Cucsa.240900 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.240900
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Mutator-like transposase
Location	scaffold02047 : 1090221 .. 1091836 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTATTAAGGACTTGATAAAGAACAAAATAAGTTTAGCTGGTTCAGAATTGTCCACTCCTAAAGATATAGTTCATTATGTTCGTGTTGAACATGACTTAAGCATATCTTACCAAAAAGCATGGCGTGCACGTGAGGCTGCGTTGGATGAGACTAGAGGTTCTTCGAAGGATTCCTACAAGATGGTCGCCAAATTTGCATACATGTTGAATCTTAACAATCCAGGTATATTAATAATATACCTAACGGCCTATGTAATATATTTGTCATTAACAGATTGTTGTTCTTTAATGTCAATATTTGTTATGTTAATAGGTTCTATTGTTGAATACCGACTTGATGTGGATGGTAGATTTCTATATTTCTTCATGGCATTATATGCCTCTATTGCTGCTTGGCAACATTGTCGTCCAGTCATATCTATTGATGAAACAAGCATGAAGAATAAGTATGTGGTACTCTTTTAACTGCTTCAAGTCCTGATGCCAACGATCAAATTTTACCACTAGTATTTTGTGTTATCGATTCTGAAAATGATGCCTCTTGGACGTGGTTTTGCAATCAACTGAAGCGAATCATTGGTTGTAGGAATGACATTGTGATAGTATCTTACCGACATAAAAGTATATGCAAAGCGATAGAGGTAGTATTTCCCAACGTTCTGCATTGCATGTGTATGGTTCATTTACTTAGGAACTTGAAATTGAAGTATAGATCAATAGTCAATACCATGTTCCATGCATGTGGCAAGACTTACAATGTTGTTGATTTTGAACAAGAAATGCGTTTGTTGGAATCTAATGCACCTGGTATACGTGAGGAGTTACAATCAATTGGATTTTTAAGGTGGTCCCGTGCCTACTTACTCCTTAGTAGATATAATGTCATGACTACCAACATATCTGAGAGTTTGAATAATGCAATTATCAAGGCTAGGGAGTTGCCCATATGTTCAATGCTTGAGGTATTGAGAATGATATTGAATAGGTGGTGTTTTGAACGTAGAAATGAAACAGCCTATCAAGTTACAGATTTTACAAAAACTGTTGAAGGTATTATAAGGGAACGAATTGAAAATAGTCGATCTATATAATAGGTATATTTAACTTATAATCTAAATTGAATGTTAATAGATACATCTTATTATCTAATATATACCTAATTATCTTCTACATGTAATTATCTATGTAGGTCAATCCAGTCAACAATATGAAATACCAGGTCATCCATGGCACATCTCAATATGTTGTGTACTTGCCTTCGAAGATTTGTACTTGTAGGATGTTGGATATATTGCAAATACCTTGTGCCCATACATGTGTTGTTCTTACCATGAAGCATTTGTCAATAAAACCATTTGTTTCACATTATTATTTGAACAACACACTAAGTTCAATTTATAGAGAATTAATAAACCCTTTAGGTGATCATCGACAATTACCTGATGATGTTTTATCCATTGACATTCTGCCACCTAATGTAAAACGTCCCGTTGGTAGACCCAAGAAGATTAGAACCTCTTCTAAAAATGAAGTTCAAGAGATGGATAAAATGTGGGCGTTGTGAGCGTTATGGGCATAACAGAAAGCGATGCAAGTTTTCCTTATCTAGTTAG

mRNA sequence

atggttattaaggacttgataaagaacaaaataagtttagctggttcagaattgtccactcctaaagatatagttcattatgttcgtgttgaacatgacttaagcatatcttaccaaaaagcatggcgtgcacgtgaggctgcgttggatgagactagaggttcttcgaaggattcctacaagatggtcgccaaatttgcatacatgttgaatcttaacaatccaggttctattgttgaataccgacttgatgtggatggtagatttctatatttcttcatggcattatatgcctctattgctgcttggcaacattgtcgtccagtcatatctattgatgaaacaagcatgaagaataatcctgatgccaacgatcaaattttaccactagtattttgtgttatcgattctgaaaatgatgcctcttggacgtggttttgcaatcaactgaagcgaatcattggttgtaggaatgacattgtgatagtatcttaccgacataaaagtatatgcaaagcgatagaggtagtatttcccaacgttctgcattgcatgtgtatggttcatttacttaggaacttgaaattgaagtatagatcaatagtcaataccatgttccatgcatgtggcaagacttacaatgttgttgattttgaacaagaaatgcgtttgttggaatctaatgcacctggtatacgtgaggagttacaatcaattggatttttaaggtggtcccgtgcctacttactccttagtagatataatgtcatgactaccaacatatctgagagtttgaataatgcaattatcaaggctagggagttgcccatatgttcaatgcttgaggtcaatccagtcaacaatatgaaataccaggtcatccatggcacatctcaatatgttgtgtacttgccttcgaagatttgtacttgtaggatgttggatatattgcaaataccttgtgcccatacatgtgttgttcttaccatgaagcatttgtcaataaaaccatttgtttcacattattatttgaacaacacactaagttcaatttatagagaattaataaaccctttaggtgatcatcgacaattacctgatgatgttttatccattgacattctgccacctaatcgttatgggcataacagaaagcgatgcaagttttccttatctagttag

