAGGAAAAACATTGCAGTCGATCAGTTTGCTGTATACCCTTCTATGTCAAGGTTTTGATGGAAAGCCAATGGTTAAAAAGGCTATCATTGTTACACCTACTAGTCTCGTGAGTAATTGGGAGGCTGAAATTAAGAAGTGGGTTGGTGAAAGGGTTCACCTTATTGCTCTCTGTGAAAGTTCTAGAGAGGACGTTGTCTCTAGCATTGACAGCTTTGTACATCCCAAGAGTTCTTTACAGGTATATTTGTGTGCTTATTCTGGTAATATCTACAAACAACTGTTTCAGTTGGACACATTAAAGTGAATTACAATTCATACATTCATAGGTGCTGATTATTTCATATGAGACATTCCGTATGCATTCATCAAAGTTCAGCCAAAGTGAATCATGTGATTTACTCATATGCGATGAGGCTCACCGACTGAAGAATGATCAGACATTGACAAATCGGGTATAACGTGTGGGCTTTAATTTTCCATTTCAATTCTTTTTCATATGGAATTATTTCTATATCTCCTCTTCAGGCACTGGCTGCCCTGTCTTGCAGGCGTAGGGTTTTGTTATCAGGAACTCCAATGCAGGTATTTTTATTTtCCTTTTCATAAGAATTAAAAACCAACTTCCTAACGTGGAAAATACTCACGTGCCTCCAATTTTTtAAAATTCTCAACTTCATGCACTGTTCTACCTTTAAGGTTTCAAGCTTCTATATCATTTTTGTAATACGGCCCTTCACTCATACTCCTACAGAATGACCTAGAAGAGTTCTTTGCCATGGTTAACTTTACCAATCCAGGAATTTTGGGTGATGTTTCACATTTCCGTCGATATTATGAGGTGAGCTCTTCTTATTTTTATCTATTAATTTTCTTGTTTTAGTGGGGTGGAATTTGAGGGTCAAGCAATGTGATAAGTGGATGCAGACTCTGTGGCTTTTCAATTTTTGTGAGTTTGTACTTGCATGCGAGTGTGAAAAGAAGCATAAACCAGCCAATCAAGTGCATGCACTTGTTTCAACAGGACATTTGTGAACTTTAAGGATGACAAATGTGAAAAATTCCTTCAAGGAGAAAAGCCAAGGTTTTCTAGGCCATATATGAGCCCAATGTTGGAATATTGTCTTGTAATGAAGGCGTTCTGTTAGGTACTTAAGTAACTTGGAGAACCATACCCCAAAAGCCAACTATTGGAGTGGGAGAGAGCTAAGCACCTTGGAGAACCATACCCCAAAATTCAACTATTGGAGTGGGAGAGAGCCAAGCCAGTTAAGTACCACATTGGTCATCCCATTCAATGTGGGACAAAAGCATTCCATACCTACCTTGGTTCCTAACAATACCCCATATTCTTGGAAAGCCGCAAGATTTCACTCAACTACACTCGGTTAGAACCCTCTGTCTGTTCCACTCTGAAACGTCGACAACGGACTCTAATACCTTTGTTAGGTACTTAAGTACCTTGGAGAACCACACCCCAAAAGCCAGCTATTGGAGTGGGAAAGCCAAGCCACTTAAGTACCACATTGGCCATCCCATTCTTACCAATGTGGGGAAAAACCATCTCATAACAACCTTGGTTCCTACCATGTTCTTGATGTTTACCCTATTTCAGAAGTTGATAATTTTCTGTGGTAAGACTAAAGACTTAACACCATCTTTGTGAAGGCACCAATTATTTGTGGGAGGGAACCTATTGCTACCGAGGAAGAGAAAAAGCTAGGTGCTCAACGCTCGACTGAACTAAGTGAAAAGGTTAATCAGGTAATCTCCTTTGTTAGATGAGCCATCCAATAATATAACATTTAGATATAAACATACTTTTTtCTCTTAACTTTTTGGACATTATTTGTGGACTTGATCACATCCCAAAATATGCTTGGCAGTTTATCCTACGGAGGACTAATGCACTCTTATCAAATCACTTGCCACCAAAGGTATGGTATAATGTGTTCCATAACCAAGGTGAATCTTGGTATTGCTTATTTATATTTTATTTTTAATTTAACAACTTTGATTCATCTGAACAATTTTTATACAGCTGATTGGCCTAAAGTTTATTGTGTTTCACAAAAAATATGAAACACTCACTACACAAGCTTGTTTTTGATTTTTTTTTttCTTTTACCTTTTAGAGAGATCCTGTGTATTAACCGTTCACTAGTTAAAATGAACATGTTTATGAAAGTTTAACTACTTATCAGGTGTTTGTGAAGTTAAGCAACCAATTAGACACAAAATTGAAAGTCTAGGAACCTTTTTGATACATACTTAAAAAACCATGGACTAAGACTTGTAACATTTTCTAATCCTTTTTGTTTTGATTTTCTTGTCACCCTTATTTGTATCTCCTTCTTTCATTGATGAAAGTATCGGTTTCTTTTTCGAAAACAAGGGATGCTATGGTTCCACGATTTGATGATATAAAAGCTGTTTTAGTTTGTTTGGAAAGGAGAAAAGATTTCTCGATGAAACTAGAGATTAGGGAAAAGTTCAGGGCAATATTAATTTTGGTGTCTCCTTTGTTTGAAAATTTTTGTGACCATTCTTCCTTTTGATTACTTCGAAATGCCAATTGAATTTTTGTTTCTTACTAGATAAATTTACTTTCATTAGATAAACCAAAAGTTCTGTATTATGTAAGCTTCTACTTTTTTCTGCAGATAGTTGAAGTCATTTGCTGCAAGTTGAGTCCTCTTCAAGCAGACCTATATAATCATTTTGTACAGTCAAAAAATGTTAGCTCGCTGCCTGTGTAGTTTATTCCTATATCGATGTAATTATTCATTCCAGTTGTCTAACCAAACCAGGCTTATATCTTGTGGCCTCAATATAGGTTAAGCGGGCAATTACTGAAGAGCTAAAGCAAGCTAAGATTTTGGCCTACATAACTGCACTTAAGAAGCTTTGCAATCATCCAAAGGTATGGTTTACTCGAGTTTCTAAGAGAGATCTATTTTATCTAAATCTTGTACACGGTAGATCTTCTTTGTTATTGGTTAATTAGATGATAATCCAGATCATTTCTCTTAGACTTTCAACTTTTtCACCCTAAAAaTTTAAACATACAGACTGTCTTTGGTTTCTTTTCATACTATACGTTATTTACATAGATATGTTTTGGAATGAGAGTATCCTATACAATCTCCTCTCTTCAGCTTCTTTTTTATGTCGTTATAAATGAAAAATAACTATCAACCTAAGTGGAAGATCTCTTCTTGTAGCTTATATACGATACTATAAAAAGTGGGAGTCCAGGAACTTCAGGATTAGAGAGCTGTATTCGGTTTTTCCCTCCAGAGATGTTCTCTGGAAGGTAAGCTATGTTTCATTATCTCTCTGTCTGTCTCTCTCCTATGCATACAAACATCTGCAACTGGTGACTTAGGTTTGGAATTGTTATCACTGTCTGAGTAGTTTCTAATTTTGTTAGGTCTGGTGCATGGACTGGTGGAGATGGGGCTTGGGTTGAATTATCAGGGAAAATGCATGTCCTAGCTAGGTTACTAGCCCACTTACGCCAGAGAACTGATGACCGTATCGTTCTTGTCTCAAACTACACTCAAGTAATTTTCAGTTCCTTTGCTGACCTATTGAGGATAATAACAATTCCACCCTCCCTTCCCTGTCTCTGCTAAAGTACTCCTCTCACAGAACATTGTTTAATTGTATATGGTATTCACAAAaCCAGTTTAATTAATCTTTTAATTGCTCAACGTGTCATATATTCACTTTGGTTTGCAACTGAACCAGATTAAGTTTCTGCCTTGATGAAGTATAGCTATTTTCTGCTCTATACCCAAGATGAAACTTTTTGGTGTTTTGTAGTCTTTAATGTGTTATTTTGCGGTAATTAAATTATCTTCCCATCAATAAAACTAAACTCCTTTAATTAAATTATCTTCCCATCAATAAAACTAAATTCCTTTCTTAGGGGACTAATGTAACTTTCATGTATTAGACGCTAGATTTGTTTGCTCAACTGTGTCGTGAAAGGAGGTACCCGTATTTAAGGCTTGATGGAACCACATCAATAAGTAAAAGACAAAAGTTAGTCAACCGTTTTAATGATCTGTCAAAGGTATGCAGCCTTTATAAGATTCGATTTGGTTTtATTTTTCTATTCCTTTAGTGCAATCTGGACGTATAAATTGCTTCCTGCTTATTAGACTTTCAAGGAAGTCTATGTGGGGATAATATAGTGCTAAAGCACCGTTTTATCAATACTTCGCAGGATGAGTTTGTTTTTCTATTGAGCAGCAAGGCTGGTGGATGTGGTCTGAATTTGATTGGTGGAAATCGTTTAGTTCTGTTTGATCCTGACTGGAACCCTGCGAATGATAAGCAAGTAAACCTACCGCTGTGTGGAACCCCTGGTTTGGACTCATTGAATTCTAGAATATGAATATGCAGTCTGCCTTCTGATGTTTTCCTTGTTTTCATCTGTCTTACCATACGTGAATAGGCTGCTGCAAGAGTGTGGAGGGACGGACAAAAGAAGAGAGTATTCATCTACAGATTTTTAAGTACCGGAACGATTGAAGAAAAGGTTTGAACTCATTGTAAATAAGGCTAAAATAATCACCCTCTTCACGTTCATGTTTTTATGATATATATATATGTTGTCAATATAGTTAGAATTCTTTTCTCATATATCCTAGTGTTATATAGGTGTACCAGCGACAAATGTCAAAAGAAGGGTTACAAAAAGTTATTCAGCAGGAGTCAACAAATAACCTTACGACCCAGGTTTAAAATTGCTTACTTTTCGATATTGATTTGGAAATACTTAGCAACATTAAATCAAACTTGGAATCTAGAAAGGTTATTTGAAGGTCCCTTTTCTCCCTTCATTTTTCAGGTGAACTTCCTTTCATCTGAGGATTTACGCGATTTATTCTCATTTCATGATAACGTCAGGTAAAaCACTTGCTATGATTTATTTGCTCAAGATGTGTGACATTATCTTACAATTTTTTTAATAAAAGTCAGAAATAGTATATTATGCATTTTACATAGGAAGCCTGTATTTCATGGCGAATCGTGCAACCTATTTCACTAGGATAGAGTGGAGGAAGTTAATTCATATAAATACTGTGTACAAGAAATAAAAaTTTTAGGCCATTTGATAATAATGTCCTTTTTAGTTATGTTCTTGAAAATTAGGTGGTCTTCTTCTCAACTTTTTTtCAATAGTTTTTCATCTCTAGAAAGAAACATTTGGATTATTAGCCACACTTAAAAAATAAGAACAAAAATTTAAAAGTTAAAGCTTATAATCACTCTCACATATATAATTGGTTTTCATAACCATCCTGGCTTGGCGTAGTGCTAAATAAAGAAGACATAGTCTCAATAACTAAGAGGTCGTGGATTTAATTTATACTTGCCACCTACATAGGAATTAATTTCTTTCGAGTTATGTTGACACCCAAATGCTATAGGGTCAGATGGGTGGCCGTAATACTCACGATATAGTATATATATATAATTGTTTGTCTTTTGTCTTTTGTTTTTTAAAATTAAGCCTACAAACTTTTATCTATAACTTTCTTGCCTTGTTACCTACTTTTAAAAATTGTTTTAGAAAACCAAATTAAATTTTAGAAACTAAAAAACAGTAGTTTAAACTTGACTTTGTTCTTGAAGTCTTAGAATTTAAATGTGTTTTTAAGGAGTGTGAAAAACTTAACTAACAAATGATGAGGACACAATCGTACATTTCAAAAATACAAACTAAAAACAACAATAGTTATCAATGGGAGCTTTGTTTTTCAAAAACTTAATTTTGTTTTTAGAATTTTACTAAGAACTCAAACCTTTAAAAAGGAGAAAAATCATAATAACAGAATTGGAAAAACAAATTCAAAAATAGAAAACTAAAAGCAAAATAGCTATTGAAGTCTACCTTTTAAGTTTTTACTTGACTTGGATTTTGAAAGAACTATTATAAAGTTGGAAAAGAAATCATCTATCGTAGGTTGATTTTGAAAAACCAAATACTTAGACCTAATTAATGAGGTGCAAGCAtACTTTTTTTTTtCTAGGGTTAAGTAGCCACCAGTCTCTGACCGTTGATCAAACAGCTTGTCCTGTGATCTAAAAAaGGATTGTTTTGGTTTCCTATGCCTGACTTTTTTTTtCTTTCGCTACTTATTTATTTATATATATATATAttTTTTTTtAAGTGTTGGGTATATTTTCTCAATTTAACTGTAAGTTAACAAATCCAATGTTGTTTTCCTTTACCTGAGACATCAACAAACTAAGATCTTTATATAACAAACCCCATAAAAGTTCCTTTCTTCCCCTAATACACGAATTAGAAATTTATCACCCACAAAAACAAACAAATCAAAGGACATAAATTTTTGCAAACATAACCGGGATTTACAAATATAACAGCATGAAGAAGTTTGTCATTTTGAATACACAGGTCTGAAATCCATGAAAAGATGAATTGCAGTCGGTGCCAAAATTGTTATGGTAGGCCCGAGGACATGGACGAAAACCTGTCTACAAACGGACCTTGTCAGTCTGACCAAGTAACTTCTGACATTGGCGGATTTGCACAACTTGCTGGATGCTTAGACAAGTTAAAGAAATCAGAGCAACAGGTTGGTCACTTCTACAATTAACGGGAGGATAGAATTTCTTCTAGTTGCCTTATTTATCCACATATGCTCTTCAAAATTTTCAGGTGGGGTCTCCGCTAGAAGAAGATTTAGGCAACTGGGGGCATCATTTTGACTCTACTACCGTACCTGATACCATTTTACAAGCTTCTGCTGGTGATGAGGTTTGATCTTTAATTCTTTCATATATTGTTAAATGGCTAAATTATAGAAAATGCCTTTGAACTTTGTATTTTGGGTAATACCCCTAAATTTTCAAAGTCTCGACAGCACCCTTCGATTTTAAAAAACAATTAATCTTGTATTTTGTTTCAAAAATACCGTCGGTATTTAAACGACAATCTTTTTGACACAATACAAAATTTTAATTTTTtGTTTTGCTTTAAAAAAAATCCTTACACTTTCAAAAATTGGATAAAAACTTATAAATTTTtCGTTTAAAAAATGTCCTTTCAACTTTCACAAGTTGCATTAATAACAATTTATTTGAAGCTAACATGAGTTTGAAAACGATCCATTGTAAAACAATTTTCTTTCCACATAGATACTCGTATCTTTTTTCCATTTGTCCAATTTGTTCAGCAAAAATGTATAAACCAAAATTTTAAGCAGCATAAATTTCTATAAAATCTCACAAATTCTCAAAATTAAAATTCTCCTTAAAAACTCATCAAAACTATAAATACACAAATACAAAAAGGATAGTATTTGGTTATTAAAACcCTCAACTAATAACGTACAACCAATCTACTGTTCCTGAGTGGTTTCATATCTTTCTTCTAGTTATAATCTATATGCTTTAATCAAATGGTTTATTTATTTATATTTATTTTAAAAaTAAAGAATCACTTTCTGTTATCTCATGATTTACTTGTGTTTGTTTCAGGTTACCTTTGTTTTCTCAAATCAAGTTGATGGAAAGCTTGTACCCGTCGAATCGATGAGTAGTCCGAGGATGAAAGATGCAGAGGGAAATGGGAACAACTCCAGATTGAACCAAAACTCAAGACAGAAACCATTTTTACTATCTCAACATAGAAAACCTTTACAATCCATTACTTCTAATGAAGATCCCAACAAAGGTACATTAAAATTTACATCCACTGTCTTTCAAAGCGAAACCATGAAGCCTGTTAGAACTTCAGTTGAAGGTTCAATGCATGTAACATTGAAGCACAAACACTCTCTTGGAAATTACTTACCACAGAAAAGAATGTCTGATGTTTCGGAATGTGATGATTTCGAGTAA

