Cucsa.244320 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCgCCATTAATCCTtCTtCcTTTTtCTtCCcTTCCAATCCCACCACTGCAACTGCACGTCAACATTCCATCTCTCCCCCcTCCTCCTTCCGTCTTTCCCTTGCCGCTACCGGAGACGCCTCCCCTGACCCCTCAATTTCCCGCCTCTTCAATTTCCCTTCTCTTTCTGCCACCGACGCTACCGGCGGCTTTCGTCTTGGACAAGACTACGATGCCGGAGCTTCCTCCCCcGTTATCGATGGACCGGGGAGGTTCGCCAGAGGAAATGGCACCGTCAAAGTGAACGCCATGGAGAAAAAATGGTCTCGTGATAGAGAGAGTTATTTAGTCGATGATAGCGATGTTCTCCCTCTTCCTATGACTTACCCGGATTCTTCCCCTGTATCGCCGGATGAGATCGACCGTCGGCTTCGGTGCGATCCACAAGTGGAGGTCTGTTATTCATCTGATAACTTTGATTCATAGTATCATCTTTTGCTTTTGACAGTTTTACTTTTTCCTATTTGTGAAAAGCGATTTATCGTGATTTTTCTGCCTAGTTGTGCCCTAACTCCCGTGCTCTTGATTTATTTGAGGAGGCTATTTCGTATTGATTTCTAAAATAACTTTCTAGATTGATTCAAATCATTTGGAAACTGGAATTTTGTTGGTAACAGTTCAAGCATTGATGTAACCAACAAGCATTAGCATGCTTTAGCTGAGGTGTATCACCTCAATTTTAGGCTGCGTTGGTGGGATTTAAGCTATTTTCCCAACCTCACAGTTATCTCCATTTTCGGAGTTTTAGAGTTTAAGCCATTGTTGTAAATTGTAGGATTGTAAAGAAGTGGTGTATGAATGGACCGGGAAGTGTCGCAGTTGCCAAGGGTCTGGATATGTTAGCTATTATAACAAAAGGGGAAGAGAGATCACTTGCAAATGTATACCTTGCCTTGGAATTGGTATTCTTCTTCTTCTTCCTTCCTCCTTTCCATCTTTCCTATGGGAACCAACACATAGTGCAAATTGTAGGGTATTGCAATGTTATGTTATAAGGGTTTTACTGACAAGTGACAACCTTCATATATCATGAAAATATAATAACACTCATGCTAATATTCTGACTGAGTTCAACCTCATGCGGAGCGGAGGATTTGATCCCTTTACCTCATGATTGAGGGAGGTTATATGTTTGAATTAGTTATCATGATTGAGTGAGGTTATATGTTTGAGTTAGTTGAGTTATGTTCAGGTTGTTGATGCTACTCATAGTTCTTGCTTGCAATCTTCATTGATGCGCTTTAGACAGTGACAGATATGAGCGTTAGGAGCCAAAGGGAATTACCCAAGAATTTCTGATCATAATTGAAGTTCTTTTAAAGAATGGACAATAATCCTTGCTTTTTATCTTCACATTTGATAAATTGGTTCCTTCGTTACTCTGCTTTCTGTCAGATTAAGGACTTTGATCATTGTGGTTTTGAATGTATCTCAAGACATATGCCAACTAGAGGCTCTCTTACACTAACAATTGGCCCCATTTGGTAACTGTATTGTTTTTtATTTTtGGTTTTTGAAAaTTAAGCCTATAGACACTACTTCTACCTCTAAGTTTCTTCATTTGTATCTAAGTCTAAAAAAGTAAACCAAAATTTGAAAACTAAAAAGAGTAGCTTTTAAAAACTTGTTTTtGTTTTTGGAATTTGGTTAAGAATTCAACCATGCATATCATAGTAAGAAATGAAGAAAAAATATGCTTAATTTTTAAAAACCAAAAACACAAAACGAGATGGTTACCAAATGGAGTGGAAAATATTCATGCATTCTGCGGCAGGAGAAAAAAAACATTTGCCTAACTGAAGTTAAATAAATTGATATTTTCAACAAATCTTCATTGTTTGCTGATCCTTTGTCTGCATTTCAACGTTTCTTCTCCCTTTGTATAAAGAGAATTTCTCCAAGCTTTTGTTGCAACCAACATTTTGACAAAACTGTGATGTAACTTTTGAGACCATGTTGGTTGTTTTtCCATATCAAAATCTCAGTTCAAATTTGCCTCTTCTTCTTGTTTGCAATCCTGCAGGGTATGTTCAGAAGATAACGGCTCGAAAGGACATTGAACTAATGGAGGATTTGGATAATAACGGAAAGCCATTGTGATTCAATGCCTGTTTTGAAAATCTACACATCTCTATCTAACTTCACCTTTGAGGGGCTGTAATTTTTCACGCAGAAGTTATTTAGATTAGGTTTTGTATTGATGATAGGCAAAATAAACACATGGAGAGAATATTGAACACAGTGGCGAAATAAAAGTAATGCTCATTTGGTAGTGAGTTGTAGCTTCAGCTTCCTTCTTGACTATCTCTTGGATTGTCATAATGCCCTATTACATCTACTGTTAGTATTAC