Coding sequence (CDS)

ATGGTTATTAAGGACTTGATAAAGAACAAAATAAGTTTAGCTGGTTCAGAATTGTCCACTCCTAAAGATATAGTTCATTATGTTCGTGTTGAACATGACTTAAGCATATCTTACCAAAAAGCATGGCGTGCACGTGAGGCTGCGTTGGATGAGACTAGAGGTTCTTCGAAGGATTCCTACAAGATGGTCGCCAAATTTGCATACATGTTGAATCTTAACAATCCAGGTTCTATTGTTGAATACCGACTTGATGTGGATGGTAGATTTCTATATTTCTTCATGGCATTATATGCCTCTATTGCTGCTTGGCAACATTGTCGTCCAGTCATATCTATTGATGAAACAAGCATGAAGAATAATCCTGATGCCAACGATCAAATTTTACCACTAGTATTTTGTGTTATCGATTCTGAAAATGATGCCTCTTGGACGTGGTTTTGCAATCAACTGAAGCGAATCATTGGTTGTAGGAATGACATTGTGATAGTATCTTACCGACATAAAAGTATATGCAAAGCGATAGAGGTAGTATTTCCCAACGTTCTGCATTGCATGTGTATGGTTCATTTACTTAGGAACTTGAAATTGAAGTATAGATCAATAGTCAATACCATGTTCCATGCATGTGGCAAGACTTACAATGTTGTTGATTTTGAACAAGAAATGCGTTTGTTGGAATCTAATGCACCTGGTATACGTGAGGAGTTACAATCAATTGGATTTTTAAGGTGGTCCCGTGCCTACTTACTCCTTAGTAGATATAATGTCATGACTACCAACATATCTGAGAGTTTGAATAATGCAATTATCAAGGCTAGGGAGTTGCCCATATGTTCAATGCTTGAGGTCAATCCAGTCAACAATATGAAATACCAGGTCATCCATGGCACATCTCAATATGTTGTGTACTTGCCTTCGAAGATTTGTACTTGTAGGATGTTGGATATATTGCAAATACCTTGTGCCCATACATGTGTTGTTCTTACCATGAAGCATTTGTCAATAAAACCATTTGTTTCACATTATTATTTGAACAACACACTAAGTTCAATTTATAGAGAATTAATAAACCCTTTAGGTGATCATCGACAATTACCTGATGATGTTTTATCCATTGACATTCTGCCACCTAATCGTTATGGGCATAACAGAAAGCGATGCAAGTTTTCCTTATCTAGTTAG

Protein sequence

MVIKDLIKNKISLAGSELSTPKDIVHYVRVEHDLSISYQKAWRAREAALDETRGSSKDSYKMVAKFAYMLNLNNPGSIVEYRLDVDGRFLYFFMALYASIAAWQHCRPVISIDETSMKNNPDANDQILPLVFCVIDSENDASWTWFCNQLKRIIGCRNDIVIVSYRHKSICKAIEVVFPNVLHCMCMVHLLRNLKLKYRSIVNTMFHACGKTYNVVDFEQEMRLLESNAPGIREELQSIGFLRWSRAYLLLSRYNVMTTNISESLNNAIIKARELPICSMLEVNPVNNMKYQVIHGTSQYVVYLPSKICTCRMLDILQIPCAHTCVVLTMKHLSIKPFVSHYYLNNTLSSIYRELINPLGDHRQLPDDVLSIDILPPNRYGHNRKRCKFSLSS*

Homology

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BLAST of Cucsa.240900 vs. TrEMBL
Match: A5B699_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042737 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 4.7e-58
Identity = 153/446 (34.30%), Postives = 214/446 (47.98%), Query Frame = 1


Query: 2   VIKDLIKNKISLAGSELSTPKDIVHYVRVEHDLSISYQKAWRAREAALDETRGSSKDSYK 61
           +I + I+      G E   PKDIV  +R ++ + ISY KAWRA+E AL   RGS ++SYK
Sbjct: 132 LIGESIRETYQGVGCEFQ-PKDIVADIRKQYGIQISYDKAWRAKELALGSIRGSPEESYK 191

Query: 62  MVAKFAYMLNLNNPGSIVEYRLDVDGRFLYFFMALYASIAAWQ-HCRPVISIDETSMKNN 121
            +  + Y+L    PG+I +   D D +F YFFM++ AS+A +    RPV++ID T +K  
Sbjct: 192 TLPSYCYILEQKIPGTITDIVTDSDNQFKYFFMSIGASLAGFHTSIRPVVAIDRTFLKAK 251

Query: 122 ----------PDANDQILPLVFCVIDSENDASWTWFCNQLKRIIGCRNDIVIVSYRHKSI 181
                      D N+QI PL F + DSENDASW WF  +L   +G  +D+ ++SYRH SI
Sbjct: 252 YLGTLFIAPCKDGNNQIYPLAFGIGDSENDASWEWFLQKLHDALGHIDDLFVISYRHGSI 311

Query: 182 CKAIEVVFPNVLHCMCMVHLLRNLKLKYRSIVNTMFHACGKTYNVVDFEQEMRLLESNAP 241
            KA+  VFP+  H +   H+ +NLK K    VN +F                  LE   P
Sbjct: 312 EKAVHKVFPHARHGVYTYHVGQNLKTK----VNFIFGQ----------------LEMIDP 371

Query: 242 GIREELQSIGFLRWSRAYLLLSRYNVMTTNISESLNNAIIKARELPICSMLE-------- 301
                L  IG  RW+R+Y    RYN+MTT I ESLN  +  AR+LP+  ++E        
Sbjct: 372 RAARYLMDIGIDRWARSYSTGKRYNIMTTGIVESLNAVLKNARDLPVLQLVEELRNLLQK 431

Query: 302 ---------VNPVNNMKYQVIHGTSQYVVYLPSKICTCRMLDILQIPCAHTCVVLTMKHL 361
                    V P+N+ +  V +      V L ++ CTCR  D+  IPCAH        ++
Sbjct: 432 WYNMSATYLVEPINSKECNVNYVGISAQVNLDTRSCTCRQFDLDHIPCAHAIAACRFYNI 491

Query: 362 SIKPFVSHYYLNNTLSSIYRELINPLGDHRQ--LPDDVLSIDILPP-------------- 389
           S     S Y+    L S Y E I P G+     +P+ +    +LPP              
Sbjct: 492 SCYTLCSKYFTTKALLSSYSECIYPNGNEIDWVVPNHIRDKVVLPPKTRRPTGRPRKVRI 551

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BLAST of Cucsa.240900 vs. TrEMBL
Match: K4BII7_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 4.7e-58
Identity = 138/418 (33.01%), Postives = 213/418 (50.96%), Query Frame = 1


Query: 20  TPKDIVHYVRVEHDLSISYQKAWRAREAALDETRGSSKDSYKMVAKFAYMLNLNNPGSIV 79
           TPKDI H +  E+ + ++Y +AWRA+EAAL+  RG    SY  +  + ++L    PGS +
Sbjct: 277 TPKDIQHDMLAEYGVRLTYMQAWRAKEAALELIRGDPIQSYAKLPSYFHILEATYPGSHI 336

Query: 80  EYRLDVDGRFLYFFMALYASIAAWQHCRPVISIDETSMK----------NNPDANDQILP 139
            +    D RFLY F+AL+ SI  W++CRP++ +D T +K          N  DA   ILP
Sbjct: 337 RFHKSEDDRFLYAFVALFTSIKGWEYCRPIVVVDGTFLKGAYKGTLLTANTLDAAGSILP 396

Query: 140 LVFCVIDSENDASWTWFCNQLKRIIGCRNDIVIVSYRHKSICKAIEVVFPNVLHCMCMVH 199
           L + ++DSEND+SW WF  Q +   G R ++ IVS RH SI KA+  V+  V H  CM H
Sbjct: 397 LAYAIVDSENDSSWGWFFEQFRDAFGQRPEMCIVSDRHASIIKAVSTVYDEVPHFACMWH 456

Query: 200 LLRNLKLKYR---SIVNTMFHACGKTYNVVDFEQEMRLLESNAPGIREELQSIGFLRWSR 259
           LL+N+   +R     V  +F++  KTY + +F Q M ++E     I++ L +IG+ +WSR
Sbjct: 457 LLQNIMKNFRRSQQRVTELFYSMAKTYTMTEFNQCMTMVEKIDKRIKDYLLNIGYNKWSR 516

Query: 260 AYLLLSRYNVMTTNISESLNNAIIKARELPICSMLEV----------------------- 319
            +  ++R  +MT+NI+ES+N+    A+ L +  +LE                        
Sbjct: 517 VHAEVNRTWMMTSNIAESVNSRTRHAKVLTVLQLLEFMRQLVQKWNNNNRSKATFSGFHL 576

Query: 320 ----------NPVNNMKYQVIHGTSQYVVYLPSKI-----------CTCRMLDILQIPCA 379
                     N   + K +V+  T++YV  +   I           CTC    + ++PC 
Sbjct: 577 GKKYENILRRNKTASEKLKVVE-TNKYVYTVLDGITQFTVCLHQRTCTCGRFQLDELPCP 636

[Close]

BLAST of Cucsa.240900 vs. TrEMBL
Match: K4CJF3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 4.0e-57
Identity = 137/418 (32.78%), Postives = 212/418 (50.72%), Query Frame = 1


Query: 20  TPKDIVHYVRVEHDLSISYQKAWRAREAALDETRGSSKDSYKMVAKFAYMLNLNNPGSIV 79
           TPKDI   +  E+ + ++Y +AWRA+EAAL+  RG    SY  +  + ++L    PGS +
Sbjct: 277 TPKDIQRDMLAEYGVRLTYMQAWRAKEAALELIRGDPIQSYAKLPSYFHILEATYPGSHI 336

Query: 80  EYRLDVDGRFLYFFMALYASIAAWQHCRPVISIDETSMK----------NNPDANDQILP 139
            +    D RFLY F+AL+ SI  W++CRP++ +D T +K          N  DA   ILP
Sbjct: 337 RFHKSEDDRFLYAFVALFTSIKGWEYCRPIVVVDGTFLKGAYKGTLLTANTLDAAGSILP 396

Query: 140 LVFCVIDSENDASWTWFCNQLKRIIGCRNDIVIVSYRHKSICKAIEVVFPNVLHCMCMVH 199
           L + ++DSEND+SW WF  Q +   G R ++ IVS RH SI KA+  V+  V H  CM H
Sbjct: 397 LAYAIVDSENDSSWGWFFEQFRDAFGQRPEMCIVSDRHASIIKAVSTVYDEVPHFACMWH 456

Query: 200 LLRNLKLKYR---SIVNTMFHACGKTYNVVDFEQEMRLLESNAPGIREELQSIGFLRWSR 259
           LL+N+   +R     V  +F++  KTY + +F Q M ++E     I++ L +IG+ +WSR
Sbjct: 457 LLQNIMKNFRRSQQRVTELFYSMAKTYTMTEFNQCMTMVEKIDKRIKDYLLNIGYNKWSR 516

Query: 260 AYLLLSRYNVMTTNISESLNNAIIKARELPICSMLEV----------------------- 319
            +  ++R  +MT+NI+ES+N+    A+ L +  +LE                        
Sbjct: 517 VHAEVNRTWMMTSNIAESVNSRTRHAKVLTVLQLLEFMRQLVQKWNNNNRSKATFSGFHL 576

Query: 320 ----------NPVNNMKYQVIHGTSQYVVYLPSKI-----------CTCRMLDILQIPCA 379
                     N   + K +V+  T++YV  +   I           CTC    + ++PC 
Sbjct: 577 GKKYENILRRNKTASEKLKVVE-TNKYVYTVLDGITQFTVCLHQRTCTCGRFQLDELPCP 636

[Close]

BLAST of Cucsa.240900 vs. TrEMBL
Match: U5DAI0_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00832p00002090 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 4.4e-56
Identity = 134/418 (32.06%), Postives = 206/418 (49.28%), Query Frame = 1


Query: 19  STPKDIVHYVRVEHDLSISYQKAWRAREAALDETRGSSKDSYKMVAKFAYMLNLNNPGSI 78
           +T  DI   ++  + + ++Y KAWR++E A+++ RG++ DSY ++  F +M+   NPGS 
Sbjct: 36  ATAMDIKGELKYRYGIKMNYMKAWRSKEHAVNDLRGNASDSYSLIPSFLHMVEKTNPGSF 95

Query: 79  VEYRLDVDGRFLYFFMALYASIAAWQHCRPVISIDETSMKN----------NPDANDQIL 138
           V+ +   D   L+ FMAL ASI  W  CRP++ +D T +K             DA   I 
Sbjct: 96  VDLKTAEDNSLLFVFMALDASIKGWGACRPIVVVDGTFLKAAYGGTLLCACTQDAAGHIF 155

Query: 139 PLVFCVIDSENDASWTWFCNQLKRIIGCRNDIVIVSYRHKSICKAIEVVFPNVLHCMCMV 198
           PL FCV DSEND SW WF  + K   G R    ++S R++S+ KA   ++P + H  C  
Sbjct: 156 PLAFCVADSENDQSWKWFFKKFKEAYGVREHQCLISDRNESLIKAAREIYPEIAHSYCGY 215

Query: 199 HLLRNLKLKYR---SIVNTMFHACGKTYNVVDFEQEMRLLESNAPGIREELQSIGFLRWS 258
           H+L NLK  ++   +  N  F    K Y    FE  M  L+     IR  L+ IG+ +WS
Sbjct: 216 HILSNLKTSFKQHAAKYNLPFFGAVKAYTEKQFEFHMAELDGLDKRIRPYLKKIGYEKWS 275

Query: 259 RAYLLLSRYNVMTTNISESLNNAIIKARELPICSMLE----------------------- 318
           R +    RY+ MT+NISESLN A + ARELPI ++LE                       
Sbjct: 276 RIHSQNKRYSTMTSNISESLNAANLAARELPITTLLECLRALVQQWTHTNRTKAHNTFTK 335

Query: 319 VNP------VNNMKYQV---IHGTSQYV-----------VYLPSKICTCRMLDILQIPCA 378
           ++P      + N  Y +   +  T+ Y+           V L  + CTC    I ++PC 
Sbjct: 336 LSPTGEDILLKNYTYSLNLEVKATTDYLFEVTRMKESWEVDLEKRTCTCNRFQIDEMPCG 395

[Close]

BLAST of Cucsa.240900 vs. TrEMBL
Match: U5D175_AMBTC (Uncharacterized protein (Fragment) OS=Amborella trichopoda GN=AMTR_s04652p00001680 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 7.8e-53
Identity = 111/276 (40.22%), Postives = 167/276 (60.51%), Query Frame = 1


Query: 20  TPKDIVHYVRVEHDLSISYQKAWRAREAALDETRGSSKDSYKMVAKFAYMLNLNNPGSIV 79
           TP+DI   ++ ++ + ++Y KAWR++E A +E RG + +SY+++  F +ML   NPG+IV
Sbjct: 213 TPQDIRGEMKHKYGVRMNYMKAWRSKEHAQEELRGKANESYRLLPGFLHMLQKTNPGTIV 272

Query: 80  EYRLDVDGRFLYFFMALYASIAAWQHCRPVISIDETSMKN----------NPDANDQILP 139
               + D  F Y F+AL ASI  W+ C+P+I +D T +K+            DAN  I P
Sbjct: 273 HMETEDDNSFKYLFVALDASIKGWKKCKPIIVVDGTFLKSTYGGTLLSACTQDANGHIFP 332

Query: 140 LVFCVIDSENDASWTWFCNQLKRIIGCRNDIVIVSYRHKSICKAIEVVFPNVLHCMCMVH 199
           L F V+DSEN+ SW WF  +++   G R +  ++S RH+SI KA   VFP + HC C+ H
Sbjct: 333 LAFSVVDSENNNSWQWFFTKVRETYGIREEQCLISDRHESISKAACQVFPEITHCYCVYH 392

Query: 200 LLRNLKLKYR---SIVNTMFHACGKTYNVVDFEQEMRLLESNAPGIREELQSIGFLRWSR 259
           LL NLK  ++   S ++  F A  + Y    FE  M  L+S    +R  LQ +G+ +WSR
Sbjct: 393 LLSNLKATFKKNASKLDKPFFAAARAYTERKFEYHMSELDSLDIRVRPYLQQVGYHKWSR 452

Query: 260 AYLLLSRYNVMTTNISESLNNAIIKARELPICSMLE 283
            +   +RY+ MT+NI+ESLN A + ARELPI +++E
Sbjct: 453 YHCKNNRYSTMTSNIAESLNAANLAARELPITTLME 488

[Close]

BLAST of Cucsa.240900 vs. NCBI nr
Match: gi|659096610|ref|XP_008449188.1| (PREDICTED: uncharacterized protein LOC103491139 [Cucumis melo])

HSP 1 Score: 414.5 bits (1064), Expect = 2.1e-112
Identity = 203/291 (69.76%), Postives = 237/291 (81.44%), Query Frame = 1


Query: 1   MVIKDLIKNKISLAGSELSTPKDIVHYVRVEHDLSISYQKAWRAREAALDETRGSSKDSY 60
           +VI DL KNKISL GS+LS PKDIVH++RVEHDLSISYQKAWR REAA D+  GS +DSY
Sbjct: 59  IVINDLFKNKISLVGSKLSIPKDIVHFIRVEHDLSISYQKAWRVREAAFDDFCGSLEDSY 118

Query: 61  KMVAKFAYMLNLNNPGSIVEYRLDVDGRFLYFFMALYASIAAWQHCRPVISIDETSMKNN 120
           KM+ +FA++L LNNPGS+VEY++D + RFLY FM L  SI+ WQHCRPVISID TS+KNN
Sbjct: 119 KMLPRFAHILELNNPGSVVEYKVDANDRFLYLFMTLSTSISGWQHCRPVISIDGTSLKNN 178

Query: 121 --------PDANDQILPLVFCVIDSENDASWTWFCNQLKRIIGCRNDIVIVSYRHKSICK 180
                   PDANDQI  L FCV+D END+SWT FCNQLKRIIG RN++VIVS  HKSICK
Sbjct: 179 GTLFSASTPDANDQIFSLAFCVVDYENDSSWTRFCNQLKRIIGGRNEVVIVSDIHKSICK 238

Query: 181 AIEVVFPNVLHCMCMVHLLRNLKLKYRSIVNTMFHACGKTYNVVDFEQEMRLLESNAPGI 240
            IEVVFPNVLHCMC+VHLLRNLKLKY+ IV+T+FH C K +N++DFE EM  LES A GI
Sbjct: 239 VIEVVFPNVLHCMCLVHLLRNLKLKYKRIVDTVFHVCEKAFNIIDFEHEMHWLESFAFGI 298

Query: 241 REELQSIGFLRWSRAYLLLSRYNVMTTNISESLNNAIIKARELPICSMLEV 284
           RE+L+SIGF +W  AY    RYNVMTTNIS+S N+A++KA ELPICSMLEV
Sbjct: 299 REKLESIGFAKWFGAYSPRRRYNVMTTNISKSSNSAMLKAGELPICSMLEV 349

[Close]

BLAST of Cucsa.240900 vs. NCBI nr
Match: gi|659098556|ref|XP_008450197.1| (PREDICTED: uncharacterized protein LOC103491857 [Cucumis melo])

HSP 1 Score: 353.6 bits (906), Expect = 4.5e-94
Identity = 183/285 (64.21%), Postives = 217/285 (76.14%), Query Frame = 1


Query: 2   VIKDLIKNKISLAGSELSTPKDIVHYVRVEHDLSISYQKAWRAREAALDETRGSSKDSYK 61
           VIKDLI+NKISLAGSELSTPKDIVH++R EH LSISYQKAWRA E ALD+   S KDSYK
Sbjct: 43  VIKDLIRNKISLAGSELSTPKDIVHFIRSEHGLSISYQKAWRACEVALDDIHESPKDSYK 102

Query: 62  MVAKFAYMLNLNNPGSIVEYRLDVDGRFL---YFFMALYASIAAWQHCRPVISIDETSMK 121
           ++ KFAY+L LNNP       + +DG  L   Y    L AS                   
Sbjct: 103 ILPKFAYILKLNNP------IISIDGTSLKNKYGGTLLSAS------------------- 162

Query: 122 NNPDANDQILPLVFCVIDSENDASWTWFCNQLKRIIGCRNDIVIVSYRHKSICKAIEVVF 181
             PDANDQI PL  CV+DS+ND+   WF NQLKRIIG RN++VI+S RHKSICKAIE+VF
Sbjct: 163 -TPDANDQIFPLALCVVDSKNDSPLIWFWNQLKRIIGGRNEVVIISDRHKSICKAIEIVF 222

Query: 182 PNVLHCMCMVHLLRNLKLKYRSIVNTMFHACGKTYNVVDFEQEMRLLESNAPGIREELQS 241
           P+VLHC+C+VHLLRNLKLKY+ I++ +FH+CGK +N+VDF+ +MRLLES+APGIREEL+S
Sbjct: 223 PDVLHCICLVHLLRNLKLKYKRIMDIVFHSCGKAFNIVDFKHKMRLLESSAPGIREELES 282

Query: 242 IGFLRWSRAYLLLSRYNVMTTNISESLNNAIIKARELPICSMLEV 284
           IGF +WSRAY    RYNVMTTNISESLN+A++KAREL ICSMLEV
Sbjct: 283 IGFAKWSRAYSPRRRYNVMTTNISESLNSAMLKARELSICSMLEV 301

[Close]

BLAST of Cucsa.240900 vs. NCBI nr
Match: gi|659102492|ref|XP_008452162.1| (PREDICTED: uncharacterized protein LOC103493267 [Cucumis melo])

HSP 1 Score: 349.4 bits (895), Expect = 8.4e-93
Identity = 183/292 (62.67%), Postives = 216/292 (73.97%), Query Frame = 1


Query: 2   VIKDLIKNKISLAGSELSTPKDIVHYVRVEHDLSISYQKAWRAREAALDETRGSSKDSYK 61
           VIKDLIKNKI LAGS+LSTPKDIVH++  EH LSI YQKAWRAR AALD+ R        
Sbjct: 160 VIKDLIKNKIFLAGSKLSTPKDIVHFICGEHGLSIFYQKAWRARGAALDDIRD------- 219

Query: 62  MVAKFAYMLNLNNPGSIVEYRLDVDGRFLYFFMALYASIAAWQHCRPVISIDETSMKNN- 121
                  +L      S++EY++D  GRFLYFFM L ASI+  QHCR VISI+ETS+KN  
Sbjct: 220 -------LLRTPTRCSVIEYKVDAGGRFLYFFMTLSASISGCQHCRLVISINETSLKNKY 279

Query: 122 ---------PDANDQILPLVFCVIDSENDASWTWFCNQLKRIIGCRNDIVIVSYRHKSIC 181
                    PD+ND I PL FCV+DSEND+SWTWFCNQLKRIIG RND+VIVS RH+SIC
Sbjct: 280 DGTLLSASTPDSNDHIFPLAFCVVDSENDSSWTWFCNQLKRIIGERNDVVIVSDRHRSIC 339

Query: 182 KAIEVVFPNVLHCMCMVHLLRNLKLKYRSIVNTMFHACGKTYNVVDFEQEMRLLESNAPG 241
           KAI                 +NLKLKY+ IV+T+FH+CGKT+N+VDFE +MRLLES+APG
Sbjct: 340 KAI-----------------KNLKLKYKRIVDTVFHSCGKTFNIVDFEHKMRLLESSAPG 399

Query: 242 IREELQSIGFLRWSRAYLLLSRYNVMTTNISESLNNAIIKARELPICSMLEV 284
           IRE+L+SI F +WSRAY    RYNVMTTNISESLN+A++KARELPICSML+V
Sbjct: 400 IREKLESIDFAKWSRAYSPRMRYNVMTTNISESLNSAMLKARELPICSMLKV 420

[Close]

BLAST of Cucsa.240900 vs. NCBI nr
Match: gi|659130612|ref|XP_008465258.1| (PREDICTED: uncharacterized protein LOC103502914 [Cucumis melo])

HSP 1 Score: 340.5 bits (872), Expect = 3.9e-90
Identity = 175/261 (67.05%), Postives = 202/261 (77.39%), Query Frame = 1


Query: 23  DIVHYVRVEHDLSISYQKAWRAREAALDETRGSSKDSYKMVAKFAYMLNLNNPGSIVEYR 82
           DI HY+RVEH LSI YQKAWRA +AALDE +GSS DSYKM+++FAY+L LNN G +VEY+
Sbjct: 11  DIFHYIRVEHGLSIFYQKAWRAHKAALDEIQGSSGDSYKMISQFAYILELNNLGFVVEYK 70

Query: 83  LDVDGRFLYFFMALYASIAAWQHCRPVISIDETSMKNNPDANDQILPLVFCVIDSENDAS 142
           +D D RFLYFFMAL ASI+ WQHCRPVISIDETS+KNN        P             
Sbjct: 71  VDADDRFLYFFMALSASISGWQHCRPVISIDETSLKNNYGGALLSAPTP----------- 130

Query: 143 WTWFCNQLKRIIGCRNDIVIVSYRHKSICKAIEVVFPNVLHCMCMVHLLRNLKLKYRSIV 202
                    RIIG RN++ IV  RHKSICKAIEVVFPNVLHCM +VHLLRNLKLKY+ IV
Sbjct: 131 --------DRIIGDRNEVDIVFNRHKSICKAIEVVFPNVLHCMYLVHLLRNLKLKYKRIV 190

Query: 203 NTMFHACGKTYNVVDFEQEMRLLESNAPGIREELQSIGFLRWSRAYLLLSRYNVMTTNIS 262
           +T+ +ACGKT+N+VD E EMRLLES+ PGIREEL+SIGF  WSR+Y   SRYNVMTTNIS
Sbjct: 191 DTISYACGKTFNIVDIEHEMRLLESSVPGIREELESIGFANWSRSYSPHSRYNVMTTNIS 250

Query: 263 ESLNNAIIKARELPICSMLEV 284
           ESLN+A++KARELPI SMLEV
Sbjct: 251 ESLNSAMLKARELPIYSMLEV 252

[Close]

BLAST of Cucsa.240900 vs. NCBI nr
Match: gi|659072256|ref|XP_008464510.1| (PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo])

HSP 1 Score: 334.7 bits (857), Expect = 2.1e-88
Identity = 171/265 (64.53%), Postives = 203/265 (76.60%), Query Frame = 1


Query: 1   MVIKDLIKNKISLAGSELSTPKDIVHYVRVEHDLSISYQKAWRAREAALDETRGSSKDSY 60
           +VIKDLIKNKISLAGS+LSTPKDIVH++R EH L+ISYQKAWR REAALD+   S +DSY
Sbjct: 53  IVIKDLIKNKISLAGSKLSTPKDIVHFIRAEHGLNISYQKAWRTREAALDDIHRSLEDSY 112

Query: 61  KMVAKFAYMLNLNNPGSIVEYRLDVDGRFLYFFMALYASIAAWQHCRPVISIDETSMKNN 120
           KM++ FAY+L LNNP S+VEY++D D                      VISIDETS+KN 
Sbjct: 113 KMLSIFAYILELNNPCSVVEYKVDTD----------------------VISIDETSLKNK 172

Query: 121 P----------DANDQILPLVFCVIDSENDASWTWFCNQLKRIIGCRNDIVIVSYRHKSI 180
                      DAND+I PL F V+DSEND+SWTWFCNQLKRIIG +N++VIVS R KSI
Sbjct: 173 YGDTLLSASTLDANDKIFPLAFYVVDSENDSSWTWFCNQLKRIIGGQNEVVIVSDRRKSI 232

Query: 181 CKAIEVVFPNVLHCMCMVHLLRNLKLKYRSIVNTMFHACGKTYNVVDFEQEMRLLESNAP 240
           CKAIEVVFPNVLHC+C+VHLLRNLKLKY+ IV+T+F ACGK +N+VDFE +M LLES+A 
Sbjct: 233 CKAIEVVFPNVLHCICLVHLLRNLKLKYKRIVDTVFRACGKIFNIVDFEHKMYLLESSAL 292

Query: 241 GIREELQSIGFLRWSRAYLLLSRYN 256
           GIREEL+SIGF +WSRAY    RY+
Sbjct: 293 GIREELESIGFAKWSRAYSPRRRYD 295

The following BLAST results are available for this feature:

BLAST of Cucsa.240900 vs. TrEMBL


Match Name	E-value	Identity	Description
A5B699_VITVI	4.7e-58	34.30	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042737 PE=4 SV=1	[more]
K4BII7_SOLLC	4.7e-58	33.01	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
K4CJF3_SOLLC	4.0e-57	32.78	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
U5DAI0_AMBTC	4.4e-56	32.06	Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00832p00002090 PE=4 SV=...	[more]
U5D175_AMBTC	7.8e-53	40.22	Uncharacterized protein (Fragment) OS=Amborella trichopoda GN=AMTR_s04652p000016...	[more]

BLAST of Cucsa.240900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096610\|ref\|XP_008449188.1\|	2.1e-112	69.76	PREDICTED: uncharacterized protein LOC103491139 [Cucumis melo]	[more]
gi\|659098556\|ref\|XP_008450197.1\|	4.5e-94	64.21	PREDICTED: uncharacterized protein LOC103491857 [Cucumis melo]	[more]
gi\|659102492\|ref\|XP_008452162.1\|	8.4e-93	62.67	PREDICTED: uncharacterized protein LOC103493267 [Cucumis melo]	[more]
gi\|659130612\|ref\|XP_008465258.1\|	3.9e-90	67.05	PREDICTED: uncharacterized protein LOC103502914 [Cucumis melo]	[more]
gi\|659072256\|ref\|XP_008464510.1\|	2.1e-88	64.53	PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007527	Znf_SWIM
IPR018289	MULE_transposase_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.240900.1	Cucsa.240900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007527	Zinc finger, SWIM-type	PROFILE	PS50966	ZF_SWIM	coord: 300..332 score: 9
IPR018289	MULE transposase domain	PFAM	PF10551	MULE	coord: 122..193 score: 2.5
None	No IPR available	PANTHER	PTHR31973	FAMILY NOT NAMED	coord: 20..378 score: 3.6
None	No IPR available	PANTHER	PTHR31973:SF0	SUBFAMILY NOT NAMED	coord: 20..378 score: 3.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.240900	CsaV3_7G024100	Cucumber (Chinese Long) v3	cgycucB367

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.240900	Cucurbita maxima (Rimu)	cgycmaB0670
Cucsa.240900	Cucurbita moschata (Rifu)	cgycmoB0670
Cucsa.240900	Wild cucumber (PI 183967)	cgycpiB364
Cucsa.240900	Cucumber (Chinese Long) v2	cgycuB348
Cucsa.240900	Melon (DHL92) v3.5.1	cgymeB410
Cucsa.240900	Watermelon (Charleston Gray)	cgywcgB424
Cucsa.240900	Watermelon (97103) v1	cgywmB452
Cucsa.240900	Watermelon (97103) v1	cgywmB454
Cucsa.240900	Bottle gourd (USVL1VR-Ls)	cgylsiB399
Cucsa.240900	Melon (DHL92) v3.6.1	cgymedB407
Cucsa.240900	Watermelon (97103) v2	cgywmbB433
Cucsa.240900	Wax gourd	cgywgoB491