mRNA sequence

ATGGAAGACGAAGATGAGATTGTCCCAGCCTCTGATTCTAGCGATTCAAGCGACGACTACATCGACATTAATGGTGAAGCCTTTCAGGATGAGGACGACGAAGAAGAACAATCCTCCAGTCTTTCCCCTTCATCTGACGAGGATCTAAAATCGAAGAACGTTGATGCCCTTTTGAGTGTAACTCTACCACCTGGGATTGATCCTTTGGTGTTGTGGCAACCCGAAGACTCTGAGCTTAATGTCACGAATTTAGCATCAATAACAGTTGATCCATTGCTAGTTCGTTTCCTTCGCCCTCATCAGAGAGAAGGTGTACAGTTCATGTTTGAATGTGTTTCCGGACTACATAAGGGGACAGACATATTTGGGTGCATTCTGGCGGATGATATGGGTTTAGGAAAAACATTGCAGTCGATCAGTTTGCTGTATACCCTTCTATGTCAAGGTTTTGATGGAAAGCCAATGGTTAAAAAGGCTATCATTGTTACACCTACTAGTCTCGTGAGTAATTGGGAGGCTGAAATTAAGAAGTGGGTTGGTGAAAGGGTTCACCTTATTGCTCTCTGTGAAAGTTCTAGAGAGGACGTTGTCTCTAGCATTGACAGCTTTGTACATCCCAAGAGTTCTTTACAGGTGCTGATTATTTCATATGAGACATTCCGTATGCATTCATCAAAGTTCAGCCAAAGTGAATCATGTGATTTACTCATATGCGATGAGGCTCACCGACTGAAGAATGATCAGACATTGACAAATCGGGCACTGGCTGCCCTGTCTTGCAGGCGTAGGGTTTTGTTATCAGGAACTCCAATGCAGAATGACCTAGAAGAGTTCTTTGCCATGGTTAACTTTACCAATCCAGGAATTTTGGGTGATGTTTCACATTTCCGTCGATATTATGAGGCACCAATTATTTGTGGGAGGGAACCTATTGCTACCGAGGAAGAGAAAAAGCTAGGTGCTCAACGCTCGACTGAACTAAGTGAAAAGGTTAATCAGTTTATCCTACGGAGGACTAATGCACTCTTATCAAATCACTTGCCACCAAAGATAGTTGAAGTCATTTGCTGCAAGTTGAGTCCTCTTCAAGCAGACCTATATAATCATTTTGTACAGTCAAAAAATGTTAGCTCGCTGCCTTGGGAGTCCAGGAACTTCAGGATTAGAGAGCTGTATTCGGTTTTTCCCTCCAGAGATGTTCTCTGGAAGGATGAGTTTGTTTTTCTATTGAGCAGCAAGGCTGGTGGATGTGGTCTGAATTTGATTGGTGGAAATCGTTTAGTTCTGTTTGATCCTGACTGGAACCCTGCGAATGATAAGCAAGCTGCTGCAAGAGTGTGGAGGGACGGACAAAAGAAGAGAGTATTCATCTACAGATTTTTAAGTACCGGAACGATTGAAGAAAAGGTGTACCAGCGACAAATGTCAAAAGAAGGGTTACAAAAAGTTATTCAGCAGGAGTCAACAAATAACCTTACGACCCAGGTGAACTTCCTTTCATCTGAGGATTTACGCGATTTATTCTCATTTCATGATAACGTTACCTTTGTTTTCTCAAATCAAGTTGATGGAAAGCTTGTACCCGTCGAATCGATGAGTAGTCCGAGGATGAAAGATGCAGAGGGAAATGGGAACAACTCCAGATTGAACCAAAACTCAAGACAGAAACCATTTTTACTATCTCAACATAGAAAACCTTTACAATCCATTACTTCTAATGAAGATCCCAACAAAGGTACATTAAAATTTACATCCACTGTCTTTCAAAGCGAAACCATGAAGCCTGTTAGAACTTCAGTTGAAGGTTCAATGCATGTAACATTGAAGCACAAACACTCTCTTGGAAATTACTTACCACAGAAAAGAATGTCTGATGTTTCGGAATGTGATGATTTCGAGTAA

Coding sequence (CDS)

ATGGAAGACGAAGATGAGATTGTCCCAGCCTCTGATTCTAGCGATTCAAGCGACGACTACATCGACATTAATGGTGAAGCCTTTCAGGATGAGGACGACGAAGAAGAACAATCCTCCAGTCTTTCCCCTTCATCTGACGAGGATCTAAAATCGAAGAACGTTGATGCCCTTTTGAGTGTAACTCTACCACCTGGGATTGATCCTTTGGTGTTGTGGCAACCCGAAGACTCTGAGCTTAATGTCACGAATTTAGCATCAATAACAGTTGATCCATTGCTAGTTCGTTTCCTTCGCCCTCATCAGAGAGAAGGTGTACAGTTCATGTTTGAATGTGTTTCCGGACTACATAAGGGGACAGACATATTTGGGTGCATTCTGGCGGATGATATGGGTTTAGGAAAAACATTGCAGTCGATCAGTTTGCTGTATACCCTTCTATGTCAAGGTTTTGATGGAAAGCCAATGGTTAAAAAGGCTATCATTGTTACACCTACTAGTCTCGTGAGTAATTGGGAGGCTGAAATTAAGAAGTGGGTTGGTGAAAGGGTTCACCTTATTGCTCTCTGTGAAAGTTCTAGAGAGGACGTTGTCTCTAGCATTGACAGCTTTGTACATCCCAAGAGTTCTTTACAGGTGCTGATTATTTCATATGAGACATTCCGTATGCATTCATCAAAGTTCAGCCAAAGTGAATCATGTGATTTACTCATATGCGATGAGGCTCACCGACTGAAGAATGATCAGACATTGACAAATCGGGCACTGGCTGCCCTGTCTTGCAGGCGTAGGGTTTTGTTATCAGGAACTCCAATGCAGAATGACCTAGAAGAGTTCTTTGCCATGGTTAACTTTACCAATCCAGGAATTTTGGGTGATGTTTCACATTTCCGTCGATATTATGAGGCACCAATTATTTGTGGGAGGGAACCTATTGCTACCGAGGAAGAGAAAAAGCTAGGTGCTCAACGCTCGACTGAACTAAGTGAAAAGGTTAATCAGTTTATCCTACGGAGGACTAATGCACTCTTATCAAATCACTTGCCACCAAAGATAGTTGAAGTCATTTGCTGCAAGTTGAGTCCTCTTCAAGCAGACCTATATAATCATTTTGTACAGTCAAAAAATGTTAGCTCGCTGCCTTGGGAGTCCAGGAACTTCAGGATTAGAGAGCTGTATTCGGTTTTTCCCTCCAGAGATGTTCTCTGGAAGGATGAGTTTGTTTTTCTATTGAGCAGCAAGGCTGGTGGATGTGGTCTGAATTTGATTGGTGGAAATCGTTTAGTTCTGTTTGATCCTGACTGGAACCCTGCGAATGATAAGCAAGCTGCTGCAAGAGTGTGGAGGGACGGACAAAAGAAGAGAGTATTCATCTACAGATTTTTAAGTACCGGAACGATTGAAGAAAAGGTGTACCAGCGACAAATGTCAAAAGAAGGGTTACAAAAAGTTATTCAGCAGGAGTCAACAAATAACCTTACGACCCAGGTGAACTTCCTTTCATCTGAGGATTTACGCGATTTATTCTCATTTCATGATAACGTTACCTTTGTTTTCTCAAATCAAGTTGATGGAAAGCTTGTACCCGTCGAATCGATGAGTAGTCCGAGGATGAAAGATGCAGAGGGAAATGGGAACAACTCCAGATTGAACCAAAACTCAAGACAGAAACCATTTTTACTATCTCAACATAGAAAACCTTTACAATCCATTACTTCTAATGAAGATCCCAACAAAGGTACATTAAAATTTACATCCACTGTCTTTCAAAGCGAAACCATGAAGCCTGTTAGAACTTCAGTTGAAGGTTCAATGCATGTAACATTGAAGCACAAACACTCTCTTGGAAATTACTTACCACAGAAAAGAATGTCTGATGTTTCGGAATGTGATGATTTCGAGTAA