ATGTTCGCCATTAATCCTTCTTCCTTTTTCTTCCCTTCCAATCCCACCACTGCAACTGCACGTCAACATTCCATCTCTCCCCCCTCCTCCTTCCGTCTTTCCCTTGCCGCTACCGGAGACGCCTCCCCTGACCCCTCAATTTCCCGCCTCTTCAATTTCCCTTCTCTTTCTGCCACCGACGCTACCGGCGGCTTTCGTCTTGGACAAGACTACGATGCCGGAGCTTCCTCCCCCGTTATCGATGGACCGGGGAGGTTCGCCAGAGGAAATGGCACCGTCAAAGTGAACGCCATGGAGAAAAAATGGTCTCGTGATAGAGAGAGTTATTTAGTCGATGATAGCGATGTTCTCCCTCTTCCTATGACTTACCCGGATTCTTCCCCTGTATCGCCGGATGAGATCGACCGTCGGCTTCGGTGCGATCCACAAGTGGAGGATTGTAAAGAAGTGGTGTATGAATGGACCGGGAAGTGTCGCAGTTGCCAAGGGTCTGGATATGTTAGCTATTATAACAAAAGGGGAAGAGAGATCACTTGCAAATGTATACCTTGCCTTGGAATTGGGTATGTTCAGAAGATAACGGCTCGAAAGGACATTGAACTAATGGAGGATTTGGATAATAACGGAAAGCCATTGTGATTCAATGCCTGTTTTGAAAATCTACACATCTCTATCTAACTTCACCTTTGAGGGGCTGTAATTTTTCACGCAGAAGTTATTTAGATTAGGTTTTGTATTGATGATAGGCAAAATAAACACATGGAGAGAATATTGAACACAGTGGCGAAATAAAAGTAATGCTCATTTGGTAGTGAGTTGTAGCTTCAGCTTCCTTCTTGACTATCTCTTGGATTGTCATAATGCCCTATTACATCTACTGTTAGTATTAC ATGTTCgCCATTAATCCTtCTtCcTTTTtCTtCCcTTCCAATCCCACCACTGCAACTGCACGTCAACATTCCATCTCTCCCCCcTCCTCCTTCCGTCTTTCCCTTGCCGCTACCGGAGACGCCTCCCCTGACCCCTCAATTTCCCGCCTCTTCAATTTCCCTTCTCTTTCTGCCACCGACGCTACCGGCGGCTTTCGTCTTGGACAAGACTACGATGCCGGAGCTTCCTCCCCcGTTATCGATGGACCGGGGAGGTTCGCCAGAGGAAATGGCACCGTCAAAGTGAACGCCATGGAGAAAAAATGGTCTCGTGATAGAGAGAGTTATTTAGTCGATGATAGCGATGTTCTCCCTCTTCCTATGACTTACCCGGATTCTTCCCCTGTATCGCCGGATGAGATCGACCGTCGGCTTCGGTGCGATCCACAAGTGGAGGATTGTAAAGAAGTGGTGTATGAATGGACCGGGAAGTGTCGCAGTTGCCAAGGGTCTGGATATGTTAGCTATTATAACAAAAGGGGAAGAGAGATCACTTGCAAATGTATACCTTGCCTTGGAATTGGGTATGTTCAGAAGATAACGGCTCGAAAGGACATTGAACTAATGGAGGATTTGGATAATAACGGAAAGCCATTGTGA MFAINPSSFFFPSNPTTATARQHSISPPSSFRLSLAATGDASPDPSISRLFNFPSLSATDATGGFRLGQDYDAGASSPVIDGPGRFARGNGTVKVNAMEKKWSRDRESYLVDDSDVLPLPMTYPDSSPVSPDEIDRRLRCDPQVEDCKEVVYEWTGKCRSCQGSGYVSYYNKRGREITCKCIPCLGIGYVQKITARKDIELMEDLDNNGKPL*
BLAST of Cucsa.244320 vs. Swiss-Prot
Match: SCO2_ARATH (Protein disulfide-isomerase SCO2 OS=Arabidopsis thaliana GN=SCO2 PE=1 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 6.2e-50 Identity = 96/145 (66.21%), Postives = 109/145 (75.17%), Query Frame = 1
BLAST of Cucsa.244320 vs. TrEMBL
Match: A0A0A0L6G9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G207360 PE=4 SV=1) HSP 1 Score: 439.5 bits (1129), Expect = 2.3e-120 Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 1
BLAST of Cucsa.244320 vs. TrEMBL