Protein sequence

MEDEDEIVPASDSSDSSDDYIDINGEAFQDEDDEEEQSSSLSPSSDEDLKSKNVDALLSVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKGTDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDLLICDEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRRYYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCKLSPLQADLYNHFVQSKNVSSLPWESRNFRIRELYSVFPSRDVLWKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFLLSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLPQKRMSDVSECDDFE*
Homology
[Close]
BLAST of Cucsa.244330 vs. Swiss-Prot
Match: CHR25_ARATH (Protein CHROMATIN REMODELING 25 OS=Arabidopsis thaliana GN=CHR25 PE=1 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 6.6e-148
Identity = 255/317 (80.44%), Postives = 284/317 (89.59%), Query Frame = 1 

Query: 60  VTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKGT 119
           V LPP I+PLVLWQ E+    ++N+ +I V  +LV+FLRPHQREGVQFMF+CVSGLH   
Sbjct: 145 VCLPPDIEPLVLWQSEED--GMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSA 204

Query: 120 DIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 179
           +I GCILADDMGLGKTLQSI+LLYTLLCQGFDG PMVKKAIIVTPTSLVSNWEAEIKKWV
Sbjct: 205 NINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWV 264

Query: 180 GERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDLLICD 239
           G+R+ LIALCES+R+DV+S IDSF  P+S+LQVLIISYETFRMHSSKF QSESCDLLICD
Sbjct: 265 GDRIQLIALCESTRDDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICD 324

Query: 240 EAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRRY 299
           EAHRLKNDQTLTNRALA+L+C+RRVLLSGTPMQNDLEEFFAMVNFTNPG LGD +HFR Y
Sbjct: 325 EAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHY 384

Query: 300 YEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCKL 359
           YEAPIICGREP ATEEEK L A RS ELS KVNQFILRRTNALLSNHLPPKI+EV+CCK+
Sbjct: 385 YEAPIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKM 444

Query: 360 SPLQADLYNHFVQSKNV 377
           + LQ+ LYNHF+ SKN+
Sbjct: 445 TTLQSTLYNHFISSKNL 459


HSP 2 Score: 204.9 bits (520), Expect = 2.6e-51
Identity = 108/152 (71.05%), Postives = 115/152 (75.66%), Query Frame = 1 

Query: 403 KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS 462
           KDEF FLLSSKAGGCGLNLIG NRLVLFDPDWNPANDKQAAARVWRDGQKKRV++YRFLS
Sbjct: 602 KDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLS 661

Query: 463 TGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVTFVFSNQV 522
           TGTIEEKVYQRQMSKEGLQKVIQ E T+N T Q N LS+EDLRDLFSFH +V        
Sbjct: 662 TGTIEEKVYQRQMSKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFSFHGDVRSEIH--- 721

Query: 523 DGKLVPVESMSSPR-MKDAEGNGNNSRLNQNS 554
                  E MS  R   DA G  N    N+N+
Sbjct: 722 -------EKMSCSRCQNDASGTENIEEGNENN 743


HSP 3 Score: 59.7 bits (143), Expect = 1.3e-07
Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 1 

Query: 512 DNVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFLLSQHRKPLQSIT 571
           D VTFVF+NQVDGKLVP+ES  SP+  ++E +  N  +N+ +  KP    + R+PLQ ++
Sbjct: 807 DEVTFVFTNQVDGKLVPIESNVSPKTVESEEHNRNQPVNKRAFNKP--QQRPREPLQPLS 866

Query: 572 SNE 575
            NE
Sbjct: 867 LNE 867


HSP 4 Score: 46.2 bits (108), Expect = 1.5e-03
Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 1 

Query: 2  EDEDEIVPASDSSDSSDDYIDINGEAFQDEDDEE-EQSSSLSPSSDEDLKSKNVDALLSV 61
          E+++EI+ +SD  DSSD Y D + ++  + D+ E E  + +S SSD D KSKNV  LL  
Sbjct: 3  EEDEEILSSSDCDDSSDSYKDDSQDSEGENDNPECEDLAVVSLSSDADRKSKNVKDLLRG 62

Query: 62 TLPPGIDPLV 71
           L     PL+
Sbjct: 63 NLVVQRQPLL 72

[Close]
BLAST of Cucsa.244330 vs. Swiss-Prot
Match: RAD54_ORYSJ (DNA repair and recombination protein RAD54 OS=Oryza sativa subsp. japonica GN=RAD54 PE=1 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 9.2e-142
Identity = 246/336 (73.21%), Postives = 286/336 (85.12%), Query Frame = 1 

Query: 44  SSDEDLKSKNVDALLSVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQRE 103
           SSD+ ++++        +LPPGI+PL+LWQPE  +   +N ++I VD LLVR+LRPHQRE
Sbjct: 189 SSDDSVENEE-------SLPPGIEPLILWQPEGRDKENSNFSAIKVDHLLVRYLRPHQRE 248

Query: 104 GVQFMFECVSGLHKGTDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVT 163
           GVQFMF+CVSGL     I GCILADDMGLGKTLQSI+LLYTLLCQGFD KPMVK+A++VT
Sbjct: 249 GVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVT 308

Query: 164 PTSLVSNWEAEIKKWVGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMH 223
           PTSLVSNWE+EI KW+  RV L+ALCES+R DV+S I+SF+ P S LQVLI+SYETFRMH
Sbjct: 309 PTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSGIESFLKPLSRLQVLIVSYETFRMH 368

Query: 224 SSKFSQSESCDLLICDEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVN 283
           SSKF +  SCDLLICDEAHRLKNDQTLTN+ALAAL C+RR+LLSGTPMQNDLEEFF+MVN
Sbjct: 369 SSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVN 428

Query: 284 FTNPGILGDVSHFRRYYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALL 343
           FTNPG+LGD ++FRRYYEAPIICGREP A+ EEK LG++RS ELS KVN FILRRTNALL
Sbjct: 429 FTNPGVLGDATYFRRYYEAPIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALL 488

Query: 344 SNHLPPKIVEVICCKLSPLQADLYNHFVQSKNVSSL 380
           SNHLPPKIVEV+CCKL+ LQ  LYNHF+ SKNV  L
Sbjct: 489 SNHLPPKIVEVVCCKLTALQTALYNHFIHSKNVKRL 517


HSP 2 Score: 193.0 bits (489), Expect = 1.0e-47
Identity = 93/112 (83.04%), Postives = 103/112 (91.96%), Query Frame = 1 

Query: 403 KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS 462
           +DEFVFLLSSKAGGCGLNL+GGNRL+LFDPDWNPANDKQAAARVWRDGQKKRV+IYRFLS
Sbjct: 657 RDEFVFLLSSKAGGCGLNLVGGNRLILFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLS 716

Query: 463 TGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNV 515
           TGTIEEKVYQRQMSKEGLQKVIQQE  +    Q + LS+EDLRDLF+FH+ +
Sbjct: 717 TGTIEEKVYQRQMSKEGLQKVIQQEQADG-KMQGSSLSTEDLRDLFTFHEQI 767


HSP 3 Score: 40.4 bits (93), Expect = 8.4e-02
Identity = 17/22 (77.27%), Postives = 21/22 (95.45%), Query Frame = 1 

Query: 512 DNVTFVFSNQVDGKLVPVESMS 534
           D V+FVF+NQ+DGKLVPVESM+
Sbjct: 864 DEVSFVFTNQIDGKLVPVESMA 885

[Close]
BLAST of Cucsa.244330 vs. Swiss-Prot
Match: RAD54_HUMAN (DNA repair and recombination protein RAD54-like OS=Homo sapiens GN=RAD54L PE=1 SV=2)

HSP 1 Score: 283.1 bits (723), Expect = 7.5e-75
Identity = 144/316 (45.57%), Postives = 220/316 (69.62%), Query Frame = 1 

Query: 67  DPLVLWQP------EDSELNVTNL-ASITVDPLLVRFLRPHQREGVQFMFECVSGLHKGT 126
           D LVL++P      +  +L+   L   + VDP+L + LRPHQREGV+F++ECV+   +  
Sbjct: 116 DALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS-RRIP 175

Query: 127 DIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 186
              GCI+AD+MGLGKTLQ I+L++TLL Q  + KP + KA++V+P+SLV NW  E+ KW+
Sbjct: 176 GSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWL 235

Query: 187 GERVHLIALCESSREDVVSSIDSFVHPKS---SLQVLIISYETFRMHSSKFSQSESCDLL 246
           G R+  +A+   S++++   ++ F++ +    S  +LIISYETFR+H     Q  S  L+
Sbjct: 236 GGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVL-QKGSVGLV 295

Query: 247 ICDEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHF 306
           ICDE HRLKN +  T +AL +L+  RRVL+SGTP+QNDL E+F++V+F N GILG    F
Sbjct: 296 ICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEF 355

Query: 307 RRYYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVIC 366
           ++++E PI+ GR+  A+E +++LG +R  EL+  VN+ ++RRT+ +LS +LP KI +V+C
Sbjct: 356 KKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVC 415

Query: 367 CKLSPLQADLYNHFVQ 373
           C+L+PLQ +LY  F++
Sbjct: 416 CRLTPLQTELYKRFLR 429


HSP 2 Score: 132.5 bits (332), Expect = 1.6e-29
Identity = 60/83 (72.29%), Postives = 69/83 (83.13%), Query Frame = 1 

Query: 405 EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTG 464
           +FVF+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA ARVWRDGQKK  +IYR LS G
Sbjct: 566 DFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAG 625

Query: 465 TIEEKVYQRQMSKEGLQKVIQQE 488
           TIEEK++QRQ  K+ L   +  E
Sbjct: 626 TIEEKIFQRQSHKKALSSCVVDE 648

[Close]
BLAST of Cucsa.244330 vs. Swiss-Prot
Match: RAD54_DROWI (DNA repair and recombination protein RAD54-like OS=Drosophila willistoni GN=okr PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.8e-74
Identity = 148/324 (45.68%), Postives = 218/324 (67.28%), Query Frame = 1 

Query: 63  PPGIDPLVLWQP------EDSELNVTN-LASITVDPLLVRFLRPHQREGVQFMFECVSGL 122
           P   + LVL+ P      E  +++ T  L  + VDPLL   LRPHQREGV+FM++CV G 
Sbjct: 112 PQACNALVLYTPPVYSEHERMKMDPTKILVHVVVDPLLSNILRPHQREGVRFMYDCVEG- 171

Query: 123 HKGTDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEI 182
            K  +  GCI+AD+MGLGKTLQ ++L++TLL Q  + KP + KAIIV+P+SLV NWE E 
Sbjct: 172 -KKGNFNGCIMADEMGLGKTLQCVTLVWTLLRQSCECKPTITKAIIVSPSSLVKNWEKEF 231

Query: 183 KKWVGERVHLIALCESSREDVVSSIDSFVHPKSS---LQVLIISYETFRMHSSKFSQSES 242
            KW+  R+H +A+   S+ED + +++ F    S+     VL+ISYETFR++++   Q+E 
Sbjct: 232 TKWLHGRMHCLAMEGGSKEDTIKALEQFSMNTSTRLGTPVLLISYETFRIYANILCQNE- 291

Query: 243 CDLLICDEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGD 302
             ++ICDE HRLKN   LT +AL  L  +RRVLLSGTP+QNDL E+F++VNF NP +LG 
Sbjct: 292 VGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGT 351

Query: 303 VSHFRRYYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIV 362
            + F+R +E PI+ G+   ++++E++   +++ EL   VNQ I+RRTN +L+ +LP K  
Sbjct: 352 AADFKRNFENPILKGQNTDSSDKERERALEKTQELIGLVNQCIIRRTNQILTKYLPVKFE 411

Query: 363 EVICCKLSPLQADLYNHFVQSKNV 377
            VIC +L+ +Q + Y +F++S  V
Sbjct: 412 MVICVRLTSVQLEFYTNFLKSDKV 432


HSP 2 Score: 135.2 bits (339), Expect = 2.5e-30
Identity = 66/111 (59.46%), Postives = 84/111 (75.68%), Query Frame = 1 

Query: 404 DEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLST 463
           D F+F+LSSKAGGCGLNLIG NRL +FDPDWNPAND+QA ARVWRDGQKK  +IYR +++
Sbjct: 566 DCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVAS 625

Query: 464 GTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNV 515
           G+IEEK+ QRQ  K+ L   I     NN + + +F + +DL+DLFSF   +
Sbjct: 626 GSIEEKILQRQTHKKSLSSTI---IDNNESAEKHF-TRDDLKDLFSFDSKI 672

[Close]
BLAST of Cucsa.244330 vs. Swiss-Prot
Match: RAD54_CHICK (DNA repair and recombination protein RAD54-like (Fragment) OS=Gallus gallus GN=RAD54L PE=2 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.3e-74
Identity = 143/297 (48.15%), Postives = 212/297 (71.38%), Query Frame = 1 

Query: 87  ITVDPLLVRFLRPHQREGVQFMFECVSGLHKGTDIFGCILADDMGLGKTLQSISLLYTLL 146
           + VDP+L R LRPHQREGV+F+++CV+   +     GCI+AD+MGLGKTLQ I+L++TLL
Sbjct: 132 VVVDPVLSRVLRPHQREGVKFLWDCVTS-RRIPGSHGCIMADEMGLGKTLQCITLMWTLL 191

Query: 147 CQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGERVHLIALCESSREDVVSSIDSFVHP 206
            Q  D KP ++KA++V+P+SLV NW  E++KW+G R+  +A+   S+E++   +   ++ 
Sbjct: 192 RQSPDCKPEIEKAMVVSPSSLVRNWYNEVEKWLGGRIQPLAIDGGSKEEIDRKLVGSMNQ 251

Query: 207 KS---SLQVLIISYETFRMHSSKFSQSESCDLLICDEAHRLKNDQTLTNRALAALSCRRR 266
           +       +LIISYETFR+H+    Q  S  L+ICDE HRLKN +  T +AL +L+  RR
Sbjct: 252 RGLRVPSPILIISYETFRLHAEAL-QKGSVGLVICDEGHRLKNSENQTYQALNSLNTPRR 311

Query: 267 VLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRRYYEAPIICGREPIATEEEKKLGAQR 326
           VL+SGTP+QNDL E+F++V+F N GILG    F+R++E PI+ GR+  A+E E++ G +R
Sbjct: 312 VLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKRHFELPILKGRDADASEAERQKGEER 371

Query: 327 STELSEKVNQFILRRTNALLSNHLPPKIVEVICCKLSPLQADLYNHFV-QSKNVSSL 380
             EL   VN+ ++RRT+ +LS +LP KI +V+CC+L+PLQA+LY +F+ Q+K V  L
Sbjct: 372 LKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQAELYKNFLKQAKPVEEL 426


HSP 2 Score: 137.9 bits (346), Expect = 3.9e-31
Identity = 66/108 (61.11%), Postives = 81/108 (75.00%), Query Frame = 1 

Query: 405 EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTG 464
           EF+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND+QA ARVWRDGQKK  +IYR LSTG
Sbjct: 555 EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTG 614

Query: 465 TIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHD 513
           TIEEK++QRQ  K+ L   +  E  +         S  +L++LFS ++
Sbjct: 615 TIEEKIFQRQTHKKALSSCVVDEEQD----VERHFSLGELKELFSLNE 658

[Close]
BLAST of Cucsa.244330 vs. TrEMBL
Match: A0A0A0L9A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207350 PE=4 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 7.8e-180
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 1 

Query: 59  SVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKG 118
           SVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKG
Sbjct: 143 SVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKG 202

Query: 119 TDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 178
           TDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW
Sbjct: 203 TDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 262

Query: 179 VGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDLLIC 238
           VGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDLLIC
Sbjct: 263 VGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDLLIC 322

Query: 239 DEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRR 298
           DEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRR
Sbjct: 323 DEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRR 382

Query: 299 YYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCK 358
           YYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCK
Sbjct: 383 YYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCK 442

Query: 359 LSPLQADLYNHFVQSKNV 377
           LSPLQADLYNHFVQSKNV
Sbjct: 443 LSPLQADLYNHFVQSKNV 460

[Close]
BLAST of Cucsa.244330 vs. TrEMBL
Match: A0A0A0L9A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207350 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 8.6e-62
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 1 

Query: 512 DNVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFLLSQHRKPLQSIT 571
           D VTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFLLSQHRKPLQSIT
Sbjct: 807 DEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFLLSQHRKPLQSIT 866

Query: 572 SNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLPQKRMSDVSECDD 631
           SNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLPQKRMSDVSECDD
Sbjct: 867 SNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLPQKRMSDVSECDD 926

Query: 632 FE 634
           FE
Sbjct: 927 FE 928


HSP 2 Score: 229.2 bits (583), Expect = 1.4e-56
Identity = 113/114 (99.12%), Postives = 113/114 (99.12%), Query Frame = 1 

Query: 401 LWKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF 460
           L KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF
Sbjct: 601 LSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF 660

Query: 461 LSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNV 515
           LSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNV
Sbjct: 661 LSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNV 714


HSP 3 Score: 115.9 bits (289), Expect = 1.8e-22
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 1  MEDEDEIVPASDSSDSSDDYIDINGEAFQDEDDEEEQSSSLSPSSDEDLKSKNVDALL 59
          MEDEDEIVPASDSSDSSDDYIDINGEAFQDEDDEEEQSSSLSPSSDEDLKSKNVDALL
Sbjct: 1  MEDEDEIVPASDSSDSSDDYIDINGEAFQDEDDEEEQSSSLSPSSDEDLKSKNVDALL 58


HSP 4 Score: 562.4 bits (1448), Expect = 7.1e-157
Identity = 270/318 (84.91%), Postives = 295/318 (92.77%), Query Frame = 1 

Query: 59  SVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKG 118
           SVTLPPGIDPLVLWQPE+ E    N+  I VDP+LVRFLRPHQREGVQFMFECVSGL+  
Sbjct: 153 SVTLPPGIDPLVLWQPEEFEDGTANMMQIVVDPVLVRFLRPHQREGVQFMFECVSGLNSA 212

Query: 119 TDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 178
            +I+GCILADDMGLGKTLQSI+LLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW
Sbjct: 213 ANIYGCILADDMGLGKTLQSITLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 272

Query: 179 VGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDLLIC 238
           VGERVHLIALCES+R+DVVS ID F  P+S +QVLIISYETFRMHS+KFSQSESCDLLIC
Sbjct: 273 VGERVHLIALCESTRDDVVSGIDRFTGPRSPIQVLIISYETFRMHSTKFSQSESCDLLIC 332

Query: 239 DEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRR 298
           DEAHRLKNDQT+TN+ALAAL+C+RR+LLSGTPMQNDLEEFFAMVNFTNPGILG+ +HFRR
Sbjct: 333 DEAHRLKNDQTMTNQALAALACKRRILLSGTPMQNDLEEFFAMVNFTNPGILGEAAHFRR 392

Query: 299 YYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCK 358
           YYEAPIICGREP A+EEEKKLG +RS ELS KVNQFILRRTNALLSNHLPPKI+EV+CCK
Sbjct: 393 YYEAPIICGREPNASEEEKKLGGERSAELSGKVNQFILRRTNALLSNHLPPKIIEVVCCK 452

Query: 359 LSPLQADLYNHFVQSKNV 377
           L+PLQ DLYNHF+ SKNV
Sbjct: 453 LTPLQLDLYNHFIHSKNV 470

[Close]
BLAST of Cucsa.244330 vs. TrEMBL
Match: M5W573_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024484mg PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 3.3e-29
Identity = 77/143 (53.85%), Postives = 90/143 (62.94%), Query Frame = 1 

Query: 403 KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS 462
           KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ                     
Sbjct: 570 KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQ--------------------- 629

Query: 463 TGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVTFVFSNQV 522
                  VYQRQMSKEGLQKVIQQE T++   Q N LS+EDLRDLF+FH+NV      ++
Sbjct: 630 -------VYQRQMSKEGLQKVIQQEQTDSSMAQGNLLSTEDLRDLFTFHENVRSEVHEKM 682

Query: 523 DGKLVPVESMSSPRMKDAEGNGN 546
           +   +  ++ +      AEG+ N
Sbjct: 690 N--CIRCQNSNDTNRSIAEGDAN 682


HSP 2 Score: 109.0 bits (271), Expect = 2.1e-20
Identity = 59/119 (49.58%), Postives = 80/119 (67.23%), Query Frame = 1 

Query: 514 VTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFLLSQHRKPLQSITSN 573
           VTFVF+NQVDGKLVPVES  +P+M+  EG  N+ +L Q+  QKP LLS  RKPL+S++S+
Sbjct: 751 VTFVFTNQVDGKLVPVESKVNPKMQGEEGKENHPKLRQDLNQKPLLLSWQRKPLESVSSS 810

Query: 574 EDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLPQKRMS-DVSECDD 632
           E+  + T+       +  T++ V+TS++GS+HV LK K SL   LP KR S D    DD
Sbjct: 811 ENSTRSTMSAPFKPSEKTTVESVKTSLKGSVHVALKPKLSLKIRLPLKRSSPDTDNHDD 869


HSP 3 Score: 555.1 bits (1429), Expect = 1.1e-154
Identity = 271/318 (85.22%), Postives = 291/318 (91.51%), Query Frame = 1 

Query: 59  SVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKG 118
           SVTLPPGIDPLVLWQPE+SE  V NL  I VDPLLVRFLRPHQREGVQFMFECVSG +  
Sbjct: 145 SVTLPPGIDPLVLWQPEESEDGVGNLMPIVVDPLLVRFLRPHQREGVQFMFECVSGFYST 204

Query: 119 TDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 178
            +I GCILADDMGLGKTLQSI+LLYTLL QGFDGKPMVKK II TPTSLVSNWEAEIKKW
Sbjct: 205 ANINGCILADDMGLGKTLQSITLLYTLLGQGFDGKPMVKKIIIATPTSLVSNWEAEIKKW 264

Query: 179 VGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDLLIC 238
           VGERV LIALCES+REDV+S IDSF +P S  QVLI+SYETFRMHSSKFS SESCDLLIC
Sbjct: 265 VGERVKLIALCESTREDVISGIDSFTNPSSPFQVLIVSYETFRMHSSKFSNSESCDLLIC 324

Query: 239 DEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRR 298
           DEAHRLKNDQT+TNRALA+LSC+RR+LLSGTPMQNDLEEFFAMVNFTNPG+LGD ++FRR
Sbjct: 325 DEAHRLKNDQTITNRALASLSCKRRILLSGTPMQNDLEEFFAMVNFTNPGVLGDAAYFRR 384

Query: 299 YYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCK 358
           YYE PIICGREP ATEEEKKLGA+RS ELS KVNQFILRRTNALLSNHLPPKIVEV+CCK
Sbjct: 385 YYETPIICGREPTATEEEKKLGAERSGELSVKVNQFILRRTNALLSNHLPPKIVEVVCCK 444

Query: 359 LSPLQADLYNHFVQSKNV 377
           L+PLQA+LYNHF+ SKNV
Sbjct: 445 LTPLQAELYNHFIHSKNV 462

[Close]
BLAST of Cucsa.244330 vs. TrEMBL
Match: U5GLI1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s14870g PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 7.1e-48
Identity = 96/112 (85.71%), Postives = 104/112 (92.86%), Query Frame = 1 

Query: 403 KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS 462
           K+EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV+IYRFLS
Sbjct: 605 KEEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLS 664

Query: 463 TGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNV 515
           TGTIEEKVYQRQMSKEGLQK+IQ E  ++L  Q N LS+EDLRDLF+F +NV
Sbjct: 665 TGTIEEKVYQRQMSKEGLQKIIQHEQNDSLAAQENCLSTEDLRDLFTFQENV 716


HSP 2 Score: 87.0 bits (214), Expect = 8.7e-14
Identity = 52/124 (41.94%), Postives = 73/124 (58.87%), Query Frame = 1 

Query: 512 DNVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFLLSQHRKPLQSIT 571
           D V+FVF+NQVDGKLVP+ES  SPR+   +GN +     +N  Q P  LS+++KP QS++
Sbjct: 810 DEVSFVFTNQVDGKLVPIESKPSPRVLGIKGNESRLNDKENLDQNP-KLSRYQKPQQSLS 869

Query: 572 SNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLPQKR--MSDVSEC 631
           SN D  K     +    Q   +K +RT ++G  +  LK K S G+ LP KR   SD+   
Sbjct: 870 SNIDAKKVAPSASLMTLQRPGVKRMRTPLKGMANAELKSKLSFGSQLPLKRPSPSDLEHD 929

Query: 632 DDFE 634
           D F+
Sbjct: 930 DSFQ 932


HSP 3 Score: 41.6 bits (96), Expect = 4.2e+00
Identity = 25/57 (43.86%), Postives = 35/57 (61.40%), Query Frame = 1 

Query: 2  EDEDEIVPASDSSDSSDDYIDINGEAFQDEDDEEEQSSSLSPSSDEDLKSKNVDALL 59
          E+E+ + P    SDSSD+Y  ++ E   D+ +E E+  +  P  DED KSKNVD LL
Sbjct: 9  EEEESLSP----SDSSDEYT-VDREEEDDDGEEGERRVAHYPQFDEDRKSKNVDDLL 60


HSP 4 Score: 552.0 bits (1421), Expect = 9.6e-154
Identity = 270/316 (85.44%), Postives = 290/316 (91.77%), Query Frame = 1 

Query: 61  TLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKGTD 120
           TLPPG+DPLVLWQPE+ + +  NL  ITVDPLLVRFLRPHQREGVQFMFECVSGL     
Sbjct: 148 TLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLLVRFLRPHQREGVQFMFECVSGLLNAAG 207

Query: 121 IFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG 180
           I GCILADDMGLGKTLQSI+LLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG
Sbjct: 208 IHGCILADDMGLGKTLQSIALLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVG 267

Query: 181 ERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDLLICDE 240
            RV LIALCES+R+DVVS IDSF  P SSLQVLI+SYETFRMHSSKFS SESCDLLICDE
Sbjct: 268 GRVQLIALCESTRDDVVSGIDSFTDPCSSLQVLIVSYETFRMHSSKFSCSESCDLLICDE 327

Query: 241 AHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRRYY 300
           AHRLKNDQTLTNRALAALSC+RR+LLSGTPMQNDLEEFFAMVNFTNPGILGD ++FRRYY
Sbjct: 328 AHRLKNDQTLTNRALAALSCKRRILLSGTPMQNDLEEFFAMVNFTNPGILGDAAYFRRYY 387

Query: 301 EAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCKLS 360
           E  IICGREP ATEEEKKLG +RS+ELS KVNQFILRRTNALLSNHLPPKI+EV+CCKL+
Sbjct: 388 ETSIICGREPTATEEEKKLGIERSSELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLT 447

Query: 361 PLQADLYNHFVQSKNV 377
           PLQ++LYNHF+ SKNV
Sbjct: 448 PLQSELYNHFIHSKNV 463

[Close]
BLAST of Cucsa.244330 vs. TrEMBL
Match: V4S769_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027772mg PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 6.8e-51
Identity = 102/112 (91.07%), Postives = 108/112 (96.43%), Query Frame = 1 

Query: 403 KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS 462
           K+EFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS
Sbjct: 606 KNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS 665

Query: 463 TGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNV 515
           TGTIEEKVYQRQMSKEGLQKVIQQE T++  TQ NFLS+EDLRDLF+FHD+V
Sbjct: 666 TGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDV 717


HSP 2 Score: 87.4 bits (215), Expect = 6.7e-14
Identity = 64/154 (41.56%), Postives = 83/154 (53.90%), Query Frame = 1 

Query: 486 QESTNNLTTQVNFLSSEDLRDLFSFHDNVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGN 545
           +E  NN       +S  D     S  D VTFVF+NQVDGKLVP+ES  SP+M+  EGN N
Sbjct: 787 EEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTNQVDGKLVPIESKVSPKMQATEGNKN 846

Query: 546 NSRLNQNSR----QKPFLLSQHRKPLQSITSNEDPNKGTLKFTSTVFQSETMKPVRTSVE 605
            +    N +    Q+  LLSQH K L+ + S E+  K +L        S   K +RTS++
Sbjct: 847 PNNHITNPKPKLDQRSKLLSQHHKLLKDVPSLENSAKFSLS------ASSQPKSMRTSLK 906

Query: 606 GSMHVTLKHKHSLGNYLPQKRMS--DVSECDDFE 634
           G+    +K K S GN LP KR S  +V   DDFE
Sbjct: 907 GA----IKPKLSFGNQLPLKRFSPDNVEHDDDFE 930


HSP 3 Score: 52.4 bits (124), Expect = 2.4e-03
Identity = 30/61 (49.18%), Postives = 43/61 (70.49%), Query Frame = 1 

Query: 1  MEDEDEIVPASDSSDSSDDY-IDINGEAFQDEDDEEEQSSSLSPS--SDEDLKSKNVDAL 59
          MED++EI+  SD SDSSD   ID     + D++D+ ++ +S++ S  SDED KSKNVDAL
Sbjct: 1  MEDDEEILSDSDPSDSSDRCTIDREDADYNDDNDDGDEEASVADSAPSDEDRKSKNVDAL 60


HSP 4 Score: 551.6 bits (1420), Expect = 1.3e-153
Identity = 269/317 (84.86%), Postives = 291/317 (91.80%), Query Frame = 1 

Query: 60  VTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKGT 119
           VTLPPG+DPLVLWQPE+SE    NL  I VDPLLVRFLRPHQREGVQFMFECVSGL+   
Sbjct: 161 VTLPPGVDPLVLWQPEESEDGPNNLVPIAVDPLLVRFLRPHQREGVQFMFECVSGLYSAA 220

Query: 120 DIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 179
           +I+GCILADDMGLGKTLQSI+LLYTLL QGFDGKPMVKKAIIVTPTSLVSNWEAEI KWV
Sbjct: 221 NIYGCILADDMGLGKTLQSIALLYTLLRQGFDGKPMVKKAIIVTPTSLVSNWEAEINKWV 280

Query: 180 GERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDLLICD 239
           GERV LIALCESSR+DVV  IDSF  P SSLQVLI+SYETFRMHSSKF QSESCDLLICD
Sbjct: 281 GERVQLIALCESSRDDVVCGIDSFTSPCSSLQVLIVSYETFRMHSSKFCQSESCDLLICD 340

Query: 240 EAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRRY 299
           EAHRLKNDQT+TNRALAALSC+RR+LLSGTPMQNDLEEFFAMVNFTN GILGDV++FRRY
Sbjct: 341 EAHRLKNDQTITNRALAALSCKRRILLSGTPMQNDLEEFFAMVNFTNQGILGDVAYFRRY 400

Query: 300 YEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCKL 359
           YEAPIICGREP A+EEEK L ++RS+ELS KVNQFILRRTN LLSNHLPPKIVEV+CCKL
Sbjct: 401 YEAPIICGREPTASEEEKMLASERSSELSAKVNQFILRRTNVLLSNHLPPKIVEVVCCKL 460

Query: 360 SPLQADLYNHFVQSKNV 377
           +PLQ++LYNHF+ SKNV
Sbjct: 461 TPLQSELYNHFIHSKNV 477

[Close]
BLAST of Cucsa.244330 vs. TAIR10
Match: AT3G19210.1 (AT3G19210.1 homolog of RAD54)

HSP 1 Score: 525.8 bits (1353), Expect = 3.7e-149
Identity = 255/317 (80.44%), Postives = 284/317 (89.59%), Query Frame = 1 

Query: 60  VTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKGT 119
           V LPP I+PLVLWQ E+    ++N+ +I V  +LV+FLRPHQREGVQFMF+CVSGLH   
Sbjct: 145 VCLPPDIEPLVLWQSEED--GMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSA 204

Query: 120 DIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWV 179
           +I GCILADDMGLGKTLQSI+LLYTLLCQGFDG PMVKKAIIVTPTSLVSNWEAEIKKWV
Sbjct: 205 NINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWV 264

Query: 180 GERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDLLICD 239
           G+R+ LIALCES+R+DV+S IDSF  P+S+LQVLIISYETFRMHSSKF QSESCDLLICD
Sbjct: 265 GDRIQLIALCESTRDDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICD 324

Query: 240 EAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRRY 299
           EAHRLKNDQTLTNRALA+L+C+RRVLLSGTPMQNDLEEFFAMVNFTNPG LGD +HFR Y
Sbjct: 325 EAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHY 384

Query: 300 YEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCKL 359
           YEAPIICGREP ATEEEK L A RS ELS KVNQFILRRTNALLSNHLPPKI+EV+CCK+
Sbjct: 385 YEAPIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKM 444

Query: 360 SPLQADLYNHFVQSKNV 377
           + LQ+ LYNHF+ SKN+
Sbjct: 445 TTLQSTLYNHFISSKNL 459


HSP 2 Score: 204.9 bits (520), Expect = 1.5e-52
Identity = 108/152 (71.05%), Postives = 115/152 (75.66%), Query Frame = 1 

Query: 403 KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS 462
           KDEF FLLSSKAGGCGLNLIG NRLVLFDPDWNPANDKQAAARVWRDGQKKRV++YRFLS
Sbjct: 602 KDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLS 661

Query: 463 TGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVTFVFSNQV 522
           TGTIEEKVYQRQMSKEGLQKVIQ E T+N T Q N LS+EDLRDLFSFH +V        
Sbjct: 662 TGTIEEKVYQRQMSKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFSFHGDVRSEIH--- 721

Query: 523 DGKLVPVESMSSPR-MKDAEGNGNNSRLNQNS 554
                  E MS  R   DA G  N    N+N+
Sbjct: 722 -------EKMSCSRCQNDASGTENIEEGNENN 743


HSP 3 Score: 59.7 bits (143), Expect = 7.6e-09
Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 1 

Query: 512 DNVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFLLSQHRKPLQSIT 571
           D VTFVF+NQVDGKLVP+ES  SP+  ++E +  N  +N+ +  KP    + R+PLQ ++
Sbjct: 807 DEVTFVFTNQVDGKLVPIESNVSPKTVESEEHNRNQPVNKRAFNKP--QQRPREPLQPLS 866

Query: 572 SNE 575
            NE
Sbjct: 867 LNE 867


HSP 4 Score: 46.2 bits (108), Expect = 8.7e-05
Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 1 

Query: 2  EDEDEIVPASDSSDSSDDYIDINGEAFQDEDDEE-EQSSSLSPSSDEDLKSKNVDALLSV 61
          E+++EI+ +SD  DSSD Y D + ++  + D+ E E  + +S SSD D KSKNV  LL  
Sbjct: 3  EEDEEILSSSDCDDSSDSYKDDSQDSEGENDNPECEDLAVVSLSSDADRKSKNVKDLLRG 62

Query: 62 TLPPGIDPLV 71
           L     PL+
Sbjct: 63 NLVVQRQPLL 72

[Close]
BLAST of Cucsa.244330 vs. TAIR10
Match: AT1G08600.3 (AT1G08600.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 168.3 bits (425), Expect = 1.5e-41
Identity = 106/297 (35.69%), Postives = 162/297 (54.55%), Query Frame = 1 

Query: 97   LRPHQREGVQFMFE----CVSGLHKGTDIFGCILADDMGLGKTLQSISLLYTLL-CQGFD 156
            L+ HQ  G++FM+E     +S +  G    GCILA  MGLGKT Q I+ LYT + C    
Sbjct: 719  LKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLG 778

Query: 157  GKPMVKKAIIVTPTSLVSNWEAEIKKWVGERV---HLIALCESSREDVVSSIDSFVHPKS 216
                +K A+IVTP +++ NW +E +KW+   V    +  L + SRE      D     + 
Sbjct: 779  ----LKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRE---RRFDLLTKWRK 838

Query: 217  SLQVLIISYETFR----------MHSSKF---SQSESCDLLICDEAHRLKNDQTLTNRAL 276
               V ++ Y  FR          +++++    +  +  D+L+CDEAH +KN +  T +AL
Sbjct: 839  KGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTTQAL 898

Query: 277  AALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRRYYEAPIICGREPIATEE 336
              + C+RR+ L+G+P+QN+L E++ MV+F   G LG    FR  ++ PI  G+   +T E
Sbjct: 899  KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAE 958

Query: 337  EKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCKLSPLQADLYNHFVQ 373
            + K+  QRS  L E++  F+ R    ++   LPPK V VI  KLSPLQ  LY  F++
Sbjct: 959  DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFLE 1008


HSP 2 Score: 97.1 bits (240), Expect = 4.3e-20
Identity = 47/106 (44.34%), Postives = 69/106 (65.09%), Query Frame = 1 

Query: 409  LLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEE 468
            L+S++AG  G+NL   NR+++ D  WNP  D QA  R WR GQKK VF YR ++ GTIEE
Sbjct: 1201 LISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEE 1260

Query: 469  KVYQRQMSKEGL-QKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDN 514
            K+Y+RQ++KEGL  +V+ ++  +        +S E++  LF F D+
Sbjct: 1261 KIYKRQVTKEGLAARVVDRQQVHRT------ISKEEMLHLFEFDDD 1300

[Close]
BLAST of Cucsa.244330 vs. TAIR10
Match: AT1G03750.1 (AT1G03750.1 switch 2)

HSP 1 Score: 147.9 bits (372), Expect = 2.1e-35
Identity = 91/290 (31.38%), Postives = 152/290 (52.41%), Query Frame = 1 

Query: 97  LRPHQREGVQFMFECVSGLHKGTDIFGCILADDMGLGKTLQSISLLYTLLCQGFD-GKPM 156
           L  HQREGV+FM+      H G      IL DDMGLGKT+Q+I+ L  +  +  D G+  
Sbjct: 139 LLEHQREGVKFMYNLYKNNHGG------ILGDDMGLGKTIQTIAFLAAVYGKDGDAGESC 198

Query: 157 VKKA-----IIVTPTSLVSNWEAEIKKWVGERVHLIALCESSREDVVSSIDSFVHPKSSL 216
           + ++     +I+ P+S++ NWE+E  +W       +++   S  D++            +
Sbjct: 199 LLESDKGPVLIICPSSIIHNWESEFSRWAS--FFKVSVYHGSNRDMILE----KLKARGV 258

Query: 217 QVLIISYETFRMHSSKFSQSESCDLLICDEAHRLKNDQTLTNRALAALSCRRRVLLSGTP 276
           +VL+ S++TFR+     S   + +++I DEAHRLKN+++    A   +  ++R+ L+GT 
Sbjct: 259 EVLVTSFDTFRIQGPVLS-GINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTV 318

Query: 277 MQNDLEEFFAMVNFTNPGILGDVSHFRRYYEAPIICGREPIATEEEKKLGAQRSTELSEK 336
           MQN + E F +  +  PG LG   HFR +Y+ P+  G+   A E   ++  +R   L   
Sbjct: 319 MQNKISELFNLFEWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQIADKRKQHLGSL 378

Query: 337 VNQFILRRTNALLSNHL-PPKIVEVICCKLSPLQADLYNHFVQSKNVSSL 380
           + +++LRRT      HL   K   V+ C++S LQ  +Y   +Q   +  L
Sbjct: 379 LRKYMLRRTKEETIGHLMMGKEDNVVFCQMSQLQRRVYQRMIQLPEIQCL 415


HSP 2 Score: 94.0 bits (232), Expect = 3.6e-19
Identity = 42/77 (54.55%), Postives = 59/77 (76.62%), Query Frame = 1 

Query: 407 VFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTI 466
           VFL+S+KAGG GLNL+  NR+V+FDP+WNP++D QA  R +R GQK+ V ++R LS G++
Sbjct: 598 VFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHVVVFRLLSAGSL 657

Query: 467 EEKVYQRQMSKEGLQKV 484
           EE VY RQ+ K+ L  +
Sbjct: 658 EELVYTRQVYKQQLSNI 674

[Close]
BLAST of Cucsa.244330 vs. TAIR10
Match: AT3G54280.2 (AT3G54280.2 DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases)

HSP 1 Score: 140.2 bits (352), Expect = 4.4e-33
Identity = 91/276 (32.97%), Postives = 151/276 (54.71%), Query Frame = 1 

Query: 97   LRPHQREGVQFMFECVSGLHKGTDIFGCILADDMGLGKTLQSISLLYTLLCQ--GFDGKP 156
            LR +Q+EG+ ++     G  K   + G IL DDMGLGKTLQ+ +++ +   +  G   + 
Sbjct: 1482 LRRYQQEGINWL-----GFLKRFKLHG-ILCDDMGLGKTLQASAIVASDAAERRGSTDEL 1541

Query: 157  MVKKAIIVTPTSLVSNWEAEIKKWVGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLI 216
             V  +IIV P++LV +W  EI+K++   +  +     S +D VS  + F    ++  V+I
Sbjct: 1542 DVFPSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQF----NNHNVII 1601

Query: 217  ISYETFRMHSSKFSQSESCDLLICDEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQND 276
             SY+  R      +Q  S +  I DE H +KN ++    A+  L  + R++LSGTP+QN+
Sbjct: 1602 TSYDVVRKDVDYLTQF-SWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNN 1661

Query: 277  LEEFFAMVNFTNPGILGDVSHFRRYYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQF 336
            + E +++ +F  PG LG    F+  Y  P++  R+P  + ++ + G      L ++V  F
Sbjct: 1662 IMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQVMPF 1721

Query: 337  ILRRTNALLSNHLPPKIVEVICCKLSPLQADLYNHF 371
            +LRRT   + + LP KI++   C LSP+Q  LY  F
Sbjct: 1722 LLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQF 1746


HSP 2 Score: 72.4 bits (176), Expect = 1.1e-12
Identity = 48/154 (31.17%), Postives = 76/154 (49.35%), Query Frame = 1 

Query: 359  LSPLQADLYNHFVQSKNVSSLPWE---SRNFRIRELYSVFPSRDVLWKDEFVFLLSSKAG 418
            L  ++ DL+   ++S     L       + F I + ++  P+ DVL       LL++  G
Sbjct: 1874 LDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVL-------LLTTHVG 1933

Query: 419  GCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVYQRQM 478
            G GLNL   + LV  + DWNP  D QA  R  R GQK+ V ++R +  GT+EEKV   Q 
Sbjct: 1934 GLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQK 1993

Query: 479  SKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFS 510
             K  +   +      ++ T    ++++ L DLF+
Sbjct: 1994 FKVSVANTVINAENASMKT----MNTDQLLDLFA 2016

[Close]
BLAST of Cucsa.244330 vs. TAIR10
Match: AT5G63950.1 (AT5G63950.1 chromatin remodeling 24)

HSP 1 Score: 139.4 bits (350), Expect = 7.5e-33
Identity = 111/370 (30.00%), Postives = 180/370 (48.65%), Query Frame = 1 

Query: 30  DEDDEEEQSSSLSPSSDEDLKSKNVDALLSVTLPPGIDPLVLWQPEDSELNVTNLASITV 89
           DEDD+++    LS     ++K  N  A        G D   L       L   NL S T+
Sbjct: 312 DEDDDDDDCLILSGKKAAEMKI-NKPARSYNAKRHGYDERSLEDEGSITLTGLNL-SYTL 371

Query: 90  DPLLVRFLRPHQREGVQFMFECVSGLHKGTDIFGCILADDMGLGKTLQSISLLYTLLCQG 149
              +   L PHQREG+ +++     LH  T   G IL DDMGLGKT+Q  S L  L    
Sbjct: 372 PGKIATMLYPHQREGLNWLWS----LH--TQGKGGILGDDMGLGKTMQICSFLAGL---- 431

Query: 150 FDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGERVHLIALCESSREDVVSSIDS----FVH 209
           F  K ++K+A++V P +L+ +W  E+          + L + +RE   +S  +      H
Sbjct: 432 FHSK-LIKRALVVAPKTLLPHWMKELAT--------VGLSQMTREYYGTSTKAREYDLHH 491

Query: 210 PKSSLQVLIISYETFRMHSSKFSQSE-----------SCDLLICDEAHRLKNDQTLTNRA 269
                 +L+ +Y+  R ++      +             D +I DE H +KN  T   ++
Sbjct: 492 ILQGKGILLTTYDIVRNNTKALQGDDHYTDEDDEDGNKWDYMILDEGHLIKNPNTQRAKS 551

Query: 270 LAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRRYYEAPIICGREPIATE 329
           L  +    R+++SGTP+QN+L+E +A+ NF+ PG+LGD + F++ YE  I+ G +  AT+
Sbjct: 552 LLEIPSSHRIIISGTPIQNNLKELWALFNFSCPGLLGDKNWFKQNYEHYILRGTDKNATD 611

Query: 330 EEKKLGAQRSTELSEKVNQFILRRTNALL------SNHLPPKIVEVICCKLSPLQADLYN 379
            E+++G+  +  L E +  F LRR  + +      ++ L  K   V+  +L+  Q  LY 
Sbjct: 612 REQRIGSTVAKNLREHIQPFFLRRLKSEVFGDDGATSKLSKKDEIVVWLRLTACQRQLYE 660


HSP 2 Score: 94.0 bits (232), Expect = 3.6e-19
Identity = 43/103 (41.75%), Postives = 67/103 (65.05%), Query Frame = 1 

Query: 407 VFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTI 466
           +FLL+S+ GG GL L   +R+++ DP WNP+ D Q+  R +R GQ K V +YR +++ T+
Sbjct: 802 IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATV 861

Query: 467 EEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFS 510
           EEK+Y++Q+ K GL K   +        Q+ + S +DLR+LFS
Sbjct: 862 EEKIYRKQVYKGGLFKTATEHK-----EQIRYFSQQDLRELFS 899

[Close]
BLAST of Cucsa.244330 vs. NCBI nr
Match: gi|449445882|ref|XP_004140701.1| (PREDICTED: protein CHROMATIN REMODELING 25 [Cucumis sativus])

HSP 1 Score: 638.6 bits (1646), Expect = 1.1e-179
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 1 

Query: 59  SVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKG 118
           SVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKG
Sbjct: 143 SVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKG 202

Query: 119 TDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 178
           TDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW
Sbjct: 203 TDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 262

Query: 179 VGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDLLIC 238
           VGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDLLIC
Sbjct: 263 VGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDLLIC 322

Query: 239 DEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRR 298
           DEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRR
Sbjct: 323 DEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRR 382

Query: 299 YYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCK 358
           YYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCK
Sbjct: 383 YYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCK 442

Query: 359 LSPLQADLYNHFVQSKNV 377
           LSPLQADLYNHFVQSKNV
Sbjct: 443 LSPLQADLYNHFVQSKNV 460

[Close]
BLAST of Cucsa.244330 vs. NCBI nr
Match: gi|449445882|ref|XP_004140701.1| (PREDICTED: protein CHROMATIN REMODELING 25 [Cucumis sativus])

HSP 1 Score: 246.5 bits (628), Expect = 1.2e-61
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 1 

Query: 512 DNVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFLLSQHRKPLQSIT 571
           D VTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFLLSQHRKPLQSIT
Sbjct: 807 DEVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFLLSQHRKPLQSIT 866

Query: 572 SNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLPQKRMSDVSECDD 631
           SNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLPQKRMSDVSECDD
Sbjct: 867 SNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLPQKRMSDVSECDD 926

Query: 632 FE 634
           FE
Sbjct: 927 FE 928


HSP 2 Score: 229.2 bits (583), Expect = 2.0e-56
Identity = 113/114 (99.12%), Postives = 113/114 (99.12%), Query Frame = 1 

Query: 401 LWKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF 460
           L KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF
Sbjct: 601 LSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF 660

Query: 461 LSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNV 515
           LSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNV
Sbjct: 661 LSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNV 714


HSP 3 Score: 115.9 bits (289), Expect = 2.5e-22
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1 

Query: 1  MEDEDEIVPASDSSDSSDDYIDINGEAFQDEDDEEEQSSSLSPSSDEDLKSKNVDALL 59
          MEDEDEIVPASDSSDSSDDYIDINGEAFQDEDDEEEQSSSLSPSSDEDLKSKNVDALL
Sbjct: 1  MEDEDEIVPASDSSDSSDDYIDINGEAFQDEDDEEEQSSSLSPSSDEDLKSKNVDALL 58


HSP 4 Score: 628.6 bits (1620), Expect = 1.2e-176
Identity = 313/318 (98.43%), Postives = 314/318 (98.74%), Query Frame = 1 

Query: 59  SVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKG 118
           SVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHK 
Sbjct: 143 SVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKA 202

Query: 119 TDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 178
           TDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW
Sbjct: 203 TDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 262

Query: 179 VGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDLLIC 238
           VGERV LIALCESSREDVVSSID+FVHPKSSLQVLIISYETFRMHSSKF QSESCDLLIC
Sbjct: 263 VGERVQLIALCESSREDVVSSIDNFVHPKSSLQVLIISYETFRMHSSKFGQSESCDLLIC 322

Query: 239 DEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRR 298
           DEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRR
Sbjct: 323 DEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRR 382

Query: 299 YYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCK 358
           YYEAPIICGREPIATEEEKKLGAQRS ELSEKVNQFILRRTNALLSNHLPPKIVEVICCK
Sbjct: 383 YYEAPIICGREPIATEEEKKLGAQRSAELSEKVNQFILRRTNALLSNHLPPKIVEVICCK 442

Query: 359 LSPLQADLYNHFVQSKNV 377
           LSPLQADLYNHFVQSKNV
Sbjct: 443 LSPLQADLYNHFVQSKNV 460

[Close]
BLAST of Cucsa.244330 vs. NCBI nr
Match: gi|659112234|ref|XP_008456127.1| (PREDICTED: DNA repair and recombination protein RAD54 isoform X1 [Cucumis melo])

HSP 1 Score: 230.3 bits (586), Expect = 9.2e-57
Identity = 111/122 (90.98%), Postives = 117/122 (95.90%), Query Frame = 1 

Query: 512 DNVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFLLSQHRKPLQSIT 571
           D VTF+FSNQVDGKLVPVESM+SPR+K+AEGNGNNS LNQN+RQKPFLLSQHRKPLQS+T
Sbjct: 807 DEVTFIFSNQVDGKLVPVESMTSPRVKEAEGNGNNSGLNQNTRQKPFLLSQHRKPLQSVT 866

Query: 572 SNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLPQKRMSDVSECDD 631
           SNEDPNKGTLKFTS VFQ ETMKPVRTSVEGSMHVTLKHKHSLGNYLPQKRMSDVSEC D
Sbjct: 867 SNEDPNKGTLKFTSNVFQRETMKPVRTSVEGSMHVTLKHKHSLGNYLPQKRMSDVSECVD 926

Query: 632 FE 634
           FE
Sbjct: 927 FE 928


HSP 2 Score: 229.2 bits (583), Expect = 2.0e-56
Identity = 113/114 (99.12%), Postives = 113/114 (99.12%), Query Frame = 1 

Query: 401 LWKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF 460
           L KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF
Sbjct: 601 LSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF 660

Query: 461 LSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNV 515
           LSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNV
Sbjct: 661 LSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNV 714


HSP 3 Score: 107.5 bits (267), Expect = 9.0e-20
Identity = 54/58 (93.10%), Postives = 55/58 (94.83%), Query Frame = 1 

Query: 1  MEDEDEIVPASDSSDSSDDYIDINGEAFQDEDDEEEQSSSLSPSSDEDLKSKNVDALL 59
          M DEDEIVPASD SDSSDDYIDINGEAF+DEDDEEEQSSS SPSSDEDLKSKNVDALL
Sbjct: 1  MADEDEIVPASDISDSSDDYIDINGEAFEDEDDEEEQSSSPSPSSDEDLKSKNVDALL 58


HSP 4 Score: 628.6 bits (1620), Expect = 1.2e-176
Identity = 313/318 (98.43%), Postives = 314/318 (98.74%), Query Frame = 1 

Query: 59  SVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKG 118
           SVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHK 
Sbjct: 143 SVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKA 202

Query: 119 TDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 178
           TDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW
Sbjct: 203 TDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 262

Query: 179 VGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDLLIC 238
           VGERV LIALCESSREDVVSSID+FVHPKSSLQVLIISYETFRMHSSKF QSESCDLLIC
Sbjct: 263 VGERVQLIALCESSREDVVSSIDNFVHPKSSLQVLIISYETFRMHSSKFGQSESCDLLIC 322

Query: 239 DEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRR 298
           DEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRR
Sbjct: 323 DEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRR 382

Query: 299 YYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCK 358
           YYEAPIICGREPIATEEEKKLGAQRS ELSEKVNQFILRRTNALLSNHLPPKIVEVICCK
Sbjct: 383 YYEAPIICGREPIATEEEKKLGAQRSAELSEKVNQFILRRTNALLSNHLPPKIVEVICCK 442

Query: 359 LSPLQADLYNHFVQSKNV 377
           LSPLQADLYNHFVQSKNV
Sbjct: 443 LSPLQADLYNHFVQSKNV 460

[Close]
BLAST of Cucsa.244330 vs. NCBI nr
Match: gi|659112236|ref|XP_008456128.1| (PREDICTED: DNA repair and recombination protein RAD54 isoform X2 [Cucumis melo])

HSP 1 Score: 229.2 bits (583), Expect = 2.0e-56
Identity = 113/114 (99.12%), Postives = 113/114 (99.12%), Query Frame = 1 

Query: 401 LWKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF 460
           L KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF
Sbjct: 601 LSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRF 660

Query: 461 LSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNV 515
           LSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNV
Sbjct: 661 LSTGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNV 714


HSP 2 Score: 132.5 bits (332), Expect = 2.6e-27
Identity = 62/70 (88.57%), Postives = 68/70 (97.14%), Query Frame = 1 

Query: 512 DNVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFLLSQHRKPLQSIT 571
           D VTF+FSNQVDGKLVPVESM+SPR+K+AEGNGNNS LNQN+RQKPFLLSQHRKPLQS+T
Sbjct: 807 DEVTFIFSNQVDGKLVPVESMTSPRVKEAEGNGNNSGLNQNTRQKPFLLSQHRKPLQSVT 866

Query: 572 SNEDPNKGTL 582
           SNEDPNKGTL
Sbjct: 867 SNEDPNKGTL 876


HSP 3 Score: 107.5 bits (267), Expect = 9.0e-20
Identity = 54/58 (93.10%), Postives = 55/58 (94.83%), Query Frame = 1 

Query: 1  MEDEDEIVPASDSSDSSDDYIDINGEAFQDEDDEEEQSSSLSPSSDEDLKSKNVDALL 59
          M DEDEIVPASD SDSSDDYIDINGEAF+DEDDEEEQSSS SPSSDEDLKSKNVDALL
Sbjct: 1  MADEDEIVPASDISDSSDDYIDINGEAFEDEDDEEEQSSSPSPSSDEDLKSKNVDALL 58


HSP 4 Score: 563.9 bits (1452), Expect = 3.5e-157
Identity = 271/318 (85.22%), Postives = 295/318 (92.77%), Query Frame = 1 

Query: 59  SVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKG 118
           SVTLPPGIDPLVLWQPE+ E    N+  I VDP+LVRFLRPHQREGVQFMFECVSGL+  
Sbjct: 153 SVTLPPGIDPLVLWQPEEFEDGAANMMQIVVDPVLVRFLRPHQREGVQFMFECVSGLNSA 212

Query: 119 TDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 178
            +I+GCILADDMGLGKTLQSI+LLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW
Sbjct: 213 ANIYGCILADDMGLGKTLQSITLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 272

Query: 179 VGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDLLIC 238
           VGERVHLIALCES+R+DVVS ID F  P+S +QVLIISYETFRMHS+KFSQSESCDLLIC
Sbjct: 273 VGERVHLIALCESTRDDVVSGIDRFTGPRSPIQVLIISYETFRMHSTKFSQSESCDLLIC 332

Query: 239 DEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRR 298
           DEAHRLKNDQT+TN+ALAAL+C+RR+LLSGTPMQNDLEEFFAMVNFTNPGILGD +HFRR
Sbjct: 333 DEAHRLKNDQTMTNQALAALACKRRILLSGTPMQNDLEEFFAMVNFTNPGILGDAAHFRR 392

Query: 299 YYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCK 358
           YYEAPIICGREP A+EEEKKLG +RS ELS KVNQFILRRTNALLSNHLPPKI+EV+CCK
Sbjct: 393 YYEAPIICGREPNASEEEKKLGGERSAELSGKVNQFILRRTNALLSNHLPPKIIEVVCCK 452

Query: 359 LSPLQADLYNHFVQSKNV 377
           L+PLQ DLYNHF+ SKNV
Sbjct: 453 LTPLQLDLYNHFIHSKNV 470

[Close]
BLAST of Cucsa.244330 vs. NCBI nr
Match: gi|645261904|ref|XP_008236517.1| (PREDICTED: DNA repair and recombination protein RAD54 [Prunus mume])

HSP 1 Score: 201.4 bits (511), Expect = 4.6e-48
Identity = 102/143 (71.33%), Postives = 115/143 (80.42%), Query Frame = 1 

Query: 403 KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLS 462
           KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRV+IYRFLS
Sbjct: 613 KDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLS 672

Query: 463 TGTIEEKVYQRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVTFVFSNQV 522
           TGTIEEKVYQRQMSKEGLQKVIQQ     +  Q N LS+EDLRDLF+FH+NV      ++
Sbjct: 673 TGTIEEKVYQRQMSKEGLQKVIQQXXXXLILLQGNLLSTEDLRDLFTFHENVRSEVHEKM 732

Query: 523 DGKLVPVESMSSPRMKDAEGNGN 546
           +   +  ++ +      AEG+ N
Sbjct: 733 N--CIRCQNSNDTHRSIAEGDAN 753


HSP 2 Score: 110.9 bits (276), Expect = 8.1e-21
Identity = 60/123 (48.78%), Postives = 83/123 (67.48%), Query Frame = 1 

Query: 512 DNVTFVFSNQVDGKLVPVESMSSPRMKDAEGNGNNSRLNQNSRQKPFLLSQHRKPLQSIT 571
           + VTFVF+NQVDGKLVPVES  +P+M+  EG  N+ +L Q+  QKP LLS  RKPL+S++
Sbjct: 820 EEVTFVFTNQVDGKLVPVESKVNPKMQGEEGKENHPKLRQDLNQKPLLLSWQRKPLESVS 879

Query: 572 SNEDPNKGTLKFTSTVFQSETMKPVRTSVEGSMHVTLKHKHSLGNYLPQKRMS--DVSEC 631
           S+E+  + T+       +  T++ V+TS++GS+HV LK K SL   LP KR S   V+  
Sbjct: 880 SSENSTRSTMSAPFKPSEKTTVESVKTSLKGSVHVALKPKLSLKIRLPLKRSSPETVNHD 939

Query: 632 DDF 633
           DDF
Sbjct: 940 DDF 942


HSP 3 Score: 562.4 bits (1448), Expect = 1.0e-156
Identity = 270/318 (84.91%), Postives = 295/318 (92.77%), Query Frame = 1 

Query: 59  SVTLPPGIDPLVLWQPEDSELNVTNLASITVDPLLVRFLRPHQREGVQFMFECVSGLHKG 118
           SVTLPPGIDPLVLWQPE+ E    N+  I VDP+LVRFLRPHQREGVQFMFECVSGL+  
Sbjct: 153 SVTLPPGIDPLVLWQPEEFEDGTANMMQIVVDPVLVRFLRPHQREGVQFMFECVSGLNSA 212

Query: 119 TDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 178
            +I+GCILADDMGLGKTLQSI+LLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW
Sbjct: 213 ANIYGCILADDMGLGKTLQSITLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKW 272

Query: 179 VGERVHLIALCESSREDVVSSIDSFVHPKSSLQVLIISYETFRMHSSKFSQSESCDLLIC 238
           VGERVHLIALCES+R+DVVS ID F  P+S +QVLIISYETFRMHS+KFSQSESCDLLIC
Sbjct: 273 VGERVHLIALCESTRDDVVSGIDRFTGPRSPIQVLIISYETFRMHSTKFSQSESCDLLIC 332

Query: 239 DEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGILGDVSHFRR 298
           DEAHRLKNDQT+TN+ALAAL+C+RR+LLSGTPMQNDLEEFFAMVNFTNPGILG+ +HFRR
Sbjct: 333 DEAHRLKNDQTMTNQALAALACKRRILLSGTPMQNDLEEFFAMVNFTNPGILGEAAHFRR 392

Query: 299 YYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPKIVEVICCK 358
           YYEAPIICGREP A+EEEKKLG +RS ELS KVNQFILRRTNALLSNHLPPKI+EV+CCK
Sbjct: 393 YYEAPIICGREPNASEEEKKLGGERSAELSGKVNQFILRRTNALLSNHLPPKIIEVVCCK 452

Query: 359 LSPLQADLYNHFVQSKNV 377
           L+PLQ DLYNHF+ SKNV
Sbjct: 453 LTPLQLDLYNHFIHSKNV 470

The following BLAST results are available for this feature:
BLAST of Cucsa.244330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHR25_ARATH6.6e-14880.44Protein CHROMATIN REMODELING 25 OS=Arabidopsis thaliana GN=CHR25 PE=1 SV=1[more]
RAD54_ORYSJ9.2e-14273.21DNA repair and recombination protein RAD54 OS=Oryza sativa subsp. japonica GN=RA... [more]
RAD54_HUMAN7.5e-7545.57DNA repair and recombination protein RAD54-like OS=Homo sapiens GN=RAD54L PE=1 S... [more]
RAD54_DROWI4.8e-7445.68DNA repair and recombination protein RAD54-like OS=Drosophila willistoni GN=okr ... [more]
RAD54_CHICK6.3e-7448.15DNA repair and recombination protein RAD54-like (Fragment) OS=Gallus gallus GN=R... [more]
BLAST of Cucsa.244330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9A1_CUCSA7.8e-180100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207350 PE=4 SV=1[more]
A0A0A0L9A1_CUCSA8.6e-6299.18Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207350 PE=4 SV=1[more]
M5W573_PRUPE3.3e-2953.85Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024484mg PE=4 SV=1[more]
U5GLI1_POPTR7.1e-4885.71Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s14870g PE=4 SV=1[more]
V4S769_9ROSI6.8e-5191.07Uncharacterized protein OS=Citrus clementina GN=CICLE_v10027772mg PE=4 SV=1[more]
BLAST of Cucsa.244330 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19210.13.7e-14980.44 homolog of RAD54[more]
AT1G08600.31.5e-4135.69 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
AT1G03750.12.1e-3531.38 switch 2[more]
AT3G54280.24.4e-3332.97 DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP b... [more]
AT5G63950.17.5e-3330.00 chromatin remodeling 24[more]
BLAST of Cucsa.244330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445882|ref|XP_004140701.1|1.1e-179100.00PREDICTED: protein CHROMATIN REMODELING 25 [Cucumis sativus][more]
gi|449445882|ref|XP_004140701.1|1.2e-6199.18PREDICTED: protein CHROMATIN REMODELING 25 [Cucumis sativus][more]
gi|659112234|ref|XP_008456127.1|9.2e-5790.98PREDICTED: DNA repair and recombination protein RAD54 isoform X1 [Cucumis melo][more]
gi|659112236|ref|XP_008456128.1|2.0e-5699.12PREDICTED: DNA repair and recombination protein RAD54 isoform X2 [Cucumis melo][more]
gi|645261904|ref|XP_008236517.1|4.6e-4871.33PREDICTED: DNA repair and recombination protein RAD54 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045003 double-strand break repair via synthesis-dependent strand annealing
biological_process GO:0051701 interaction with host
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0016740 transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.244330.1Cucsa.244330.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 116..374
score: 2.7
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 403..449
score: 3.
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 375..450
score: 2.
IPR001650Helicase, C-terminalPROFILEPS51194HELICASE_CTERcoord: 330..500
score: 11
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 93..296
score: 1.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROFILEPS51192HELICASE_ATP_BIND_1coord: 123..288
score: 2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 97..285
score: 3.7E-24coord: 404..473
score: 2.
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 348..511
score: 1.23E-35coord: 232..291
score: 1.23E-35coord: 66..338
score: 2.03
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 212..480
score: 4.0E-117coord: 84..195
score: 4.0E-117coord: 584..589
score: 4.0E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.244330Cla013068Watermelon (97103) v1cgywmB462
Cucsa.244330Csa3G207350Cucumber (Chinese Long) v2cgycuB350
Cucsa.244330MELO3C019510Melon (DHL92) v3.5.1cgymeB417
Cucsa.244330ClCG05G010010Watermelon (Charleston Gray)cgywcgB433
Cucsa.244330CSPI03G18500Wild cucumber (PI 183967)cgycpiB366
Cucsa.244330CmoCh04G005270Cucurbita moschata (Rifu)cgycmoB0687
Cucsa.244330Lsi05G002110Bottle gourd (USVL1VR-Ls)cgylsiB404
Cucsa.244330MELO3C019510.2Melon (DHL92) v3.6.1cgymedB412
Cucsa.244330CsaV3_3G018560Cucumber (Chinese Long) v3cgycucB369
Cucsa.244330Cla97C05G092420Watermelon (97103) v2cgywmbB435
Cucsa.244330Bhi01G001257Wax gourdcgywgoB493
Cucsa.244330Carg08161Silver-seed gourdcarcgyB0436
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.244330Cucumber (Chinese Long) v3cgycucB370
Cucsa.244330Watermelon (97103) v2cgywmbB434
Cucsa.244330Cucumber (Gy14) v1cgycgyB117
Cucsa.244330Cucurbita maxima (Rimu)cgycmaB0684
Cucsa.244330Cucurbita maxima (Rimu)cgycmaB0685
Cucsa.244330Cucurbita maxima (Rimu)cgycmaB0686
Cucsa.244330Cucurbita maxima (Rimu)cgycmaB0687
Cucsa.244330Cucurbita moschata (Rifu)cgycmoB0684
Cucsa.244330Cucurbita moschata (Rifu)cgycmoB0685
Cucsa.244330Cucurbita moschata (Rifu)cgycmoB0686
Cucsa.244330Wild cucumber (PI 183967)cgycpiB367
Cucsa.244330Cucumber (Chinese Long) v2cgycuB351
Cucsa.244330Melon (DHL92) v3.5.1cgymeB416
Cucsa.244330Watermelon (Charleston Gray)cgywcgB432
Cucsa.244330Watermelon (97103) v1cgywmB463
Cucsa.244330Cucurbita pepo (Zucchini)cgycpeB0652
Cucsa.244330Cucurbita pepo (Zucchini)cgycpeB0653
Cucsa.244330Cucurbita pepo (Zucchini)cgycpeB0654
Cucsa.244330Bottle gourd (USVL1VR-Ls)cgylsiB403
Cucsa.244330Melon (DHL92) v3.6.1cgymedB411
Cucsa.244330Silver-seed gourdcarcgyB0253
Cucsa.244330Silver-seed gourdcarcgyB0734