Match: B9RYI8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0813630 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 8.7e-67 Identity = 136/222 (61.26%), Postives = 161/222 (72.52%), Query Frame = 1
BLAST of Cucsa.244320 vs. TrEMBL
Match: A0A067LE01_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01623 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 7.4e-66 Identity = 137/222 (61.71%), Postives = 160/222 (72.07%), Query Frame = 1
BLAST of Cucsa.244320 vs. TrEMBL
Match: D7TPJ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00520 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 1.7e-62 Identity = 129/217 (59.45%), Postives = 147/217 (67.74%), Query Frame = 1
BLAST of Cucsa.244320 vs. TrEMBL
Match: B9HS05_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s10520g PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 2.9e-62 Identity = 129/215 (60.00%), Postives = 151/215 (70.23%), Query Frame = 1
BLAST of Cucsa.244320 vs. TAIR10
Match: AT3G19220.1 (AT3G19220.1 protein disulfide isomerases) HSP 1 Score: 198.7 bits (504), Expect = 3.5e-51 Identity = 96/145 (66.21%), Postives = 109/145 (75.17%), Query Frame = 1
BLAST of Cucsa.244320 vs. NCBI nr
Match: gi|778680082|ref|XP_004140700.2| (PREDICTED: protein disulfide-isomerase SCO2 [Cucumis sativus]) HSP 1 Score: 439.5 bits (1129), Expect = 3.3e-120 Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 1
BLAST of Cucsa.244320 vs. NCBI nr
Match: gi|659112230|ref|XP_008456126.1| (PREDICTED: protein disulfide-isomerase SCO2 [Cucumis melo]) HSP 1 Score: 404.8 bits (1039), Expect = 9.1e-110 Identity = 196/212 (92.45%), Postives = 200/212 (94.34%), Query Frame = 1
BLAST of Cucsa.244320 vs. NCBI nr
Match: gi|1009150198|ref|XP_015892891.1| (PREDICTED: protein disulfide-isomerase SCO2 [Ziziphus jujuba]) HSP 1 Score: 269.2 bits (687), Expect = 6.0e-69 Identity = 137/216 (63.43%), Postives = 155/216 (71.76%), Query Frame = 1
BLAST of Cucsa.244320 vs. NCBI nr
Match: gi|255555471|ref|XP_002518772.1| (PREDICTED: protein disulfide-isomerase SCO2 [Ricinus communis]) HSP 1 Score: 261.5 bits (667), Expect = 1.2e-66 Identity = 136/222 (61.26%), Postives = 161/222 (72.52%), Query Frame = 1
BLAST of Cucsa.244320 vs. NCBI nr
Match: gi|702392382|ref|XP_010066023.1| (PREDICTED: protein disulfide-isomerase SCO2 [Eucalyptus grandis]) HSP 1 Score: 260.8 bits (665), Expect = 2.1e-66 Identity = 135/214 (63.08%), Postives = 153/214 (71.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |